View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2975_low_21 (Length: 280)
Name: NF2975_low_21
Description: NF2975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2975_low_21 |
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Alignment Details
Target: chr1 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 13850426 - 13850706
Alignment:
| Q |
1 |
aatagctcttgtaatctggaccgtctgatctcaagctaacaacaaccgatctgatgactgtgtaaatgcatggaattgccgagtgcagacaatccaaatc |
100 |
Q |
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| T |
13850426 |
aatagctcttgtaatctggacagtctgatctcaagctaacaacaaccgatctgatgactgtgtaaatgcatggaattgccgagtgcggacaatccaaatc |
13850525 |
T |
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| Q |
101 |
tttacacagct-------------ttccgaagactttctgtgtaatggttaccttgagttgttcattttctgcagtaagcttattgaccaattcattgtc |
187 |
Q |
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| T |
13850526 |
tttacacagctagagatataaattttccgaagactttctgtgtaatggttaccttgagttgttcattttctgcagtaagcttattgaccaattcattgtc |
13850625 |
T |
|
| Q |
188 |
aacaacatgattttcctgtataattggagtttgctcagctacattctttgcagcgtcacgttcctgaatgagttgcgcctt |
268 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13850626 |
aacaacatgattttcctgtataattggagtttgctcagctacattctttgcagcgtcacgttcctgaatgagttgcgcctt |
13850706 |
T |
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