View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2975_low_38 (Length: 227)
Name: NF2975_low_38
Description: NF2975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2975_low_38 |
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Alignment Details
Target: chr2 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 6 - 203
Target Start/End: Complemental strand, 7506480 - 7506286
Alignment:
| Q |
6 |
aactcacacaatgtaggagccgatattcgaatcccgatcacgtatttgacctaacaatttgtgtatttttccagttgaactaactaggacttctggacca |
105 |
Q |
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| T |
7506480 |
aactcacacaatgtaggagtcggtattcgaatctcgattacgcgtttgacctaacaatttgtgtatttttccagttgaactaactaggacttctggacct |
7506381 |
T |
|
| Q |
106 |
ccaatgcttattttaacaaaaagaaattgagccattaattttcattaatattaatattccattattctttgttctcatttctcagagaagcaaagaga |
203 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7506380 |
---atgcttattttaacaaaaagaaattgagccatcaattttcattaatattaatattccattattctttgttctcatttctcagagaagcaaagaga |
7506286 |
T |
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