View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2977_high_15 (Length: 251)

Name: NF2977_high_15
Description: NF2977
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2977_high_15
NF2977_high_15
[»] chr1 (36 HSPs)
chr1 (1-232)||(34536062-34536295)
chr1 (21-81)||(4033970-4034030)
chr1 (22-78)||(42336675-42336731)
chr1 (28-80)||(49692012-49692064)
chr1 (25-80)||(38170647-38170702)
chr1 (21-68)||(43371844-43371891)
chr1 (22-80)||(44422757-44422815)
chr1 (11-76)||(4868462-4868526)
chr1 (11-80)||(27140536-27140605)
chr1 (11-76)||(32515384-32515449)
chr1 (19-80)||(43420316-43420377)
chr1 (11-75)||(4757401-4757465)
chr1 (1-60)||(1393021-1393080)
chr1 (21-80)||(4768782-4768841)
chr1 (11-80)||(17631047-17631114)
chr1 (11-73)||(51929405-51929467)
chr1 (35-72)||(5591933-5591970)
chr1 (11-79)||(38867776-38867842)
chr1 (11-75)||(28467252-28467316)
chr1 (49-80)||(11639397-11639428)
chr1 (21-80)||(17420261-17420320)
chr1 (13-80)||(27807173-27807240)
chr1 (11-74)||(28837296-28837358)
chr1 (18-80)||(35669030-35669090)
chr1 (30-72)||(2295163-2295205)
chr1 (21-75)||(4576868-4576922)
chr1 (18-68)||(11448204-11448254)
chr1 (21-75)||(33723335-33723389)
chr1 (30-80)||(37811910-37811960)
chr1 (30-80)||(38001654-38001704)
chr1 (1-70)||(5157140-5157209)
chr1 (11-76)||(15581316-15581381)
chr1 (13-78)||(23373258-23373323)
chr1 (20-69)||(49282665-49282713)
chr1 (24-80)||(6262078-6262134)
chr1 (32-80)||(23407489-23407537)
[»] chr4 (46 HSPs)
chr4 (1-80)||(2996631-2996710)
chr4 (11-80)||(55870285-55870354)
chr4 (11-70)||(18628496-18628555)
chr4 (18-75)||(46090764-46090821)
chr4 (22-70)||(4071946-4071994)
chr4 (11-79)||(8328062-8328130)
chr4 (1-81)||(29375960-29376040)
chr4 (22-80)||(6428076-6428134)
chr4 (21-75)||(7368007-7368061)
chr4 (28-76)||(27123312-27123360)
chr4 (11-78)||(3549498-3549565)
chr4 (30-104)||(52172760-52172833)
chr4 (27-80)||(1408279-1408332)
chr4 (11-72)||(39178209-39178270)
chr4 (11-63)||(22471349-22471401)
chr4 (18-78)||(25583652-25583712)
chr4 (14-62)||(44320025-44320073)
chr4 (1-57)||(46859999-46860055)
chr4 (27-82)||(4691904-4691959)
chr4 (11-70)||(22523748-22523807)
chr4 (30-69)||(25904184-25904223)
chr4 (1-80)||(54277256-54277335)
chr4 (30-80)||(6987703-6987753)
chr4 (22-80)||(19429466-19429524)
chr4 (30-80)||(23819147-23819197)
chr4 (21-75)||(46247268-46247322)
chr4 (22-80)||(50742790-50742848)
chr4 (23-80)||(1137770-1137827)
chr4 (11-76)||(2841688-2841753)
chr4 (11-80)||(7730658-7730727)
chr4 (11-80)||(10365833-10365902)
chr4 (11-80)||(19304984-19305053)
chr4 (27-80)||(25896842-25896895)
chr4 (11-80)||(32071926-32071990)
chr4 (11-80)||(33534112-33534181)
chr4 (20-73)||(49893381-49893434)
chr4 (30-67)||(49940128-49940165)
chr4 (11-80)||(50298574-50298642)
chr4 (12-44)||(1017122-1017154)
chr4 (33-73)||(2236945-2236985)
chr4 (24-76)||(3176060-3176112)
chr4 (26-78)||(4449061-4449113)
chr4 (28-72)||(21043195-21043239)
chr4 (36-80)||(27725272-27725316)
chr4 (21-73)||(28615400-28615451)
chr4 (25-77)||(29373866-29373918)
[»] chr6 (32 HSPs)
chr6 (15-78)||(32171330-32171393)
chr6 (11-78)||(8420140-8420207)
chr6 (22-80)||(32917255-32917313)
chr6 (11-80)||(27857416-27857485)
chr6 (11-80)||(33737628-33737697)
chr6 (11-80)||(34939802-34939871)
chr6 (28-76)||(2460111-2460159)
chr6 (21-73)||(2735135-2735187)
chr6 (11-80)||(769196-769265)
chr6 (22-80)||(34538172-34538230)
chr6 (33-82)||(7490415-7490464)
chr6 (11-80)||(10031790-10031859)
chr6 (13-78)||(11600819-11600884)
chr6 (15-80)||(30863304-30863369)
chr6 (21-77)||(32577939-32577995)
chr6 (13-80)||(2263250-2263317)
chr6 (13-80)||(2732192-2732259)
chr6 (29-80)||(3738127-3738178)
chr6 (14-73)||(8147012-8147071)
chr6 (20-71)||(10353713-10353764)
chr6 (21-80)||(33500433-33500492)
chr6 (11-69)||(738484-738542)
chr6 (6-80)||(33385587-33385661)
chr6 (20-77)||(725607-725664)
chr6 (11-80)||(4325248-4325317)
chr6 (21-62)||(31668433-31668474)
chr6 (27-80)||(33116642-33116695)
chr6 (27-80)||(34544103-34544156)
chr6 (20-80)||(3775080-3775140)
chr6 (20-80)||(29040114-29040174)
chr6 (28-80)||(32976036-32976088)
chr6 (24-76)||(33498681-33498733)
[»] chr7 (32 HSPs)
chr7 (18-80)||(33894685-33894747)
chr7 (11-75)||(25670529-25670593)
chr7 (11-76)||(20547333-20547398)
chr7 (11-72)||(34754753-34754814)
chr7 (29-80)||(27626084-27626135)
chr7 (18-75)||(22387846-22387903)
chr7 (21-80)||(13960676-13960735)
chr7 (21-80)||(23214913-23214972)
chr7 (25-80)||(29574582-29574637)
chr7 (21-80)||(36537966-36538025)
chr7 (1-80)||(36598289-36598368)
chr7 (21-75)||(8094369-8094423)
chr7 (12-70)||(12242312-12242370)
chr7 (11-76)||(33645903-33645969)
chr7 (11-67)||(2221995-2222049)
chr7 (11-75)||(28727706-28727770)
chr7 (15-75)||(43250647-43250706)
chr7 (21-80)||(7453350-7453409)
chr7 (29-80)||(28340382-28340432)
chr7 (33-80)||(31002998-31003045)
chr7 (21-80)||(46223026-46223085)
chr7 (22-80)||(29287285-29287342)
chr7 (22-79)||(17759585-17759642)
chr7 (39-76)||(30134111-30134148)
chr7 (18-75)||(30535626-30535683)
chr7 (6-79)||(44686989-44687062)
chr7 (11-56)||(47041982-47042027)
chr7 (30-70)||(20526890-20526930)
chr7 (21-65)||(28165164-28165208)
chr7 (20-80)||(28691788-28691847)
chr7 (15-79)||(28844549-28844613)
chr7 (20-68)||(36203149-36203197)
[»] chr8 (37 HSPs)
chr8 (21-80)||(16162818-16162877)
chr8 (18-79)||(21130671-21130732)
chr8 (11-80)||(31915236-31915305)
chr8 (21-80)||(11569410-11569469)
chr8 (21-80)||(31875548-31875607)
chr8 (1-80)||(39881654-39881733)
chr8 (21-79)||(34770927-34770985)
chr8 (11-75)||(30191084-30191148)
chr8 (12-75)||(2487952-2488015)
chr8 (21-68)||(7918734-7918781)
chr8 (21-80)||(9700059-9700118)
chr8 (21-80)||(14949924-14949983)
chr8 (30-80)||(30987953-30988003)
chr8 (14-80)||(12851234-12851302)
chr8 (31-75)||(4251019-4251063)
chr8 (18-78)||(26410340-26410400)
chr8 (11-62)||(8060745-8060795)
chr8 (11-70)||(24326099-24326158)
chr8 (49-80)||(29168646-29168677)
chr8 (21-80)||(29169889-29169948)
chr8 (30-73)||(30918177-30918220)
chr8 (21-76)||(39049334-39049389)
chr8 (1-72)||(43208089-43208160)
chr8 (18-69)||(43908650-43908701)
chr8 (30-72)||(26771332-26771374)
chr8 (22-68)||(33940088-33940134)
chr8 (30-72)||(35534574-35534616)
chr8 (6-76)||(45071436-45071506)
chr8 (11-80)||(1561335-1561404)
chr8 (11-76)||(6950384-6950449)
chr8 (22-79)||(8558719-8558776)
chr8 (36-73)||(10120822-10120859)
chr8 (21-57)||(1664450-1664486)
chr8 (30-74)||(8629520-8629564)
chr8 (28-80)||(11415212-11415264)
chr8 (11-47)||(12833451-12833487)
chr8 (11-75)||(43368643-43368707)
[»] chr5 (33 HSPs)
chr5 (1-60)||(12407663-12407722)
chr5 (11-80)||(11095438-11095507)
chr5 (11-71)||(5377140-5377200)
chr5 (11-80)||(11457156-11457225)
chr5 (15-76)||(10907440-10907501)
chr5 (11-76)||(11297139-11297204)
chr5 (18-82)||(12459951-12460015)
chr5 (44-80)||(13604825-13604861)
chr5 (28-80)||(37611175-37611227)
chr5 (28-80)||(37787905-37787957)
chr5 (28-80)||(38047839-38047891)
chr5 (21-80)||(2569648-2569707)
chr5 (13-76)||(4273322-4273385)
chr5 (21-80)||(10152392-10152451)
chr5 (33-76)||(14295568-14295611)
chr5 (41-80)||(14364280-14364319)
chr5 (29-72)||(15905361-15905404)
chr5 (21-80)||(32172711-32172770)
chr5 (11-74)||(38728466-38728529)
chr5 (30-72)||(16457940-16457982)
chr5 (22-80)||(19177046-19177104)
chr5 (50-80)||(21768179-21768209)
chr5 (11-57)||(21782599-21782645)
chr5 (21-79)||(26516466-26516524)
chr5 (11-69)||(29336699-29336757)
chr5 (18-80)||(40534257-40534319)
chr5 (18-75)||(499681-499738)
chr5 (18-55)||(4855778-4855815)
chr5 (11-68)||(13244494-13244551)
chr5 (11-80)||(13605316-13605385)
chr5 (11-80)||(25720360-25720429)
chr5 (30-75)||(37526161-37526206)
chr5 (30-75)||(37690598-37690643)
[»] chr3 (48 HSPs)
chr3 (21-80)||(44014751-44014810)
chr3 (11-80)||(21872238-21872307)
chr3 (28-80)||(25182947-25182999)
chr3 (11-75)||(50015949-50016013)
chr3 (6-80)||(24624268-24624342)
chr3 (6-60)||(47584528-47584582)
chr3 (11-80)||(20192549-20192618)
chr3 (11-80)||(43115114-43115183)
chr3 (20-79)||(1810036-1810095)
chr3 (24-75)||(2100135-2100186)
chr3 (12-79)||(2413623-2413690)
chr3 (21-80)||(37273192-37273251)
chr3 (11-74)||(40880891-40880954)
chr3 (27-73)||(14548680-14548726)
chr3 (11-73)||(22667468-22667530)
chr3 (11-73)||(22724107-22724169)
chr3 (11-76)||(20210871-20210936)
chr3 (15-76)||(30923846-30923906)
chr3 (28-80)||(659820-659872)
chr3 (27-75)||(2175808-2175856)
chr3 (21-73)||(20194986-20195038)
chr3 (11-75)||(38971321-38971385)
chr3 (33-80)||(21574548-21574595)
chr3 (17-80)||(27290850-27290913)
chr3 (18-49)||(31762353-31762384)
chr3 (29-80)||(34707457-34707508)
chr3 (1-80)||(41724270-41724349)
chr3 (21-80)||(49772621-49772680)
chr3 (30-80)||(11039301-11039351)
chr3 (22-80)||(24281105-24281163)
chr3 (1-79)||(31710820-31710898)
chr3 (1-79)||(31711075-31711153)
chr3 (22-76)||(34383004-34383058)
chr3 (38-80)||(42817192-42817234)
chr3 (22-80)||(45541629-45541687)
chr3 (22-75)||(2152132-2152185)
chr3 (30-71)||(3776352-3776393)
chr3 (11-80)||(11040557-11040626)
chr3 (11-52)||(27294432-27294473)
chr3 (11-72)||(27792938-27792999)
chr3 (15-80)||(38975843-38975908)
chr3 (1-81)||(39971354-39971434)
chr3 (30-71)||(39980797-39980838)
chr3 (11-68)||(50211805-50211862)
chr3 (32-72)||(30443960-30444000)
chr3 (21-80)||(42530315-42530377)
chr3 (21-73)||(48807764-48807816)
chr3 (18-78)||(53735922-53735982)
[»] chr2 (41 HSPs)
chr2 (11-80)||(787390-787459)
chr2 (21-78)||(1318296-1318353)
chr2 (37-80)||(1494415-1494458)
chr2 (21-80)||(5902502-5902561)
chr2 (11-79)||(29430817-29430885)
chr2 (20-80)||(43456659-43456719)
chr2 (13-80)||(4350748-4350815)
chr2 (11-74)||(13866942-13867005)
chr2 (28-79)||(32837382-32837433)
chr2 (11-74)||(40943977-40944040)
chr2 (21-75)||(2964762-2964816)
chr2 (9-79)||(18884926-18884996)
chr2 (11-80)||(5759518-5759586)
chr2 (11-80)||(8017492-8017561)
chr2 (18-75)||(43808621-43808678)
chr2 (11-80)||(43985267-43985336)
chr2 (11-79)||(37474824-37474891)
chr2 (11-75)||(40158781-40158845)
chr2 (21-80)||(1801726-1801785)
chr2 (17-80)||(7283054-7283117)
chr2 (21-64)||(11513970-11514013)
chr2 (30-73)||(27699491-27699534)
chr2 (21-80)||(28803483-28803542)
chr2 (17-68)||(36677722-36677773)
chr2 (13-80)||(38077018-38077085)
chr2 (10-80)||(9556297-9556367)
chr2 (18-80)||(33192260-33192321)
chr2 (30-68)||(36534839-36534877)
chr2 (19-69)||(38259638-38259688)
chr2 (22-80)||(41851118-41851176)
chr2 (13-74)||(10567121-10567182)
chr2 (11-80)||(13234564-13234633)
chr2 (11-68)||(40400843-40400900)
chr2 (15-80)||(44606057-44606122)
chr2 (28-80)||(6993684-6993736)
chr2 (28-80)||(9478357-9478409)
chr2 (28-80)||(11344730-11344782)
chr2 (33-73)||(32106764-32106804)
chr2 (28-80)||(33256798-33256850)
chr2 (28-80)||(34651996-34652048)
chr2 (20-80)||(43065402-43065462)
[»] scaffold0311 (1 HSPs)
scaffold0311 (18-80)||(10567-10629)
[»] scaffold0428 (1 HSPs)
scaffold0428 (1-80)||(3964-4043)
[»] scaffold0072 (1 HSPs)
scaffold0072 (51-80)||(5017-5046)
[»] scaffold0199 (1 HSPs)
scaffold0199 (21-57)||(6891-6927)


Alignment Details
Target: chr1 (Bit Score: 194; Significance: 1e-105; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 34536295 - 34536062
Alignment:
Q  1 tattggaacgtatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccatatgagcaaatgaaaaca--ac 98  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  34536295 tatttgaacgtatctattgacataaacacttgtgagactgtttgagatggcttatgaaaacagcttatgacatgtccatatgagcaaatgaaaacaacac 34536196  T
Q  99 tgataacttaaatgaaaacataaacacatatgataagcgattaataagnnnnnnnaatccaaacaagtccttaaaacagagaatgtgaaattcgaattaa 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  34536195 tgataacttaaatgaaaacataaacacatatgataagcgattaataagtttttttaatccaaacaagtccttaaaacagagaatgtgaaattcgaattaa 34536096  T
Q  199 taatcgtgaaagaacaaaggtattgtaattaaac 232  Q
    ||||||||||||||||||||||||||||||||||    
T  34536095 taatcgtgaaagaacaaaggtattgtaattaaac 34536062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 4033970 - 4034030
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccatat 81  Q
    ||||||||||||||||| ||||||||| |||||||||||| | |||||||| |||||||||    
T  4033970 cataaacacttgtgagattgtttgagagagcttatgaaaataacttatgacttgtccatat 4034030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 42336731 - 42336675
Alignment:
Q  22 ataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtcca 78  Q
    |||| |||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  42336731 ataagcacttgtgcgactgtttgagataacttatgaaaacaacttatgacatgtcca 42336675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 49692012 - 49692064
Alignment:
Q  28 acttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||||||||||||| | |||||||||| |||||||||||||||||||    
T  49692012 acttgtgagactgtttgagagaacttatgaaaatagcttatgacatgtccata 49692064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 38170647 - 38170702
Alignment:
Q  25 aacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||||||||| ||| || ||||||||||||||||||||||||||| ||||    
T  38170647 aacacttgtgagactgcttgggagagcttatgaaaacagcttatgacatgttcata 38170702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 43371844 - 43371891
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttat 68  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  43371844 cataagcacttgtgagactgtttgagagagcttatgaaaacagcttat 43371891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 44422815 - 44422757
Alignment:
Q  22 ataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||| ||||||||| || || |||||||||||| |||||||||||||||||||    
T  44422815 ataaacacttttgagactgtctgggagagcttatgaaaatagcttatgacatgtccata 44422757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 4868526 - 4868462
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtc 76  Q
    ||||||||||||||  ||||||||||||||||||||| || ||||| ||||| |||||||||||||    
T  4868526 tatctattgacataggcacttgtgagactgtttgagagagtttatg-aaacaacttatgacatgtc 4868462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 27140605 - 27140536
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||||||||||| |||| || || ||||||| || ||| | |||||||||||||||||||||||    
T  27140605 tatctattgacataaacaattgtaagtctctttgagagagtttaaggaaacagcttatgacatgtccata 27140536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 32515384 - 32515449
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtc 76  Q
    |||||| | |||||| |||||||||||||||||| || |||||||| ||||||| |||||||||||    
T  32515384 tatctactaacataagcacttgtgagactgtttgggagagcttatggaaacagcgtatgacatgtc 32515449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 43420377 - 43420316
Alignment:
Q  19 gacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||||||||||||||| ||| || | |||||| |||||||||||||||||| ||||    
T  43420377 gacataaacacttgtgagactgcttgtgagatcttatggaaacagcttatgacatgttcata 43420316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 4757465 - 4757401
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgt 75  Q
    ||||||||||||||||||||||||||||  ||||  | | |||||||||||| ||||||||||||    
T  4757465 tatctattgacataaacacttgtgagaccatttggcagaacttatgaaaacaacttatgacatgt 4757401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 1393021 - 1393080
Alignment:
Q  1 tattggaacgtatctattgacataaacacttgtgagactgtttgagatagcttatgaaaa 60  Q
    |||| |||| ||||| |||||||||||||||||||||  |||||||| ||||||||||||    
T  1393021 tatttgaacttatcttttgacataaacacttgtgagagggtttgagagagcttatgaaaa 1393080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 4768782 - 4768841
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||||||||||| ||||| || | |||| |||||||||||| ||||||||||||    
T  4768782 cataaacacttgtgagacagtttgggaaaacttacgaaaacagcttacgacatgtccata 4768841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 17631047 - 17631114
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||||||||||||| | ||||| || ||||  ||||||| ||||| |||||||||||||||||    
T  17631047 tatctattgacataaacacttcttagactcttagaga--gcttatggaaacaacttatgacatgtccata 17631114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 51929405 - 51929467
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacat 73  Q
    |||||| |||||||| ||| ||||| ||||||| ||| | |||||||||||||||||||||||    
T  51929405 tatctactgacataagcacctgtgacactgtttaagagaacttatgaaaacagcttatgacat 51929467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 72
Target Start/End: Original strand, 5591933 - 5591970
Alignment:
Q  35 agactgtttgagatagcttatgaaaacagcttatgaca 72  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  5591933 agactgtttgagagagcttatgaaaacagcttatgaca 5591970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 38867776 - 38867842
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccat 79  Q
    |||||| ||||||||||||||||||  |||||||||| |||||||| ||| | ||||||| ||||||||    
T  38867776 tatctaatgacataaacacttgtga--ctgtttgagagagcttatggaaataacttatgatatgtccat 38867842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 28467252 - 28467316
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgt 75  Q
    |||||||||||| |||||||||||| |||||||| || |||||||| ||| |||| ||| |||||    
T  28467252 tatctattgacacaaacacttgtgaaactgtttgggagagcttatggaaatagctcatggcatgt 28467316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 80
Target Start/End: Original strand, 11639397 - 11639428
Alignment:
Q  49 agcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||||||||||||||||||||||||    
T  11639397 agcttatgaaaacagcttatgacatgtccata 11639428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 17420320 - 17420261
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||||| |||||||||   | |||||||||||||| ||||| |||||||||||    
T  17420320 cataaacacttgttagactgttttgaagagcttatgaaaacaacttattacatgtccata 17420261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 27807240 - 27807173
Alignment:
Q  13 tctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||| |||||||| || |||| ||||||||||||| ||||||||||| ||||| ||||| ||| ||||    
T  27807240 tctactgacataagcatttgtaagactgtttgagagagcttatgaaagcagctgatgacgtgttcata 27807173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 28837296 - 28837358
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatg 74  Q
    |||||| |||||||| |||||| |||||||||| ||| | |||| |||||||||||||||||||    
T  28837296 tatctactgacataagcacttgagagactgtttaagaga-cttacgaaaacagcttatgacatg 28837358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 35669090 - 35669030
Alignment:
Q  18 tgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||| || ||||||||||||||  | ||||||||| |||||||||| |||||||||    
T  35669090 tgacataaacaattatgagactgtttgag--aacttatgaaagcagcttatgatatgtccata 35669030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 72
Target Start/End: Complemental strand, 2295205 - 2295163
Alignment:
Q  30 ttgtgagactgtttgagatagcttatgaaaacagcttatgaca 72  Q
    ||||||||||||||| || | ||||||||||||||||||||||    
T  2295205 ttgtgagactgtttgggagaacttatgaaaacagcttatgaca 2295163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 4576922 - 4576868
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgt 75  Q
    |||||||||||| | |||||||||||| | |||||||||| || |||||||||||    
T  4576922 cataaacacttgcgggactgtttgagacaacttatgaaaatagtttatgacatgt 4576868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 11448254 - 11448204
Alignment:
Q  18 tgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttat 68  Q
    |||||||| ||| |||| || |||||||||||||||||||||| |||||||    
T  11448254 tgacataatcacgtgtgcgattgtttgagatagcttatgaaaatagcttat 11448204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 33723335 - 33723389
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgt 75  Q
    |||||||||||||||||||| ||| || | |||||| |||||||| |||||||||    
T  33723335 cataaacacttgtgagactgcttgggaaaacttatggaaacagctcatgacatgt 33723389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 37811960 - 37811910
Alignment:
Q  30 ttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||| |||| |||||| | ||||||||||||||||||||||||| ||||    
T  37811960 ttgtgatactggttgagagaacttatgaaaacagcttatgacatgttcata 37811910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 38001704 - 38001654
Alignment:
Q  30 ttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||||||| || | ||||||||||||||||||||| ||| ||||    
T  38001704 ttgtgagactgtttgggagaacttatgaaaacagcttatgacctgttcata 38001654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 5157209 - 5157140
Alignment:
Q  1 tattggaacgtatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatga 70  Q
    |||| |||| ||||||  ||||||||||||||||| |||||||| || |||||||  ||||| |||||||    
T  5157209 tatttgaacttatctacggacataaacacttgtgaaactgtttgggagagcttatagaaacaacttatga 5157140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 15581381 - 15581316
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtc 76  Q
    |||||| |||||||| ||||||||||| ||||||  | |||| ||| ||||| |||||||||||||    
T  15581381 tatctactgacataagcacttgtgagattgtttggaagagctaatggaaacaacttatgacatgtc 15581316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 23373258 - 23373323
Alignment:
Q  13 tctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtcca 78  Q
    |||| ||| |||| ||||||||||| |||||| || |||||||  ||||| |||||||||||||||    
T  23373258 tctactgatataagcacttgtgagattgtttgggagagcttatagaaacaacttatgacatgtcca 23373323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 49282665 - 49282713
Alignment:
Q  20 acataaacacttgtgagactgtttgagatagcttatgaaaacagcttatg 69  Q
    |||||||||||||||||||| | ||| | |||||||||||||||||||||    
T  49282665 acataaacacttgtgagactatctga-agagcttatgaaaacagcttatg 49282713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 6262134 - 6262078
Alignment:
Q  24 aaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||||||||||||   | ||||||||| |||| |||||||||||| ||||    
T  6262134 aaacacttgtgagactgtttacaagagcttatgagaacaacttatgacatgttcata 6262078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 23407537 - 23407489
Alignment:
Q  32 gtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||| ||||| |||||||  ||| |||||||||||||||||||    
T  23407537 gtgagactgtctgagagagcttattgaaatagcttatgacatgtccata 23407489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 6e-21; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 2996710 - 2996631
Alignment:
Q  1 tattggaacgtatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||| |||| ||| ||||||||||| ||||| ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  2996710 tatttgaacttatttattgacataagcacttttgagactgtttgagagagcttatgaaaacaacttatgacatgtccata 2996631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 55870285 - 55870354
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||| ||||||||||| |||||||||| |||||||||||||||||||| || ||||||| ||||||||    
T  55870285 tatctaatgacataaacatttgtgagactctttgagatagcttatgaaaaaagtttatgacctgtccata 55870354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 18628496 - 18628555
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatga 70  Q
    |||||| ||||||||||||||||||||||||||| || |||||||||||||| |||||||    
T  18628496 tatctactgacataaacacttgtgagactgtttgggagagcttatgaaaacaacttatga 18628555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 46090764 - 46090821
Alignment:
Q  18 tgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgt 75  Q
    |||||| |||| |||||||||||| ||||||||||||||||||||||||| |||||||    
T  46090764 tgacattaacatttgtgagactgtatgagatagcttatgaaaacagcttaagacatgt 46090821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 4071994 - 4071946
Alignment:
Q  22 ataaacacttgtgagactgtttgagatagcttatgaaaacagcttatga 70  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  4071994 ataagcacttgtgagactgtttgagagagcttatgaaaacagcttatga 4071946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 8328062 - 8328130
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccat 79  Q
    ||||||||| ||||| ||||| ||||||||||||  ||||||||||||||||  |||||||||||||||    
T  8328062 tatctattggcataagcacttatgagactgtttggaatagcttatgaaaacaatttatgacatgtccat 8328130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 29376040 - 29375960
Alignment:
Q  1 tattggaacgtatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccatat 81  Q
    |||| |||| ||||||||||||||| |||||||||  || ||| ||| |||||||| ||||||||||||||| ||||||||    
T  29376040 tatttgaacttatctattgacataagcacttgtgacgctatttcagagagcttatggaaacagcttatgacaggtccatat 29375960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 6428134 - 6428076
Alignment:
Q  22 ataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||| |||||||||||| |||||||| || ||||||||||| |||||||||||||||||    
T  6428134 ataagcacttgtgagacagtttgagagagattatgaaaacaacttatgacatgtccata 6428076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 7368007 - 7368061
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgt 75  Q
    ||||||| |||||||||||||||| || |||| ||||||||||||||||||||||    
T  7368007 cataaacgcttgtgagactgtttgggagagctcatgaaaacagcttatgacatgt 7368061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 27123312 - 27123360
Alignment:
Q  28 acttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtc 76  Q
    |||||||||||||||||||| |||||||| ||||| |||||||||||||    
T  27123312 acttgtgagactgtttgagagagcttatggaaacaacttatgacatgtc 27123360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 3549498 - 3549565
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtcca 78  Q
    ||||||||| ||||| ||||| ||||||||||||||| | |||||||||| ||  |||||||||||||    
T  3549498 tatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtcca 3549565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 52172833 - 52172760
Alignment:
Q  30 ttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccatatgagcaaatgaaaacaactgataa 104  Q
    ||||||||||||| | || | ||||||||||||||||||||||||| ||||| |||  |||||||||||| ||||    
T  52172833 ttgtgagactgttggggaaaacttatgaaaacagcttatgacatgttcatat-agcttatgaaaacaacttataa 52172760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 1408279 - 1408332
Alignment:
Q  27 cacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||| ||||||||||||||| |  ||||||||||||||||| |||||||||||    
T  1408279 cacttatgagactgtttgagagaatttatgaaaacagcttattacatgtccata 1408332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 39178209 - 39178270
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgaca 72  Q
    |||||| |||||||||||||| ||| |||||||| || | ||||||||||| ||||||||||    
T  39178209 tatctactgacataaacacttttgacactgtttgggagaacttatgaaaaccgcttatgaca 39178270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 22471401 - 22471349
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacag 63  Q
    |||||| |||||||| |||||||||||||||||| || | |||||||||||||    
T  22471401 tatctactgacataagcacttgtgagactgtttgggagaacttatgaaaacag 22471349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 25583712 - 25583652
Alignment:
Q  18 tgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtcca 78  Q
    |||||||||||  |||||||||||||| ||  ||||||| ||||| |||||||||||||||    
T  25583712 tgacataaacatgtgtgagactgtttgggagcgcttatgcaaacaacttatgacatgtcca 25583652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 44320073 - 44320025
Alignment:
Q  14 ctattgacataaacacttgtgagactgtttgagatagcttatgaaaaca 62  Q
    |||||| |||||||| ||||||||||||||| || ||||||||||||||    
T  44320073 ctattggcataaacaattgtgagactgtttgggagagcttatgaaaaca 44320025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 46860055 - 46859999
Alignment:
Q  1 tattggaacgtatctattgacataaacacttgtgagactgtttgagatagcttatga 57  Q
    |||| |||| |||||||| |||||| ||||||||| ||||||||||| |||||||||    
T  46860055 tatttgaacttatctattcacataagcacttgtgaaactgtttgagagagcttatga 46859999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 4691959 - 4691904
Alignment:
Q  27 cacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccatatg 82  Q
    ||||||||||||| ||||||| | |||||| ||||| ||||||||||| |||||||    
T  4691959 cacttgtgagactatttgagaaaacttatggaaacaacttatgacatgcccatatg 4691904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 22523807 - 22523748
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatga 70  Q
    |||||| ||||||||  |||||||||||||||||||  | |||||||||| |||||||||    
T  22523807 tatctactgacataagtacttgtgagactgtttgagtcaacttatgaaaatagcttatga 22523748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 69
Target Start/End: Original strand, 25904184 - 25904223
Alignment:
Q  30 ttgtgagactgtttgagatagcttatgaaaacagcttatg 69  Q
    ||||||||||||||| || |||||||||||||||||||||    
T  25904184 ttgtgagactgtttgggagagcttatgaaaacagcttatg 25904223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 54277256 - 54277335
Alignment:
Q  1 tattggaacgtatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||| |||| |||||| |||||||||||||| |||||||||| | || ||||||   ||||||||||| |||||| ||||    
T  54277256 tatttgaacttatctagtgacataaacacttatgagactgttagcgagagcttacagaaacagcttatcacatgttcata 54277335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 6987703 - 6987753
Alignment:
Q  30 ttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||||||| || |||||||| | ||| |||||||||||||||||    
T  6987703 ttgtgagactgtttgggagagcttatggatacaacttatgacatgtccata 6987753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 19429466 - 19429524
Alignment:
Q  22 ataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||| ||||||||||||| || |||||||| | | | |||||||||||||||||    
T  19429466 ataaacactcgtgagactgtttgggagagcttatggagaaaacttatgacatgtccata 19429524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 23819197 - 23819147
Alignment:
Q  30 ttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||||||||  | || ||| |||||||||||||||||||||||||    
T  23819197 ttgtgagactgtttggaagagtttaagaaaacagcttatgacatgtccata 23819147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 46247322 - 46247268
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgt 75  Q
    ||||||||||||||||| ||| ||||| | |||||||||| | ||||||||||||    
T  46247322 cataaacacttgtgagattgtctgagagatcttatgaaaagaacttatgacatgt 46247268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 50742790 - 50742848
Alignment:
Q  22 ataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||| ||||||| ||||||||||||| | ||||||||||||| | ||||||||| ||||    
T  50742790 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcata 50742848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 1137827 - 1137770
Alignment:
Q  23 taaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||||| |||||||  || | |||||||||||| |||||||||||| ||||    
T  1137827 taaacacttgtgacactgtttaggagaacttatgaaaacatcttatgacatgttcata 1137770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 2841753 - 2841688
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtc 76  Q
    |||| ||||||||||| ||| |||||| |||||| || || |||||||| || |||||||||||||    
T  2841753 tatccattgacataaaaactcgtgagattgtttgcgagagtttatgaaagcaacttatgacatgtc 2841688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 7730727 - 7730658
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||| ||||||||||||  |||||||| |||  || |||||| | ||||| |||||||||||||||||    
T  7730727 tatctaatgacataaacacgcgtgagactattttggagagcttaaggaaacaacttatgacatgtccata 7730658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 10365902 - 10365833
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||| ||||||||||||| | |||||| ||||||| |||||||  |||||  |||| |||||||||||    
T  10365902 tatctactgacataaacactggagagactatttgagacagcttatcgaaacaaattataacatgtccata 10365833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 19305053 - 19304984
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||||||| || |||||||| ||| || || |  || || |||||||||||||||||||||||    
T  19305053 tatctattgacataagcatttgtgagattgtgtgggagaatttgtggaaacagcttatgacatgtccata 19304984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 25896895 - 25896842
Alignment:
Q  27 cacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||||||||||  || |||||||  ||| |||||||||||||||||||    
T  25896895 cacttgtgagactgtttaggagagcttatagaaatagcttatgacatgtccata 25896842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 32071990 - 32071926
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||||||| |||||||||||| |||||||     ||||| ||||| ||||||||| |||||||    
T  32071990 tatctattgacataagcacttgtgagacagtttgag-----ttatggaaacaacttatgacacgtccata 32071926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 33534112 - 33534181
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||| ||||||||  |||||||||| | ||||||| ||||||||||||||  || |||||| ||||||    
T  33534112 tatctagtgacataagtacttgtgagagtatttgagagagcttatgaaaacaaattgtgacatatccata 33534181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 49893434 - 49893381
Alignment:
Q  20 acataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacat 73  Q
    |||||||||||| | | ||||||||||  |||||||| ||||||||||||||||    
T  49893434 acataaacacttctaaaactgtttgagggagcttatggaaacagcttatgacat 49893381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 49940128 - 49940165
Alignment:
Q  30 ttgtgagactgtttgagatagcttatgaaaacagctta 67  Q
    |||||||||||||||||| | |||||||||||||||||    
T  49940128 ttgtgagactgtttgagagaacttatgaaaacagctta 49940165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 50298642 - 50298574
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||| |||||||| ||||||||||||||||||  | | ||||| |||| |||||||||||||| ||||    
T  50298642 tatctactgacataagcacttgtgagactgtttggaaaaacttat-aaaatagcttatgacatgttcata 50298574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 1017154 - 1017122
Alignment:
Q  12 atctattgacataaacacttgtgagactgtttg 44  Q
    ||||| |||||||||||||||||||||||||||    
T  1017154 atctactgacataaacacttgtgagactgtttg 1017122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 2236945 - 2236985
Alignment:
Q  33 tgagactgtttgagatagcttatgaaaacagcttatgacat 73  Q
    ||||||||||||||||| |||||||||||| ||||| ||||    
T  2236945 tgagactgtttgagataacttatgaaaacaacttatcacat 2236985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 3176060 - 3176112
Alignment:
Q  24 aaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtc 76  Q
    |||||||||||| |||||||  || |||||||||||||| |||||| ||||||    
T  3176060 aaacacttgtgaaactgtttaggagagcttatgaaaacatcttatgtcatgtc 3176112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 4449061 - 4449113
Alignment:
Q  26 acacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtcca 78  Q
    ||||| || ||||||||| ||| || ||||||||||| |||||||||||||||    
T  4449061 acactagttagactgtttcagaaagtttatgaaaacatcttatgacatgtcca 4449113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 21043195 - 21043239
Alignment:
Q  28 acttgtgagactgtttgagatagcttatgaaaacagcttatgaca 72  Q
    ||||||||||||||||| || || ||||| |||||||||||||||    
T  21043195 acttgtgagactgtttgggagaggttatggaaacagcttatgaca 21043239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 27725316 - 27725272
Alignment:
Q  36 gactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||||| |||||||| ||| | |||||||||||||||||    
T  27725316 gactgtttgagagagcttatggaaataacttatgacatgtccata 27725272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 28615451 - 28615400
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacat 73  Q
    ||||||||||||||||| |||||| || | ||||||||||||||| |||||||    
T  28615451 cataaacacttgtgagattgtttg-gagaacttatgaaaacagctaatgacat 28615400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 29373866 - 29373918
Alignment:
Q  25 aacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtcc 77  Q
    ||||||||| |||| |||||||| |||||||  |||||||||||||| |||||    
T  29373866 aacacttgtcagacggtttgagagagcttatagaaacagcttatgacgtgtcc 29373918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 32171330 - 32171393
Alignment:
Q  15 tattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtcca 78  Q
    ||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||| |||||    
T  32171330 tattgacataagcacttgcgagactgtttgagagagcttatgaaaacagcttatgacaagtcca 32171393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 8420140 - 8420207
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtcca 78  Q
    |||||||||||||||||||||||||||||||| | || |||||||  ||| |||||||||||||||||    
T  8420140 tatctattgacataaacacttgtgagactgttagtgagagcttatagaaatagcttatgacatgtcca 8420207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 32917313 - 32917255
Alignment:
Q  22 ataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||||||||||||||| || |||||||| ||||| |||||||||||||||||    
T  32917313 ataaacacttgtgagactgtttgggagagcttatggaaacaacttatgacatgtccata 32917255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 27857485 - 27857416
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||| ||||||| |||||||||| |||||||| || |||||||||||||| |||||||||| ||||||    
T  27857485 tatctactgacatagacacttgtgaaactgtttgggagagcttatgaaaacaacttatgacatctccata 27857416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 33737697 - 33737628
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||||||||||||||||  ||||||||||| | |||||||| ||| |||||| ||||| ||||    
T  33737697 tatctattgacataaacacttgtgcaactgtttgagagaacttatgaacacaacttatggcatgttcata 33737628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 34939871 - 34939802
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||| ||||||||||| |||||| |||||||  || |||||| | |||||||||||||||||||||||    
T  34939871 tatctagtgacataaacatttgtgaaactgttttggagagcttacggaaacagcttatgacatgtccata 34939802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 2460111 - 2460159
Alignment:
Q  28 acttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtc 76  Q
    |||||||||||||||||||| |||||||| ||||| |||||||||||||    
T  2460111 acttgtgagactgtttgagagagcttatggaaacaacttatgacatgtc 2460159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 2735187 - 2735135
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacat 73  Q
    ||||||||  ||||||||||||||||||| ||||||||||| |||||||||||    
T  2735187 cataaacatctgtgagactgtttgagataacttatgaaaacggcttatgacat 2735135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 769265 - 769196
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagat-agcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||  ||||||||||||||||||||||| ||| | |||||||||||| |||||||||||| ||||    
T  769265 tatctattggtataaacacttgtgagactgtttg-gatgaacttatgaaaacatcttatgacatgttcata 769196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 34538172 - 34538230
Alignment:
Q  22 ataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||| ||||||||||||| ||||||| | ||||| ||||||||||| ||||||||||||    
T  34538172 ataagcacttgtgagactatttgagagatcttataaaaacagcttacgacatgtccata 34538230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 7490415 - 7490464
Alignment:
Q  33 tgagactgtttgagatagcttatgaaaacagcttatgacatgtccatatg 82  Q
    |||||||| ||||||||||||||  ||||||||||||| |||||||||||    
T  7490415 tgagactgcttgagatagcttatataaacagcttatgatatgtccatatg 7490464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 10031859 - 10031790
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||| |||||||| ||||||||||||||||||| | ||| ||||||| || |||| ||||| ||||||    
T  10031859 tatctactgacataagcacttgtgagactgtttgaaagagcctatgaaaccaacttacgacatatccata 10031790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 11600819 - 11600884
Alignment:
Q  13 tctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtcca 78  Q
    |||| ||||||||||||||||||| ||||||   | || || ||||||||||||||||||||||||    
T  11600819 tctactgacataaacacttgtgaggctgttttgtagagtttttgaaaacagcttatgacatgtcca 11600884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 30863369 - 30863304
Alignment:
Q  15 tattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||| ||||||||||||| ||||| ||||  | |||||||||||||| |||||||||||| ||||    
T  30863369 tattggcataaacacttgttagactctttggtagagcttatgaaaacaacttatgacatgtacata 30863304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 32577939 - 32577995
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtcc 77  Q
    |||||| ||||| || | ||||||||| |||||||||||||| ||||||||||||||    
T  32577939 cataaatacttgggacattgtttgagagagcttatgaaaacaacttatgacatgtcc 32577995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 2263317 - 2263250
Alignment:
Q  13 tctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||| |||||||||||  || ||||||||||| | |||||||||||| | |||||||||| ||||    
T  2263317 tctattgtcataaacacttaagaaactgtttgagagaacttatgaaaacaacatatgacatgttcata 2263250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 2732192 - 2732259
Alignment:
Q  13 tctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||| |||||||| ||||||||||||||||||  | |||||||| |||||||| ||||  ||||||||    
T  2732192 tctactgacataagcacttgtgagactgtttggaaaagcttatggaaacagctaatgatctgtccata 2732259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 3738178 - 3738127
Alignment:
Q  29 cttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||||||||| | | ||| || |||||||||||||||||||||||    
T  3738178 cttgtgagactgtttgaaagatcttgtggaaacagcttatgacatgtccata 3738127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 8147012 - 8147071
Alignment:
Q  14 ctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacat 73  Q
    |||||||||||| ||||||| ||||||||| | | |||||||||||||| ||||| ||||    
T  8147012 ctattgacataaccacttgttagactgtttcaaagagcttatgaaaacaacttataacat 8147071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 10353713 - 10353764
Alignment:
Q  20 acataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgac 71  Q
    |||||| |||||||||||||||||| || ||||| ||||||||| |||||||    
T  10353713 acataagcacttgtgagactgtttgggagagcttgtgaaaacagtttatgac 10353764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 33500433 - 33500492
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||| ||||| |||||||||||||||  ||||||||||||||  ||||||||||| ||||    
T  33500433 catacacactcgtgagactgtttgagggagcttatgaaaacaatttatgacatgtgcata 33500492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 738484 - 738542
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatg 69  Q
    |||||||||| ||||||| |||||||| ||| ||| | || ||||||||||||||||||    
T  738484 tatctattgagataaacatttgtgagattgtctgataaagtttatgaaaacagcttatg 738542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 33385661 - 33385587
Alignment:
Q  6 gaacgtatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||| |||||| ||| |||| ||||||||| ||||||||  | || ||||| |||||||| ||||||||||||||    
T  33385661 gaacttatctactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccata 33385587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 725607 - 725664
Alignment:
Q  20 acataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtcc 77  Q
    ||||||||||| ||||||   || |||| |||||||||||||| ||||||||||||||    
T  725607 acataaacactcgtgagaacattcgagagagcttatgaaaacaacttatgacatgtcc 725664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 4325248 - 4325317
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||| | |||||||||||||||||||| |||| || |||||| | ||| || |||| |||||||||||    
T  4325248 tatctactaacataaacacttgtgagactatttgtgacagcttagggaaatagtttatcacatgtccata 4325317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 31668474 - 31668433
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaaca 62  Q
    ||||||||||||||||||| || |||| ||||||||||||||    
T  31668474 cataaacacttgtgagactattagagagagcttatgaaaaca 31668433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 33116695 - 33116642
Alignment:
Q  27 cacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||||||||||||  |  ||||||||||| |||||||||||| ||||    
T  33116695 cacttgtgagactgtttgagggaatttatgaaaacaacttatgacatgtgcata 33116642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 34544103 - 34544156
Alignment:
Q  27 cacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||| ||| ||||| | | ||||||||||||| ||||||||||||||||    
T  34544103 cacttgtgaaactatttgaaagatcttatgaaaacagtttatgacatgtccata 34544156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 3775080 - 3775140
Alignment:
Q  20 acataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||||||||||||| || |  | |||||||  |||||||||||||||||| ||||    
T  3775080 acataaacacttgtgagactattcggaagagcttatagaaacagcttatgacatgtgcata 3775140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 29040114 - 29040174
Alignment:
Q  20 acataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||| |||||||||||||||||| ||||| |  |  || ||||||||||||||||||||    
T  29040114 acataagcacttgtgagactgtttgggatagttatttgaatcagcttatgacatgtccata 29040174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 32976088 - 32976036
Alignment:
Q  28 acttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||||||||||  | |||||||  |||||||||||||||| ||||||    
T  32976088 acttgtgagactgtttggaagagcttatagaaacagcttatgacatttccata 32976036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 33498733 - 33498681
Alignment:
Q  24 aaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtc 76  Q
    |||||||| ||||||| ||||  | |||||||||||||| |||||||||||||    
T  33498733 aaacacttctgagactttttggtagagcttatgaaaacaacttatgacatgtc 33498681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 6e-18; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 33894747 - 33894685
Alignment:
Q  18 tgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||| |||||||||||||||||| || |||||||||||||||| |||||||||||||||    
T  33894747 tgacataagcacttgtgagactgtttgtgagagcttatgaaaacagcatatgacatgtccata 33894685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 25670529 - 25670593
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgt 75  Q
    ||||||||||||||| | ||||||||||||||||||| | |||||||||||| ||||||||||||    
T  25670529 tatctattgacataagctcttgtgagactgtttgagaaaacttatgaaaacaacttatgacatgt 25670593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 20547333 - 20547398
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtc 76  Q
    |||||| |||||||||||||||||| ||||||||||| |||||||| | ||||| |||||||||||    
T  20547333 tatctaatgacataaacacttgtgatactgtttgagagagcttatggagacagcctatgacatgtc 20547398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 34754753 - 34754814
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgaca 72  Q
    |||||||||||| |||||||| ||||||||||||||| |||||| ||||||| |||||||||    
T  34754753 tatctattgacacaaacacttatgagactgtttgagagagcttaagaaaacatcttatgaca 34754814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 27626084 - 27626135
Alignment:
Q  29 cttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||| ||||||||| |||||||| |||||||||||||||||||||||    
T  27626084 cttgtgagattgtttgagaaagcttatggaaacagcttatgacatgtccata 27626135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 22387846 - 22387903
Alignment:
Q  18 tgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgt 75  Q
    |||||||||||| |||||||||||||| || |||||||||||||| |||||| |||||    
T  22387846 tgacataaacacgtgtgagactgtttgggagagcttatgaaaacaacttatggcatgt 22387903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 13960676 - 13960735
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||| |||||| |||||| ||||||| |||||||||||||||||||| ||| |||||||    
T  13960676 cataagcacttgcgagactatttgagagagcttatgaaaacagcttataacaagtccata 13960735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 23214972 - 23214913
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||| ||||||||||||||| |  ||||||||||| |||||||||| ||||||    
T  23214972 cataaacacttatgagactgtttgagagaatttatgaaaacaacttatgacatttccata 23214913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 29574582 - 29574637
Alignment:
Q  25 aacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||||||||||||  || | |||||| |||||||||||||||||||||||    
T  29574582 aacacttgtgagactgtttcggagaacttatggaaacagcttatgacatgtccata 29574637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 36538025 - 36537966
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||||||||| ||||||||| | |||||| ||||| |||||||||||| ||||    
T  36538025 cataaacacttgtgagattgtttgagagaacttatggaaacaacttatgacatgttcata 36537966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 36598289 - 36598368
Alignment:
Q  1 tattggaacgtatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||| |||| || ||| |||||||| || |||||||| ||||||||| |||||||| ||||| |||||||||||| ||||    
T  36598289 tatttgaacttaactactgacataagcaattgtgagattgtttgagagagcttatggaaacatcttatgacatgttcata 36598368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 8094423 - 8094369
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgt 75  Q
    ||||| ||||||||||||| ||||||| |  ||||||||||||||||||||||||    
T  8094423 cataagcacttgtgagactatttgagagattttatgaaaacagcttatgacatgt 8094369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 12242370 - 12242312
Alignment:
Q  12 atctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatga 70  Q
    ||||| |||||||| | ||||||||||||||||||| |||||||| |||| ||||||||    
T  12242370 atctactgacataacctcttgtgagactgtttgagagagcttatgcaaacggcttatga 12242312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 33645903 - 33645969
Alignment:
Q  11 tatctattgacataaacacttgtgagact-gtttgagatagcttatgaaaacagcttatgacatgtc 76  Q
    ||||||||||| |||| |||||||||||| ||| |||| |||||||| ||||| |||||||||||||    
T  33645903 tatctattgacgtaaaaacttgtgagactggttggagagagcttatggaaacaacttatgacatgtc 33645969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 2222049 - 2221995
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagctta 67  Q
    ||||||||||||  |||| ||||||||||||||||||||||||||| ||||| ||||    
T  2222049 tatctattgaca--aacatttgtgagactgtttgagatagcttatggaaacaactta 2221995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 28727706 - 28727770
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgt 75  Q
    ||||| ||||| |||  ||||| |||||||||||||| |||||||| |||| |||||||||||||    
T  28727706 tatcttttgacctaagaacttgcgagactgtttgagagagcttatggaaacggcttatgacatgt 28727770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 43250647 - 43250706
Alignment:
Q  15 tattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgt 75  Q
    ||||| ||||||||||||||| | |||||| |||  |||||||||||||||||||||||||    
T  43250647 tattggcataaacacttgtga-attgtttgggattacttatgaaaacagcttatgacatgt 43250706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 7453350 - 7453409
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||| ||||||||| ||||||||||| ||| |||| ||||| ||||| |||||||||||    
T  7453350 cataagcacttgtgaaactgtttgagagagcatatggaaacatcttattacatgtccata 7453409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 28340382 - 28340432
Alignment:
Q  29 cttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||||||| | || |||||||||||||| |||||||||||||||||    
T  28340382 cttgtgagactgttgg-gagagcttatgaaaacaacttatgacatgtccata 28340432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 31003045 - 31002998
Alignment:
Q  33 tgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||||||| || |||| |||||| |||||||||||||||||    
T  31003045 tgagactgtttgagaaagtttataaaaacaacttatgacatgtccata 31002998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 46223026 - 46223085
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||||||||||||||||||  |  ||||| |||||||||  ||||||||||||    
T  46223026 cataaacacttgtgagactgtttgaggcattttatggaaacagcttgcgacatgtccata 46223085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 29287342 - 29287285
Alignment:
Q  22 ataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||| |||||||| ||||  | |||||||||||| |||||||||||||||||||    
T  29287342 ataaacactcgtgagactatttgt-agagcttatgaaaatagcttatgacatgtccata 29287285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 17759642 - 17759585
Alignment:
Q  22 ataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccat 79  Q
    ||||||||||| |||| || ||| || ||||||| ||||||||||||| |||||||||    
T  17759642 ataaacacttgggagagtggttgggaaagcttatcaaaacagcttatgccatgtccat 17759585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 76
Target Start/End: Complemental strand, 30134148 - 30134111
Alignment:
Q  39 tgtttgagatagcttatgaaaacagcttatgacatgtc 76  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  30134148 tgtttgagaaagcttatggaaacagcttatgacatgtc 30134111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 30535683 - 30535626
Alignment:
Q  18 tgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgt 75  Q
    ||||||||||||||| ||||||||||  || | |||||||||||| ||||||| ||||    
T  30535683 tgacataaacacttgagagactgttttggagaacttatgaaaacaacttatgatatgt 30535626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 44687062 - 44686989
Alignment:
Q  6 gaacgtatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccat 79  Q
    |||| |||||| | ||||||||| ||||||||||  || | | |||||||| ||||| ||||||||||||||||    
T  44687062 gaacttatctactaacataaacatttgtgagacttcttaaaagagcttatggaaacaacttatgacatgtccat 44686989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 47041982 - 47042027
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatg 56  Q
    ||||||||||||| ||||||||||||||| |||| || ||||||||    
T  47041982 tatctattgacattaacacttgtgagactttttgtgagagcttatg 47042027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 70
Target Start/End: Original strand, 20526890 - 20526930
Alignment:
Q  30 ttgtgagactgtttgagatagcttatgaaaacagcttatga 70  Q
    |||||||||||||||||| | || |||||||||||||||||    
T  20526890 ttgtgagactgtttgagagaactgatgaaaacagcttatga 20526930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 28165208 - 28165164
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagct 65  Q
    ||||| ||||| ||||||| |||||||||||||||| ||||||||    
T  28165208 cataagcacttatgagactctttgagatagcttatggaaacagct 28165164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 28691788 - 28691847
Alignment:
Q  20 acataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||| || ||||||||||||| | || | ||||||||||||||||||||| ||||||||    
T  28691788 acataagcatttgtgagactgttcg-gagatcttatgaaaacagcttatgacttgtccata 28691847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 28844613 - 28844549
Alignment:
Q  15 tattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccat 79  Q
    ||||| ||||| ||| ||||| |||||||  || ||||| |||||||| ||||||||||||||||    
T  28844613 tattgtcataagcacatgtgatactgtttaggagagcttctgaaaacaacttatgacatgtccat 28844549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 36203197 - 36203149
Alignment:
Q  20 acataaacacttgtgagactgtttgagatagcttatgaaaacagcttat 68  Q
    |||||| ||||||||||| |||||| |||| ||||| ||||||||||||    
T  36203197 acataagcacttgtgagaatgtttgggataacttatcaaaacagcttat 36203149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 16162877 - 16162818
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||| ||| ||||    
T  16162877 cataaacacttgtgagactgtttgagaaaacttatgaaaacagcttatgacctgttcata 16162818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 21130732 - 21130671
Alignment:
Q  18 tgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccat 79  Q
    ||||||||| |||||||||||||||||||| |||||||| ||| ||||| ||||||||||||    
T  21130732 tgacataaatacttgtgagactgtttgagagagcttatggaaatagcttttgacatgtccat 21130671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 31915236 - 31915305
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||| ||||||| |||||||||||||||||||| |||||||  ||||| ||||||||| |||||||    
T  31915236 tatctattcacataaatacttgtgagactgtttgagaaagcttatacaaacaacttatgacaagtccata 31915305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 11569410 - 11569469
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||| ||||||||||||||||| ||| |||||||| |||||||||||||||||| ||||    
T  11569410 cataaccacttgtgagactgtttaagagagcttatggaaacagcttatgacatgtacata 11569469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 31875548 - 31875607
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||| |||| ||||||||||| |||||||| ||||| |||||||||||||||||    
T  31875548 cataaacactagtgacactgtttgagaaagcttatggaaacaacttatgacatgtccata 31875607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 39881654 - 39881733
Alignment:
Q  1 tattggaacgtatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||| |||| ||||||||| ||||||||||||||||| ||||||  | ||||| |||||| |||||||||||||| ||||    
T  39881654 tatttgaacttatctattggcataaacacttgtgagattgtttggaagagcttgtgaaaatagcttatgacatgttcata 39881733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 34770985 - 34770927
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccat 79  Q
    ||||| ||||||||| ||||||||||| | | |||||||||||||||||||||||||||    
T  34770985 cataagcacttgtgaaactgtttgagagatcctatgaaaacagcttatgacatgtccat 34770927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 30191084 - 30191148
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgt 75  Q
    ||||||||| ||||| ||||||| |||||||||| || |||||||| ||||| ||||||||||||    
T  30191084 tatctattggcataagcacttgttagactgtttgggagagcttatggaaacaacttatgacatgt 30191148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 2487952 - 2488015
Alignment:
Q  12 atctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgt 75  Q
    ||||| |||||||| |||||||||||||||||| || | |||||||||||| ||||| ||||||    
T  2487952 atctactgacataagcacttgtgagactgtttgggagaacttatgaaaacaacttataacatgt 2488015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 7918734 - 7918781
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttat 68  Q
    |||||||||||||||||||||||| || |||||||||||||| |||||    
T  7918734 cataaacacttgtgagactgtttgggagagcttatgaaaacaacttat 7918781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 9700118 - 9700059
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||||||||||| ||||||| ||||| ||||| ||  ||||||||||||||||    
T  9700118 cataaacacttgtgagactatttgagagagcttgtgaaatcaatttatgacatgtccata 9700059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 14949983 - 14949924
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||| ||||||||||||||  || |||||||||||| | |||||||||||||||||    
T  14949983 cataaacatttgtgagactgtttaggagagcttatgaaaataacttatgacatgtccata 14949924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 30987953 - 30988003
Alignment:
Q  30 ttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||| |||||||||| |||||||| ||||| |||||||||||||||||    
T  30987953 ttgtgagtctgtttgagagagcttatggaaacaacttatgacatgtccata 30988003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 12851302 - 12851234
Alignment:
Q  14 ctattgacataaacacttgtga--gactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||| |||||||||||||||  ||||||||| || | |||||||||||||||||| |||||| ||||    
T  12851302 ctattggcataaacacttgtgatagactgtttgggaaaacttatgaaaacagcttataacatgttcata 12851234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 4251063 - 4251019
Alignment:
Q  31 tgtgagactgtttgagatagcttatgaaaacagcttatgacatgt 75  Q
    ||||||||||||||||| || |||||||||| |||||||||||||    
T  4251063 tgtgagactgtttgagagagtttatgaaaactgcttatgacatgt 4251019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 26410400 - 26410340
Alignment:
Q  18 tgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtcca 78  Q
    |||||||| ||||| |||||||| ||| || |||||||| |||||||| ||||||||||||    
T  26410400 tgacataagcacttctgagactgcttgggagagcttatggaaacagctcatgacatgtcca 26410340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 8060795 - 8060745
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaaca 62  Q
    |||||||||||||||||||||  || ||||||||||| ||||||||||||||    
T  8060795 tatctattgacataaacacttc-gaaactgtttgagagagcttatgaaaaca 8060745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 24326158 - 24326099
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatga 70  Q
    |||||| || ||||| |||||||||||||||||| || |||||||| |||||| ||||||    
T  24326158 tatctactggcataagcacttgtgagactgtttgggagagcttatggaaacagtttatga 24326099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 80
Target Start/End: Original strand, 29168646 - 29168677
Alignment:
Q  49 agcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||||||||||||||||||||||||    
T  29168646 agcttatgaaaacagcttatgacatgtccata 29168677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 29169889 - 29169948
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||| ||||||||| | |||||| || |||||||||||||||| |||||||| ||||||    
T  29169889 cataagcacttgtgaaattgtttgggagagcttatgaaaacagcatatgacatatccata 29169948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 73
Target Start/End: Complemental strand, 30918220 - 30918177
Alignment:
Q  30 ttgtgagactgtttgagatagcttatgaaaacagcttatgacat 73  Q
    |||||||||||||||||| |||||||||||||| ||| ||||||    
T  30918220 ttgtgagactgtttgagagagcttatgaaaacaacttgtgacat 30918177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 39049389 - 39049334
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtc 76  Q
    |||||||| |||||||| |||||| || |||||||||||||| ||||| |||||||    
T  39049389 cataaacatttgtgagattgtttgtgaaagcttatgaaaacaacttataacatgtc 39049334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 43208089 - 43208160
Alignment:
Q  1 tattggaacgtatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgaca 72  Q
    |||| |||| |||||| ||||||| |||||  ||||||||||||| | ||||||| ||||||||||| ||||    
T  43208089 tatttgaacttatctactgacatacacactactgagactgtttgaaagagcttataaaaacagcttacgaca 43208160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 43908650 - 43908701
Alignment:
Q  18 tgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatg 69  Q
    |||||||| ||||||||| ||||||||||| || ||| ||||||||||||||    
T  43908650 tgacataagcacttgtgaaactgtttgagagagtttaagaaaacagcttatg 43908701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 72
Target Start/End: Complemental strand, 26771374 - 26771332
Alignment:
Q  30 ttgtgagactgtttgagatagcttatgaaaacagcttatgaca 72  Q
    ||||||||||||||| || | ||||||||||||||||||||||    
T  26771374 ttgtgagactgtttgggagaacttatgaaaacagcttatgaca 26771332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 33940134 - 33940088
Alignment:
Q  22 ataaacacttgtgagactgtttgagatagcttatgaaaacagcttat 68  Q
    |||| ||||||||||||  ||||||| ||||||||||||||||||||    
T  33940134 ataagcacttgtgagacaatttgagagagcttatgaaaacagcttat 33940088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 72
Target Start/End: Original strand, 35534574 - 35534616
Alignment:
Q  30 ttgtgagactgtttgagatagcttatgaaaacagcttatgaca 72  Q
    |||||||||||||||||| | ||| ||||||||||||||||||    
T  35534574 ttgtgagactgtttgagagaacttgtgaaaacagcttatgaca 35534616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 45071506 - 45071436
Alignment:
Q  6 gaacgtatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtc 76  Q
    |||| |||||| ||||||||| | ||| ||| ||||||  || |||||||||||||| |||||||||||||    
T  45071506 gaacttatctaatgacataaaaaattgggaggctgtttcggagagcttatgaaaacaacttatgacatgtc 45071436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 1561404 - 1561335
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||| || ||||||||||||||||| ||||||||| |||| |  |||||| ||||||| || ||||||    
T  1561404 tatctaatggcataaacacttgtgagattgtttgagagagctcacaaaaacaacttatgatatatccata 1561335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 6950449 - 6950384
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtc 76  Q
    |||||| || |||||||| |||||||| |||||| || |||||||| ||||| | |||||||||||    
T  6950449 tatctactggcataaacatttgtgagattgtttgggagagcttatgtaaacaacctatgacatgtc 6950384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 8558776 - 8558719
Alignment:
Q  22 ataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccat 79  Q
    ||||| ||||||||| ||||||| || |||||||| ||||| ||| ||||||||||||    
T  8558776 ataaatacttgtgaggctgtttgggagagcttatggaaacaacttgtgacatgtccat 8558719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 10120859 - 10120822
Alignment:
Q  36 gactgtttgagatagcttatgaaaacagcttatgacat 73  Q
    |||||||||||| | |||||||||||||||||||||||    
T  10120859 gactgtttgagagaacttatgaaaacagcttatgacat 10120822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 1664486 - 1664450
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatga 57  Q
    |||||||||||||||||||||||| || |||||||||    
T  1664486 cataaacacttgtgagactgtttgggagagcttatga 1664450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 8629564 - 8629520
Alignment:
Q  30 ttgtgagactgtttgagatagcttatgaaaacagcttatgacatg 74  Q
    ||||||||| |||||||| | |||||||||||| |||||||||||    
T  8629564 ttgtgagaccgtttgagagaacttatgaaaacaacttatgacatg 8629520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 11415264 - 11415212
Alignment:
Q  28 acttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||| ||||| ||| || ||||| ||||||||||| |||||||||||    
T  11415264 acttgtgagattgttttagagagtttatggaaacagcttataacatgtccata 11415212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 47
Target Start/End: Complemental strand, 12833487 - 12833451
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgaga 47  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  12833487 tatctattggcataagcacttgtgagactgtttgaga 12833451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 43368643 - 43368707
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgt 75  Q
    |||||| | |||||| || ||||||||||| |||  | |||||||||||||| ||||||||||||    
T  43368643 tatctactaacataagcatttgtgagactggttgtaacagcttatgaaaacaacttatgacatgt 43368707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 12407663 - 12407722
Alignment:
Q  1 tattggaacgtatctattgacataaacacttgtgagactgtttgagatagcttatgaaaa 60  Q
    |||| |||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  12407663 tatttgaacttatctattgacataaacacttgtgagacggtttgagagagcttatgaaaa 12407722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 11095438 - 11095507
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||| |||||||||||||||||| | ||||||||| | ||| || |||||||||||||||||||||||    
T  11095438 tatctactgacataaacacttgtgatattgtttgagagaacttgtggaaacagcttatgacatgtccata 11095507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 5377140 - 5377200
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgac 71  Q
    ||||||||||||||| ||||||| |||||||| | |||| |||||||||||||||||||||    
T  5377140 tatctattgacataagcacttgtaagactgttagcgataacttatgaaaacagcttatgac 5377200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 11457225 - 11457156
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||| || ||||||||||||||||||||   | |||||||| ||||| |||||||||||||||||    
T  11457225 tatctattggcagaaacacttgtgagactgttttgaagagcttatggaaacaacttatgacatgtccata 11457156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 10907501 - 10907440
Alignment:
Q  15 tattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtc 76  Q
    ||||| ||| ||||||||||||||||||||  | |||||||||||||| |||||| ||||||    
T  10907501 tattggcatgaacacttgtgagactgtttggaagagcttatgaaaacaacttatgtcatgtc 10907440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 11297139 - 11297204
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtc 76  Q
    |||||| || ||||||||||||| ||||||||||| | |||||||| ||||| |||| ||||||||    
T  11297139 tatctagtggcataaacacttgtaagactgtttgaaagagcttatggaaacaacttaagacatgtc 11297204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 12459951 - 12460015
Alignment:
Q  18 tgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccatatg 82  Q
    |||||||| ||| |||||||||||||| || | | |||||||||| |||||||||||| ||||||    
T  12459951 tgacataagcacctgtgagactgtttgggagaacctatgaaaacaacttatgacatgttcatatg 12460015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 80
Target Start/End: Original strand, 13604825 - 13604861
Alignment:
Q  44 gagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||| ||||||||||||||||||||||||||||||||    
T  13604825 gagagagcttatgaaaacagcttatgacatgtccata 13604861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 37611175 - 37611227
Alignment:
Q  28 acttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||| ||||||||| |||||||||||||| ||| |||||||| ||||    
T  37611175 acttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcata 37611227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 37787905 - 37787957
Alignment:
Q  28 acttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||| ||||||||| |||||||||||||| ||| |||||||| ||||    
T  37787905 acttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcata 37787957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 38047839 - 38047891
Alignment:
Q  28 acttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||| ||||||||| || |||||||| ||||| |||||||||||||||||    
T  38047839 acttgtgtgactgtttgggagagcttatggaaacaacttatgacatgtccata 38047891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 2569648 - 2569707
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||||| | | | |||||||| ||||||| ||| |||||||||||||||||||    
T  2569648 cataaacacttgtaacattttttgagattgcttatggaaatagcttatgacatgtccata 2569707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 4273322 - 4273385
Alignment:
Q  13 tctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtc 76  Q
    ||||||| |||||||| |||||||| ||||||||| | | |||| |||||||||||||| ||||    
T  4273322 tctattggcataaacatttgtgagattgtttgagagaacctatggaaacagcttatgacttgtc 4273385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 10152451 - 10152392
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||| ||| ||||||||| |||  || |||||||||||||| |||||||||||||||||    
T  10152451 cataagcacatgtgagactattttggagagcttatgaaaacaacttatgacatgtccata 10152392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 14295611 - 14295568
Alignment:
Q  33 tgagactgtttgagatagcttatgaaaacagcttatgacatgtc 76  Q
    ||||||||| ||||| |||||||||||||||||||||| |||||    
T  14295611 tgagactgtctgagagagcttatgaaaacagcttatgatatgtc 14295568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 14364319 - 14364280
Alignment:
Q  41 tttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||| |||||||| |||||||||||||||||||||||    
T  14364319 tttgagaaagcttatggaaacagcttatgacatgtccata 14364280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 15905361 - 15905404
Alignment:
Q  29 cttgtgagactgtttgagatagcttatgaaaacagcttatgaca 72  Q
    ||||||||| | ||||||| ||||||||||||||||||||||||    
T  15905361 cttgtgagagtctttgagagagcttatgaaaacagcttatgaca 15905404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 32172770 - 32172711
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||| |||||||||||  ||||| || |||||||| ||||| |||||||||||||||||    
T  32172770 cataagcacttgtgagatagtttgggagagcttatggaaacaacttatgacatgtccata 32172711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 38728529 - 38728466
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatg 74  Q
    |||||||||  |||||||| |||| || |||||| || |||||||||||| |||||||||||||    
T  38728529 tatctattggtataaacacctgtgtgattgtttgggagagcttatgaaaatagcttatgacatg 38728466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 72
Target Start/End: Original strand, 16457940 - 16457982
Alignment:
Q  30 ttgtgagactgtttgagatagcttatgaaaacagcttatgaca 72  Q
    ||||||||||||||| || | ||||||||||||||||||||||    
T  16457940 ttgtgagactgtttgggagaacttatgaaaacagcttatgaca 16457982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 19177104 - 19177046
Alignment:
Q  22 ataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||||| ||| ||||||||| |||| ||||||||| |  ||||||||||||||    
T  19177104 ataaacacttgtcagattgtttgagagagctaatgaaaacaaccgatgacatgtccata 19177046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 80
Target Start/End: Original strand, 21768179 - 21768209
Alignment:
Q  50 gcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||||||||||||||||||||||||    
T  21768179 gcttatgaaaacagcttatgacatgtccata 21768209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 21782599 - 21782645
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatga 57  Q
    |||||| || |||||||||||||||| |||||||||| |||||||||    
T  21782599 tatctactggcataaacacttgtgaggctgtttgagagagcttatga 21782645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 26516524 - 26516466
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccat 79  Q
    ||||| ||| |||| || ||||| ||| |||||||||||||||||||||| ||||||||    
T  26516524 cataagcacctgtgggaatgtttaagagagcttatgaaaacagcttatgatatgtccat 26516466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 29336757 - 29336699
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatg 69  Q
    ||||||||| || || |||||||||||||| |||||| |||||||| ||||| ||||||    
T  29336757 tatctattggcaaaagcacttgtgagactgattgagagagcttatggaaacaacttatg 29336699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 40534319 - 40534257
Alignment:
Q  18 tgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||||||||||| |||||||  || |||||||| ||  |||||||||||||| ||||    
T  40534319 tgacataaacacttgtgatactgtttaggagagcttatggaagtagcttatgacatgttcata 40534257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 499681 - 499738
Alignment:
Q  18 tgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgt 75  Q
    |||||||| ||| ||| || ||||||| || | |||||||||||||||||||||||||    
T  499681 tgacataagcacctgttaggctgtttgggagaacttatgaaaacagcttatgacatgt 499738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 4855815 - 4855778
Alignment:
Q  18 tgacataaacacttgtgagactgtttgagatagcttat 55  Q
    |||| ||||||||||||||||||||||||| |||||||    
T  4855815 tgacttaaacacttgtgagactgtttgagagagcttat 4855778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 13244494 - 13244551
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttat 68  Q
    |||||||||| |||||||||| ||| ||||||||  | |||||||||||||| |||||    
T  13244494 tatctattgaaataaacacttatgacactgtttggaagagcttatgaaaacaacttat 13244551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 13605316 - 13605385
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||| |||||||| |||||||||| |  ||||||| ||| |||| ||||||||||||| |||| ||||    
T  13605316 tatctagtgacataaccacttgtgagtccatttgagaaagcctatgcaaacagcttatgaaatgtacata 13605385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 25720360 - 25720429
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||| || ||||| ||||||||||||||| ||||| ||||||| ||||||  | ||||||||| ||||    
T  25720360 tatctactggcataagcacttgtgagactgtctgagagagcttataaaaacaattcatgacatgttcata 25720429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 37526161 - 37526206
Alignment:
Q  30 ttgtgagactgtttgagatagcttatgaaaacagcttatgacatgt 75  Q
    |||||||||||||||||| |||||||||| ||| | ||||||||||    
T  37526161 ttgtgagactgtttgagagagcttatgaatacaacctatgacatgt 37526206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 37690598 - 37690643
Alignment:
Q  30 ttgtgagactgtttgagatagcttatgaaaacagcttatgacatgt 75  Q
    |||||||||||||||||| |||||||||| ||| | ||||||||||    
T  37690598 ttgtgagactgtttgagagagcttatgaatacaacctatgacatgt 37690643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 44014751 - 44014810
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||| ||| ||||    
T  44014751 cataaacacttgtgagactgtttgagaaaacttatgaaaacagcttatgacctgttcata 44014810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 21872238 - 21872307
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||| |||||||| ||||||||||||||||||  | ||||| |||||| |||||||||||||||||||    
T  21872238 tatctactgacataagcacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccata 21872307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 25182947 - 25182999
Alignment:
Q  28 acttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||||||||||||| |||||||||||||| |||||||||| ||||||    
T  25182947 acttgtgagactgtttgagagagcttatgaaaacaacttatgacatatccata 25182999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 50016013 - 50015949
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgt 75  Q
    ||||||||| ||||||||||||||||||||||||||| | |||||||||| | | ||||||||||    
T  50016013 tatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 50015949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 24624342 - 24624268
Alignment:
Q  6 gaacgtatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||| |||||| | |||| | ||||||| ||||||||||  | ||||||||||||||||||||||||||||||||    
T  24624342 gaacttatctactcacattagcacttgtaagactgtttggaagagcttatgaaaacagcttatgacatgtccata 24624268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 47584582 - 47584528
Alignment:
Q  6 gaacgtatctattgacataaacacttgtgagactgtttgagatagcttatgaaaa 60  Q
    |||| ||||||||||||||| ||||||||||||| ||||||| ||||||||||||    
T  47584582 gaacctatctattgacataagcacttgtgagactatttgagagagcttatgaaaa 47584528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 20192549 - 20192618
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||||||| ||||| | | ||||| ||||| |||||||  |||||||||||||||||||||||    
T  20192549 tatctattgacataagcacttcttacactgtatgagagagcttatagaaacagcttatgacatgtccata 20192618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 43115183 - 43115114
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||||||| ||||||||||| ||||||  | || ||||| ||||| |||||||||||||||||    
T  43115183 tatctattgacataatcacttgtgagattgtttggaagagtttatggaaacaacttatgacatgtccata 43115114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 1810095 - 1810036
Alignment:
Q  20 acataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccat 79  Q
    |||||| ||||||||||||| ||||||| |||||| | ||||| ||||||||||||||||    
T  1810095 acataatcacttgtgagactatttgagagagcttacggaaacaacttatgacatgtccat 1810036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 2100135 - 2100186
Alignment:
Q  24 aaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgt 75  Q
    ||||||||||||||||||||| || |||||||| | ||||||||||||||||    
T  2100135 aaacacttgtgagactgtttgtgagagcttatggagacagcttatgacatgt 2100186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 2413623 - 2413690
Alignment:
Q  12 atctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccat 79  Q
    |||||||  ||||| ||||||| || |||||||||| ||||||||||||| ||| |||||||||||||    
T  2413623 atctattagcataatcacttgtaagtctgtttgagagagcttatgaaaacggctcatgacatgtccat 2413690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 37273251 - 37273192
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||| |||| ||||||||||||| || |||||||| ||||| |||||||||||||||||    
T  37273251 cataagcactggtgagactgtttgggagagcttatggaaacaacttatgacatgtccata 37273192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 40880891 - 40880954
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatg 74  Q
    |||||||||| || ||||   |||||||||||||||| |||||||||||||| |||||||||||    
T  40880891 tatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatg 40880954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 14548680 - 14548726
Alignment:
Q  27 cacttgtgagactgtttgagatagcttatgaaaacagcttatgacat 73  Q
    ||||||||||||||||||||| |||||||||||||| | ||||||||    
T  14548680 cacttgtgagactgtttgagagagcttatgaaaacaacgtatgacat 14548726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 22667530 - 22667468
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacat 73  Q
    |||||| |||||||| ||||||||||||||||||||| || ||||| ||||||| ||| ||||    
T  22667530 tatctactgacataagcacttgtgagactgtttgagagagtttatggaaacagcatataacat 22667468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 22724169 - 22724107
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacat 73  Q
    |||||| |||||||| ||||||||||||||||||||| || ||||| ||||||| ||| ||||    
T  22724169 tatctactgacataagcacttgtgagactgtttgagagagtttatggaaacagcatataacat 22724107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 20210871 - 20210936
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtc 76  Q
    |||||| |||||||| ||||||||||||||||||||| | |||||| |||| | |||||| |||||    
T  20210871 tatctactgacataaccacttgtgagactgtttgagagatcttatgcaaacggattatgatatgtc 20210936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 30923846 - 30923906
Alignment:
Q  15 tattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtc 76  Q
    |||||| ||||||||||||||||||||||  || ||| |||| |||||||||||||||||||    
T  30923846 tattgatataaacacttgtgagactgtttatgagagc-tatggaaacagcttatgacatgtc 30923906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 659820 - 659872
Alignment:
Q  28 acttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||||||||| || |||| ||  |||||||||||||||||||||||    
T  659820 acttgtgagactgtttgtgagagctaatagaaacagcttatgacatgtccata 659872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 2175808 - 2175856
Alignment:
Q  27 cacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgt 75  Q
    ||||||| ||||| |||||||||| ||||||||||| ||||||||||||    
T  2175808 cacttgtaagactatttgagatagtttatgaaaacaacttatgacatgt 2175856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 20194986 - 20195038
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacat 73  Q
    ||||| || ||||||||||||||| || ||||||||||||||| |||||||||    
T  20194986 cataagcagttgtgagactgtttgtgagagcttatgaaaacagtttatgacat 20195038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 38971385 - 38971321
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgt 75  Q
    |||||| || ||||| ||||||||||||||| |||||||| || ||||||||| |||| ||||||    
T  38971385 tatctactggcataagcacttgtgagactgtctgagatagtttttgaaaacagtttataacatgt 38971321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 21574595 - 21574548
Alignment:
Q  33 tgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||||| || |||||||||||||| |||||||||||| ||||    
T  21574595 tgagactgtttgggagagcttatgaaaacaacttatgacatgttcata 21574548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 27290850 - 27290913
Alignment:
Q  17 ttgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||| |||| ||||||| ||||||   | |||||||||||||||||||||||||| |||||    
T  27290850 ttgacatcaacaattgtgaggctgtttcgaagagcttatgaaaacagcttatgacatgcccata 27290913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 49
Target Start/End: Complemental strand, 31762384 - 31762353
Alignment:
Q  18 tgacataaacacttgtgagactgtttgagata 49  Q
    ||||||||||||||||||||||||||||||||    
T  31762384 tgacataaacacttgtgagactgtttgagata 31762353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 34707457 - 34707508
Alignment:
Q  29 cttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||||||||||| | ||| |||||||| ||| |||||||||||||    
T  34707457 cttgtgagactgtttgagagaacttttgaaaacaacttgtgacatgtccata 34707508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 41724349 - 41724270
Alignment:
Q  1 tattggaacgtatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||| |||| |||||| ||||||||  |||||| |||| ||||| || | |||||| ||||| |||||||||||||||||    
T  41724349 tatttgaacttatctactgacataagtacttgtcagacagtttgtgaaaacttatggaaacaacttatgacatgtccata 41724270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 49772621 - 49772680
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||| ||||||||||||  || |||||||| ||||| ||||||| |||||||||    
T  49772621 cataaacactagtgagactgtttaggagagcttatggaaacaacttatgagatgtccata 49772680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 11039301 - 11039351
Alignment:
Q  30 ttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||||||||| | |||||||| |||||  ||||||||||||||||    
T  11039301 ttgtgagactgtttgaaagagcttatggaaacatattatgacatgtccata 11039351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 24281163 - 24281105
Alignment:
Q  22 ataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||| |||||||| || ||||||||| |||||||||||||| ||||||| || ||||||    
T  24281163 ataagcacttgtgtgattgtttgagagagcttatgaaaacaacttatgatatctccata 24281105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 31710820 - 31710898
Alignment:
Q  1 tattggaacgtatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccat 79  Q
    |||| |||| ||||||  |||||||  ||||||||| ||||||| || ||||||| |||||| ||||||||||| ||||    
T  31710820 tatttgaacttatctaccgacataagaacttgtgagtctgtttgtgaaagcttataaaaacaacttatgacatgcccat 31710898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 31711075 - 31711153
Alignment:
Q  1 tattggaacgtatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccat 79  Q
    |||| |||| ||||||  |||||||  ||||||||| ||||||| || ||||||| |||||| ||||||||||| ||||    
T  31711075 tatttgaacttatctaccgacataagaacttgtgagtctgtttgtgaaagcttataaaaacaacttatgacatgcccat 31711153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 34383058 - 34383004
Alignment:
Q  22 ataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtc 76  Q
    |||||||||| | || ||||||||||||||||||| |||||| |||||| |||||    
T  34383058 ataaacacttttaagtctgtttgagatagcttatggaaacagattatgatatgtc 34383004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 80
Target Start/End: Original strand, 42817192 - 42817234
Alignment:
Q  38 ctgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||| |||||||| ||||||| |||||||||||||||    
T  42817192 ctgtttgagagagcttatggaaacagcatatgacatgtccata 42817234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 45541687 - 45541629
Alignment:
Q  22 ataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||||| |||||||||   | | ||||||||||||||||||||||||| ||||    
T  45541687 ataaacacttgtaagactgtttagaagaacttatgaaaacagcttatgacatgttcata 45541629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 2152132 - 2152185
Alignment:
Q  22 ataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgt 75  Q
    |||| |||||||||||||  ||||||||  ||||||||||| ||||||||||||    
T  2152132 ataagcacttgtgagactaattgagatattttatgaaaacaacttatgacatgt 2152185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 3776352 - 3776393
Alignment:
Q  30 ttgtgagactgtttgagatagcttatgaaaacagcttatgac 71  Q
    |||||||| ||||||||| | |||||||||||||||||||||    
T  3776352 ttgtgagaatgtttgagagaacttatgaaaacagcttatgac 3776393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 11040557 - 11040626
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||| | |||||||||||| | | |||| |||||| ||| |||||||||||  |||||||||||||||    
T  11040557 tatctactcacataaacacttctaatactgattgagagagcatatgaaaacagagtatgacatgtccata 11040626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 27294473 - 27294432
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagct 52  Q
    ||||||||| ||||| ||||||||||||||||||||| ||||    
T  27294473 tatctattgtcataagcacttgtgagactgtttgagagagct 27294432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 27792999 - 27792938
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgaca 72  Q
    |||||||||||||||||||  |||||||||||||| | || ||||| ||| ||||| |||||    
T  27792999 tatctattgacataaacacacgtgagactgtttgatagagtttatggaaatagcttttgaca 27792938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 38975843 - 38975908
Alignment:
Q  15 tattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||| ||||||| ||||| |||||||||||| |||||||   ||||| ||||||||| ||||||    
T  38975843 tattgaaataaacatttgtgtgactgtttgagagagcttataggaacagtttatgacatatccata 38975908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 39971434 - 39971354
Alignment:
Q  1 tattggaacgtatctattgacataaacacttgtgagactgtttga-gatagcttatgaaaacagcttatgacatgtccatat 81  Q
    |||| |||| || |||||||||||||||||||||||||| ||||| || || ||||||||| | ||||||  ||||||||||    
T  39971434 tatttgaacttagctattgacataaacacttgtgagact-tttgaggagagtttatgaaaataacttatggaatgtccatat 39971354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 39980838 - 39980797
Alignment:
Q  30 ttgtgagactgtttgagatagcttatgaaaacagcttatgac 71  Q
    |||||||||||||| ||| | |||||||||||||||||||||    
T  39980838 ttgtgagactgtttaagagaacttatgaaaacagcttatgac 39980797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 50211862 - 50211805
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttat 68  Q
    |||||| | |||||| ||||||| ||||||||||||| | |||||||||||| |||||    
T  50211862 tatctactaacataagcacttgtaagactgtttgagagaacttatgaaaacaacttat 50211805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 30444000 - 30443960
Alignment:
Q  32 gtgagactgtttgagatagcttatgaaaacagcttatgaca 72  Q
    |||||||||||||  | ||||||||||||||||||||||||    
T  30444000 gtgagactgtttggtagagcttatgaaaacagcttatgaca 30443960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 42530377 - 42530315
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagc---ttatgacatgtccata 80  Q
    ||||| ||||||||||||||||| ||| |||||||| ||| |||   ||||||||||||||||    
T  42530377 cataagcacttgtgagactgtttcagaaagcttatggaaatagcttattatgacatgtccata 42530315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 48807816 - 48807764
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacat 73  Q
    ||||||||||||||||||| ||| | | ||||||||||||  |||||||||||    
T  48807816 cataaacacttgtgagactctttcacagagcttatgaaaatggcttatgacat 48807764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 53735922 - 53735982
Alignment:
Q  18 tgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtcca 78  Q
    |||||||||||||  ||||| ||||||||| | |||||  ||||| |||||||||||||||    
T  53735922 tgacataaacactaatgagattgtttgagagaacttattgaaacaacttatgacatgtcca 53735982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 787459 - 787390
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||| || ||||| ||||||||| |||||||| || | ||||||||||||||||||||||||||||||    
T  787459 tatctactggcataagcacttgtgacactgtttgtgagaacttatgaaaacagcttatgacatgtccata 787390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 1318353 - 1318296
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtcca 78  Q
    ||||| |||||||||||||||||| || |||||||||||||| |||||||||||||||    
T  1318353 cataagcacttgtgagactgtttgtgagagcttatgaaaacatcttatgacatgtcca 1318296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 80
Target Start/End: Original strand, 1494415 - 1494458
Alignment:
Q  37 actgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  1494415 actgtttgagagagcttatgaaaacagcttatgacatgtccata 1494458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 5902502 - 5902561
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||||||||||||||||  | | ||||||||||||||||||||||||| ||||    
T  5902502 cataaacacttgtgagactgtttggaagaacttatgaaaacagcttatgacatgttcata 5902561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 29430885 - 29430817
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccat 79  Q
    |||||| ||||||||||||||||| |||| ||||  | | |||||||||| ||||||||||||||||||    
T  29430885 tatctactgacataaacacttgtgggactatttggaagaacttatgaaaatagcttatgacatgtccat 29430817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 43456659 - 43456719
Alignment:
Q  20 acataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||||||| ||||||||||| | ||||| |||||||| || ||||||||||||||    
T  43456659 acataaacacttgtaagactgtttgaaagagcttgtgaaaacaactcatgacatgtccata 43456719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 4350815 - 4350748
Alignment:
Q  13 tctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||| |||||||| |||||  |||| ||||||||| | ||||||||||||||||||||||||| ||||    
T  4350815 tctactgacataagcacttaagagattgtttgagagaacttatgaaaacagcttatgacatgttcata 4350748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 13867005 - 13866942
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatg 74  Q
    |||||| || ||||||||||||||||||||||||||| | |||| ||||||| | |||||||||    
T  13867005 tatctactgccataaacacttgtgagactgtttgagagaacttaagaaaacaacctatgacatg 13866942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 32837433 - 32837382
Alignment:
Q  28 acttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccat 79  Q
    ||||||||||||||||| || | |||||||||||||||||| ||||||||||    
T  32837433 acttgtgagactgtttgggagaacttatgaaaacagcttataacatgtccat 32837382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 40944040 - 40943977
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatg 74  Q
    |||||| |||||||| ||||||||| ||||||||  | || |||||||||||||||||||||||    
T  40944040 tatctaatgacataagcacttgtgaaactgtttggaaaagtttatgaaaacagcttatgacatg 40943977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 2964762 - 2964816
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgt 75  Q
    |||||||||||| |||| ||||||||  | |||||||||||||||||||||||||    
T  2964762 cataaacacttgcgagaatgtttgagtgaacttatgaaaacagcttatgacatgt 2964816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 18884996 - 18884926
Alignment:
Q  9 cgtatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccat 79  Q
    |||||||||||||||||  |||||| || ||||||| || |||||||  |||||||||||||||| |||||    
T  18884996 cgtatctattgacataagaacttgtaaggctgtttgggagagcttatagaaacagcttatgacatttccat 18884926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 5759518 - 5759586
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||  ||||  ||||||||||||||||| || |||||||| |||||||||| ||||||||||||    
T  5759518 tatctattggtataagtacttgtgagactgtttgggagagcttatggaaacagctta-gacatgtccata 5759586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 8017561 - 8017492
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||||||| |||||||| || | |||| || | |||||||||||||||||||| |||| ||||    
T  8017561 tatctattgacataagcacttgtgcgattatttgggagaacttatgaaaacagcttatgatatgttcata 8017492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 43808678 - 43808621
Alignment:
Q  18 tgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgt 75  Q
    ||||||||| |||||| ||||| ||||||| |||||||||||| | ||||||||||||    
T  43808678 tgacataaatacttgtaagactatttgagagagcttatgaaaataacttatgacatgt 43808621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 43985336 - 43985267
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||| |||||||||||||||| | ||||||||||| || |||   ||||| |||||||||||||||||    
T  43985336 tatctactgacataaacacttgtaaaactgtttgagagagattactgaaacaacttatgacatgtccata 43985267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 37474891 - 37474824
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccat 79  Q
    |||||||| |||||||||||| ||||||| ||||||| |||||||||||||  ||| ||| ||||||||    
T  37474891 tatctatt-acataaacacttatgagactctttgagagagcttatgaaaactacttgtgatatgtccat 37474824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 40158845 - 40158781
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgt 75  Q
    |||||| ||||||||  ||||||||||||| ||| |  | |||||||||||||||||||||||||    
T  40158845 tatctactgacataagaacttgtgagactgattgggggaacttatgaaaacagcttatgacatgt 40158781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 1801785 - 1801726
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||| ||||||||| | |||||| || | ||||||||||||||||||||||||| ||||    
T  1801785 cataagcacttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcata 1801726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 7283117 - 7283054
Alignment:
Q  17 ttgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||||||||||||||| ||||   |||||| || ||||| ||||||| |||||||||    
T  7283117 ttgacataaacacttgtgagactatttggattagcttttggaaacaacttatgatatgtccata 7283054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 11514013 - 11513970
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagc 64  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||||    
T  11514013 cataagcacttgtgagactgttttagagagcttatgaaaacagc 11513970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 73
Target Start/End: Original strand, 27699491 - 27699534
Alignment:
Q  30 ttgtgagactgtttgagatagcttatgaaaacagcttatgacat 73  Q
    |||||||||||||||||| || ||||||||||| ||||||||||    
T  27699491 ttgtgagactgtttgagagagtttatgaaaacaacttatgacat 27699534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 28803483 - 28803542
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||| ||| ||||||||||||||||| | | |||| ||||| |||||||||||||||||    
T  28803483 cataagcacatgtgagactgtttgagagaacatatggaaacaacttatgacatgtccata 28803542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 36677773 - 36677722
Alignment:
Q  17 ttgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttat 68  Q
    ||||||||| ||||||||||||| ||  ||| ||||||||||||||||||||    
T  36677773 ttgacataagcacttgtgagactattcaagagagcttatgaaaacagcttat 36677722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 38077018 - 38077085
Alignment:
Q  13 tctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||| |||||||||||||||||| ||||||||| | ||| | |||||| |||| ||||| ||||||    
T  38077018 tctattcacataaacacttgtgagattgtttgagagaacttcttaaaacaacttacgacatttccata 38077085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 9556367 - 9556297
Alignment:
Q  10 gtatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||  |||||||| ||| ||| ||| ||| || |||||||||||||| || ||||||||||||||    
T  9556367 gtatctattagcataaacaattgcgagtctgattgggagagcttatgaaaacaactaatgacatgtccata 9556297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 33192321 - 33192260
Alignment:
Q  18 tgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||||||  ||||||||||||| | | ||||||||||||| ||||||||| ||||||    
T  33192321 tgacataaacactcatgagactgtttga-agaacttatgaaaacagtttatgacatatccata 33192260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 68
Target Start/End: Complemental strand, 36534877 - 36534839
Alignment:
Q  30 ttgtgagactgtttgagatagcttatgaaaacagcttat 68  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  36534877 ttgtgagactgtttgggataacttatgaaaacagcttat 36534839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 38259638 - 38259688
Alignment:
Q  19 gacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatg 69  Q
    ||||||||||||| ||||||| ||||| |||||||||| ||||| ||||||    
T  38259638 gacataaacacttctgagactctttgaaatagcttatggaaacaacttatg 38259688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 41851118 - 41851176
Alignment:
Q  22 ataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||| ||||||||  ||||||| | |||||| | |||||||||||||||||||||||    
T  41851118 ataaacccttgtgagtttgtttgaaagagcttacggaaacagcttatgacatgtccata 41851176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 10567182 - 10567121
Alignment:
Q  13 tctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatg 74  Q
    |||||||||||||  ||| ||||||||||||| || || || || |||||||||||||||||    
T  10567182 tctattgacataagtactcgtgagactgtttgggagagattgtggaaacagcttatgacatg 10567121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 13234633 - 13234564
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||| |||| ||||| ||||||| |||||||||||||  |||||  ||||||  ||||||||||||||||    
T  13234633 tatcaattggcataagcacttgtaagactgtttgagagtgcttacaaaaacacattatgacatgtccata 13234564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 40400843 - 40400900
Alignment:
Q  11 tatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttat 68  Q
    |||||| ||||||||| |||||||| | ||||||| | | ||||||||||||||||||    
T  40400843 tatctactgacataaagacttgtgacattgtttgaaaaaacttatgaaaacagcttat 40400900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 44606057 - 44606122
Alignment:
Q  15 tattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||||  ||||||  |||||||||  | | |||||||||||| |||||||||||||||||    
T  44606057 tattgacataagtacttgtacgactgtttggaagaacttatgaaaacaacttatgacatgtccata 44606122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 6993684 - 6993736
Alignment:
Q  28 acttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||||||||||| | | |||||| ||| |||||||| ||||||||||    
T  6993684 acttgtgagactgtttgatagaacttatgtaaatagcttatggcatgtccata 6993736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 9478409 - 9478357
Alignment:
Q  28 acttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||| |||||||||||| || ||||| ||||| ||||| |||||||||||    
T  9478409 acttgtgtgactgtttgagagagtttatgcaaacaacttattacatgtccata 9478357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 11344730 - 11344782
Alignment:
Q  28 acttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||| ||||||||| | | |||||| ||||| |||||||||||||||||    
T  11344730 acttgtgaaactgtttgacagaccttatggaaacaacttatgacatgtccata 11344782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 32106764 - 32106804
Alignment:
Q  33 tgagactgtttgagatagcttatgaaaacagcttatgacat 73  Q
    |||||||||||| || | |||||||||||||||||||||||    
T  32106764 tgagactgtttgtgagaacttatgaaaacagcttatgacat 32106804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 33256850 - 33256798
Alignment:
Q  28 acttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||| ||||| | |||| || ||||||||||||||||||||||||||| ||||    
T  33256850 acttctgagaatttttgggagagcttatgaaaacagcttatgacatgttcata 33256798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 34651996 - 34652048
Alignment:
Q  28 acttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||| ||| |||| |||||||  ||||| |||||||||||||||||    
T  34651996 acttgtgagacggttggagaaagcttatagaaacaacttatgacatgtccata 34652048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 43065402 - 43065462
Alignment:
Q  20 acataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||||||||||||||   ||  ||| || |||||||||||||| |||||||||||||||||    
T  43065402 acataaacacttgtgcagctacttgtgagagcttatgaaaacaacttatgacatgtccata 43065462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 10567 - 10629
Alignment:
Q  18 tgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||  |||||||||||||||||| | |||||||| ||||| || ||||||||||||||    
T  10567 tgacataagtacttgtgagactgtttgacaaagcttatgtaaacaactaatgacatgtccata 10629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 4043 - 3964
Alignment:
Q  1 tattggaacgtatctattgacataaacacttgtgagactgtttgagatagcttatgaaaacagcttatgacatgtccata 80  Q
    |||| |||| ||| |||||| |||| ||||||||||||||||||  | || ||||| |||| ||| ||||||||||||||    
T  4043 tatttgaacttatatattgatataagcacttgtgagactgtttggaagagtttatggaaacggctcatgacatgtccata 3964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 80
Target Start/End: Complemental strand, 5046 - 5017
Alignment:
Q  51 cttatgaaaacagcttatgacatgtccata 80  Q
    ||||||||||||||||||||||||||||||    
T  5046 cttatgaaaacagcttatgacatgtccata 5017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 6927 - 6891
Alignment:
Q  21 cataaacacttgtgagactgtttgagatagcttatga 57  Q
    |||||||||||||||||||||||| || |||||||||    
T  6927 cataaacacttgtgagactgtttgggagagcttatga 6891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University