View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2977_high_9 (Length: 307)
Name: NF2977_high_9
Description: NF2977
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2977_high_9 |
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Alignment Details
Target: chr2 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 6023319 - 6023028
Alignment:
| Q |
1 |
tttgatccctgcttagcaaaaaccaaccaacaccagaataaaaaacaacgnnnnnnngagaagaatttaattgatatttactatgaccttaaagtagtgg |
100 |
Q |
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| T |
6023319 |
tttgatccctgcttagcaaaaaccaaccaacaccagaataaaaaacaacgaaaaaaagagaagaatttaattgatatttactatgaccttaaagtagtgg |
6023220 |
T |
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| Q |
101 |
ctccgtgggaaacaagtatctaaatatagaacaaaataaaagaactgaacttacactcaatgctgagaatccactttccctccagaatacccagcaatac |
200 |
Q |
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| T |
6023219 |
ctctgtgggaaacaagtatctaaatatagaacaaaataaaagaactgaacttacactcaatgctgagaatccactttccctccagaatacccaacaatac |
6023120 |
T |
|
| Q |
201 |
tttgagagtccttctgcatgccccattttcatctgttgatgctattacatgggtaacacctgaatcccaagttttcagaactgtaaccttcg |
292 |
Q |
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| T |
6023119 |
tttgagagtccttctgcatgccccattttcatctgttgatgctattacatgggtaacacctgaatcccaagttttcagaactgtaaccttcg |
6023028 |
T |
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