View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2977_low_4 (Length: 488)

Name: NF2977_low_4
Description: NF2977
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2977_low_4
NF2977_low_4
[»] chr3 (83 HSPs)
chr3 (14-147)||(31857518-31857651)
chr3 (309-461)||(35412727-35412878)
chr3 (309-459)||(54461232-54461381)
chr3 (315-434)||(10106450-10106571)
chr3 (358-461)||(8461315-8461414)
chr3 (368-461)||(20728457-20728546)
chr3 (368-440)||(52309461-52309533)
chr3 (309-385)||(18641670-18641749)
chr3 (309-385)||(18644666-18644745)
chr3 (370-461)||(10902237-10902322)
chr3 (368-461)||(16244168-16244255)
chr3 (368-461)||(49742731-49742818)
chr3 (368-439)||(25584972-25585041)
chr3 (370-440)||(10881777-10881845)
chr3 (368-461)||(2775780-2775867)
chr3 (368-461)||(2779022-2779109)
chr3 (368-461)||(43927130-43927222)
chr3 (368-461)||(45896676-45896763)
chr3 (368-440)||(41977296-41977366)
chr3 (368-439)||(3840812-3840881)
chr3 (368-461)||(31549467-31549566)
chr3 (175-217)||(15195597-15195639)
chr3 (174-212)||(30690592-30690630)
chr3 (175-212)||(538683-538720)
chr3 (175-212)||(2775338-2775375)
chr3 (175-212)||(2778581-2778618)
chr3 (175-212)||(2873421-2873458)
chr3 (175-212)||(3840373-3840410)
chr3 (175-212)||(7486427-7486464)
chr3 (175-212)||(9392591-9392628)
chr3 (175-212)||(10881337-10881374)
chr3 (175-212)||(11190383-11190420)
chr3 (175-212)||(16243730-16243767)
chr3 (175-212)||(17040322-17040359)
chr3 (175-212)||(20728947-20728984)
chr3 (175-212)||(22417134-22417171)
chr3 (175-212)||(24125356-24125393)
chr3 (175-212)||(24128633-24128670)
chr3 (175-212)||(25443160-25443197)
chr3 (175-212)||(25584544-25584581)
chr3 (175-212)||(30220309-30220346)
chr3 (175-212)||(32287624-32287661)
chr3 (175-212)||(34984153-34984190)
chr3 (175-212)||(35412372-35412409)
chr3 (175-212)||(43809436-43809473)
chr3 (175-212)||(45896237-45896274)
chr3 (175-212)||(46884809-46884846)
chr3 (175-212)||(49743220-49743257)
chr3 (175-212)||(52199770-52199807)
chr3 (175-212)||(52309858-52309895)
chr3 (175-212)||(52988262-52988299)
chr3 (175-212)||(54719828-54719865)
chr3 (175-212)||(54723598-54723635)
chr3 (175-212)||(55035160-55035197)
chr3 (400-461)||(28007891-28007948)
chr3 (175-207)||(41976872-41976904)
chr3 (175-212)||(3293261-3293298)
chr3 (175-212)||(6435078-6435115)
chr3 (175-212)||(10106899-10106936)
chr3 (175-212)||(10884715-10884752)
chr3 (179-212)||(11784626-11784659)
chr3 (175-212)||(12561534-12561571)
chr3 (175-212)||(16184988-16185025)
chr3 (175-212)||(17141265-17141302)
chr3 (175-212)||(19301805-19301842)
chr3 (175-212)||(19304989-19305026)
chr3 (175-212)||(22783449-22783486)
chr3 (175-212)||(22787813-22787850)
chr3 (175-212)||(27091751-27091788)
chr3 (175-204)||(28008378-28008407)
chr3 (175-212)||(28265737-28265774)
chr3 (175-212)||(29344175-29344212)
chr3 (175-212)||(31857673-31857710)
chr3 (175-212)||(32367429-32367466)
chr3 (179-212)||(35751315-35751348)
chr3 (179-212)||(47051356-47051389)
chr3 (179-212)||(47054786-47054819)
chr3 (175-212)||(48064335-48064372)
chr3 (179-212)||(50461849-50461882)
chr3 (312-341)||(52200133-52200162)
chr3 (175-212)||(53815685-53815722)
chr3 (175-207)||(8461792-8461824)
chr3 (358-390)||(32287210-32287242)
[»] chr7 (43 HSPs)
chr7 (14-139)||(13450181-13450307)
chr7 (368-461)||(35961295-35961384)
chr7 (358-461)||(13449619-13449719)
chr7 (376-471)||(10345379-10345470)
chr7 (368-461)||(26557696-26557783)
chr7 (368-461)||(9864573-9864662)
chr7 (368-461)||(4542994-4543081)
chr7 (368-461)||(4595839-4595926)
chr7 (368-440)||(4547066-4547136)
chr7 (368-440)||(4695678-4695748)
chr7 (372-463)||(22611561-22611646)
chr7 (368-461)||(8277184-8277271)
chr7 (368-439)||(11919712-11919782)
chr7 (175-216)||(10468903-10468944)
chr7 (368-408)||(17731011-17731051)
chr7 (175-212)||(4596327-4596364)
chr7 (175-212)||(4695283-4695320)
chr7 (175-212)||(5242471-5242508)
chr7 (175-212)||(9133078-9133115)
chr7 (175-212)||(17730573-17730610)
chr7 (175-212)||(23225224-23225261)
chr7 (175-212)||(26136446-26136483)
chr7 (175-212)||(26144826-26144863)
chr7 (175-212)||(26557259-26557296)
chr7 (23-139)||(30058436-30058552)
chr7 (175-216)||(37415739-37415780)
chr7 (175-216)||(37423271-37423312)
chr7 (174-212)||(14683762-14683800)
chr7 (175-212)||(3068295-3068332)
chr7 (179-212)||(6603221-6603254)
chr7 (175-212)||(7227286-7227323)
chr7 (179-212)||(8276748-8276781)
chr7 (175-212)||(9273438-9273475)
chr7 (179-212)||(13450094-13450127)
chr7 (175-212)||(13809831-13809868)
chr7 (179-212)||(13842403-13842436)
chr7 (179-212)||(16165511-16165544)
chr7 (175-212)||(22611925-22611962)
chr7 (175-212)||(37166465-37166502)
chr7 (175-212)||(45287387-45287424)
chr7 (175-212)||(45290732-45290769)
chr7 (179-207)||(9080940-9080968)
chr7 (312-397)||(48645596-48645682)
[»] chr5 (46 HSPs)
chr5 (309-461)||(22936775-22936927)
chr5 (368-461)||(30066519-30066608)
chr5 (368-461)||(7271226-7271315)
chr5 (368-459)||(39192540-39192625)
chr5 (368-440)||(4099378-4099448)
chr5 (368-440)||(28787172-28787249)
chr5 (368-461)||(33552331-33552418)
chr5 (368-461)||(34831974-34832061)
chr5 (368-461)||(41876589-41876676)
chr5 (309-353)||(14375741-14375785)
chr5 (175-216)||(18952465-18952506)
chr5 (175-216)||(41877074-41877115)
chr5 (358-461)||(43491940-43492044)
chr5 (175-212)||(2837075-2837112)
chr5 (175-212)||(11959483-11959520)
chr5 (175-212)||(12087730-12087767)
chr5 (175-212)||(17664324-17664361)
chr5 (175-212)||(17748212-17748249)
chr5 (175-212)||(22937251-22937288)
chr5 (175-212)||(23043936-23043973)
chr5 (175-212)||(26292563-26292600)
chr5 (175-212)||(26753015-26753052)
chr5 (175-212)||(28441448-28441485)
chr5 (175-212)||(28787636-28787673)
chr5 (312-373)||(31575553-31575614)
chr5 (175-212)||(31863471-31863508)
chr5 (175-212)||(34133296-34133333)
chr5 (175-212)||(34143527-34143564)
chr5 (175-212)||(34831535-34831572)
chr5 (175-212)||(40583021-40583058)
chr5 (175-212)||(42062693-42062730)
chr5 (175-207)||(4099840-4099872)
chr5 (175-207)||(21333000-21333032)
chr5 (175-207)||(30066114-30066146)
chr5 (177-212)||(32837794-32837829)
chr5 (178-212)||(14376121-14376155)
chr5 (175-212)||(7270788-7270825)
chr5 (179-212)||(7624878-7624911)
chr5 (175-212)||(12058805-12058842)
chr5 (179-212)||(14016452-14016485)
chr5 (175-212)||(26907768-26907805)
chr5 (175-212)||(33551893-33551930)
chr5 (175-212)||(41306840-41306877)
chr5 (175-212)||(43491527-43491564)
chr5 (176-212)||(20055547-20055583)
chr5 (66-139)||(31863346-31863421)
[»] chr8 (36 HSPs)
chr8 (308-461)||(43681709-43681861)
chr8 (312-461)||(18721121-18721268)
chr8 (368-461)||(14421937-14422027)
chr8 (368-461)||(22173767-22173854)
chr8 (368-461)||(12583218-12583305)
chr8 (368-461)||(23597405-23597492)
chr8 (175-216)||(8911416-8911457)
chr8 (368-461)||(20887742-20887829)
chr8 (358-461)||(23644001-23644105)
chr8 (175-212)||(14421513-14421550)
chr8 (175-212)||(16953545-16953582)
chr8 (175-212)||(17930750-17930787)
chr8 (175-212)||(18721595-18721632)
chr8 (175-212)||(23613309-23613346)
chr8 (175-212)||(23619677-23619714)
chr8 (175-212)||(25230849-25230886)
chr8 (175-212)||(25594971-25595008)
chr8 (175-212)||(30784698-30784735)
chr8 (175-212)||(31284439-31284476)
chr8 (175-212)||(38248712-38248749)
chr8 (175-212)||(45155583-45155620)
chr8 (400-461)||(5980127-5980184)
chr8 (177-212)||(23643590-23643625)
chr8 (175-206)||(25591798-25591829)
chr8 (315-397)||(5538674-5538757)
chr8 (175-212)||(5614041-5614078)
chr8 (175-212)||(10498527-10498564)
chr8 (175-212)||(12582777-12582814)
chr8 (175-212)||(13196626-13196663)
chr8 (179-212)||(18824708-18824741)
chr8 (179-212)||(18826201-18826234)
chr8 (179-212)||(21280082-21280115)
chr8 (175-204)||(33419425-33419454)
chr8 (179-212)||(36710950-36710983)
chr8 (175-212)||(43682184-43682221)
chr8 (358-390)||(45155175-45155207)
[»] scaffold1063 (1 HSPs)
scaffold1063 (309-461)||(2633-2784)
[»] scaffold0962 (1 HSPs)
scaffold0962 (309-434)||(3145-3272)
[»] chr4 (63 HSPs)
chr4 (309-459)||(12238397-12238544)
chr4 (358-461)||(33408156-33408255)
chr4 (368-461)||(24043964-24044053)
chr4 (370-461)||(49270890-49270977)
chr4 (368-461)||(3720560-3720647)
chr4 (368-461)||(3797650-3797740)
chr4 (368-461)||(40795212-40795299)
chr4 (368-459)||(15429683-15429768)
chr4 (368-459)||(15436297-15436382)
chr4 (309-385)||(5706524-5706603)
chr4 (368-461)||(12786322-12786409)
chr4 (368-439)||(44164992-44165061)
chr4 (376-471)||(19827629-19827718)
chr4 (368-461)||(38283314-38283401)
chr4 (368-461)||(40902908-40902995)
chr4 (368-461)||(52006356-52006443)
chr4 (376-471)||(19820922-19821011)
chr4 (368-461)||(27676880-27676967)
chr4 (309-400)||(15432210-15432302)
chr4 (368-435)||(48415372-48415437)
chr4 (381-440)||(52005606-52005663)
chr4 (312-440)||(5681562-5681700)
chr4 (368-459)||(15445192-15445278)
chr4 (175-212)||(5681199-5681236)
chr4 (175-212)||(8875075-8875112)
chr4 (175-212)||(19820499-19820536)
chr4 (175-212)||(19827261-19827298)
chr4 (175-212)||(21419560-21419597)
chr4 (175-212)||(24044454-24044491)
chr4 (175-212)||(24150443-24150480)
chr4 (175-212)||(25961829-25961866)
chr4 (175-212)||(27014034-27014071)
chr4 (175-212)||(27691457-27691494)
chr4 (175-212)||(29545187-29545224)
chr4 (175-212)||(37103528-37103565)
chr4 (175-212)||(38283802-38283839)
chr4 (175-212)||(39501419-39501456)
chr4 (175-212)||(40493681-40493718)
chr4 (175-212)||(40903397-40903434)
chr4 (175-212)||(48415843-48415880)
chr4 (175-212)||(48637276-48637313)
chr4 (175-212)||(52531249-52531286)
chr4 (175-207)||(8448861-8448893)
chr4 (175-207)||(49270454-49270486)
chr4 (175-205)||(52006851-52006881)
chr4 (175-212)||(3718895-3718932)
chr4 (175-204)||(12238039-12238068)
chr4 (179-212)||(15405398-15405431)
chr4 (175-212)||(15430169-15430206)
chr4 (175-212)||(15436783-15436820)
chr4 (179-212)||(15812451-15812484)
chr4 (175-204)||(18673392-18673421)
chr4 (175-212)||(18911325-18911362)
chr4 (175-212)||(27677368-27677405)
chr4 (179-212)||(29324600-29324633)
chr4 (175-212)||(33408631-33408668)
chr4 (175-212)||(34018095-34018132)
chr4 (179-212)||(34320231-34320264)
chr4 (175-212)||(35509736-35509773)
chr4 (179-212)||(56195302-56195335)
chr4 (180-212)||(5670342-5670374)
chr4 (180-212)||(5672660-5672692)
chr4 (400-461)||(35510221-35510278)
[»] chr1 (29 HSPs)
chr1 (358-461)||(42022828-42022927)
chr1 (368-461)||(2405721-2405808)
chr1 (368-466)||(6070788-6070883)
chr1 (368-466)||(49852958-49853050)
chr1 (368-440)||(21111000-21111070)
chr1 (368-461)||(41058127-41058214)
chr1 (368-461)||(45941628-45941715)
chr1 (175-212)||(673386-673423)
chr1 (175-212)||(906002-906039)
chr1 (175-212)||(2405283-2405320)
chr1 (175-212)||(3797139-3797176)
chr1 (175-212)||(20398626-20398663)
chr1 (175-212)||(21018779-21018816)
chr1 (175-212)||(41058615-41058652)
chr1 (175-212)||(42022448-42022485)
chr1 (175-212)||(49853391-49853428)
chr1 (175-212)||(1950768-1950805)
chr1 (175-212)||(2794001-2794038)
chr1 (179-212)||(6071267-6071300)
chr1 (175-212)||(11668339-11668376)
chr1 (368-440)||(21018309-21018379)
chr1 (175-212)||(23022237-23022274)
chr1 (175-212)||(28110830-28110867)
chr1 (179-212)||(31204615-31204648)
chr1 (175-212)||(34732673-34732710)
chr1 (179-212)||(37184177-37184210)
chr1 (179-212)||(45941193-45941226)
chr1 (179-212)||(45961058-45961091)
chr1 (175-212)||(49498811-49498848)
[»] chr2 (52 HSPs)
chr2 (368-463)||(13971735-13971826)
chr2 (368-461)||(43723892-43723979)
chr2 (368-461)||(6826963-6827050)
chr2 (368-440)||(5666709-5666779)
chr2 (368-439)||(43207732-43207801)
chr2 (358-461)||(31585766-31585862)
chr2 (368-461)||(5105900-5105987)
chr2 (315-440)||(26366054-26366176)
chr2 (368-461)||(40781664-40781751)
chr2 (368-461)||(42368535-42368622)
chr2 (368-461)||(25138763-25138862)
chr2 (175-212)||(1386736-1386773)
chr2 (175-212)||(5105480-5105517)
chr2 (175-212)||(5666272-5666309)
chr2 (175-212)||(6826526-6826563)
chr2 (175-212)||(8888389-8888426)
chr2 (175-212)||(9185739-9185776)
chr2 (175-212)||(11348210-11348247)
chr2 (175-212)||(12219549-12219586)
chr2 (175-212)||(16791073-16791110)
chr2 (175-212)||(22630595-22630632)
chr2 (175-212)||(25960003-25960040)
chr2 (175-212)||(26365687-26365724)
chr2 (175-212)||(30275083-30275120)
chr2 (175-212)||(37279991-37280028)
chr2 (175-212)||(40259453-40259490)
chr2 (175-212)||(40781226-40781263)
chr2 (175-212)||(42369025-42369062)
chr2 (175-212)||(43208204-43208241)
chr2 (176-212)||(17876325-17876361)
chr2 (312-397)||(25820748-25820834)
chr2 (177-212)||(9188967-9189002)
chr2 (177-212)||(17876862-17876897)
chr2 (175-212)||(3875040-3875077)
chr2 (175-212)||(10600700-10600737)
chr2 (368-428)||(15470650-15470708)
chr2 (175-212)||(16178881-16178918)
chr2 (175-212)||(22020821-22020858)
chr2 (175-212)||(24234849-24234886)
chr2 (175-212)||(24238121-24238158)
chr2 (175-204)||(25139254-25139283)
chr2 (175-212)||(25821160-25821197)
chr2 (175-212)||(25873929-25873966)
chr2 (175-204)||(27266542-27266571)
chr2 (175-212)||(30926301-30926338)
chr2 (175-212)||(31586255-31586292)
chr2 (179-212)||(33310424-33310457)
chr2 (175-212)||(36808756-36808793)
chr2 (175-212)||(37937533-37937570)
chr2 (179-212)||(38015276-38015309)
chr2 (175-212)||(43723455-43723492)
chr2 (179-212)||(45453632-45453665)
[»] scaffold0080 (1 HSPs)
scaffold0080 (369-461)||(27320-27408)
[»] scaffold0005 (2 HSPs)
scaffold0005 (358-461)||(293207-293306)
scaffold0005 (175-212)||(292795-292832)
[»] scaffold0520 (4 HSPs)
scaffold0520 (368-461)||(8044-8131)
scaffold0520 (368-461)||(1374-1461)
scaffold0520 (175-207)||(4298-4330)
scaffold0520 (175-207)||(8537-8569)
[»] scaffold0007 (1 HSPs)
scaffold0007 (368-440)||(248728-248800)
[»] chr6 (43 HSPs)
chr6 (368-440)||(17106471-17106541)
chr6 (368-461)||(10290184-10290273)
chr6 (368-461)||(11188033-11188120)
chr6 (368-437)||(23847983-23848050)
chr6 (368-461)||(11729165-11729252)
chr6 (368-461)||(23842624-23842711)
chr6 (368-435)||(20185956-20186021)
chr6 (368-435)||(22149970-22150035)
chr6 (368-461)||(30655659-30655746)
chr6 (175-212)||(1126049-1126086)
chr6 (175-212)||(5259710-5259747)
chr6 (175-212)||(5738398-5738435)
chr6 (175-212)||(9953737-9953774)
chr6 (175-212)||(11126009-11126046)
chr6 (175-212)||(11188229-11188266)
chr6 (175-212)||(11402030-11402067)
chr6 (175-212)||(13946792-13946829)
chr6 (175-212)||(18856338-18856375)
chr6 (175-212)||(20185518-20185555)
chr6 (175-212)||(22150436-22150473)
chr6 (175-212)||(23388410-23388447)
chr6 (175-212)||(24399953-24399990)
chr6 (175-212)||(26898182-26898219)
chr6 (175-212)||(28665577-28665614)
chr6 (175-212)||(30655217-30655254)
chr6 (175-207)||(2379003-2379035)
chr6 (176-212)||(24410074-24410110)
chr6 (175-207)||(28230368-28230400)
chr6 (177-212)||(3597095-3597130)
chr6 (177-212)||(9839708-9839743)
chr6 (175-206)||(19475776-19475807)
chr6 (177-212)||(28108102-28108137)
chr6 (312-392)||(24371355-24371435)
chr6 (175-212)||(2846075-2846112)
chr6 (175-212)||(4512246-4512283)
chr6 (175-212)||(6513025-6513062)
chr6 (175-212)||(26942748-26942785)
chr6 (179-212)||(31072082-31072115)
chr6 (175-203)||(10289746-10289774)
chr6 (358-390)||(14281424-14281456)
chr6 (177-217)||(14281829-14281869)
chr6 (358-390)||(28107659-28107691)
chr6 (358-390)||(28111711-28111743)
[»] scaffold1809 (1 HSPs)
scaffold1809 (368-461)||(275-362)
[»] scaffold0757 (2 HSPs)
scaffold0757 (368-439)||(5562-5631)
scaffold0757 (175-216)||(5124-5165)
[»] scaffold0066 (1 HSPs)
scaffold0066 (175-216)||(57899-57940)
[»] scaffold0427 (1 HSPs)
scaffold0427 (175-212)||(4102-4139)
[»] scaffold0321 (1 HSPs)
scaffold0321 (175-212)||(3325-3362)
[»] scaffold0250 (1 HSPs)
scaffold0250 (175-212)||(19167-19204)
[»] scaffold0084 (2 HSPs)
scaffold0084 (175-212)||(19067-19104)
scaffold0084 (175-212)||(29137-29174)
[»] scaffold0065 (1 HSPs)
scaffold0065 (175-212)||(58996-59033)
[»] scaffold0048 (1 HSPs)
scaffold0048 (175-212)||(24593-24630)
[»] scaffold0035 (2 HSPs)
scaffold0035 (175-212)||(62289-62326)
scaffold0035 (175-212)||(63640-63677)
[»] scaffold0038 (1 HSPs)
scaffold0038 (175-207)||(30866-30898)
[»] scaffold0056 (1 HSPs)
scaffold0056 (177-212)||(67838-67873)
[»] scaffold0015 (1 HSPs)
scaffold0015 (375-440)||(198362-198424)
[»] scaffold1785 (1 HSPs)
scaffold1785 (175-212)||(1030-1067)
[»] scaffold0218 (1 HSPs)
scaffold0218 (179-212)||(10185-10218)
[»] scaffold0191 (1 HSPs)
scaffold0191 (175-212)||(1518-1555)
[»] scaffold0045 (1 HSPs)
scaffold0045 (179-212)||(89545-89578)
[»] scaffold0002 (1 HSPs)
scaffold0002 (175-212)||(118759-118796)


Alignment Details
Target: chr3 (Bit Score: 122; Significance: 2e-62; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 14 - 147
Target Start/End: Original strand, 31857518 - 31857651
Alignment:
Q  14 gcacagagagccaaagcatatcaaattcaagaacttatcatgactaaaaccttgtaatttcttctattaatattgcttgatccttttactatgagttgtt 113  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31857518 gcacagagagccaaagcatatcaaattgaagaacttatcatgattaaaaccttgtaatttcttctattaatattgcttgatccttttactatgagttgtt 31857617  T
Q  114 aagtttccagagattaggtctgagatcctaattg 147  Q
    |||||||||||| |||||||||||||||||||||    
T  31857618 aagtttccagagtttaggtctgagatcctaattg 31857651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 309 - 461
Target Start/End: Original strand, 35412727 - 35412878
Alignment:
Q  309 gactcgaaagacctagtctcatctctccatatacattttccaaaaactat----attttttgtttatttaattttatgcaatcaaatcaaatctacaaac 404  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    ||||| | ||||||||||||||||||||||||||||||||||||||    
T  35412727 gactcgaaagacctagtctcatctctccatatatattttccaaaa-ctatccttattttctatttatttaattttatgcaatcaaatcaaatctacaaac 35412825  T
Q  405 aaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    ||||||||||| ||| | |||||| ||||||||||    ||||||||||||||||||    
T  35412826 aaaataatttacacatcctaaatatttactttatt----gctaaattgagattaaca 35412878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 309 - 459
Target Start/End: Original strand, 54461232 - 54461381
Alignment:
Q  309 gactcgaaagacctagtctcatctctccatatacattttccaaaaa---ctatattttttgtttatttaattttatgcaatcaaatcaaatctacaaaca 405  Q
    ||||||||||||||||||||||||||||||||| | |||||||||    || |||||| |||||||||||||||||||||||||||||||||||||||||    
T  54461232 gactcgaaagacctagtctcatctctccatatatagtttccaaaactatctttattttctgtttatttaattttatgcaatcaaatcaaatctacaaaca 54461331  T
Q  406 aaataatttatacaacttaaatacttactttattgagagctaaattgagattaa 459  Q
    ||||||||| |||| | |||||| ||||||||||    ||||||||||||||||    
T  54461332 aaataatttttacatcctaaatatttactttatt----gctaaattgagattaa 54461381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 10106571 - 10106450
Alignment:
Q  315 aaagacctagtctcatctctccatatacattttccaaaaa---ctatattttttgtttatttaattttatgcaatcaaatcaaatctacaaacaaaataa 411  Q
    ||||||||||||||||||||| ||||| |||||||||||    || |||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  10106571 aaagacctagtctcatctctc-atatatattttccaaaactatctttattttctgtttatttaattttatgcaatcaaatcaaatctataaacaaaataa 10106473  T
Q  412 tttatacaacttaaatacttact 434  Q
    |||||||| | |||||| |||||    
T  10106472 tttatacatcctaaatatttact 10106450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 358 - 461
Target Start/End: Complemental strand, 8461414 - 8461315
Alignment:
Q  358 tattttttgtttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagatt 457  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||| ||||||||||     |||||||||||||    
T  8461414 tattttctgtttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttataaatcctaaatatttactttatt----tctaaattgagatt 8461319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 368 - 461
Target Start/End: Complemental strand, 20728546 - 20728457
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| | ||||||||    ||||||||||||||||||    
T  20728546 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacatcctaaatattcactttatt----gctaaattgagattaaca 20728457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 52309533 - 52309461
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattg 440  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||| | |||||| |||||||||||    
T  52309533 ttatttaaatttatgcaatcaaattaaatctacaaacaaaataatttatacatcctaaatatttactttattg 52309461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 309 - 385
Target Start/End: Complemental strand, 18641749 - 18641670
Alignment:
Q  309 gactcgaaagacctagtctcatctctccatatacattttccaaa---aactatattttttgtttatttaattttatgcaa 385  Q
    ||||||||||||||||||||||||||||||||| ||||||||||   | || |||||| |||||||||||||||||||||    
T  18641749 gactcgaaagacctagtctcatctctccatatatattttccaaaactatctttattttctgtttatttaattttatgcaa 18641670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 309 - 385
Target Start/End: Complemental strand, 18644745 - 18644666
Alignment:
Q  309 gactcgaaagacctagtctcatctctccatatacattttccaaa---aactatattttttgtttatttaattttatgcaa 385  Q
    ||||||||||||||||||||||||||||||||| ||||||||||   | || |||||| |||||||||||||||||||||    
T  18644745 gactcgaaagacctagtctcatctctccatatatattttccaaaactatctttattttctgtttatttaattttatgcaa 18644666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 370 - 461
Target Start/End: Original strand, 10902237 - 10902322
Alignment:
Q  370 atttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||| | | |||||| ||||||||||    ||||||||||||||||||    
T  10902237 atttaattttatgcaatcaaatcaaatct--aaacaaaataatttatatatcctaaatatttactttatt----gctaaattgagattaaca 10902322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 16244168 - 16244255
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||| ||||||||||||||  ||||||||||||||||||| | |||||| ||||||||||     |||||||||||||||||    
T  16244168 ttatttaattttatgctatcaaatcaaatct--aaacaaaataatttatacatcctaaatatttactttatt----actaaattgagattaaca 16244255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 368 - 461
Target Start/End: Complemental strand, 49742818 - 49742731
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||| | |||||| ||||||||||     |||||||||||||||||    
T  49742818 ttatttaattttatgcaatcaaataaaatct--aaacaaaataatttatacatcctaaatatttactttatt----tctaaattgagattaaca 49742731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 368 - 439
Target Start/End: Original strand, 25584972 - 25585041
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttatt 439  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||| | |||||| ||||||||||    
T  25584972 ttatttaattttatgcaatcaaataaaatct--aaacaaaataatttatacatcctaaatatttactttatt 25585041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 370 - 440
Target Start/End: Original strand, 10881777 - 10881845
Alignment:
Q  370 atttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattg 440  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||| | | |||||| |||||||||||    
T  10881777 atttaattttatgcaatcaaatcaaatct--aaacaaaataatttatatatcctaaatatttactttattg 10881845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 2775780 - 2775867
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||  |||||||  |||||||||||||||||| | |||||| ||||||||||     |||||||||||||||||    
T  2775780 ttatttaattttatgcaatcaaacaaaatcta--aacaaaataatttatacatcctaaatatttactttatt----tctaaattgagattaaca 2775867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 2779022 - 2779109
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||  |||||||  |||||||||||||||||| | |||||| ||||||||||     |||||||||||||||||    
T  2779022 ttatttaattttatgcaatcaaacaaaatcta--aacaaaataatttatacatcctaaatatttactttatt----tctaaattgagattaaca 2779109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 43927130 - 43927222
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctac---aaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||||||||| |    ||||||||||||||||||| | |||||| ||||||||||     |||||||||||||||||    
T  43927130 ttatttaattttatgcaatcaaatcaaatcaaatctaaacaaaataatttatacatcctaaatatttactttatt----tctaaattgagattaaca 43927222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 45896676 - 45896763
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||  |||||||  |||||||||||||||||| | |||||| ||||||||||     |||||||||||||||||    
T  45896676 ttatttaattttatgcaatcaaacaaaatcta--aacaaaataatttatacatcctaaatatttactttatt----tctaaattgagattaaca 45896763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 440
Target Start/End: Original strand, 41977296 - 41977366
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattg 440  Q
    |||||||||||||||||||||||||||||||  ||| ||||||||||||| | | |||||| ||| |||||||    
T  41977296 ttatttaattttatgcaatcaaatcaaatct--aaataaaataatttatatatcctaaatatttattttattg 41977366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 439
Target Start/End: Original strand, 3840812 - 3840881
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttatt 439  Q
    ||||||||||||||| |||||||| ||||||  ||||||||||||||||| | | |||||| ||||||||||    
T  3840812 ttatttaattttatgtaatcaaataaaatct--aaacaaaataatttatagatcctaaatatttactttatt 3840881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 31549467 - 31549566
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctac----------aaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagatt 457  Q
    ||||||| |||||||||||||||||||||||||          ||||||||||||||||||| | |||||| ||||||||||    ||||||||||||||    
T  31549467 ttatttacttttatgcaatcaaatcaaatctactgcctagggtaaacaaaataatttatacatcctaaatatttactttatt----gctaaattgagatt 31549562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 15195639 - 15195597
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtttttat 217  Q
    ||||||||||||||||||||||||||||||||| |||| ||||    
T  15195639 tgtgaatgacaatctagtttttattcaattcaattgttcttat 15195597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 30690592 - 30690630
Alignment:
Q  174 ctgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  30690592 ctgtgaatgacaatctagtttttattcaattcaattgtt 30690630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 538683 - 538720
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  538683 tgtgaatgacaatctagtttttattcaattcaattgtt 538720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 2775338 - 2775375
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  2775338 tgtgaatgacaatctagtttttattcaattcaattgtt 2775375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 2778581 - 2778618
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  2778581 tgtgaatgacaatctagtttttattcaattcaattgtt 2778618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 2873421 - 2873458
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  2873421 tgtgaatgacaatctagtttttattcaattcaattgtt 2873458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 3840373 - 3840410
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  3840373 tgtgaatgacaatctagtttttattcaattcaattgtt 3840410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 7486427 - 7486464
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  7486427 tgtgaatgacaatctagtttttattcaattcaattgtt 7486464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 9392591 - 9392628
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  9392591 tgtgaatgacaatctagtttttattcaattcaattgtt 9392628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 10881337 - 10881374
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  10881337 tgtgaatgacaatctagtttttattcaattcaattgtt 10881374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 11190383 - 11190420
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  11190383 tgtgaatgacaatctagtttttattcaattcaattgtt 11190420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 16243730 - 16243767
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  16243730 tgtgaatgacaatctagtttttattcaattcaattgtt 16243767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 17040359 - 17040322
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  17040359 tgtgaatgacaatctagtttttattcaattcaattgtt 17040322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 20728984 - 20728947
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  20728984 tgtgaatgacaatctagtttttattcaattcaattgtt 20728947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 22417171 - 22417134
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  22417171 tgtgaatgacaatctagtttttattcaattcaattgtt 22417134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 24125356 - 24125393
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  24125356 tgtgaatgacaatctagtttttattcaattcaattgtt 24125393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 24128633 - 24128670
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  24128633 tgtgaatgacaatctagtttttattcaattcaattgtt 24128670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 25443197 - 25443160
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  25443197 tgtgaatgacaatctagtttttattcaattcaattgtt 25443160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 25584544 - 25584581
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  25584544 tgtgaatgacaatctagtttttattcaattcaattgtt 25584581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 30220346 - 30220309
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  30220346 tgtgaatgacaatctagtttttattcaattcaattgtt 30220309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 32287661 - 32287624
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  32287661 tgtgaatgacaatctagtttttattcaattcaattgtt 32287624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 34984190 - 34984153
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  34984190 tgtgaatgacaatctagtttttattcaattcaattgtt 34984153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 35412372 - 35412409
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  35412372 tgtgaatgacaatctagtttttattcaattcaattgtt 35412409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 43809436 - 43809473
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  43809436 tgtgaatgacaatctagtttttattcaattcaattgtt 43809473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 45896237 - 45896274
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  45896237 tgtgaatgacaatctagtttttattcaattcaattgtt 45896274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 46884809 - 46884846
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  46884809 tgtgaatgacaatctagtttttattcaattcaattgtt 46884846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 49743257 - 49743220
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  49743257 tgtgaatgacaatctagtttttattcaattcaattgtt 49743220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 52199770 - 52199807
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  52199770 tgtgaatgacaatctagtttttattcaattcaattgtt 52199807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 52309895 - 52309858
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  52309895 tgtgaatgacaatctagtttttattcaattcaattgtt 52309858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 52988262 - 52988299
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  52988262 tgtgaatgacaatctagtttttattcaattcaattgtt 52988299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 54719828 - 54719865
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  54719828 tgtgaatgacaatctagtttttattcaattcaattgtt 54719865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 54723598 - 54723635
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  54723598 tgtgaatgacaatctagtttttattcaattcaattgtt 54723635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 55035197 - 55035160
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  55035197 tgtgaatgacaatctagtttttattcaattcaattgtt 55035160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 461
Target Start/End: Complemental strand, 28007948 - 28007891
Alignment:
Q  400 caaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||| | |||||| ||||||||||    ||||||||||||||||||    
T  28007948 caaacaaaataatttatacatcctaaatatttactttatt----gctaaattgagattaaca 28007891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 207
Target Start/End: Original strand, 41976872 - 41976904
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaa 207  Q
    |||||||||||||||||||||||||||||||||    
T  41976872 tgtgaatgacaatctagtttttattcaattcaa 41976904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 3293298 - 3293261
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  3293298 tgtgaatgacaatctagtttttattcaactcaaatgtt 3293261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 6435115 - 6435078
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  6435115 tgtgaatgacaatttagtttttattcaattcaattgtt 6435078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 10106936 - 10106899
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  10106936 tgtgaatgataatctagtttttattcaattcaattgtt 10106899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 10884715 - 10884752
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  10884715 tgtgaatgataatctagtttttattcaattcaattgtt 10884752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 11784626 - 11784659
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  11784626 aatgacaatctagtttttattcaattcaattgtt 11784659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 12561571 - 12561534
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  12561571 tgtgaatgacaatctagtttttattgaattcaattgtt 12561534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 16185025 - 16184988
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    |||||||||||||||| |||||||||||||||| ||||    
T  16185025 tgtgaatgacaatctaatttttattcaattcaattgtt 16184988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 17141265 - 17141302
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  17141265 tgtgaatgataatctagtttttattcaattcaattgtt 17141302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 19301842 - 19301805
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  19301842 tgtgaatgacaatctagtttttatttaattcaattgtt 19301805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 19305026 - 19304989
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  19305026 tgtgaatgacaatctagtttttatttaattcaattgtt 19304989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 22783449 - 22783486
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  22783449 tgtggatgacaatctagtttttattcaattcaattgtt 22783486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 22787813 - 22787850
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  22787813 tgtggatgacaatctagtttttattcaattcaattgtt 22787850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 27091751 - 27091788
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  27091751 tgtgaatgacaatctagttttaattcaattcaattgtt 27091788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 204
Target Start/End: Complemental strand, 28008407 - 28008378
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaatt 204  Q
    ||||||||||||||||||||||||||||||    
T  28008407 tgtgaatgacaatctagtttttattcaatt 28008378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 28265737 - 28265774
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  28265737 tgtgaatgacaatttagtttttattcaattcaattgtt 28265774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 29344212 - 29344175
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  29344212 tgtgaatgacaatccagtttttattcaattcaattgtt 29344175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 31857673 - 31857710
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  31857673 tgtgaatgacaatatagtttttattcaattcaattgtt 31857710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 32367466 - 32367429
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  32367466 tgtgaatgataatctagtttttattcaattcaattgtt 32367429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 35751315 - 35751348
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  35751315 aatgacaatctagtttttattcaattcaattgtt 35751348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 47051356 - 47051389
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  47051356 aatgacaatctagtttttattcaattcaattgtt 47051389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 47054786 - 47054819
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  47054786 aatgacaatctagtttttattcaattcaattgtt 47054819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 48064372 - 48064335
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  48064372 tgtgaatgacaatatagtttttattcaattcaattgtt 48064335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 50461882 - 50461849
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  50461882 aatgacaatctagtttttattcaattcaattgtt 50461849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 341
Target Start/End: Original strand, 52200133 - 52200162
Alignment:
Q  312 tcgaaagacctagtctcatctctccatata 341  Q
    ||||||||||||||||||||||||||||||    
T  52200133 tcgaaagacctagtctcatctctccatata 52200162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 53815685 - 53815722
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  53815685 tgtgaatgacaatttagtttttattcaattcaattgtt 53815722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 175 - 207
Target Start/End: Complemental strand, 8461824 - 8461792
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaa 207  Q
    ||||||||||||| |||||||||||||||||||    
T  8461824 tgtgaatgacaatttagtttttattcaattcaa 8461792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 358 - 390
Target Start/End: Complemental strand, 32287242 - 32287210
Alignment:
Q  358 tattttttgtttatttaattttatgcaatcaaa 390  Q
    |||||| ||||||||||||||||||||||||||    
T  32287242 tattttctgtttatttaattttatgcaatcaaa 32287210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 5e-51; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 13450307 - 13450181
Alignment:
Q  14 gcacagagagccaaagcatatcaaattcaagaacttatcatgactaaaaccttgtaatttcttctattaatattgcttgatccttttactatgagttgtt 113  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13450307 gcacagagagccaaagcatatcaaattgaagaacttatcatgattaaaaccttgtaatttcttctattaatattgtttgatccttttactatgagttgtt 13450208  T
Q  114 aag-tttccagagattaggtctgagat 139  Q
    ||| |||| ||||||||||||||||||    
T  13450207 aagttttctagagattaggtctgagat 13450181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 35961295 - 35961384
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||    ||||||||||||||||||    
T  35961295 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacatcctaaatatttactttatt----gctaaattgagattaaca 35961384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 358 - 461
Target Start/End: Complemental strand, 13449719 - 13449619
Alignment:
Q  358 tattttttgtttatttaattttatgcaatcaaatc-aaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagat 456  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| | |||||| |||||||| |    |||||||||||||    
T  13449719 tattttctgtttatttaattttatgcaatcaaatcaaaatctacaaacaaaattatttatacatcctaaatatttactttact----gctaaattgagat 13449624  T
Q  457 taaca 461  Q
    |||||    
T  13449623 taaca 13449619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 376 - 471
Target Start/End: Original strand, 10345379 - 10345470
Alignment:
Q  376 ttttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaacaaaatcgtcgt 471  Q
    |||||||||| ||||||||||||||||||||||||||||||||| | |||||| ||||||||||    |||||||||||||||||| |||| ||||    
T  10345379 ttttatgcaaacaaatcaaatctacaaacaaaataatttatacatcctaaatatttactttatt----gctaaattgagattaacacaatcctcgt 10345470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 26557696 - 26557783
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | |||||| ||||||||||    ||||||||||||||||||    
T  26557696 ttatttaattttatgcaatcaaatcaaatct--aaacaaaataatttatacatcctaaatatttactttatt----gctaaattgagattaaca 26557783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 368 - 461
Target Start/End: Complemental strand, 9864662 - 9864573
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||| | |||||| ||||||||||     |||||||||||||||||    
T  9864662 ttatttaattttatgcaatcaaatcaaatctacaaaaaaaataatttacacatcctaaatatttactttatt----tctaaattgagattaaca 9864573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 4542994 - 4543081
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||| | |||||| ||||||||||    ||||||||||||||||||    
T  4542994 ttatttaattttatgcaatcaaataaaatct--aaacaaaataatttatacatcctaaatatttactttatt----gctaaattgagattaaca 4543081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 368 - 461
Target Start/End: Complemental strand, 4595926 - 4595839
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||| |||||||  |||||||||||||||||| | |||||| ||||||||||    ||||||||||||||||||    
T  4595926 ttatttaattttatgcaatcaaataaaatcta--aacaaaataatttatacatcctaaatatttactttatt----gctaaattgagattaaca 4595839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 368 - 440
Target Start/End: Original strand, 4547066 - 4547136
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattg 440  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||| | |||||| |||||||||||    
T  4547066 ttatttaattttatgcaatcaaataaaatct--aaacaaaataatttatacatcctaaatatttactttattg 4547136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 368 - 440
Target Start/End: Original strand, 4695678 - 4695748
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattg 440  Q
    |||||||||| ||||||||||||||||||||  ||||||||||||||||||| | |||||| |||||||||||    
T  4695678 ttatttaattgtatgcaatcaaatcaaatct--aaacaaaataatttatacatcctaaatatttactttattg 4695748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 372 - 463
Target Start/End: Complemental strand, 22611646 - 22611561
Alignment:
Q  372 ttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaacaaa 463  Q
    |||||||||||| |||||||||||||||  |||||||||||||||||| | |||||| ||||| ||||    ||||||||||||||||||||    
T  22611646 ttaattttatgccatcaaatcaaatcta--aacaaaataatttatacatcctaaatatttactatatt----gctaaattgagattaacaaa 22611561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 8277184 - 8277271
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||| ||||||||| |||||||  |||||||||||||||||| | |||||| ||||||||||     |||||||||||||||||    
T  8277184 ttatttaattttattcaatcaaataaaatcta--aacaaaataatttatacatcctaaatatttactttatt----tctaaattgagattaaca 8277271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 439
Target Start/End: Complemental strand, 11919782 - 11919712
Alignment:
Q  368 ttatttaattttatgcaatcaaatc-aaatctacaaacaaaataatttatacaacttaaatacttactttatt 439  Q
    ||||||||||||||||||||||||| ||||||  ||||||||||||||||||| | |||||| ||||||||||    
T  11919782 ttatttaattttatgcaatcaaatcaaaatct--aaacaaaataatttatacatcctaaatatttactttatt 11919712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 10468903 - 10468944
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgttttta 216  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  10468903 tgtgaatgacaatctagtttttattcaattcaattgttttta 10468944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 408
Target Start/End: Original strand, 17731011 - 17731051
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaa 408  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  17731011 ttatttaattttatgcaatcaaatcaaatctacaaaaaaaa 17731051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 4596364 - 4596327
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  4596364 tgtgaatgacaatctagtttttattcaattcaattgtt 4596327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 4695283 - 4695320
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  4695283 tgtgaatgacaatctagtttttattcaattcaattgtt 4695320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 5242508 - 5242471
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  5242508 tgtgaatgacaatctagtttttattcaattcaattgtt 5242471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 9133115 - 9133078
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  9133115 tgtgaatgacaatctagtttttattcaattcaattgtt 9133078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 17730573 - 17730610
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  17730573 tgtgaatgacaatctagtttttattcaattcaattgtt 17730610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 23225261 - 23225224
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  23225261 tgtgaatgacaatctagtttttattcaattcaattgtt 23225224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 26136483 - 26136446
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  26136483 tgtgaatgacaatctagtttttattcaattcaattgtt 26136446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 26144863 - 26144826
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  26144863 tgtgaatgacaatctagtttttattcaattcaattgtt 26144826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 26557259 - 26557296
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  26557259 tgtgaatgacaatctagtttttattcaattcaattgtt 26557296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 30058552 - 30058436
Alignment:
Q  23 gccaaagcatatcaaattcaagaacttatcatgactaaaaccttgtaatttcttctattaatattgcttgatccttttactatgagttgtta-agtttcc 121  Q
    |||||||||||||||||| ||||| || | || |  ||||||||||||||||||  |||||||||| || || ||||||  ||||||||||| | |||||    
T  30058552 gccaaagcatatcaaattgaagaaattcttattatcaaaaccttgtaatttctttaattaatattgtttaat-cttttatcatgagttgttagattttcc 30058454  T
Q  122 agagattaggtctgagat 139  Q
       |||||||||||||||    
T  30058453 tttgattaggtctgagat 30058436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 37415780 - 37415739
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgttttta 216  Q
    ||||||||||||| ||||||||||||||||||| ||||||||    
T  37415780 tgtgaatgacaatttagtttttattcaattcaattgttttta 37415739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 37423312 - 37423271
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgttttta 216  Q
    ||||||||||||| ||||||||||||||||||| ||||||||    
T  37423312 tgtgaatgacaatttagtttttattcaattcaattgttttta 37423271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 14683800 - 14683762
Alignment:
Q  174 ctgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  14683800 ctgtgaatgacaatttagtttttattcaattcaattgtt 14683762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 3068332 - 3068295
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  3068332 tgtgaataacaatctagtttttattcaattcaattgtt 3068295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 6603221 - 6603254
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  6603221 aatgacaatctagtttttattcaattcaattgtt 6603254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 7227286 - 7227323
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  7227286 tgtgaatgacaatttagtttttattcaattcaattgtt 7227323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 8276748 - 8276781
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  8276748 aatgacaatctagtttttattcaattcaattgtt 8276781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 9273475 - 9273438
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  9273475 tgtgaatgactatctagtttttattcaattcaattgtt 9273438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 13450127 - 13450094
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  13450127 aatgacaatctagtttttattcaattcaattgtt 13450094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 13809868 - 13809831
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  13809868 tgtgaatgacaatttagtttttattcaattcaattgtt 13809831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 13842403 - 13842436
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  13842403 aatgacaatctagtttttattcaattcaattgtt 13842436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 16165511 - 16165544
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  16165511 aatgacaatctagtttttattcaattcaattgtt 16165544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 22611962 - 22611925
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  22611962 tgtgaatgataatctagtttttattcaattcaattgtt 22611925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 37166502 - 37166465
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  37166502 tgtgaacgacaatctagtttttattcaattcaattgtt 37166465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 45287424 - 45287387
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  45287424 tgtgaatgacaatttagtttttattcaattcaattgtt 45287387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 45290769 - 45290732
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  45290769 tgtgaatgacaatttagtttttattcaattcaattgtt 45290732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 179 - 207
Target Start/End: Original strand, 9080940 - 9080968
Alignment:
Q  179 aatgacaatctagtttttattcaattcaa 207  Q
    |||||||||||||||||||||||||||||    
T  9080940 aatgacaatctagtttttattcaattcaa 9080968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 397
Target Start/End: Original strand, 48645596 - 48645682
Alignment:
Q  312 tcgaaagacctagtctcatctctccatatacattttccaaa---aactatattttttgtttatttaatttta-tgcaatcaaatcaaatc 397  Q
    |||||||| ||||||||||||||||||||  ||||||||||   | || |||||| || ||||||| ||||| |||||||||||||||||    
T  48645596 tcgaaagatctagtctcatctctccatat--attttccaaacatatctttattttctg-ttatttacttttattgcaatcaaatcaaatc 48645682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 3e-43; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 309 - 461
Target Start/End: Complemental strand, 22936927 - 22936775
Alignment:
Q  309 gactcgaaagacctagtctcatctctccatatacattttccaaaaa---ctatattttt-tgtttatttaattttatgcaatcaaatcaaatctacaaac 404  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    || ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22936927 gactcgaaagacctagtctcatctctccatatatattttccaaaactatctttatttttctgtttatttaattttatgcaatcaaatcaaatctacaaac 22936828  T
Q  405 aaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    ||||||||||| ||| | |||||| ||||||||||    ||||||||||||||||||    
T  22936827 aaaataatttacacatcctaaatatttactttatt----gctaaattgagattaaca 22936775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 30066519 - 30066608
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||    ||||||||||||||||||    
T  30066519 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacatcctaaatatttactttatt----gctaaattgagattaaca 30066608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 7271226 - 7271315
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||| ||| ||||||    ||||||||||||||||||    
T  7271226 ttatttaattttatgcaatcaaattaaatctacaaacaaaataatttatacatcctaaatatttattttatt----gctaaattgagattaaca 7271315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 368 - 459
Target Start/End: Original strand, 39192540 - 39192625
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaa 459  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | |||||| ||| ||||||    ||||||||||||||||    
T  39192540 ttatttaattttatgcaatcaaatcaaatct--aaacaaaataatttatacatcctaaatatttaatttatt----gctaaattgagattaa 39192625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 4099448 - 4099378
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattg 440  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| | | |||||| |||||||||||    
T  4099448 ttatttaattttatgcaatcaaatcaaatct--aaacaaaataatttatatatcctaaatatttactttattg 4099378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 28787249 - 28787172
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatc-----tacaaacaaaataatttatacaacttaaatacttactttattg 440  Q
    ||||||||||||||||||||||||||||||     |||||||||||||||||||||| | |||||| |||||||||||    
T  28787249 ttatttaattttatgcaatcaaatcaaatcaaatctacaaacaaaataatttatacatcctaaatatttactttattg 28787172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 33552331 - 33552418
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||| | |||||| ||||| |||||     ||||||||||||||||    
T  33552331 ttatttaattttatgcaatcaaatcaaatcta--aacaaaataatttatacatcctaaatatttactctattgt----taaattgagattaaca 33552418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 34831974 - 34832061
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||| ||||||||||| |||||||  |||||||||||||||||| | |||||| ||||||||||     |||||||||||||||||    
T  34831974 ttatttaattttttgcaatcaaataaaatcta--aacaaaataatttatacatcctaaatatttactttatt----tctaaattgagattaaca 34832061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 461
Target Start/End: Complemental strand, 41876676 - 41876589
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||  |||||||  |||||||||||||||||| | |||||| ||||||||||     |||||||||||||||||    
T  41876676 ttatttaattttatgcaatcaaacaaaatcta--aacaaaataatttatacatcctaaatatttactttatt----tctaaattgagattaaca 41876589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 309 - 353
Target Start/End: Complemental strand, 14375785 - 14375741
Alignment:
Q  309 gactcgaaagacctagtctcatctctccatatacattttccaaaa 353  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  14375785 gactcgaaagacctagtctcatctctccatatatattttccaaaa 14375741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 18952465 - 18952506
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgttttta 216  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  18952465 tgtgaatgacaatctagtttttattcaattcaattgttttta 18952506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 41877115 - 41877074
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgttttta 216  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  41877115 tgtgaatgacaatctagtttttattcaattcaattgttttta 41877074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 461
Target Start/End: Original strand, 43491940 - 43492044
Alignment:
Q  358 tattttttgtttatttaattttatgcaatcaaatcaaat--cta---caaacaaaataatttatacaacttaaatacttactttattgagagctaaattg 452  Q
    |||||| | |||||||||||||||||||||||| | | |  |||   |||||||||||||||||||| | |||||| ||||||||||    |||||||||    
T  43491940 tattttctatttatttaattttatgcaatcaaaactactgtctagggcaaacaaaataatttatacatcctaaatatttactttatt----gctaaattg 43492035  T
Q  453 agattaaca 461  Q
    |||||||||    
T  43492036 agattaaca 43492044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 2837075 - 2837112
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  2837075 tgtgaatgacaatctagtttttattcaattcaattgtt 2837112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 11959520 - 11959483
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  11959520 tgtgaatgacaatctagtttttattcaattcaattgtt 11959483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 12087730 - 12087767
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  12087730 tgtgaatgacaatctagtttttattcaattcaattgtt 12087767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 17664324 - 17664361
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  17664324 tgtgaatgacaatctagtttttattcaattcaattgtt 17664361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 17748212 - 17748249
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  17748212 tgtgaatgacaatctagtttttattcaattcaattgtt 17748249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 22937288 - 22937251
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  22937288 tgtgaatgacaatctagtttttattcaattcaattgtt 22937251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 23043936 - 23043973
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  23043936 tgtgaatgacaatctagtttttattcaattcaattgtt 23043973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 26292563 - 26292600
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  26292563 tgtgaatgacaatctagtttttattcaattcaattgtt 26292600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 26753052 - 26753015
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  26753052 tgtgaatgacaatctagtttttattcaattcaattgtt 26753015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 28441485 - 28441448
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  28441485 tgtgaatgacaatctagtttttattcaattcaattgtt 28441448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 28787673 - 28787636
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  28787673 tgtgaatgacaatctagtttttattcaattcaattgtt 28787636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 312 - 373
Target Start/End: Original strand, 31575553 - 31575614
Alignment:
Q  312 tcgaaagacctagtctcatctctccatatacattttccaa--aaactatattttttgtttattt 373  Q
    |||||||||||||||||||||||||||||   ||||||||  ||||| ||||||||||||||||    
T  31575553 tcgaaagacctagtctcatctctccatat--cttttccaaacaaactttattttttgtttattt 31575614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 31863471 - 31863508
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  31863471 tgtgaatgacaatctagtttttattcaattcaattgtt 31863508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 34133333 - 34133296
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  34133333 tgtgaatgacaatctagtttttattcaattcaattgtt 34133296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 34143564 - 34143527
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  34143564 tgtgaatgacaatctagtttttattcaattcaattgtt 34143527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 34831535 - 34831572
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  34831535 tgtgaatgacaatctagtttttattcaattcaattgtt 34831572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 40583021 - 40583058
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  40583021 tgtgaatgacaatctagtttttattcaattcaattgtt 40583058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 42062693 - 42062730
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  42062693 tgtgaatgacaatctagtttttattcaattcaattgtt 42062730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 207
Target Start/End: Complemental strand, 4099872 - 4099840
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaa 207  Q
    |||||||||||||||||||||||||||||||||    
T  4099872 tgtgaatgacaatctagtttttattcaattcaa 4099840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 207
Target Start/End: Complemental strand, 21333032 - 21333000
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaa 207  Q
    |||||||||||||||||||||||||||||||||    
T  21333032 tgtgaatgacaatctagtttttattcaattcaa 21333000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 207
Target Start/End: Original strand, 30066114 - 30066146
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaa 207  Q
    |||||||||||||||||||||||||||||||||    
T  30066114 tgtgaatgacaatctagtttttattcaattcaa 30066146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 212
Target Start/End: Original strand, 32837794 - 32837829
Alignment:
Q  177 tgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||| ||||    
T  32837794 tgaatgacaatctagtttttattcaattcaattgtt 32837829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 14376155 - 14376121
Alignment:
Q  178 gaatgacaatctagtttttattcaattcaactgtt 212  Q
    |||||||||||||||||||||||||||||| ||||    
T  14376155 gaatgacaatctagtttttattcaattcaattgtt 14376121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 7270788 - 7270825
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  7270788 tgtgaatgacaatctagtttctattcaattcaattgtt 7270825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 7624878 - 7624911
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  7624878 aatgacaatctagtttttattcaattcaattgtt 7624911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 12058842 - 12058805
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  12058842 tgtgaatgacattctagtttttattcaattcaattgtt 12058805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 14016485 - 14016452
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  14016485 aatgacaatctagtttttattcaattcaattgtt 14016452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 26907805 - 26907768
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  26907805 tgtgaatgacaatctagttttaattcaattcaattgtt 26907768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 33551893 - 33551930
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  33551893 tgtgaatgacaatatagtttttattcaattcaattgtt 33551930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 41306877 - 41306840
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    |||||||||||||||| |||||||||||||||| ||||    
T  41306877 tgtgaatgacaatctaatttttattcaattcaattgtt 41306840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 43491527 - 43491564
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  43491527 tgtgaatgacaatatagtttttattcaattcaattgtt 43491564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 20055547 - 20055583
Alignment:
Q  176 gtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  20055547 gtgaatgacaatcaagtttttattcaattcaattgtt 20055583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 139
Target Start/End: Original strand, 31863346 - 31863421
Alignment:
Q  66 tgtaatttcttctattaatattgcttgatccttttactatgagttgttaag--tttccagagattaggtctgagat 139  Q
    |||||||||||  ||||||||||||| ||| |||||  |||||||| ||||  |||| || |||||||||||||||    
T  31863346 tgtaatttctttaattaatattgcttaatctttttatcatgagttgctaagtttttctagggattaggtctgagat 31863421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 2e-38; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 308 - 461
Target Start/End: Complemental strand, 43681861 - 43681709
Alignment:
Q  308 agactcgaaagacctagtctcatctctccatatacattttccaaaaa---ctatattttttgtttatttaattttatgcaatcaaatcaaatctacaaac 404  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||    || |||||| | ||||||||||||||||||||||||||||||||| ||||    
T  43681861 agactcgaaagacctagtctcatctctccatatatatttttcaaaactatctttattttctatttatttaattttatgcaatcaaatcaaatctaaaaac 43681762  T
Q  405 aaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    ||||||||||| ||| | |||||| ||||||||||    ||||||||||||||||||    
T  43681761 aaaataatttacacatcctaaatatttactttatt----gctaaattgagattaaca 43681709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 312 - 461
Target Start/End: Complemental strand, 18721268 - 18721121
Alignment:
Q  312 tcgaaagacctagtctcatctctccatatacattttccaaaaa---ctatattttttgtttatttaattttatgcaatcaaatcaaatctacaaacaaaa 408  Q
    |||||||||||||||||||||||  ||||| ||||||||| |    || |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18721268 tcgaaagacctagtctcatctctt-atatatattttccaacactatctttattttctgtttatttaattttatgcaatcaaatcaaatctacaaacaaaa 18721170  T
Q  409 taatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    ||||||| ||| | |||||| | || |||||    ||||||||||||||||||    
T  18721169 taatttacacatcctaaatattaaccttatt----gctaaattgagattaaca 18721121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 14421937 - 14422027
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaa-tctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||| ||||||||||     |||||||||||||||||    
T  14421937 ttatttaattttatgcaatcaaatcaaaatctacaaacaaaataatttatacatcctaaatatttactttatt----actaaattgagattaaca 14422027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 368 - 461
Target Start/End: Complemental strand, 22173854 - 22173767
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | |||||| ||||||||||     |||||||||||||||||    
T  22173854 ttatttaattttatgcaatcaaatcaaatct--aaacaaaataatttatacatcctaaatatttactttatt----tctaaattgagattaaca 22173767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 12583218 - 12583305
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| | | |||||| ||||||||||    ||||||||||||||||||    
T  12583218 ttatttaattttatgcaatcaaattaaatct--aaacaaaataatttatatatcctaaatatttactttatt----gctaaattgagattaaca 12583305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 23597405 - 23597492
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||| | |||||| ||||||||||     |||||||||||||||||    
T  23597405 ttatttaattttatgcaatcaaataaaatct--aaacaaaataatttatacatcctaaatatttactttatt----tctaaattgagattaaca 23597492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 8911416 - 8911457
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgttttta 216  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  8911416 tgtgaatgacaatctagtttttattcaattcaattgttttta 8911457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 20887742 - 20887829
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||  ||||||  ||||||||||||||||||| | |||||| || |||||||     |||||||||||||||||    
T  20887742 ttatttaattttatgcaatcaaacaaaatct--aaacaaaataatttatacatcctaaatatttcctttatt----tctaaattgagattaaca 20887829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 461
Target Start/End: Original strand, 23644001 - 23644105
Alignment:
Q  358 tattttttgtttatttaattttatgcaatcaaatcaaat--cta---caaacaaaataatttatacaacttaaatacttactttattgagagctaaattg 452  Q
    |||||| |||||||||||||||||||||||||||| | |  |||    ||||||||||||||||||| | |||||| ||||||||||     ||||||||    
T  23644001 tattttctgtttatttaattttatgcaatcaaatctactgcctagggaaaacaaaataatttatacatcctaaatatttactttatt----tctaaattg 23644096  T
Q  453 agattaaca 461  Q
    |||||||||    
T  23644097 agattaaca 23644105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 14421513 - 14421550
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  14421513 tgtgaatgacaatctagtttttattcaattcaattgtt 14421550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 16953545 - 16953582
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  16953545 tgtgaatgacaatctagtttttattcaattcaattgtt 16953582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 17930750 - 17930787
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  17930750 tgtgaatgacaatctagtttttattcaattcaattgtt 17930787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 18721632 - 18721595
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  18721632 tgtgaatgacaatctagtttttattcaattcaattgtt 18721595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 23613309 - 23613346
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  23613309 tgtgaatgacaatctagtttttattcaattcaattgtt 23613346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 23619714 - 23619677
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  23619714 tgtgaatgacaatctagtttttattcaattcaattgtt 23619677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 25230849 - 25230886
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  25230849 tgtgaatgacaatctagtttttattcaattcaattgtt 25230886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 25595008 - 25594971
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  25595008 tgtgaatgacaatctagtttttattcaattcaattgtt 25594971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 30784698 - 30784735
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  30784698 tgtgaatgacaatctagtttttattcaattcaattgtt 30784735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 31284439 - 31284476
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  31284439 tgtgaatgacaatctagtttttattcaattcaattgtt 31284476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 38248749 - 38248712
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  38248749 tgtgaatgacaatctagtttttattcaattcaattgtt 38248712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 45155620 - 45155583
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  45155620 tgtgaatgacaatctagtttttattcaattcaattgtt 45155583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 461
Target Start/End: Complemental strand, 5980184 - 5980127
Alignment:
Q  400 caaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||| | |||||| ||||||||||    ||||||||||||||||||    
T  5980184 caaacaaaataatttatacatcctaaatatttactttatt----gctaaattgagattaaca 5980127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 212
Target Start/End: Original strand, 23643590 - 23643625
Alignment:
Q  177 tgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||| ||||    
T  23643590 tgaatgacaatctagtttttattcaattcaattgtt 23643625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 206
Target Start/End: Complemental strand, 25591829 - 25591798
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattca 206  Q
    ||||||||||||||||||||||||||||||||    
T  25591829 tgtgaatgacaatctagtttttattcaattca 25591798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 397
Target Start/End: Complemental strand, 5538757 - 5538674
Alignment:
Q  315 aaagacctagtctcatctctccatatacattttccaaa---aactatattttttgtttatttaatttta-tgcaatcaaatcaaatc 397  Q
    ||||||||||||||||||||||||||  ||||||||||   | || |||||| || ||||||| ||||| |||||||||||||||||    
T  5538757 aaagacctagtctcatctctccatat--attttccaaacatatctttattttctg-ttatttacttttattgcaatcaaatcaaatc 5538674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 5614078 - 5614041
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  5614078 tgtggatgacaatctagtttttattcaattcaattgtt 5614041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 10498564 - 10498527
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  10498564 tgtgaatgacaatctagtttttattcaagtcaattgtt 10498527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 12582777 - 12582814
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  12582777 tgtgaatgacaatatagtttttattcaattcaattgtt 12582814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 13196626 - 13196663
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  13196626 tgtgaacgacaatctagtttttattcaattcaattgtt 13196663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 18824741 - 18824708
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  18824741 aatgacaatctagtttttattcaattcaattgtt 18824708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 18826234 - 18826201
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  18826234 aatgacaatctagtttttattcaattcaattgtt 18826201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 21280115 - 21280082
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  21280115 aatgacaatctagtttttattcaattcaattgtt 21280082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 204
Target Start/End: Original strand, 33419425 - 33419454
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaatt 204  Q
    ||||||||||||||||||||||||||||||    
T  33419425 tgtgaatgacaatctagtttttattcaatt 33419454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 36710983 - 36710950
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  36710983 aatgacaatctagtttttattcaattcaattgtt 36710950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 43682221 - 43682184
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  43682221 tgtgaatgacaatttagtttttattcaattcaattgtt 43682184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 358 - 390
Target Start/End: Complemental strand, 45155207 - 45155175
Alignment:
Q  358 tattttttgtttatttaattttatgcaatcaaa 390  Q
    |||||| ||||||||||||||||||||||||||    
T  45155207 tattttctgtttatttaattttatgcaatcaaa 45155175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1063 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 309 - 461
Target Start/End: Original strand, 2633 - 2784
Alignment:
Q  309 gactcgaaagacctagtctcatctctccatatacattttccaaaaactat----attttttgtttatttaattttatgcaatcaaatcaaatctacaaac 404  Q
    ||||||||||||||||||||||||||||||||| |||||| || | ||||    ||||| ||||||||||||||| |||||| ||||||||||| |||||    
T  2633 gactcgaaagacctagtctcatctctccatatatattttctaata-ctatttttattttctgtttatttaattttgtgcaattaaatcaaatctgcaaac 2731  T
Q  405 aaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    ||||||||||||||| | |||||| ||||||||||    ||||||||||||||||||    
T  2732 aaaataatttatacatcctaaatatttactttatt----gctaaattgagattaaca 2784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 309 - 434
Target Start/End: Complemental strand, 3272 - 3145
Alignment:
Q  309 gactcgaaagacctagtctcatctctccatatacattttccaaaaa---ctatattttttgtttatttaattttatgcaatcaaatcaaatctacaaaca 405  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||    || |||||| ||||||||||||||||||||||||||||||||||| |||||    
T  3272 gactcgaaagacctagtctcatctctc-atatatattttccaaaactatctttattttctgtttatttaattttatgcaatcaaatcaaatctataaaca 3174  T
Q  406 aaataatttatacaacttaaatacttact 434  Q
    |||||||||||||| | |||||| |||||    
T  3173 aaataatttatacatcctaaatatttact 3145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 309 - 459
Target Start/End: Original strand, 12238397 - 12238544
Alignment:
Q  309 gactcgaaagacctagtctcatctctccatatacattttccaaaaa---ctatattttttgtttatttaattttatgcaatcaaatcaaatctacaaaca 405  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||    || |||||| |||| |||||||||||||||||||||||||||||| |||||    
T  12238397 gactcgaaagacctagtctcatctctc-atatatattttccaaaactatctttattttatgtt-atttaattttatgcaatcaaatcaaatctataaaca 12238494  T
Q  406 aaataatttatacaacttaaatacttactttattgagagctaaattgagattaa 459  Q
    |||||||||||||| | |||||| ||||||||||    ||||||||||||||||    
T  12238495 aaataatttatacatcctaaatatttactttatt----gctaaattgagattaa 12238544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 358 - 461
Target Start/End: Complemental strand, 33408255 - 33408156
Alignment:
Q  358 tattttttgtttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagatt 457  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||    ||||||||||||||    
T  33408255 tattttatgtttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacatcctaaatatttactttatt----gctaaattgagatt 33408160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 368 - 461
Target Start/End: Complemental strand, 24044053 - 24043964
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||| | |||||| ||||||||||    ||||||||||||||||||    
T  24044053 ttatttaattttatacaatcaaatcaaatttacaaacaaaataatttatacatcctaaatatttactttatt----gctaaattgagattaaca 24043964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 370 - 461
Target Start/End: Original strand, 49270890 - 49270977
Alignment:
Q  370 atttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||| | ||||||||    ||||||||||||||||||    
T  49270890 atttaattgtatgcaatcaaatcaaatctacaaacaaaataatttatacatcataaatattcactttatt----gctaaattgagattaaca 49270977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 3720560 - 3720647
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | |||||| ||||||||||    ||||||||||||||||||    
T  3720560 ttatttaattttatgcaatcaaatcaaatct--aaacaaaataatttatacatcctaaatatttactttatt----gctaaattgagattaaca 3720647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 368 - 461
Target Start/End: Complemental strand, 3797740 - 3797650
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaa-tctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||| | |||||| ||||||||||    ||||||||||||||||||    
T  3797740 ttatttaattttatgcaatcaaatcaaaatatacaaacaaaataatttatacatcctaaatatttactttatt----gctaaattgagattaaca 3797650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 40795212 - 40795299
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | |||||| ||||||||||    ||||||||||||||||||    
T  40795212 ttatttaattttatgcaatcaaatcaaatct--aaacaaaataatttatacatcctaaatatttactttatt----gctaaattgagattaaca 40795299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 368 - 459
Target Start/End: Complemental strand, 15429768 - 15429683
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaa 459  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | |||||| ||||||||||||    ||||||||||||||    
T  15429768 ttatttaattttatgcaatcaaatcaaatct--aaacaaaataatttatacatcctaaatatttactttattga----taaattgagattaa 15429683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 368 - 459
Target Start/End: Complemental strand, 15436382 - 15436297
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaa 459  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | |||||| ||||||||||||    ||||||||||||||    
T  15436382 ttatttaattttatgcaatcaaatcaaatct--aaacaaaataatttatacatcctaaatatttactttattga----taaattgagattaa 15436297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 309 - 385
Target Start/End: Original strand, 5706524 - 5706603
Alignment:
Q  309 gactcgaaagacctagtctcatctctccatatacattttccaaa---aactatattttttgtttatttaattttatgcaa 385  Q
    ||||||||||||||||||||||||||||||||| ||||||||||   | || |||||| |||||||||||||||||||||    
T  5706524 gactcgaaagacctagtctcatctctccatatatattttccaaaactatctttattttctgtttatttaattttatgcaa 5706603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 12786322 - 12786409
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | |||||| | ||||||||    ||||||||||||||||||    
T  12786322 ttatttaattttatgcaatcaaatcaaatct--aaacaaaataatttatacatcctaaatattcactttatt----gctaaattgagattaaca 12786409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 368 - 439
Target Start/End: Original strand, 44164992 - 44165061
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttatt 439  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | |||||| ||||||||||    
T  44164992 ttatttaattttatgcaatcaaatcaaatct--aaacaaaataatttatacatcataaatatttactttatt 44165061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 376 - 471
Target Start/End: Original strand, 19827629 - 19827718
Alignment:
Q  376 ttttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaacaaaatcgtcgt 471  Q
    ||||||||||||||||||||||||  |||||||||||||||||| | |||||| ||||||||||    |||||||||||||||||| |||| ||||    
T  19827629 ttttatgcaatcaaatcaaatcta--aacaaaataatttatacatcctaaatatttactttatt----gctaaattgagattaacacaatcctcgt 19827718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 368 - 461
Target Start/End: Complemental strand, 38283401 - 38283314
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||| | |||||| ||||||||||     |||||||||||||||||    
T  38283401 ttatttaattttatgcaatcaaataaaatct--aaacaaaataatttatacatcctaaatatttactttatt----tctaaattgagattaaca 38283314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 368 - 461
Target Start/End: Complemental strand, 40902995 - 40902908
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||| | |||||| ||||||||||     |||||||||||||||||    
T  40902995 ttatttaattttatgcaatcaaataaaatct--aaacaaaataatttatacatcctaaatatttactttatt----actaaattgagattaaca 40902908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 368 - 461
Target Start/End: Complemental strand, 52006443 - 52006356
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| | | |||||| |||||||||     ||||||||||||||||||    
T  52006443 ttatttaattttatgcaatcaaatcaaatct--aaacaaaataatttatatatcctaaatatttactttat----cgctaaattgagattaaca 52006356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 376 - 471
Target Start/End: Original strand, 19820922 - 19821011
Alignment:
Q  376 ttttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaacaaaatcgtcgt 471  Q
    |||||||| |||||||||||||||  |||||||||||||||||| | |||||| ||||||||||    |||||||||||||||||| |||| ||||    
T  19820922 ttttatgctatcaaatcaaatcta--aacaaaataatttatacatcctaaatatttactttatt----gctaaattgagattaacacaatcctcgt 19821011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 461
Target Start/End: Complemental strand, 27676967 - 27676880
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||| |||| ||  |||||||||||||||||| | |||||| ||||||||||     |||||||||||||||||    
T  27676967 ttatttaattttatgcaatcaaataaaatata--aacaaaataatttatacatcctaaatatttactttatt----tctaaattgagattaaca 27676880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 309 - 400
Target Start/End: Original strand, 15432210 - 15432302
Alignment:
Q  309 gactcgaaagacctagtctcatctctccatatacattttccaaaaa---ctatattttttgtttatttaattttatgcaatcaaatcaaatctac 400  Q
    |||||||||||||||||||||||||||  |||  |||||||||| |   || |||||| ||||||||||||||||||||||||||||||| ||||    
T  15432210 gactcgaaagacctagtctcatctctct-tatt-attttccaaacaaatctttattttctgtttatttaattttatgcaatcaaatcaaaactac 15432302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 368 - 435
Target Start/End: Complemental strand, 48415437 - 48415372
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactt 435  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||| | |||||| ||||||    
T  48415437 ttatttaattttatgcaatcaaataaaatct--aaacaaaataatttatacatcctaaatatttactt 48415372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 381 - 440
Target Start/End: Complemental strand, 52005663 - 52005606
Alignment:
Q  381 tgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattg 440  Q
    |||||||||||||||||||  |||||||||||||||||| |||||||| |||||||||||    
T  52005663 tgcaatcaaatcaaatcta--aacaaaataatttatacatcttaaatatttactttattg 52005606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 312 - 440
Target Start/End: Original strand, 5681562 - 5681700
Alignment:
Q  312 tcgaaagacctagtctcatctctccatatacattttccaaaaa---ctatattttttgtttatttaattttatgcaatcaaatcaaatcta--------- 399  Q
    ||||||||||||||||||||||||| |||   ||||||||||    || |||||| |||| |||||||||||||||||| |||||||||||             
T  5681562 tcgaaagacctagtctcatctctccttatc--ttttccaaaactatctttattttatgtt-atttaattttatgcaatccaatcaaatctactgcccagg 5681658  T
Q  400 -caaacaaaataatttatacaacttaaatacttactttattg 440  Q
     |||||||||||||||||||| | |||||| |||||||||||    
T  5681659 gcaaacaaaataatttatacatcctaaatatttactttattg 5681700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 459
Target Start/End: Complemental strand, 15445278 - 15445192
Alignment:
Q  368 ttatttaattttatgcaatc-aaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaa 459  Q
    |||||||||||||||||||| |||||||||||  |||||||||||||| ||||   |||||| ||||||||||    ||||||||||||||||    
T  15445278 ttatttaattttatgcaatcaaaatcaaatct--aaacaaaataatttgtacattctaaatatttactttatt----gctaaattgagattaa 15445192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 5681199 - 5681236
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  5681199 tgtgaatgacaatctagtttttattcaattcaattgtt 5681236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 8875112 - 8875075
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  8875112 tgtgaatgacaatctagtttttattcaattcaattgtt 8875075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 19820499 - 19820536
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  19820499 tgtgaatgacaatctagtttttattcaattcaattgtt 19820536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 19827261 - 19827298
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  19827261 tgtgaatgacaatctagtttttattcaattcaattgtt 19827298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 21419560 - 21419597
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  21419560 tgtgaatgacaatctagtttttattcaattcaattgtt 21419597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 24044491 - 24044454
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  24044491 tgtgaatgacaatctagtttttattcaattcaattgtt 24044454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 24150443 - 24150480
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  24150443 tgtgaatgacaatctagtttttattcaattcaattgtt 24150480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 25961829 - 25961866
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  25961829 tgtgaatgacaatctagtttttattcaattcaattgtt 25961866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 27014034 - 27014071
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  27014034 tgtgaatgacaatctagtttttattcaattcaattgtt 27014071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 27691494 - 27691457
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  27691494 tgtgaatgacaatctagtttttattcaattcaattgtt 27691457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 29545224 - 29545187
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  29545224 tgtgaatgacaatctagtttttattcaattcaattgtt 29545187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 37103565 - 37103528
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  37103565 tgtgaatgacaatctagtttttattcaattcaattgtt 37103528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 38283839 - 38283802
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  38283839 tgtgaatgacaatctagtttttattcaattcaattgtt 38283802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 39501419 - 39501456
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  39501419 tgtgaatgacaatctagtttttattcaattcaattgtt 39501456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 40493718 - 40493681
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  40493718 tgtgaatgacaatctagtttttattcaattcaattgtt 40493681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 40903434 - 40903397
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  40903434 tgtgaatgacaatctagtttttattcaattcaattgtt 40903397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 48415880 - 48415843
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  48415880 tgtgaatgacaatctagtttttattcaattcaattgtt 48415843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 48637276 - 48637313
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  48637276 tgtgaatgacaatctagtttttattcaattcaattgtt 48637313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 52531286 - 52531249
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  52531286 tgtgaatgacaatctagtttttattcaattcaattgtt 52531249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 207
Target Start/End: Complemental strand, 8448893 - 8448861
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaa 207  Q
    |||||||||||||||||||||||||||||||||    
T  8448893 tgtgaatgacaatctagtttttattcaattcaa 8448861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 207
Target Start/End: Original strand, 49270454 - 49270486
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaa 207  Q
    |||||||||||||||||||||||||||||||||    
T  49270454 tgtgaatgacaatctagtttttattcaattcaa 49270486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 205
Target Start/End: Complemental strand, 52006881 - 52006851
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattc 205  Q
    |||||||||||||||||||||||||||||||    
T  52006881 tgtgaatgacaatctagtttttattcaattc 52006851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 3718895 - 3718932
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  3718895 tgtgaatgaaaatctagtttttattcaattcaattgtt 3718932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 204
Target Start/End: Original strand, 12238039 - 12238068
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaatt 204  Q
    ||||||||||||||||||||||||||||||    
T  12238039 tgtgaatgacaatctagtttttattcaatt 12238068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 15405431 - 15405398
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  15405431 aatgacaatctagtttttattcaattcaattgtt 15405398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 15430206 - 15430169
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  15430206 tgtgaatgactatctagtttttattcaattcaattgtt 15430169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 15436820 - 15436783
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  15436820 tgtgaatgactatctagtttttattcaattcaattgtt 15436783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 15812484 - 15812451
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  15812484 aatgacaatctagtttttattcaattcaattgtt 15812451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 204
Target Start/End: Complemental strand, 18673421 - 18673392
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaatt 204  Q
    ||||||||||||||||||||||||||||||    
T  18673421 tgtgaatgacaatctagtttttattcaatt 18673392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 18911325 - 18911362
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  18911325 tgtgaatgacaatttagtttttattcaattcaattgtt 18911362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 27677405 - 27677368
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  27677405 tgtgaatgacaatctagtttttgttcaattcaattgtt 27677368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 29324600 - 29324633
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  29324600 aatgacaatctagtttttattcaattcaattgtt 29324633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 33408668 - 33408631
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  33408668 tgtgaatgacaatctagtttttattcaactcaattgtt 33408631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 34018132 - 34018095
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  34018132 tgtgaatgacagtctagtttttattcaattcaattgtt 34018095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 34320264 - 34320231
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  34320264 aatgacaatctagtttttattcaattcaattgtt 34320231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 35509736 - 35509773
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  35509736 tgtgaatgataatctagtttttattcaattcaattgtt 35509773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 56195302 - 56195335
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  56195302 aatgacaatctagtttttattcaattcaattgtt 56195335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 5670342 - 5670374
Alignment:
Q  180 atgacaatctagtttttattcaattcaactgtt 212  Q
    |||||||||||||||||||||||||||| ||||    
T  5670342 atgacaatctagtttttattcaattcaattgtt 5670374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 5672660 - 5672692
Alignment:
Q  180 atgacaatctagtttttattcaattcaactgtt 212  Q
    |||||||||||||||||||||||||||| ||||    
T  5672660 atgacaatctagtttttattcaattcaattgtt 5672692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 461
Target Start/End: Original strand, 35510221 - 35510278
Alignment:
Q  400 caaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||| | |||||| | ||||||||    ||||||||||||||||||    
T  35510221 caaacaaaataatttatacatcctaaatattcactttatt----gctaaattgagattaaca 35510278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 358 - 461
Target Start/End: Original strand, 42022828 - 42022927
Alignment:
Q  358 tattttttgtttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagatt 457  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||     ||||||||||||    
T  42022828 tattttatgtttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacatcctaaatatttactttattgt----taaattgagatt 42022923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 2405721 - 2405808
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | |||||| ||||||||||    ||||||||||||||||||    
T  2405721 ttatttaattttatgcaatcaaatcaaatct--aaacaaaataatttatacatcctaaatatttactttatt----gctaaattgagattaaca 2405808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 368 - 466
Target Start/End: Complemental strand, 6070883 - 6070788
Alignment:
Q  368 ttatttaatttt-atgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaacaaaatc 466  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||| | |||||| ||||||||||     ||||||||||||||||| ||||    
T  6070883 ttatttaatttttatgcaatcaaatcaaatctagaaacaaaataatttatacatcctaaatatttactttatt----tctaaattgagattaacacaatc 6070788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 368 - 466
Target Start/End: Complemental strand, 49853050 - 49852958
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaacaaaatc 466  Q
    |||||||||||||||||||||||||||||   |||||||||||||||||||| | |||||| ||||||||||    |||||||||||||||||| ||||    
T  49853050 ttatttaattttatgcaatcaaatcaaatt--caaacaaaataatttatacatcctaaatatttactttatt----gctaaattgagattaacacaatc 49852958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 21111070 - 21111000
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattg 440  Q
    ||||||||||||| ||||||||||||||||||  |||||||||||||||||| | |||||| |||||||||||    
T  21111070 ttatttaattttaggcaatcaaatcaaatcta--aacaaaataatttatacatcctaaatatttactttattg 21111000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 368 - 461
Target Start/End: Complemental strand, 41058214 - 41058127
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| | | |||||| ||||||||||    ||||||||||||||||||    
T  41058214 ttatttaattttatgcaatcaaataaaatct--aaacaaaataatttatatatcctaaatatttactttatt----gctaaattgagattaaca 41058127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 45941628 - 45941715
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||| | |||||| ||||||||||     |||||||||||||||||    
T  45941628 ttatttaattttatgcaatcaaataaaatct--aaacaaaataatttatacatcctaaatatttactttatt----tctaaattgagattaaca 45941715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 673423 - 673386
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  673423 tgtgaatgacaatctagtttttattcaattcaattgtt 673386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 906039 - 906002
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  906039 tgtgaatgacaatctagtttttattcaattcaattgtt 906002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 2405283 - 2405320
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  2405283 tgtgaatgacaatctagtttttattcaattcaattgtt 2405320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 3797176 - 3797139
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  3797176 tgtgaatgacaatctagtttttattcaattcaattgtt 3797139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 20398626 - 20398663
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  20398626 tgtgaatgacaatctagtttttattcaattcaattgtt 20398663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 21018816 - 21018779
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  21018816 tgtgaatgacaatatagtttttattcaattcaactgtt 21018779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 41058652 - 41058615
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  41058652 tgtgaatgacaatctagtttttattcaattcaattgtt 41058615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 42022448 - 42022485
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  42022448 tgtgaatgacaatctagtttttattcaattcaattgtt 42022485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 49853428 - 49853391
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  49853428 tgtgaatgacaatctagtttttattcaattcaattgtt 49853391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 1950805 - 1950768
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  1950805 tgtgaatgataatctagtttttattcaattcaattgtt 1950768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 2794001 - 2794038
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  2794001 tgtgaatgacaatttagtttttattcaattcaattgtt 2794038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 6071300 - 6071267
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  6071300 aatgacaatctagtttttattcaattcaattgtt 6071267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 11668376 - 11668339
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  11668376 tgtgaatgataatctagtttttattcaattcaattgtt 11668339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 21018379 - 21018309
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattg 440  Q
    |||||||||||||||||||||||| |||   | ||||||||||||||||| |   |||||| |||||||||||    
T  21018379 ttatttaattttatgcaatcaaataaaa--aataaacaaaataatttatatattctaaatatttactttattg 21018309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 23022274 - 23022237
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  23022274 tgtgaatgataatctagtttttattcaattcaattgtt 23022237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 28110830 - 28110867
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  28110830 tgtgaatgacaatctagtttttatttaattcaattgtt 28110867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 31204615 - 31204648
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  31204615 aatgacaatctagtttttattcaattcaattgtt 31204648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 34732710 - 34732673
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  34732710 tgtgaatgataatctagtttttattcaattcaattgtt 34732673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 37184210 - 37184177
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  37184210 aatgacaatctagtttttattcaattcaattgtt 37184177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 45941193 - 45941226
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  45941193 aatgacaatctagtttttattcaattcaattgtt 45941226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 45961091 - 45961058
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  45961091 aatgacaatctagtttttattcaattcaattgtt 45961058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 49498848 - 49498811
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  49498848 tgtgaatgataatctagtttttattcaattcaattgtt 49498811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 3e-27; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 368 - 463
Target Start/End: Complemental strand, 13971826 - 13971735
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaacaaa 463  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| | ||||||||    ||||||||||||||||||||    
T  13971826 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacatcctaaatattcactttatt----gctaaattgagattaacaaa 13971735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 43723892 - 43723979
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | |||||| ||||||||||    ||||||||||||||||||    
T  43723892 ttatttaattttatgcaatcaaatcaaatct--aaacaaaataatttatacatcctaaatatttactttatt----gctaaattgagattaaca 43723979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 6826963 - 6827050
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| | | |||||| ||||||||||    ||||||||||||||||||    
T  6826963 ttatttaattttatgcaatcaaatcaaatct--aaacaaaataatttatatatcctaaatatttactttatt----gctaaattgagattaaca 6827050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 368 - 440
Target Start/End: Original strand, 5666709 - 5666779
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattg 440  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||| |||||||||||    
T  5666709 ttatttaattttatgcaatcaaatcaaatctacaaa-aaaataatttatacatcctaaata-ttactttattg 5666779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 368 - 439
Target Start/End: Complemental strand, 43207801 - 43207732
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttatt 439  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||| | |||||| ||||||||||    
T  43207801 ttatttaattttatgcaatcaaataaaatct--aaacaaaataatttatacatcctaaatatttactttatt 43207732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 358 - 461
Target Start/End: Complemental strand, 31585862 - 31585766
Alignment:
Q  358 tattttttgtttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagatt 457  Q
    ||||||||||| |||||||||||||||||||||| ||||||  ||||||||||||||||||| | || ||| ||||||||||     |||||||||||||    
T  31585862 tattttttgtt-atttaattttatgcaatcaaataaaatct--aaacaaaataatttatacatcctagatatttactttatt----tctaaattgagatt 31585770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 5105900 - 5105987
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||| | | |||| ||||||||||     |||||||||||||||||    
T  5105900 ttatttaattttatgcaatcaaataaaatct--aaacaaaataatttatacatcctgaatatttactttatt----tctaaattgagattaaca 5105987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 315 - 440
Target Start/End: Original strand, 26366054 - 26366176
Alignment:
Q  315 aaagacctagtctcatctctccatatacattttccaaaaa---ctatattttttgtttatttaattttatgcaatcaaatcaaatctacaaacaaaataa 411  Q
    ||||||||||||||||||||| ||||| |||||||||||    || |||||| |||| ||||| ||||||    |  |||||||||||||||||||||||    
T  26366054 aaagacctagtctcatctctc-atatatattttccaaaactatctttattttctgtt-atttacttttat----tgcaatcaaatctacaaacaaaataa 26366147  T
Q  412 tttatacaacttaaatacttactttattg 440  Q
    |||||||| | |||||| |||||||||||    
T  26366148 tttatacatcctaaatatttactttattg 26366176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 40781664 - 40781751
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||| |||| ||  |||||||||||||||||| | |||||| ||||||||||     |||||||||||||||||    
T  40781664 ttatttaattttatgcaatcaaataaaatata--aacaaaataatttatacatcctaaatatttactttatt----tctaaattgagattaaca 40781751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 461
Target Start/End: Complemental strand, 42368622 - 42368535
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||  |||||||  |||||||||||||||||| | |||||| ||||||||||     |||||||||||||||||    
T  42368622 ttatttaattttatgcaatcaaacaaaatcta--aacaaaataatttatacatcctaaatatttactttatt----tctaaattgagattaaca 42368535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 461
Target Start/End: Complemental strand, 25138862 - 25138763
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatcta----------caaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagatt 457  Q
    ||||||||||||||||||||||||||||||||          |||||||||||||||||||| | ||| || ||||||||||    ||||||||||||||    
T  25138862 ttatttaattttatgcaatcaaatcaaatctactgcctagggcaaacaaaataatttatacatcctaagtatttactttatt----gctaaattgagatt 25138767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 1386773 - 1386736
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  1386773 tgtgaatgacaatctagtttttattcaattcaattgtt 1386736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 5105480 - 5105517
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  5105480 tgtgaatgacaatctagtttttattcaattcaattgtt 5105517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 5666272 - 5666309
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  5666272 tgtgaatgacaatctagtttttattcaattcaattgtt 5666309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 6826526 - 6826563
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  6826526 tgtgaatgacaatctagtttttattcaattcaattgtt 6826563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 8888389 - 8888426
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  8888389 tgtgaatgacaatctagtttttattcaattcaattgtt 8888426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 9185776 - 9185739
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  9185776 tgtgaatgacaatctagtttttattcaattcaattgtt 9185739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 11348247 - 11348210
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  11348247 tgtgaatgacaatctagtttttattcaattcaattgtt 11348210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 12219549 - 12219586
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  12219549 tgtgaatgacaatctagtttttattcaattcaattgtt 12219586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 16791110 - 16791073
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  16791110 tgtgaatgacaatctagtttttattcaattcaattgtt 16791073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 22630595 - 22630632
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  22630595 tgtgaatgataatctagtttttattcaattcaactgtt 22630632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 25960040 - 25960003
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  25960040 tgtgaatgacaatctagtttttattcaattcaattgtt 25960003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 26365687 - 26365724
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  26365687 tgtgaatgacaatctagtttttattcaattcaattgtt 26365724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 30275120 - 30275083
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  30275120 tgtgaatgacaatctagtttttattcaattcaattgtt 30275083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 37280028 - 37279991
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  37280028 tgtgaatgacaatctagtttttattcaattcaattgtt 37279991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 40259490 - 40259453
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  40259490 tgtgaatgacaatctagtttttattcaattcaattgtt 40259453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 40781226 - 40781263
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  40781226 tgtgaatgacaatctagtttttattcaattcaattgtt 40781263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 42369062 - 42369025
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  42369062 tgtgaatgacaatctagtttttattcaattcaattgtt 42369025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 43208241 - 43208204
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  43208241 tgtgaatgacaatctagtttttattcaattcaattgtt 43208204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 17876361 - 17876325
Alignment:
Q  176 gtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    |||||||||||||||||||||||||||||||| ||||    
T  17876361 gtgaatgacaatctagtttttattcaattcaattgtt 17876325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 397
Target Start/End: Complemental strand, 25820834 - 25820748
Alignment:
Q  312 tcgaaagacctagtctcatctctccatatacattttccaaa---aactatattttttgtttatttaatttta-tgcaatcaaatcaaatc 397  Q
    |||||||||||||||||||||||||||||  ||||||||||   | || |||||| || ||||||| ||||| |||||||||||||||||    
T  25820834 tcgaaagacctagtctcatctctccatat--attttccaaacatatctttattttctg-ttatttacttttattgcaatcaaatcaaatc 25820748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 212
Target Start/End: Complemental strand, 9189002 - 9188967
Alignment:
Q  177 tgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||| ||||    
T  9189002 tgaatgacaatctagtttttattcaattcaattgtt 9188967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 212
Target Start/End: Original strand, 17876862 - 17876897
Alignment:
Q  177 tgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||| ||||    
T  17876862 tgaatgacaatctagtttttattcaattcaattgtt 17876897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 3875040 - 3875077
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  3875040 tgtgaatgataatctagtttttattcaattcaattgtt 3875077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 10600700 - 10600737
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  10600700 tgtgaatgacaatctagattttattcaattcaattgtt 10600737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 428
Target Start/End: Original strand, 15470650 - 15470708
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaata 428  Q
    ||||||||||||||| |||||||| ||||||  ||||||||||||||| ||| | ||||||    
T  15470650 ttatttaattttatgtaatcaaataaaatct--aaacaaaataatttacacatcctaaata 15470708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 16178881 - 16178918
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  16178881 tgtgaatgacaatctagtttttatttaattcaattgtt 16178918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 22020821 - 22020858
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  22020821 tgtgaatgacaatctagtttttattcaactcaattgtt 22020858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 24234849 - 24234886
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  24234849 tgtgaatgacaatctagtttttatttaattcaattgtt 24234886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 24238121 - 24238158
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  24238121 tgtgaatgacaatctagtttttatttaattcaattgtt 24238158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 204
Target Start/End: Complemental strand, 25139283 - 25139254
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaatt 204  Q
    ||||||||||||||||||||||||||||||    
T  25139283 tgtgaatgacaatctagtttttattcaatt 25139254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 25821197 - 25821160
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  25821197 tgtgaatgataatctagtttttattcaattcaattgtt 25821160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 25873929 - 25873966
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  25873929 tgtgaattacaatctagtttttattcaattcaattgtt 25873966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 204
Target Start/End: Original strand, 27266542 - 27266571
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaatt 204  Q
    ||||||||||||||||||||||||||||||    
T  27266542 tgtgaatgacaatctagtttttattcaatt 27266571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 30926301 - 30926338
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  30926301 tgtgaatgtcaatctagtttttattcaattcaattgtt 30926338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 31586292 - 31586255
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  31586292 tgtgaatgacaatctagttttgattcaattcaattgtt 31586255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 33310424 - 33310457
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  33310424 aatgacaatctagtttttattcaattcaattgtt 33310457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 36808793 - 36808756
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    |||||||||||||||| |||||||||||||||| ||||    
T  36808793 tgtgaatgacaatctaatttttattcaattcaattgtt 36808756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 37937570 - 37937533
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  37937570 tgtgaatgacaatctagtttttattgaattcaattgtt 37937533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 38015276 - 38015309
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  38015276 aatgacaatctagtttttattcaattcaattgtt 38015309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 43723455 - 43723492
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  43723455 tgtgaataacaatctagtttttattcaattcaattgtt 43723492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 45453632 - 45453665
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  45453632 aatgacaatctagtttttattcaattcaattgtt 45453665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 369 - 461
Target Start/End: Original strand, 27320 - 27408
Alignment:
Q  369 tatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||| | |||||| ||||||||||    ||||||||||||||||||    
T  27320 tatttaattttatgcaatcaaatcaaatctaaaaacaaaataatttacacatcctaaatatttactttatt----gctaaattgagattaaca 27408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 358 - 461
Target Start/End: Original strand, 293207 - 293306
Alignment:
Q  358 tattttttgtttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagatt 457  Q
    |||||| ||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||| | |||||| ||||||||||     |||||||||||||    
T  293207 tattttctgtttatttaattatatacaatcaaatcaaatctacaaaaaaaataatttatacatcctaaatatttactttatt----tctaaattgagatt 293302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 292795 - 292832
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  292795 tgtgaatgacaatttagtttttattcaattcaattgtt 292832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 54; Significance: 8e-22; HSPs: 4)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 368 - 461
Target Start/End: Complemental strand, 8131 - 8044
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | |||||| ||||||||||    ||||||||||||||||||    
T  8131 ttatttaattttatgcaatcaaatcaaatct--aaacaaaataatttatacatcctaaatatttactttatt----gctaaattgagattaaca 8044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 368 - 461
Target Start/End: Complemental strand, 1461 - 1374
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||  | |||||| ||||||||||    ||||||||||||||||||    
T  1461 ttatttaattttatgcaatcaaatcaaatct--aaacaaaataatttatacgtcctaaatatttactttatt----gctaaattgagattaaca 1374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 207
Target Start/End: Complemental strand, 4330 - 4298
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaa 207  Q
    |||||||||||||||||||||||||||||||||    
T  4330 tgtgaatgacaatctagtttttattcaattcaa 4298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 207
Target Start/End: Complemental strand, 8569 - 8537
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaa 207  Q
    |||||||||||||||||||||||||||||||||    
T  8569 tgtgaatgacaatctagtttttattcaattcaa 8537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 368 - 440
Target Start/End: Original strand, 248728 - 248800
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattg 440  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| | | |||| |||||||||||    
T  248728 ttatttaattttatgcaatcaaatcaaatttacaaacaaaataatttatacatccttaatatttactttattg 248800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 2e-19; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 17106541 - 17106471
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattg 440  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | |||||| |||||||||||    
T  17106541 ttatttaattttatgcaatcaaatcaaatct--aaacaaaataatttatacatcctaaatatttactttattg 17106471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 10290184 - 10290273
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||| | | |||||| | ||||||||    ||||||||||||||||||    
T  10290184 ttatttaattttatgcaatcaaatcaaatctacgaacaaaaaaatttatatatcctaaatattcactttatt----gctaaattgagattaaca 10290273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 368 - 461
Target Start/End: Complemental strand, 11188120 - 11188033
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||| | |||||| ||||||||||     |||||||||||||||||    
T  11188120 ttatttaattttatgcaatcaaataaaatct--aaacaaaataatttatacatcctaaatatttactttatt----tctaaattgagattaaca 11188033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 368 - 437
Target Start/End: Original strand, 23847983 - 23848050
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttacttta 437  Q
    ||||||||||||||| |||||||||||||||  ||||||||||||||||||| | |||||| ||||||||    
T  23847983 ttatttaattttatgaaatcaaatcaaatct--aaacaaaataatttatacatcctaaatatttacttta 23848050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 461
Target Start/End: Complemental strand, 11729252 - 11729165
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||||||||||||||  |||||||  |||||||||||||||||| | |||||| ||||||||||     |||||||||||||||||    
T  11729252 ttatttaattttatgcaatcaaacaaaatcta--aacaaaataatttatacatcctaaatatttactttatt----tctaaattgagattaaca 11729165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 461
Target Start/End: Complemental strand, 23842711 - 23842624
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    ||||||||||||||||||| | ||||||||||  |||||||||||||||||| | |||||| ||| ||||||    ||||||||||||||||||    
T  23842711 ttatttaattttatgcaattagatcaaatcta--aacaaaataatttatacatcctaaatatttattttatt----gctaaattgagattaaca 23842624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 368 - 435
Target Start/End: Original strand, 20185956 - 20186021
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactt 435  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||||||||| | |||||| ||||||    
T  20185956 ttatttaattttatgcaatgaaatcaaatct--aaacaaaataatttatacatcctaaatatttactt 20186021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 368 - 435
Target Start/End: Complemental strand, 22150035 - 22149970
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactt 435  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||||||||| | |||||| ||||||    
T  22150035 ttatttaattttatgcaatgaaatcaaatct--aaacaaaataatttatacatcctaaatatttactt 22149970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 30655659 - 30655746
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||||||||| ||||||||||  |||||||  |||||||||||||||||| | |||||| ||||||||||     |||||||||||||||||    
T  30655659 ttatttaattttttgcaatcaaacaaaatcta--aacaaaataatttatacatcctaaatatttactttatt----tctaaattgagattaaca 30655746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 1126086 - 1126049
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  1126086 tgtgaatgacaatctagtttttattcaattcaattgtt 1126049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 5259710 - 5259747
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  5259710 tgtgaatgacaatctagtttttattcaattcaattgtt 5259747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 5738435 - 5738398
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  5738435 tgtgaatgacaatctagtttttattcaattcaattgtt 5738398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 9953737 - 9953774
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  9953737 tgtgaatgacaatctagtttttattcaattcaattgtt 9953774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 11126046 - 11126009
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  11126046 tgtgaatgacaatctagtttttattcaattcaattgtt 11126009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 11188266 - 11188229
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  11188266 tgtgaatgacaatctagtttttattcaattcaattgtt 11188229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 11402030 - 11402067
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  11402030 tgtgaatgacaatctagtttttattcaattcaattgtt 11402067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 13946792 - 13946829
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  13946792 tgtgaatgacaatctagtttttattcaattcaattgtt 13946829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 18856375 - 18856338
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  18856375 tgtgaatgacaatctagtttttattcaattcaattgtt 18856338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 20185518 - 20185555
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  20185518 tgtgaatgacaatctagtttttattcaattcaattgtt 20185555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 22150473 - 22150436
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  22150473 tgtgaatgacaatctagtttttattcaattcaattgtt 22150436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 23388447 - 23388410
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  23388447 tgtgaatgacaatctagtttttattcaattcaattgtt 23388410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 24399953 - 24399990
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  24399953 tgtgaatgacaatctagtttttattcaattcaattgtt 24399990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 26898219 - 26898182
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  26898219 tgtgaatgacaatctagtttttattcaattcaattgtt 26898182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 28665614 - 28665577
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  28665614 tgtgaatgacaatctagtttttattcaattcaattgtt 28665577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 30655217 - 30655254
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  30655217 tgtgaatgacaatctagtttttattcaattcaattgtt 30655254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 207
Target Start/End: Original strand, 2379003 - 2379035
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaa 207  Q
    |||||||||||||||||||||||||||||||||    
T  2379003 tgtgaatgacaatctagtttttattcaattcaa 2379035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 24410074 - 24410110
Alignment:
Q  176 gtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    |||||||||||||||||||||||||||||||| ||||    
T  24410074 gtgaatgacaatctagtttttattcaattcaattgtt 24410110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 207
Target Start/End: Original strand, 28230368 - 28230400
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaa 207  Q
    |||||||||||||||||||||||||||||||||    
T  28230368 tgtgaatgacaatctagtttttattcaattcaa 28230400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 212
Target Start/End: Complemental strand, 3597130 - 3597095
Alignment:
Q  177 tgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||| ||||    
T  3597130 tgaatgacaatctagtttttattcaattcaattgtt 3597095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 212
Target Start/End: Complemental strand, 9839743 - 9839708
Alignment:
Q  177 tgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||| ||||    
T  9839743 tgaatgacaatctagtttttattcaattcaattgtt 9839708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 206
Target Start/End: Original strand, 19475776 - 19475807
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattca 206  Q
    ||||||||||||||||||||||||||||||||    
T  19475776 tgtgaatgacaatctagtttttattcaattca 19475807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 212
Target Start/End: Complemental strand, 28108137 - 28108102
Alignment:
Q  177 tgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||| ||||    
T  28108137 tgaatgacaatctagtttttattcaattcaattgtt 28108102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 392
Target Start/End: Original strand, 24371355 - 24371435
Alignment:
Q  312 tcgaaagacctagtctcatctctccatatacattttcca---aaaactatattttttgtttatttaattttatgcaatcaaatc 392  Q
    |||||| ||||||||||||||||||||||  ||||||||   ||| || |||||| || ||||||| |||||||||||||||||    
T  24371355 tcgaaatacctagtctcatctctccatat--attttccaaacaaatctttattttctg-ttatttacttttatgcaatcaaatc 24371435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 2846075 - 2846112
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  2846075 tgtgaataacaatctagtttttattcaattcaattgtt 2846112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 4512246 - 4512283
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  4512246 tgtgaatgacaatatagtttttattcaattcaattgtt 4512283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 6513025 - 6513062
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  6513025 tgtgaatgacaatctagtttttactcaattcaattgtt 6513062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 26942785 - 26942748
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  26942785 tgtgaatgacaatctcgtttttattcaattcaattgtt 26942748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 31072082 - 31072115
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  31072082 aatgacaatctagtttttattcaattcaattgtt 31072115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 175 - 203
Target Start/End: Original strand, 10289746 - 10289774
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaat 203  Q
    |||||||||||||||||||||||||||||    
T  10289746 tgtgaatgacaatctagtttttattcaat 10289774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 358 - 390
Target Start/End: Complemental strand, 14281456 - 14281424
Alignment:
Q  358 tattttttgtttatttaattttatgcaatcaaa 390  Q
    |||||| ||||||||||||||||||||||||||    
T  14281456 tattttctgtttatttaattttatgcaatcaaa 14281424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 14281869 - 14281829
Alignment:
Q  177 tgaatgacaatctagtttttattcaattcaactgtttttat 217  Q
    ||||| ||||||||||||||||||||||||| |||| ||||    
T  14281869 tgaataacaatctagtttttattcaattcaattgttcttat 14281829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 358 - 390
Target Start/End: Complemental strand, 28107691 - 28107659
Alignment:
Q  358 tattttttgtttatttaattttatgcaatcaaa 390  Q
    |||||| ||||||||||||||||||||||||||    
T  28107691 tattttctgtttatttaattttatgcaatcaaa 28107659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 358 - 390
Target Start/End: Complemental strand, 28111743 - 28111711
Alignment:
Q  358 tattttttgtttatttaattttatgcaatcaaa 390  Q
    |||||| ||||||||||||||||||||||||||    
T  28111743 tattttatgtttatttaattttatgcaatcaaa 28111711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 275 - 362
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattgagagctaaattgagattaaca 461  Q
    |||||| ||||||||||||||||||||||||  |||||||||||||||| || | |||||| ||||||||||    ||||||||||||||||||    
T  275 ttatttcattttatgcaatcaaatcaaatct--aaacaaaataatttattcatcctaaatatttactttatt----gctaaattgagattaaca 362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 368 - 439
Target Start/End: Original strand, 5562 - 5631
Alignment:
Q  368 ttatttaattttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttatt 439  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| | | |||||| ||||||||||    
T  5562 ttatttaattttatgcaatcaaatcaaatct--aaacaaaataatttatatatcctaaatatttactttatt 5631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 5124 - 5165
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgttttta 216  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  5124 tgtgaatgacaatatagtttttattcaattcaactgttttta 5165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 57940 - 57899
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgttttta 216  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  57940 tgtgaatgacaatctagtttttattcaattcaattgttttta 57899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 4139 - 4102
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  4139 tgtgaatgaaaatctagtttttattcaattcaactgtt 4102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 3362 - 3325
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  3362 tgtgaatgacaatctagtttttattcaattcaattgtt 3325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 19167 - 19204
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  19167 tgtgaatgacaatctagtttttattcaattcaattgtt 19204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 19067 - 19104
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  19067 tgtgaatgacaatctagtttttattcaattcaattgtt 19104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 29137 - 29174
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  29137 tgtgaatgacaatctagtttttattcaattcaattgtt 29174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 59033 - 58996
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  59033 tgtgaatgacaatctagtttttattcaattcaattgtt 58996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 24593 - 24630
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  24593 tgtgaatgacaatctagtttttattcaattcaattgtt 24630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 62289 - 62326
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  62289 tgtgaatgacaatctagtttttattcaattcaattgtt 62326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 63640 - 63677
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  63640 tgtgaatgacattctagtttttattcaattcaattgtt 63677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 207
Target Start/End: Original strand, 30866 - 30898
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaa 207  Q
    |||||||||||||||||||||||||||||||||    
T  30866 tgtgaatgacaatctagtttttattcaattcaa 30898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 212
Target Start/End: Complemental strand, 67873 - 67838
Alignment:
Q  177 tgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||||| ||||    
T  67873 tgaatgacaatctagtttttattcaattcaattgtt 67838  T

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Target: scaffold0015 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 440
Target Start/End: Original strand, 198362 - 198424
Alignment:
Q  375 attttatgcaatcaaatcaaatctacaaacaaaataatttatacaacttaaatacttactttattg 440  Q
    ||||||||||||||||||||||||  |||||||||| |||||| | | |||||| |||||||||||    
T  198362 attttatgcaatcaaatcaaatct--aaacaaaatattttata-atcctaaatatttactttattg 198424  T

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Target: scaffold1785 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1785
Description:

Target: scaffold1785; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 1030 - 1067
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  1030 tgtgaatgacattctagtttttattcaattcaattgtt 1067  T

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Target: scaffold0218 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 10185 - 10218
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  10185 aatgacaatctagtttttattcaattcaattgtt 10218  T

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Target: scaffold0191 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 1518 - 1555
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  1518 tgtgtatgacaatctagtttttattcaattcaattgtt 1555  T

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Target: scaffold0045 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 89545 - 89578
Alignment:
Q  179 aatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  89545 aatgacaatctagtttttattcaattcaattgtt 89578  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 118796 - 118759
Alignment:
Q  175 tgtgaatgacaatctagtttttattcaattcaactgtt 212  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  118796 tgtgaatgacaatttagtttttattcaattcaattgtt 118759  T

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