View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2978_low_13 (Length: 234)
Name: NF2978_low_13
Description: NF2978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2978_low_13 |
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Alignment Details
Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 18 - 218
Target Start/End: Original strand, 8843302 - 8843501
Alignment:
| Q |
18 |
actaataactaataaaatagccataatccttcaagggttgagtctaaaaagaatcaaggtcctccagcttaaaagctcctctacaaacgtaagcaggata |
117 |
Q |
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| T |
8843302 |
actaataactaataaaatagccataatccttcaagggttgagtctaaaaagaatcaaggtcctccagcttaaaagctcctctacaaacgtaagcaggatg |
8843401 |
T |
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| Q |
118 |
ctaaaaccacaccaaaaggttagtacatttcgcaatccaatttaagccacaccatgcatgacaccacagaagctaaagtagcctcagcaaagagcattca |
217 |
Q |
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| T |
8843402 |
ctaaaaccacacc-aaaggttagtacatttcgcaatccaatttaagccacaccatgcatgacaccacagaagctaaagtagcctcagcaaagagcattca |
8843500 |
T |
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