View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2978_low_8 (Length: 294)
Name: NF2978_low_8
Description: NF2978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2978_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 11 - 278
Target Start/End: Complemental strand, 7752710 - 7752443
Alignment:
| Q |
11 |
cagagacaccgggaaagacagcgaatgtgaaaaattggaggaacggaaggtttactaccgatgttgggatctcgccaacgacgtcattggtgtcactaac |
110 |
Q |
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| T |
7752710 |
cagagacaccgggaaagacagcaaatgtaaaaaattggaggaacggaaggtttactaccgaggttgggatctcgccaatgacgtcattggtgtcactaac |
7752611 |
T |
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| Q |
111 |
tgcaagcatggtcacacggccatttgaattgcattctatgcctgaccaatttttacagcagtcagtgataggatcccaggttgtgaagactgaggcattg |
210 |
Q |
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| T |
7752610 |
tgcaagcatggtcacacggccatttgaattgcattctatgcctgaccaatttttacagcagtcagtgataggatcccatgttgtgaagactgaggcattg |
7752511 |
T |
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| Q |
211 |
ttgaattgagatttaatcccaagtaggacatttttgtcatttgtgttgcatatagtggtggagaaaga |
278 |
Q |
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| T |
7752510 |
ttgaattgagatttaatcccaagtaggacatttttgtcatttgtgttgcatatagtggtggagaaaga |
7752443 |
T |
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