View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2979_low_11 (Length: 259)
Name: NF2979_low_11
Description: NF2979
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2979_low_11 |
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Alignment Details
Target: chr2 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 12 - 249
Target Start/End: Original strand, 34018474 - 34018711
Alignment:
| Q |
12 |
atcatcaccaataacatcttgatttatcattctctgaagaaaaacactagcaagaaaaacaaattgtgctttacactgtatctactgcttgaacttgctg |
111 |
Q |
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| T |
34018474 |
atcaacaccaataacatcttgatttatcattctctgaagaaaaacactagcaagaaaaacaaattgtgctttacactgtatctactgcttgaacttgctg |
34018573 |
T |
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| Q |
112 |
ccgagccaggtacttttcccttctttctttctataaacatttggagacaatttagggctcaagtaataaaacatatatttaactgaaaacgctaaagagc |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34018574 |
ccgagccaggtacttttcccttctttctttctataaacatttggagacaatttagggctcaagtaataaaacatatatttaactgaaaacgctaaagagc |
34018673 |
T |
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| Q |
212 |
acaaactaacccctaaacattttacatacccattcatc |
249 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
34018674 |
acaaactaacccctaaacattttacatacccattcatc |
34018711 |
T |
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