View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2979_low_4 (Length: 365)

Name: NF2979_low_4
Description: NF2979
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2979_low_4
NF2979_low_4
[»] chr4 (85 HSPs)
chr4 (149-347)||(44692758-44692954)
chr4 (3-149)||(37089211-37089357)
chr4 (3-149)||(5635317-5635461)
chr4 (3-149)||(2484714-2484858)
chr4 (3-151)||(31849437-31849584)
chr4 (3-148)||(8631260-8631404)
chr4 (1-148)||(9176315-9176461)
chr4 (1-148)||(47868747-47868894)
chr4 (3-132)||(11435302-11435430)
chr4 (11-148)||(24348557-24348692)
chr4 (3-132)||(51015593-51015720)
chr4 (3-148)||(9173987-9174131)
chr4 (3-148)||(11437710-11437855)
chr4 (3-130)||(22132248-22132376)
chr4 (6-151)||(7941674-7941817)
chr4 (3-148)||(26085818-26085962)
chr4 (3-149)||(14633666-14633811)
chr4 (3-132)||(22044249-22044376)
chr4 (3-132)||(22046544-22046671)
chr4 (3-133)||(11008424-11008553)
chr4 (11-148)||(5198759-5198895)
chr4 (3-133)||(38409552-38409680)
chr4 (3-132)||(18847500-18847627)
chr4 (11-148)||(9148591-9148727)
chr4 (3-130)||(22134476-22134603)
chr4 (3-148)||(53405481-53405626)
chr4 (3-149)||(6765192-6765336)
chr4 (11-133)||(11006110-11006231)
chr4 (6-148)||(22782577-22782719)
chr4 (3-148)||(16931631-16931774)
chr4 (21-150)||(22800703-22800834)
chr4 (27-148)||(49088921-49089044)
chr4 (28-148)||(14787274-14787396)
chr4 (28-148)||(14789273-14789395)
chr4 (27-148)||(38928024-38928147)
chr4 (6-148)||(22780212-22780354)
chr4 (21-148)||(22802577-22802706)
chr4 (30-148)||(33415334-33415455)
chr4 (6-148)||(44599680-44599819)
chr4 (29-131)||(47210655-47210755)
chr4 (21-149)||(17662091-17662219)
chr4 (6-132)||(18709021-18709145)
chr4 (30-148)||(36921338-36921458)
chr4 (27-148)||(2891657-2891780)
chr4 (30-148)||(37312924-37313044)
chr4 (32-132)||(3824466-3824569)
chr4 (3-148)||(16933988-16934128)
chr4 (30-145)||(36919432-36919549)
chr4 (21-129)||(40637435-40637545)
chr4 (30-148)||(5101284-5101404)
chr4 (30-133)||(47563127-47563231)
chr4 (21-148)||(24889157-24889286)
chr4 (32-148)||(40091259-40091378)
chr4 (21-132)||(52942347-52942460)
chr4 (30-148)||(16453676-16453796)
chr4 (27-132)||(6133202-6133308)
chr4 (27-132)||(27499413-27499519)
chr4 (29-148)||(24446502-24446623)
chr4 (58-149)||(16455624-16455715)
chr4 (60-132)||(18409210-18409281)
chr4 (30-148)||(56030828-56030945)
chr4 (32-127)||(13547524-13547621)
chr4 (30-148)||(36378659-36378777)
chr4 (30-141)||(36380716-36380827)
chr4 (60-148)||(3937126-3937212)
chr4 (28-127)||(48486687-48486787)
chr4 (75-148)||(38269995-38270068)
chr4 (31-148)||(4215672-4215792)
chr4 (27-127)||(12395712-12395813)
chr4 (27-127)||(12400674-12400775)
chr4 (21-77)||(24879351-24879409)
chr4 (162-241)||(44683056-44683134)
chr4 (30-148)||(5664605-5664722)
chr4 (60-142)||(18534689-18534770)
chr4 (95-148)||(19323124-19323177)
chr4 (77-148)||(19096298-19096370)
chr4 (60-132)||(41997887-41997958)
chr4 (30-127)||(47275092-47275190)
chr4 (21-88)||(24880813-24880883)
chr4 (60-141)||(15032401-15032480)
chr4 (95-148)||(8756103-8756156)
chr4 (95-148)||(12102513-12102566)
chr4 (95-132)||(18311233-18311270)
chr4 (77-148)||(619298-619370)
chr4 (60-148)||(18537325-18537412)
[»] chr8 (47 HSPs)
chr8 (3-148)||(27827335-27827479)
chr8 (3-149)||(27829646-27829791)
chr8 (3-148)||(4424368-4424512)
chr8 (3-148)||(32339659-32339803)
chr8 (3-149)||(15809568-15809712)
chr8 (3-148)||(3883436-3883580)
chr8 (3-148)||(18811057-18811202)
chr8 (3-148)||(22684491-22684638)
chr8 (3-149)||(18813231-18813377)
chr8 (3-148)||(28283062-28283206)
chr8 (3-148)||(43530465-43530609)
chr8 (3-148)||(609085-609230)
chr8 (3-130)||(44721193-44721318)
chr8 (11-132)||(3874351-3874470)
chr8 (21-148)||(15073073-15073202)
chr8 (21-148)||(15068343-15068472)
chr8 (13-149)||(24873038-24873175)
chr8 (27-132)||(14808128-14808234)
chr8 (30-133)||(30480364-30480468)
chr8 (27-134)||(36865906-36866014)
chr8 (6-132)||(43082327-43082450)
chr8 (21-148)||(41383025-41383154)
chr8 (30-132)||(13858351-13858452)
chr8 (30-148)||(14419035-14419155)
chr8 (33-132)||(33541272-33541372)
chr8 (6-132)||(43079956-43080079)
chr8 (60-148)||(27106747-27106835)
chr8 (21-132)||(28251428-28251539)
chr8 (60-148)||(2467979-2468066)
chr8 (27-135)||(31162579-31162686)
chr8 (29-148)||(35872301-35872422)
chr8 (21-148)||(41385107-41385233)
chr8 (60-132)||(15185581-15185652)
chr8 (27-127)||(37214131-37214232)
chr8 (29-132)||(5372043-5372148)
chr8 (63-148)||(15956358-15956443)
chr8 (40-148)||(14477630-14477740)
chr8 (27-132)||(27911446-27911550)
chr8 (27-132)||(27957865-27957969)
chr8 (31-148)||(25952891-25953010)
chr8 (85-148)||(183246-183310)
chr8 (60-148)||(21482708-21482798)
chr8 (96-141)||(2467887-2467932)
chr8 (95-148)||(3005486-3005539)
chr8 (27-77)||(181844-181896)
chr8 (96-148)||(2467781-2467833)
chr8 (60-148)||(21480900-21480990)
[»] chr5 (68 HSPs)
chr5 (3-148)||(34476894-34477038)
chr5 (3-148)||(34479259-34479403)
chr5 (11-149)||(38882390-38882526)
chr5 (3-133)||(10528954-10529083)
chr5 (3-149)||(21684293-21684437)
chr5 (3-130)||(25921333-25921458)
chr5 (6-148)||(25804321-25804463)
chr5 (6-148)||(10749997-10750137)
chr5 (6-148)||(10757473-10757613)
chr5 (3-148)||(18469303-18469448)
chr5 (3-148)||(4236922-4237065)
chr5 (3-148)||(18466978-18467123)
chr5 (11-128)||(2175203-2175318)
chr5 (21-148)||(3372977-3373104)
chr5 (11-148)||(10587117-10587252)
chr5 (3-132)||(27912830-27912958)
chr5 (3-148)||(31179213-31179358)
chr5 (21-149)||(39854791-39854922)
chr5 (21-148)||(36402170-36402300)
chr5 (11-148)||(39798332-39798468)
chr5 (30-132)||(40221843-40221946)
chr5 (27-132)||(21289070-21289176)
chr5 (21-148)||(18511056-18511185)
chr5 (21-140)||(2818186-2818307)
chr5 (3-148)||(4410316-4410458)
chr5 (21-148)||(6745375-6745507)
chr5 (27-148)||(41585580-41585703)
chr5 (21-132)||(16776466-16776577)
chr5 (27-149)||(38959971-38960092)
chr5 (30-149)||(658203-658323)
chr5 (30-133)||(17818351-17818455)
chr5 (11-148)||(27910735-27910872)
chr5 (30-132)||(2724207-2724310)
chr5 (32-144)||(21948348-21948464)
chr5 (21-148)||(6747611-6747743)
chr5 (30-148)||(26098129-26098251)
chr5 (30-148)||(31465833-31465954)
chr5 (32-132)||(15354431-15354530)
chr5 (32-132)||(15356707-15356806)
chr5 (32-132)||(23665368-23665467)
chr5 (32-132)||(23741714-23741813)
chr5 (32-132)||(23793120-23793219)
chr5 (31-148)||(1189454-1189571)
chr5 (21-126)||(17073192-17073298)
chr5 (27-148)||(20505687-20505813)
chr5 (22-130)||(31543047-31543153)
chr5 (27-148)||(36208884-36209007)
chr5 (27-128)||(12555779-12555881)
chr5 (30-148)||(34530559-34530679)
chr5 (30-133)||(37705643-37705747)
chr5 (27-148)||(24127167-24127291)
chr5 (21-110)||(18509201-18509291)
chr5 (27-124)||(20045297-20045395)
chr5 (30-111)||(26098045-26098127)
chr5 (30-125)||(16092069-16092164)
chr5 (28-133)||(696187-696293)
chr5 (30-147)||(6756806-6756926)
chr5 (33-132)||(10474185-10474285)
chr5 (6-132)||(15552543-15552667)
chr5 (30-148)||(18596959-18597079)
chr5 (30-127)||(2954728-2954827)
chr5 (30-148)||(25904417-25904536)
chr5 (30-127)||(20043303-20043402)
chr5 (6-130)||(31545381-31545502)
chr5 (33-114)||(23667644-23667725)
chr5 (27-147)||(6661038-6661156)
chr5 (63-149)||(20054182-20054267)
chr5 (30-131)||(39397875-39397970)
[»] chr3 (90 HSPs)
chr3 (3-148)||(1321753-1321897)
chr3 (3-148)||(11168375-11168519)
chr3 (3-148)||(10955867-10956010)
chr3 (3-146)||(5191925-5192066)
chr3 (3-149)||(10084228-10084372)
chr3 (3-149)||(10191151-10191295)
chr3 (3-148)||(10958163-10958306)
chr3 (3-131)||(38890314-38890441)
chr3 (3-148)||(51726847-51726990)
chr3 (3-148)||(5522466-5522610)
chr3 (11-148)||(25533707-25533842)
chr3 (5-148)||(38210647-38210789)
chr3 (21-148)||(42990591-42990717)
chr3 (6-148)||(456185-456325)
chr3 (6-148)||(458562-458702)
chr3 (7-148)||(6065633-6065774)
chr3 (11-148)||(7606443-7606580)
chr3 (6-133)||(53893909-53894036)
chr3 (6-148)||(747035-747177)
chr3 (27-148)||(1313698-1313822)
chr3 (29-148)||(11170670-11170788)
chr3 (21-148)||(18096740-18096870)
chr3 (21-148)||(18099010-18099140)
chr3 (3-153)||(4103731-4103879)
chr3 (3-148)||(22114143-22114288)
chr3 (21-132)||(32219372-32219485)
chr3 (6-148)||(10621366-10621509)
chr3 (21-149)||(53915337-53915467)
chr3 (3-132)||(25389179-25389308)
chr3 (6-148)||(50494277-50494417)
chr3 (21-148)||(53917506-53917635)
chr3 (30-148)||(43423308-43423428)
chr3 (27-148)||(41849351-41849470)
chr3 (21-148)||(36012114-36012243)
chr3 (30-148)||(3314979-3315100)
chr3 (11-128)||(3859792-3859908)
chr3 (7-148)||(6063283-6063424)
chr3 (30-133)||(27635514-27635618)
chr3 (32-149)||(24980007-24980127)
chr3 (30-148)||(45883237-45883357)
chr3 (21-131)||(43228578-43228687)
chr3 (30-148)||(43421260-43421380)
chr3 (27-132)||(12267836-12267942)
chr3 (3-111)||(26720821-26720928)
chr3 (6-148)||(28412870-28413010)
chr3 (33-148)||(43226381-43226495)
chr3 (30-120)||(51943667-51943758)
chr3 (21-148)||(4308122-4308251)
chr3 (31-132)||(18162960-18163063)
chr3 (27-148)||(1626525-1626649)
chr3 (30-132)||(6484652-6484756)
chr3 (30-128)||(25688021-25688121)
chr3 (30-132)||(28181298-28181400)
chr3 (30-148)||(28101848-28101965)
chr3 (11-82)||(35919035-35919107)
chr3 (28-132)||(5886496-5886599)
chr3 (28-132)||(5899969-5900072)
chr3 (21-149)||(9604446-9604575)
chr3 (30-132)||(32263898-32264001)
chr3 (30-132)||(880313-880416)
chr3 (30-149)||(3307054-3307177)
chr3 (21-148)||(42992673-42992799)
chr3 (27-149)||(15781170-15781294)
chr3 (27-142)||(5926615-5926731)
chr3 (28-129)||(27101043-27101144)
chr3 (30-125)||(39715760-39715858)
chr3 (29-146)||(47701522-47701638)
chr3 (30-133)||(51674625-51674729)
chr3 (32-133)||(53468312-53468414)
chr3 (27-145)||(880087-880208)
chr3 (54-148)||(53591503-53591597)
chr3 (99-148)||(6232159-6232208)
chr3 (27-122)||(48361538-48361634)
chr3 (27-149)||(47148744-47148861)
chr3 (28-148)||(54691417-54691538)
chr3 (75-149)||(17795595-17795670)
chr3 (75-149)||(19104035-19104110)
chr3 (30-135)||(561637-561739)
chr3 (27-148)||(28761287-28761407)
chr3 (21-55)||(42992557-42992591)
chr3 (30-132)||(4666808-4666911)
chr3 (60-148)||(31151667-31151754)
chr3 (97-133)||(29897544-29897580)
chr3 (97-133)||(29913821-29913857)
chr3 (96-148)||(53597592-53597644)
chr3 (30-148)||(23633745-23633862)
chr3 (91-142)||(36957663-36957713)
chr3 (95-148)||(25635736-25635788)
chr3 (100-148)||(14634291-14634339)
chr3 (96-148)||(21702908-21702960)
[»] chr7 (70 HSPs)
chr7 (3-148)||(7094301-7094445)
chr7 (3-148)||(48457957-48458100)
chr7 (3-148)||(38394290-38394434)
chr7 (3-148)||(7092054-7092198)
chr7 (3-149)||(44868-45013)
chr7 (3-148)||(7471821-7471965)
chr7 (3-148)||(11759431-11759575)
chr7 (3-127)||(18345845-18345967)
chr7 (3-148)||(20297666-20297810)
chr7 (3-147)||(28487857-28488000)
chr7 (3-132)||(40836601-40836728)
chr7 (3-131)||(35933-36059)
chr7 (3-149)||(43253357-43253502)
chr7 (3-148)||(25542832-25542976)
chr7 (3-132)||(20299764-20299891)
chr7 (1-148)||(28485867-28486013)
chr7 (3-146)||(38396938-38397084)
chr7 (4-131)||(3036029-3036154)
chr7 (3-131)||(1850285-1850411)
chr7 (3-148)||(7469864-7470007)
chr7 (6-149)||(2935576-2935717)
chr7 (6-148)||(1606687-1606827)
chr7 (3-148)||(3878881-3879027)
chr7 (21-148)||(13099317-13099446)
chr7 (3-148)||(40946632-40946777)
chr7 (21-148)||(27306076-27306205)
chr7 (6-132)||(7351509-7351633)
chr7 (15-148)||(9027034-9027166)
chr7 (27-148)||(44724898-44725022)
chr7 (28-148)||(26804833-26804955)
chr7 (28-132)||(11355581-11355687)
chr7 (30-149)||(42330845-42330966)
chr7 (30-128)||(443922-444021)
chr7 (32-148)||(4295781-4295899)
chr7 (27-148)||(31434892-31435016)
chr7 (30-127)||(9679383-9679482)
chr7 (32-132)||(40550161-40550260)
chr7 (27-128)||(37411988-37412090)
chr7 (30-148)||(21678386-21678506)
chr7 (27-149)||(21680349-21680473)
chr7 (3-132)||(1046775-1046909)
chr7 (30-124)||(21990474-21990570)
chr7 (21-148)||(20626355-20626481)
chr7 (21-148)||(20630246-20630372)
chr7 (21-148)||(20642665-20642791)
chr7 (32-132)||(22137411-22137510)
chr7 (30-127)||(22251452-22251550)
chr7 (32-132)||(40552438-40552537)
chr7 (3-148)||(1049129-1049280)
chr7 (6-132)||(7349135-7349258)
chr7 (29-148)||(42223479-42223600)
chr7 (32-127)||(9681146-9681243)
chr7 (32-114)||(22108401-22108483)
chr7 (8-103)||(31155811-31155908)
chr7 (60-133)||(24748946-24749018)
chr7 (30-149)||(21591988-21592108)
chr7 (27-124)||(39145856-39145954)
chr7 (30-148)||(24465857-24465975)
chr7 (95-148)||(1502816-1502868)
chr7 (30-148)||(27832488-27832606)
chr7 (30-132)||(7188861-7188961)
chr7 (75-132)||(20137009-20137066)
chr7 (95-148)||(24817203-24817256)
chr7 (96-133)||(25357324-25357361)
chr7 (27-132)||(26295765-26295868)
chr7 (27-125)||(22394042-22394137)
chr7 (99-148)||(31153691-31153740)
chr7 (99-148)||(16104631-16104680)
chr7 (95-148)||(24813348-24813401)
chr7 (96-133)||(25410411-25410448)
[»] chr1 (77 HSPs)
chr1 (3-148)||(20291750-20291894)
chr1 (3-148)||(51750333-51750476)
chr1 (3-149)||(15294677-15294821)
chr1 (3-148)||(13447117-13447260)
chr1 (3-148)||(10399669-10399815)
chr1 (3-148)||(13762130-13762275)
chr1 (3-148)||(13358867-13359011)
chr1 (11-148)||(20302743-20302879)
chr1 (21-148)||(2617829-2617955)
chr1 (3-148)||(31735365-31735508)
chr1 (6-132)||(47177659-47177784)
chr1 (3-149)||(39932368-39932515)
chr1 (3-148)||(46431548-46431693)
chr1 (6-132)||(47180010-47180135)
chr1 (3-148)||(28842788-28842931)
chr1 (6-148)||(16226465-16226607)
chr1 (6-149)||(16231860-16232003)
chr1 (21-148)||(6995540-6995669)
chr1 (3-148)||(51757824-51757973)
chr1 (8-149)||(9459276-9459416)
chr1 (8-149)||(9463103-9463243)
chr1 (6-148)||(23786137-23786278)
chr1 (27-132)||(25251138-25251244)
chr1 (21-148)||(39462826-39462956)
chr1 (27-148)||(50078635-50078759)
chr1 (21-132)||(27336801-27336914)
chr1 (3-148)||(51752657-51752805)
chr1 (6-148)||(24325960-24326101)
chr1 (21-148)||(28206912-28207042)
chr1 (21-148)||(50307389-50307519)
chr1 (30-148)||(2949079-2949199)
chr1 (21-132)||(27338992-27339105)
chr1 (27-132)||(12302368-12302475)
chr1 (11-134)||(2510200-2510321)
chr1 (27-148)||(4131221-4131345)
chr1 (3-114)||(28840973-28841083)
chr1 (21-148)||(23816195-23816323)
chr1 (21-148)||(47906576-47906704)
chr1 (30-148)||(3579431-3579550)
chr1 (27-148)||(14097815-14097939)
chr1 (30-155)||(18839902-18840029)
chr1 (30-127)||(13215398-13215496)
chr1 (21-134)||(25860268-25860378)
chr1 (28-148)||(47451943-47452065)
chr1 (27-150)||(50248415-50248540)
chr1 (28-132)||(15823861-15823967)
chr1 (30-132)||(9240951-9241054)
chr1 (30-148)||(31424862-31424982)
chr1 (30-132)||(11457339-11457442)
chr1 (30-148)||(25248398-25248518)
chr1 (27-127)||(28998116-28998220)
chr1 (27-127)||(29003832-29003936)
chr1 (30-148)||(31490226-31490345)
chr1 (30-125)||(17324388-17324484)
chr1 (30-148)||(18307423-18307543)
chr1 (29-127)||(38925350-38925451)
chr1 (60-148)||(16429299-16429387)
chr1 (60-132)||(17185996-17186067)
chr1 (31-151)||(30780361-30780485)
chr1 (30-148)||(41647234-41647355)
chr1 (32-148)||(17319203-17319321)
chr1 (30-148)||(31422706-31422827)
chr1 (54-142)||(17324484-17324573)
chr1 (27-142)||(18800429-18800543)
chr1 (32-149)||(15916706-15916822)
chr1 (27-149)||(40134255-40134379)
chr1 (27-148)||(14183455-14183574)
chr1 (60-148)||(30790250-30790337)
chr1 (95-132)||(16432767-16432804)
chr1 (67-142)||(25128225-25128301)
chr1 (95-149)||(28279642-28279696)
chr1 (27-132)||(6114970-6115074)
chr1 (96-133)||(21353214-21353251)
chr1 (27-77)||(50076591-50076643)
chr1 (96-132)||(10116147-10116183)
chr1 (99-135)||(16561845-16561881)
chr1 (60-142)||(26519295-26519373)
[»] chr2 (44 HSPs)
chr2 (3-142)||(23452084-23452222)
chr2 (3-145)||(27105067-27105209)
chr2 (3-128)||(13909907-13910030)
chr2 (11-146)||(45279844-45279978)
chr2 (26-151)||(17849403-17849531)
chr2 (3-129)||(24162084-24162208)
chr2 (32-148)||(19501843-19501958)
chr2 (11-114)||(42064776-42064878)
chr2 (34-148)||(19504178-19504291)
chr2 (27-132)||(19007927-19008033)
chr2 (10-148)||(36558721-36558859)
chr2 (6-148)||(45332020-45332162)
chr2 (21-148)||(21520534-21520664)
chr2 (6-132)||(35217827-35217950)
chr2 (6-148)||(36560981-36561122)
chr2 (30-150)||(28459036-28459157)
chr2 (27-127)||(42923373-42923475)
chr2 (6-132)||(35215450-35215573)
chr2 (30-132)||(28196925-28197028)
chr2 (30-148)||(22287181-22287301)
chr2 (21-148)||(43623423-43623553)
chr2 (27-129)||(3022459-3022562)
chr2 (39-148)||(11739421-11739532)
chr2 (21-133)||(7462806-7462919)
chr2 (30-132)||(38020370-38020473)
chr2 (27-149)||(22162868-22162992)
chr2 (27-148)||(6263993-6264116)
chr2 (30-149)||(14837558-14837680)
chr2 (27-128)||(15539396-15539497)
chr2 (54-148)||(42453798-42453890)
chr2 (30-124)||(6258687-6258782)
chr2 (60-148)||(22874431-22874519)
chr2 (32-121)||(5375218-5375308)
chr2 (30-148)||(22707595-22707716)
chr2 (75-148)||(45238842-45238916)
chr2 (30-127)||(34979456-34979554)
chr2 (30-102)||(22407346-22407419)
chr2 (11-56)||(42453041-42453086)
chr2 (95-127)||(42923315-42923347)
chr2 (27-132)||(11577975-11578077)
chr2 (96-133)||(17943813-17943850)
chr2 (54-114)||(17848754-17848814)
chr2 (60-132)||(20592395-20592466)
chr2 (94-126)||(23871173-23871205)
[»] chr6 (48 HSPs)
chr6 (3-148)||(14507018-14507161)
chr6 (3-148)||(2628727-2628871)
chr6 (3-148)||(28241163-28241306)
chr6 (6-149)||(33311458-33311599)
chr6 (6-148)||(33309189-33309329)
chr6 (3-148)||(30967530-30967673)
chr6 (3-131)||(19704422-19704552)
chr6 (3-132)||(4816088-4816216)
chr6 (3-148)||(14458607-14458752)
chr6 (3-148)||(1230090-1230234)
chr6 (6-132)||(5273073-5273197)
chr6 (21-148)||(9020269-9020398)
chr6 (6-148)||(12195354-12195496)
chr6 (6-149)||(29754548-29754690)
chr6 (30-132)||(30728686-30728789)
chr6 (6-148)||(26065961-26066102)
chr6 (6-148)||(26068235-26068376)
chr6 (3-132)||(20915214-20915342)
chr6 (27-148)||(24338295-24338418)
chr6 (1-148)||(30034447-30034590)
chr6 (6-132)||(26932420-26932545)
chr6 (30-148)||(3394716-3394837)
chr6 (21-148)||(11982872-11983000)
chr6 (32-148)||(15367380-15367498)
chr6 (28-132)||(15346691-15346796)
chr6 (15-132)||(26065320-26065438)
chr6 (15-132)||(26085289-26085407)
chr6 (27-148)||(3629711-3629835)
chr6 (30-148)||(3631784-3631904)
chr6 (75-148)||(15540990-15541064)
chr6 (63-148)||(18322482-18322566)
chr6 (21-148)||(3233567-3233697)
chr6 (28-128)||(15530027-15530129)
chr6 (30-124)||(1069588-1069683)
chr6 (77-148)||(13057587-13057659)
chr6 (75-148)||(8717195-8717268)
chr6 (91-148)||(13040174-13040232)
chr6 (92-133)||(10584355-10584396)
chr6 (96-149)||(22611086-22611139)
chr6 (75-132)||(14466717-14466774)
chr6 (32-148)||(17012387-17012502)
chr6 (75-132)||(22491005-22491062)
chr6 (30-148)||(25480227-25480346)
chr6 (96-148)||(6610362-6610414)
chr6 (60-142)||(15720020-15720099)
chr6 (96-148)||(25465444-25465496)
chr6 (96-134)||(19696851-19696889)
chr6 (96-132)||(28078064-28078100)
[»] scaffold0068 (1 HSPs)
scaffold0068 (3-149)||(29473-29617)
[»] scaffold0038 (1 HSPs)
scaffold0038 (3-148)||(41325-41468)
[»] scaffold0025 (1 HSPs)
scaffold0025 (3-149)||(69132-69277)
[»] scaffold0005 (3 HSPs)
scaffold0005 (3-149)||(183481-183626)
scaffold0005 (28-148)||(50335-50457)
scaffold0005 (28-148)||(52334-52456)
[»] scaffold0267 (1 HSPs)
scaffold0267 (8-131)||(332-455)
[»] scaffold1674 (1 HSPs)
scaffold1674 (6-132)||(1309-1433)
[»] scaffold0370 (1 HSPs)
scaffold0370 (3-132)||(1310-1438)
[»] scaffold0011 (1 HSPs)
scaffold0011 (21-146)||(35909-36037)
[»] scaffold0472 (1 HSPs)
scaffold0472 (6-148)||(6506-6646)
[»] scaffold0031 (1 HSPs)
scaffold0031 (28-148)||(79508-79631)
[»] scaffold0250 (1 HSPs)
scaffold0250 (3-142)||(3182-3319)
[»] scaffold0131 (2 HSPs)
scaffold0131 (30-148)||(14231-14349)
scaffold0131 (103-132)||(15393-15422)
[»] scaffold0891 (1 HSPs)
scaffold0891 (15-132)||(4535-4650)
[»] scaffold0045 (1 HSPs)
scaffold0045 (27-146)||(85549-85671)
[»] scaffold0004 (1 HSPs)
scaffold0004 (21-148)||(80175-80305)
[»] scaffold0140 (2 HSPs)
scaffold0140 (32-132)||(24723-24822)
scaffold0140 (32-132)||(22448-22547)
[»] scaffold0127 (1 HSPs)
scaffold0127 (21-148)||(12715-12841)
[»] scaffold0154 (1 HSPs)
scaffold0154 (21-147)||(11315-11445)
[»] scaffold0468 (1 HSPs)
scaffold0468 (29-148)||(1493-1609)
[»] scaffold0339 (1 HSPs)
scaffold0339 (30-127)||(4317-4415)
[»] scaffold0256 (1 HSPs)
scaffold0256 (96-148)||(16605-16656)
[»] scaffold1899 (1 HSPs)
scaffold1899 (95-132)||(9-45)


Alignment Details
Target: chr4 (Bit Score: 184; Significance: 2e-99; HSPs: 85)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 149 - 347
Target Start/End: Original strand, 44692758 - 44692954
Alignment:
Q  149 ggaattaactcttgtttgttttgtttctttgaggtccaatagttggtcatgctatgatatggatcacattatctttcattatatcaactcaactttttat 248  Q
    |||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44692758 ggaattaactc--gtttgttttgcttctttgaggtccaatagttggtcatgctatgatatggatcacattatctttcattatatcaactcaactttttat 44692855  T
Q  249 tctatgacttatgtatagatattgaatgaatcataacttctgtgtcaaatacttatttatagtttatcatgtttcattacctagtgctatgtgccaaat 347  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44692856 tctatgacttatgtatagatattgaatgaatcataacttctgtgtcaaatacttatttatagtttatcatgtttcattacctagtgctatgtgccaaat 44692954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 37089357 - 37089211
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  |||| |||||||    
T  37089357 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatccattgctcc 37089259  T
Q  103 acacatcaagtttgttattggtgtga-ttttcatagaattcgcaacag 149  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  37089258 acacatcaagtttgttattggtgtgatttttcatcgaattcgcaacag 37089211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 5635461 - 5635317
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||  ||||||||||||    
T  5635461 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgattgattatcccttgctcc 5635363  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaacag 149  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||    
T  5635362 acacatcaag-ttgttattggtgtgattttcatcgaattcgcaacag 5635317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 2484858 - 2484714
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||  ||||||||||||    
T  2484858 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacacttt-attttggttgcttgattatcccttgctcc 2484760  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaacag 149  Q
    |||||||||| |||||||||||||||||||||| |||||| ||||||    
T  2484759 acacatcaag-ttgttattggtgtgattttcatcgaattcacaacag 2484714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 3 - 151
Target Start/End: Complemental strand, 31849584 - 31849437
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctc 101  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||| |||||||    
T  31849584 ttctcttctttgtgttcttctcgccgttgtttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgctc 31849486  T
Q  102 cacacatcaagtttgttattggtgtgattttcatagaattcgcaacagga 151  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  31849485 cacacatcaag-ttgttattggtgtgattttcatcgaattcgcaacagga 31849437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 8631404 - 8631260
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctc 101  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||| |||||  |||||||||||    
T  8631404 ttctcttctttgtgttcttctcgccgttgtttttctacttttggcttgtatttaattgttccatacactttg-ttttagttgcttgattatcccttgctc 8631306  T
Q  102 cacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||    
T  8631305 cacacatcaag-ttgttattggtgtgattttcatcgaattcgcaaca 8631260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 9176461 - 9176315
Alignment:
Q  1 tattctcttctttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgc 99  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||| |||||  |||||||||    
T  9176461 tattctcttctttgtgttcttctcgccgttgtttttctacttttggcttgtatttaattattccatacactttg-ttttggttgcttgattatcccttgc 9176363  T
Q  100 tccacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    ||||||||||||| |||||||||||||||||||| | ||||||||||||    
T  9176362 tccacacatcaag-ttgttattggtgtgattttcgtcgaattcgcaaca 9176315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 47868747 - 47868894
Alignment:
Q  1 tattctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgct 100  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| | |||  ||||||||||    
T  47868747 tattctcttctttgtgttcttctcaccgttgttttctacttttggcttgtattttattgttccatacactttgattttggttgcctgattatcccttgct 47868846  T
Q  101 ccacacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||||| ||||||||||||||| ||||||| ||||||||||||    
T  47868847 ccacacatcaag-ttgttattggtgtgatttttcatcgaattcgcaaca 47868894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 11435302 - 11435430
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    |||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||| ||||||||    
T  11435302 ttctcttccttgtgttcttctcgccattgttttctacttttggcttgtatttaattgttccatacactttgtttttggttgcttgattatctcttgctcc 11435401  T
Q  103 acacatcaagtttgttattggtgtgatttt 132  Q
    |||||||||| |||||||||||||||||||    
T  11435402 acacatcaag-ttgttattggtgtgatttt 11435430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 24348557 - 24348692
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatca 110  Q
    ||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||| |||||  ||||||||||||||||||||    
T  24348557 tttgtgttcttctcgccgttgttttctatttttggcttgtatttagttgttccatacactttg-ttttggttgcttgattatcccttgctccacacatca 24348655  T
Q  111 agtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    || |||||||||||||||||||||| ||||||||||||    
T  24348656 ag-ttgttattggtgtgattttcatcgaattcgcaaca 24348692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 51015593 - 51015720
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||||||||||||    
T  51015593 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatcccttgctcc 51015691  T
Q  103 acacatcaagtttgttattggtgtgatttt 132  Q
    |||||||||| |||||||||||||| ||||    
T  51015692 acacatcaag-ttgttattggtgtgttttt 51015720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 9174131 - 9173987
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctc 101  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| || ||||||||||| |||||||| |||||  |||||||||||    
T  9174131 ttctcttctttgtgttcttctcgccgttgtttttctacttttggcttgtatttaattatttcatacactttg-ttttggttgcttgattatcccttgctc 9174033  T
Q  102 cacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    ||||||||||| |||||||| ||||||||||||| ||||||||||||    
T  9174032 cacacatcaag-ttgttattagtgtgattttcatcgaattcgcaaca 9173987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 11437710 - 11437855
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||  ||| ||||||||    
T  11437710 ttctcttccttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggctgcttgattatctcttgctcc 11437809  T
Q  103 acacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    | |||||||| ||||||||||||||| ||||||| |||||| |||||    
T  11437810 atacatcaag-ttgttattggtgtgatttttcatcgaattcacaaca 11437855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 22132376 - 22132248
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttc--tacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgct 100  Q
    ||||||||||||||||| |||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||    
T  22132376 ttctcttctttgtgttcttctcgccgttgtttttcttacttttggcttgtatttaattgttccatacactttgtttttggttgcttgattatcccttgct 22132277  T
Q  101 ccacacatcaagtttgttattggtgtgatt 130  Q
    |||||||||||| |||||||||||||||||    
T  22132276 ccacacatcaag-ttgttattggtgtgatt 22132248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 6 - 151
Target Start/End: Original strand, 7941674 - 7941817
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||||||||| ||||||| |||||||||||||||| ||||||||| |||||||||||||||||| |||||||| ||| |  |||||||||||||||    
T  7941674 tcttctttgtgttcttctcgccattgttttctacttttgccttgtatttcattgttccatacactttg-ttttggttgcttaattatcccttgctccaca 7941772  T
Q  106 catcaagtttgttattggtgtgattttcatagaattcgcaacagga 151  Q
    ||||||| ||||| |||||||||||||||| |||||||||||||||    
T  7941773 catcaag-ttgttgttggtgtgattttcatcgaattcgcaacagga 7941817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 26085962 - 26085818
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||    || ||||||||||| |||||||| |||||| ||||||||||||    
T  26085962 ttctcttctttgtgtttttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgattttggttgcttgactatcccttgctcc 26085863  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||||| ||||||||||||||||| |||| ||||||||||||    
T  26085862 acacatcaag-ttgttattggtgtgattctcatcgaattcgcaaca 26085818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 14633666 - 14633811
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||| |||||  ||| ||||||||    
T  14633666 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacattttg-tttcggttgcttgattatctcttgctcc 14633764  T
Q  103 acacatcaagtttgttattggtgtgattt-tcatagaattcgcaacag 149  Q
    |||||||||| |||||||||||||||||| |||| ||||||| |||||    
T  14633765 acacatcaag-ttgttattggtgtgatttctcatcgaattcggaacag 14633811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 22044376 - 22044249
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||  ||||||||||||    
T  22044376 ttctcttctttttgttcttctcgccgttgttttctacttttggcttgtatttaattgtttcatacactttg-ttttggttgcttgattatcccttgctcc 22044278  T
Q  103 acacatcaagtttgttattggtgtgatttt 132  Q
    |||||||||| ||||||||||||| |||||    
T  22044277 acacatcaag-ttgttattggtgttatttt 22044249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 22046671 - 22046544
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||| ||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||  ||||||||||||    
T  22046671 ttctcttctttttgttcttctcgtcgttgttttctacttttgacttgtatttaattgttccatacactttg-ttttggttgcttgattatcccttgctcc 22046573  T
Q  103 acacatcaagtttgttattggtgtgatttt 132  Q
    |||||||||| |||||||||||||||||||    
T  22046572 acacatcaag-ttgttattggtgtgatttt 22046544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 3 - 133
Target Start/End: Complemental strand, 11008553 - 11008424
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctc 101  Q
    ||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| |||||  |||||||||||    
T  11008553 ttctcttctttgtgttcttctcgccgttgtttttctactttttgcttgtatttaattgttccatacactttg-ttttggttgcttgattatcccttgctc 11008455  T
Q  102 cacacatcaagtttgttattggtgtgattttc 133  Q
    ||||||||||| |||||||||||||| |||||    
T  11008454 cacacatcaag-ttgttattggtgtgtttttc 11008424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 5198759 - 5198895
Alignment:
Q  11 tttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatc 109  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||  |||| ||||||||||||||    
T  5198759 tttgtgttcttctcgccgttgtttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatccattgctccacacatc 5198857  T
Q  110 aagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    ||| || ||||||||||||||||||| |||||| |||||    
T  5198858 aag-ttattattggtgtgattttcatcgaattcacaaca 5198895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 3 - 133
Target Start/End: Original strand, 38409552 - 38409680
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||| |||||  ||||||||||||    
T  38409552 ttctcttctttttgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacaatttg-ttttagttgcttgattatcccttgctcc 38409650  T
Q  103 acacatcaagtttgttattggtgtgattttc 133  Q
    |||||||||| |||||||||||||| |||||    
T  38409651 acacatcaag-ttgttattggtgtgtttttc 38409680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 18847500 - 18847627
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctac-ttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctc 101  Q
    |||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||  ||||||| |||||  |||||||||||    
T  18847500 ttctgttctttgtgttcttctcgccgttgttttctactttttggcttgtatttaattattccatacactttg--tttggttgcttgattatcccttgctc 18847597  T
Q  102 cacacatcaagtttgttattggtgtgatttt 132  Q
    ||||||||||| |||||||||||||||||||    
T  18847598 cacacatcaag-ttgttattggtgtgatttt 18847627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 9148591 - 9148727
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatca 110  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||| |||| |||||||||||    
T  9148591 tttgtgttcttctcaccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgttccacacatca 9148689  T
Q  111 agtttgttattggtgtgattt-tcatagaattcgcaaca 148  Q
    || |||||||||||||| ||| |||| ||||||||||||    
T  9148690 ag-ttgttattggtgtgttttctcatcgaattcgcaaca 9148727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 22134603 - 22134476
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttc--tacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgct 100  Q
    ||||||||||||||||| |||||||||||||||   ||||||||||||||||||||||||||||||||||||| ||||||||  ||||  ||||||||||    
T  22134603 ttctcttctttgtgttcttctcgccgttgtttttcttacttttggcttgtatttaattgttccatacactttg-ttttggttgtttgattatcccttgct 22134505  T
Q  101 ccacacatcaagtttgttattggtgtgatt 130  Q
    |||||||||||| |||||||||||||||||    
T  22134504 ccacacatcaag-ttgttattggtgtgatt 22134476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 53405481 - 53405626
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| | |||||| ||||||||||||||||||||||||||    ||||||||| |||||||| |||| |||||  ||||||||||||    
T  53405481 ttctcttctttgtgttcttttcgccgatgttttctacttttggcttgtatttataacttccatacattttgtttt-ggttgcttgattatcccttgctcc 53405579  T
Q  103 acacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    ||||||||||||| |||||||||||| ||||||| ||||||||||||    
T  53405580 acacatcaagtttattattggtgtgatttttcatcgaattcgcaaca 53405626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 6765192 - 6765336
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    |||||||||| |||||| |||||||||||||||||||||| |||||||||||| |  |||||||||||||||||| |||| |||||  ||||||| ||||    
T  6765192 ttctcttcttggtgttcttctcgccgttgttttctacttt-ggcttgtattta-taattccatacactttgtttt-ggttgcttgattatcccttactcc 6765288  T
Q  103 acacatcaagtttgttattggtgtga-ttttcatagaattcgcaacag 149  Q
    |||||||||||||||||||||||||| ||||||| |||||| ||||||    
T  6765289 acacatcaagtttgttattggtgtgatttttcatcgaattcacaacag 6765336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 11 - 133
Target Start/End: Complemental strand, 11006231 - 11006110
Alignment:
Q  11 tttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatc 109  Q
    ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| |||||  |||||||||||||||||||    
T  11006231 tttgtgttcttctcgccgttgtttttctactttttgcttgtatttaattgttccatacactttg-ttttggttgcttgattatcccttgctccacacatc 11006133  T
Q  110 aagtttgttattggtgtgattttc 133  Q
    ||| |||||||||||||| |||||    
T  11006132 aag-ttgttattggtgtgtttttc 11006110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 22782719 - 22782577
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    || ||||| |||||||||||||| ||| |  |||||||||||||||    
T  22782719 tcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacgctttgtttttggttgcttaattatcccttgctccaca 22782620  T
Q  106 catcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    ||||||| ||||||||||||||| ||||| | ||||||||||||    
T  22782619 catcaag-ttgttattggtgtgatttttcgtcgaattcgcaaca 22782577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 16931774 - 16931631
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||| ||| |  ||||||||||||    
T  16931774 ttctcttcttt-tgttcttctcgccgttgttttctacttttggcttgtatttaattattccatacgctttg-ttttggttgcttaattatcccttgctcc 16931677  T
Q  103 acacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||| ||| ||||||||||||||| ||||||| |||||| |||||    
T  16931676 acacattaag-ttgttattggtgtgatttttcatcgaattcacaaca 16931631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 21 - 150
Target Start/End: Complemental strand, 22800834 - 22800703
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| |||| |||||||||||||||||| ||||  ||||||||||| |||||||||| |||| |||||| |||||||||||| |||||||||||||||    
T  22800834 tctcgctgttgctttctacttttggcttgtgtttataattgttccatatactttgtttt-ggttgcttgactatcccttgctccccacatcaagtttgtt 22800736  T
Q  119 attggtgtga-ttttcatagaattcgcaacagg 150  Q
    |||||||||| ||||||| ||||||||||||||    
T  22800735 attggtgtgatttttcatcgaattcgcaacagg 22800703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 49088921 - 49089044
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||| ||||||| ||| ||||||||||||||||||||||    
T  49088921 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgactatcccttactcaacacatcaagtttgttattggt 49089019  T
Q  125 gtga-ttttcatagaattcgcaaca 148  Q
    |||| ||||||| ||||||||||||    
T  49089020 gtgatttttcatcgaattcgcaaca 49089044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 14787396 - 14787274
Alignment:
Q  28 gttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtg 125  Q
    ||||||||||||||||||||||| ||||  |||||| ||||||||||||||| |||| |||||  |||||||||||||||||||||||||||||||||||    
T  14787396 gttgttttctacttttggcttgtgtttataattgtttcatacactttgtttt-ggttgcttgattatcccttgctccacacatcaagtttgttattggtg 14787298  T
Q  126 tga-ttttcatagaattcgcaaca 148  Q
    ||| ||||||| ||||||||||||    
T  14787297 tgatttttcatcgaattcgcaaca 14787274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 14789395 - 14789273
Alignment:
Q  28 gttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtg 125  Q
    ||||||||||||||||||||||| ||||  |||||| ||||||||||||||| |||| |||||  |||||||||||||||||||||||||||||||||||    
T  14789395 gttgttttctacttttggcttgtgtttataattgtttcatacactttgtttt-ggttgcttgattatcccttgctccacacatcaagtttgttattggtg 14789297  T
Q  126 tga-ttttcatagaattcgcaaca 148  Q
    ||| ||||||| ||||||||||||    
T  14789296 tgatttttcatcgaattcgcaaca 14789273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 38928147 - 38928024
Alignment:
Q  27 cgttgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||||||||||| ||| ||| |||||||||||||||||||| |||| |||||  ||||||||||||||||||||||||||||||||||    
T  38928147 cgttgttttctacttttggcttgtgattataactgttccatacactttgtttt-ggttgcttgattatcccttgctccacacatcaagtttgttattggt 38928049  T
Q  125 gtga-ttttcatagaattcgcaaca 148  Q
    |||| ||||||| ||||||||||||    
T  38928048 gtgatttttcatcgaattcgcaaca 38928024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 22780354 - 22780212
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||    ||  |||| |||||||||||||| ||| |  |||||||||||||||    
T  22780354 tcttctttgtgttcttctcgccgttgttttctacttttggcttatatttataactttgatacgctttgtttttggttgcttaattatcccttgctccaca 22780255  T
Q  106 catcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    ||||||| ||||||||||||||| ||||||| ||||||||||||    
T  22780254 catcaag-ttgttattggtgtgatttttcatcgaattcgcaaca 22780212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 148
Target Start/End: Complemental strand, 22802706 - 22802577
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| |||| |||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||  ||||||||||||||||||||||||||||    
T  22802706 tctcgctgttgctttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgattatcccttgctccacacatcaagtttgtt 22802608  T
Q  119 attggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||| ||||||| |||||| |||||    
T  22802607 attggtgtgatttttcatcgaattcacaaca 22802577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 33415455 - 33415334
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| ||||  ||||| |||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||| |||||    
T  33415455 tgttttctacttttggcttgtgtttataattgtcccatacactttgattttggttgcttgactatcccttgctccacacatcaagtttgttatttgtgtg 33415356  T
Q  128 attt-tcatagaattcgcaaca 148  Q
    |||| |||| | ||||||||||    
T  33415355 atttctcatcggattcgcaaca 33415334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 44599819 - 44599680
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||| ||||| |||||||||||||||||||||||| ||||||||||||| |||||||| ||||| |||||||| ||| |  || ||||||||||||    
T  44599819 tcttcttt-tgttcttctcgccgttgttttctacttttgccttgtatttaattattccatacgctttg-ttttggttgcttaattat-ccttgctccaca 44599723  T
Q  106 catcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    ||||||| ||||||||||||||| ||||||| ||||||||||||    
T  44599722 catcaag-ttgttattggtgtgatttttcatcgaattcgcaaca 44599680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 47210755 - 47210655
Alignment:
Q  29 ttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |  ||| |||||||||||||||||| |||||||||||||||    
T  47210755 ttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgctttattatctcttgctccacacatcaag-ttgttattggtgtga 47210658  T
Q  129 ttt 131  Q
    |||    
T  47210657 ttt 47210655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 21 - 149
Target Start/End: Complemental strand, 17662219 - 17662091
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||||||||||||| ||| ||| |||||||||||||||||||| ||| | || |||||  |||||||||||||||||||||||| |||    
T  17662219 tctcgctgttgttttctacttttggcatgtgattataattgttccatacactttggttt-gattgcttgattatcccttgctccacacatcaagtt-gtt 17662122  T
Q  119 attggtgtgattttcatagaattcgcaacag 149  Q
    ||||||||||||||||  |||||||||||||    
T  17662121 attggtgtgattttcaacgaattcgcaacag 17662091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 18709145 - 18709021
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||    || ||||||||||| |||||||| |||||  || ||||||||||||    
T  18709145 tcttctttgtgttcttctcgccgttgttttctactattggcttgtatttataactttcatacactttg-ttttggttgcttgattatgccttgctccaca 18709047  T
Q  106 catcaagtttgttattggtgtgatttt 132  Q
    ||||||| |||||||||||||| ||||    
T  18709046 catcaag-ttgttattggtgtggtttt 18709021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 36921458 - 36921338
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| ||||  |||||| |||||||||| |||| |||| | |||  |||||||||||||||||||||||||||||||||||||    
T  36921458 tgttttctacttttggcttgtgtttataattgtttcatacactttatttt-ggttgcctgattatcccttgctccacacatcaagtttgttattggtgtg 36921360  T
Q  128 a-ttttcatagaattcgcaaca 148  Q
    | ||||||| ||||||||||||    
T  36921359 atttttcatcgaattcgcaaca 36921338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 2891657 - 2891780
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||| |||| |||| |||||  || | |||||||||||||||||||||||||||||    
T  2891657 cgttgttttctacttttggcttgtgtttataattgttccatacactttatttt-ggttgcttgattattctttgctccacacatcaagtttgttattggt 2891755  T
Q  125 gtga-ttttcatagaattcgcaaca 148  Q
    |||| ||||||| |||||| |||||    
T  2891756 gtgatttttcatcgaattcacaaca 2891780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 37313044 - 37312924
Alignment:
Q  30 tgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||| | ||| |||||||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||| |||||||||||    
T  37313044 tgttttctacttttggcttatgattataattgtttcatacactttgtttt-ggttgcttgactatcccttgctccacacatcaagtttattattggtgtg 37312946  T
Q  128 a-ttttcatagaattcgcaaca 148  Q
    | |||||||  |||||||||||    
T  37312945 atttttcatcaaattcgcaaca 37312924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 32 - 132
Target Start/End: Complemental strand, 3824569 - 3824466
Alignment:
Q  32 ttttctactttt-ggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga 128  Q
    |||||||||||| ||||||| ||||  | ||||||||||| |||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  3824569 ttttctactttttggcttgtgtttataactgttccatacattttgattttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtga 3824470  T
Q  129 tttt 132  Q
    ||||    
T  3824469 tttt 3824466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 16934128 - 16933988
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||   |||||||| ||| |   |||||||||||    
T  16934128 ttctcttcttt-tgttcttctcgccgttgttttctacttttggcttgtatttaattattccatacgctt--gttttggttgcttaa--ttcccttgctcc 16934034  T
Q  103 acacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||| ||| ||||||||||||||| ||||||| |||||| |||||    
T  16934033 acacattaag-ttgttattggtgtgatttttcatcgaattcacaaca 16933988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 145
Target Start/End: Complemental strand, 36919549 - 36919432
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||| ||||| ||||  ||||||||||||||||| |||| |||| | |||  |||||||||||||||||||||||||||||||||||||    
T  36919549 tgttttctacttttgacttgtgtttataattgttccatacactttatttt-ggttgcctgattatcccttgctccacacatcaagtttgttattggtgtg 36919451  T
Q  128 a-ttttcatagaattcgca 145  Q
    | ||||||| |||||||||    
T  36919450 atttttcatcgaattcgca 36919432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 21 - 129
Target Start/End: Original strand, 40637435 - 40637545
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacactttg-tttttggtttcttgaccatcccttgctccacacatcaagtttgt 117  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| |||||  || ||||||||||||||||||| ||||    
T  40637435 tctcgctgttgttttctacttttggcttgtgattataattgttccatacactttgttttttggttgcttgattattccttgctccacacatcaag-ttgt 40637533  T
Q  118 tattggtgtgat 129  Q
    ||||||||||||    
T  40637534 tattggtgtgat 40637545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 5101284 - 5101404
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    |||||||| | |||||||||| ||||  |||||||||||||||||||||| |||| |||||| |||||||| ||||||||||||||||||||||||||||    
T  5101284 tgttttctccctttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgactatcccttgatccacacatcaagtttgttattggtgtg 5101382  T
Q  128 attt-tcatagaattcgcaaca 148  Q
     ||| |||| |||||| |||||    
T  5101383 ttttctcatcgaattcacaaca 5101404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 47563127 - 47563231
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||| | ||||  |||||||||||||||||||||| |||| |||||  || ||||||||||||||||||||||||||||||||||    
T  47563127 tgttttctacttttggcttatgtttataattgttccatacactttgtttt-ggttgcttgattattccttgctccacacatcaagtttgttattggtgtg 47563225  T
Q  128 attttc 133  Q
     |||||    
T  47563226 gttttc 47563231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 24889157 - 24889286
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||  | ||  || ||||||||||||||||||| |||||    
T  24889157 tctcgctgttgttttctacttttggcttgtgattataattgttccatacactttgtttt-ggttgttagattattccttgctccacacatcaag-ttgtt 24889254  T
Q  119 attggtgtg--attttcatagaattcgcaaca 148  Q
    |||||||||  |||||||| ||||||||||||    
T  24889255 attggtgtgatattttcatcgaattcgcaaca 24889286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 32 - 148
Target Start/End: Complemental strand, 40091378 - 40091259
Alignment:
Q  32 ttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga- 128  Q
    ||||||||||||||||||| ||||  ||| ||||||||||||| |||| |||| |||||  |||  |||||||||||||||||||||||||||||||||     
T  40091378 ttttctacttttggcttgtgtttataattattccatacactttatttt-ggttgcttgattatcttttgctccacacatcaagtttgttattggtgtgaa 40091280  T
Q  129 -ttttcatagaattcgcaaca 148  Q
     ||||||| ||||||||||||    
T  40091279 tttttcatcgaattcgcaaca 40091259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 52942460 - 52942347
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||||||||| ||||| || | |||  ||| ||| ||||||||||||| ||||||    
T  52942460 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttgattgcctgattatctcttactccacacatcaaatttgtt 52942361  T
Q  119 attggtgtgatttt 132  Q
    ||| ||||||||||    
T  52942360 atttgtgtgatttt 52942347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 16453676 - 16453796
Alignment:
Q  30 tgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| ||| ||| |||| ||||||||||||||| |||| | |||  ||| |||||||||||||||||||||||||||||||||    
T  16453676 tgttttctacttttggcttgtgattataactgtttcatacactttgtttt-ggttgcctgattatcacttgctccacacatcaagtttgttattggtgtg 16453774  T
Q  128 a-ttttcatagaattcgcaaca 148  Q
    | ||||||| |||||| |||||    
T  16453775 atttttcatcgaattcacaaca 16453796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 6133202 - 6133308
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||||| ||||| ||||  |||||| ||||||||||||||  |||| |||||  || |||||||||||||||||||||||||||||||    
T  6133202 cgttgttttctacttttgacttgtgtttataattgtttcatacactttgtttc-ggttgcttgattattccttgctccacacatcaagtttgttattggt 6133300  T
Q  125 gtgatttt 132  Q
    || |||||    
T  6133301 gtaatttt 6133308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 27499413 - 27499519
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||||| ||||| ||||  ||||||||||| |||||||||| |||| ||||   || | |||||||||||||||||||||||||||||    
T  27499413 cgttgttttctacttttgacttgtgtttataattgttccataaactttgtttt-ggttgcttggttattcattgctccacacatcaagtttgttattggt 27499511  T
Q  125 gtgatttt 132  Q
    ||||||||    
T  27499512 gtgatttt 27499519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 29 - 148
Target Start/End: Complemental strand, 24446623 - 24446502
Alignment:
Q  29 ttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgt 126  Q
    |||||||||||||||||||||| ||||  ||| ||||||||||||| |||| |||| |||||  ||||||| || |||||||||||||||||||||||||    
T  24446623 ttgttttctacttttggcttgtgtttataatttttccatacactttatttt-ggttgcttgattatcccttacttcacacatcaagtttgttattggtgt 24446525  T
Q  127 gattt-tcatagaattcgcaaca 148  Q
    | ||| |||| |||||| |||||    
T  24446524 gttttctcatcgaattcacaaca 24446502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 58 - 149
Target Start/End: Original strand, 16455624 - 16455715
Alignment:
Q  58 tgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga-ttttcatagaattcgcaacag 149  Q
    |||||||||||||||||||| |||| | |||  ||| |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||    
T  16455624 tgttccatacactttgtttt-ggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaacag 16455715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 18409281 - 18409210
Alignment:
Q  60 ttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgatttt 132  Q
    |||||||||||||||||| |||| |||||| ||| ||||||||||||||||||||| ||||||||||||||||    
T  18409281 ttccatacactttgtttt-ggttgcttgactatcacttgctccacacatcaagtttattattggtgtgatttt 18409210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 56030828 - 56030945
Alignment:
Q  30 tgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga- 128  Q
    |||||||||||||||  |||||||||    |||||||||||||||||| |||| | |||| ||| ||||||||||| ||||||||| ||||||||||||     
T  56030828 tgttttctacttttgt-ttgtatttataacttccatacactttgtttt-ggttgcgtgactatctcttgctccacatatcaagtttattattggtgtgat 56030925  T
Q  129 ttttcatagaattcgcaaca 148  Q
    ||||||| ||||||||||||    
T  56030926 ttttcatcgaattcgcaaca 56030945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 32 - 127
Target Start/End: Original strand, 13547524 - 13547621
Alignment:
Q  32 ttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||| ||||  |||||||||||||||||| ||||||||   | |  ||| |||| ||||||||||||||||||||||||||||    
T  13547524 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgtctaattatcacttgttccacacatcaagtttgttattggtgtg 13547621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 36378659 - 36378777
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    |||||||||||||| | |||| ||||  |||||| ||||||||||||||  |||| |||||  ||  ||||||||||| ||||||| | |||||||||||    
T  36378659 tgttttctacttttcgtttgtgtttataattgtttcatacactttgttt--ggttgcttgattattacttgctccacatatcaagtattttattggtgtg 36378756  T
Q  128 attttcatagaattcgcaaca 148  Q
    |||||||| ||||||||||||    
T  36378757 attttcatcgaattcgcaaca 36378777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 36380716 - 36380827
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| ||||  |||||| ||||||||||||||  | || ||||| |||  ||| ||||||||||||| | | |||||||||||    
T  36380716 tgttttctacttttggcttgtgtttataattgtttcatacactttgttt--gattgcttgatcattacttactccacacatcaaatattttattggtgtg 36380813  T
Q  128 attttcatagaatt 141  Q
    |||||||| |||||    
T  36380814 attttcatcgaatt 36380827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 3937212 - 3937126
Alignment:
Q  60 ttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||||||||||  |||| |||||  |||||||||||| ||||||||| ||||||||||||||| ||||||| ||||||||||||    
T  3937212 ttccatacactttgttt--ggttgcttgattatcccttgctcctcacatcaag-ttgttattggtgtgatttttcatcgaattcgcaaca 3937126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 127
Target Start/End: Original strand, 48486687 - 48486787
Alignment:
Q  28 gttgttttctacttttggcttgtatt--taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtg 125  Q
    ||||||||||||||||||||||| ||  |||||||||||| ||||||| |||| ||| |||||  ||| |||| ||||| |||||| |||||||||||||    
T  48486687 gttgttttctacttttggcttgtgtttataattgttccattcactttg-ttttagttgcttgattatcgcttgttccacgcatcaaatttgttattggtg 48486785  T
Q  126 tg 127  Q
    ||    
T  48486786 tg 48486787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 38270068 - 38269995
Alignment:
Q  75 ttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||| |||||| ||||||| ||||||||||||||||||||||||||||| |||  || |||||| |||||    
T  38270068 ttttggttgcttgactatcccttactccacacatcaagtttgttattggtgtgttttctatcgaattcccaaca 38269995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 4215672 - 4215792
Alignment:
Q  31 gttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga 128  Q
    |||||||||||||||||||| ||| |||||||| |||||||||||||||| ||| |||||  || ||||||| ||||||||||| |||||||| ||||||    
T  4215672 gttttctacttttggcttgtgattataattgtttcatacactttgttttt-gttgcttgattattccttgcttcacacatcaag-ttgttatttgtgtga 4215769  T
Q  129 ---ttttcatagaattcgcaaca 148  Q
       || |||| ||||||||||||    
T  4215770 gttttctcatcgaattcgcaaca 4215792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 12395813 - 12395712
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||| ||||||||||||| ||| ||||  ||| ||| |||| ||||||||| |||| | |||  ||| ||||||||||||||||||||||||||||||    
T  12395813 cgttgtcttctacttttggcatgtgtttataatttttcgatactctttgtttt-ggttgcctgattatcacttgctccacacatcaagtttgttattggt 12395715  T
Q  125 gtg 127  Q
    |||    
T  12395714 gtg 12395712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 12400775 - 12400674
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||| ||||||||||||| ||| ||||  ||| ||| |||| ||||||||| |||| | |||  ||| ||||||||||||||||||||||||||||||    
T  12400775 cgttgtcttctacttttggcatgtgtttataatttttcgatactctttgtttt-ggttgcctgattatcacttgctccacacatcaagtttgttattggt 12400677  T
Q  125 gtg 127  Q
    |||    
T  12400676 gtg 12400674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 24879351 - 24879409
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtatt--taattgttccatacactttgtttt 77  Q
    |||||| ||||||||||||||||||||||| ||  ||||||||||||||||||||||||    
T  24879351 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgtttt 24879409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 44683056 - 44683134
Alignment:
Q  162 gtttgttttgtttctttgaggtccaatagttggtcatgctatgatatggatcacattatctttcattatatcaactcaac 241  Q
    |||||||||| ||||||| ||||||||||    |||||||||||||||||||| |||||| |||||||||||| ||||||    
T  44683056 gtttgttttgcttctttggggtccaatagacattcatgctatgatatggatcatattatc-ttcattatatcagctcaac 44683134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 5664605 - 5664722
Alignment:
Q  30 tgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgat 129  Q
    |||||||||||||||| ||||  |||    |||||||||||||||||| |||| |||||  ||  | | ||||||||||||||| | |||||||||||||    
T  5664605 tgttttctacttttggtttgtcattataacttccatacactttgtttt-ggttgcttgattattaccttctccacacatcaagtattttattggtgtgat 5664703  T
Q  130 tttcatagaattcgcaaca 148  Q
    |||||| |||||| |||||    
T  5664704 tttcatcgaattcacaaca 5664722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 60 - 142
Target Start/End: Complemental strand, 18534770 - 18534689
Alignment:
Q  60 ttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgattttcatagaattc 142  Q
    |||||||||||||||||| |||| |||||  ||  ||||||||||||||||||| | |||||||||||| |||||| ||||||    
T  18534770 ttccatacactttgtttt-ggttgcttgattattacttgctccacacatcaagtattttattggtgtgagtttcatcgaattc 18534689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 19323124 - 19323177
Alignment:
Q  95 cttgctccacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||| |||||    
T  19323124 cttgctccacacatcaagtattttattggtgtgattttcatcgaattcacaaca 19323177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 19096298 - 19096370
Alignment:
Q  77 ttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||| |||||| ||||||| ||||||||||||| ||| ||||| |||||| ||||||| ||||||||||||    
T  19096298 ttggttgcttgactatcccttactccacacatcaaatttattattagtgtgatttttcatcgaattcgcaaca 19096370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 41997887 - 41997958
Alignment:
Q  60 ttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgatttt 132  Q
    |||||||||||||||||| |||| |||||  ||| ||| ||||||||||||||||| ||||||||||| ||||    
T  41997887 ttccatacactttgtttt-ggttgcttgattatcactttctccacacatcaagtttattattggtgtgttttt 41997958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 127
Target Start/End: Original strand, 47275092 - 47275190
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| ||||  ||| ||| ||||||||  |||| | || |||||  ||||||| |||||||||||||||||||||||| ||||    
T  47275092 tgttttctacttttggcttgtgtttataattattctatacacttcatttt-gattgcttgattatcccttactccacacatcaagtttgttattgatgtg 47275190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 24880813 - 24880883
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtatt--taattgttccatacactttgt-ttttggtttcttga 88  Q
    |||||| ||||||||||||||||||||||| ||  |||||||||| |||||||||| |||||||| |||||    
T  24880813 tctcgctgttgttttctacttttggcttgtgtttataattgttccgtacactttgtgttttggttgcttga 24880883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 141
Target Start/End: Complemental strand, 15032480 - 15032401
Alignment:
Q  60 ttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgattttcatagaatt 141  Q
    |||||||||||||||||  |||| |||||  ||  |||||||| |||||||||| | ||||||||||||||||||| |||||    
T  15032480 ttccatacactttgttt--ggttgcttgattattacttgctccgcacatcaagtattttattggtgtgattttcatcgaatt 15032401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 8756156 - 8756103
Alignment:
Q  95 cttgctccacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    ||||||||||||||||||| | |||||| |||||||||||| |||||| |||||    
T  8756156 cttgctccacacatcaagtattttattgatgtgattttcatcgaattcacaaca 8756103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 12102513 - 12102566
Alignment:
Q  95 cttgctccacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||||||||||||||   ||||||||||||||||||| |||||| |||||    
T  12102513 cttgctccacacatcaagtagtttattggtgtgattttcatcgaattcacaaca 12102566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 18311270 - 18311233
Alignment:
Q  95 cttgctccacacatcaagtttgttattggtgtgatttt 132  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  18311270 cttgctccacacatcaagtttattattggtgtgatttt 18311233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 619370 - 619298
Alignment:
Q  77 ttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgattt-tcatagaattcgcaaca 148  Q
    |||||| |||||| ||||||| ||||||||||||| ||| ||||||||||| ||| |||| |||| |||||||    
T  619370 ttggttgcttgactatcccttactccacacatcaaatttattattggtgtgttttctcatcgaatccgcaaca 619298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 18537412 - 18537325
Alignment:
Q  60 ttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||||||||||||| | || |||||  ||  ||||||||||||||||||| | |||| |||||||  ||||| |||||| |||||    
T  18537412 ttccatacactttgtttt-gattgcttgattattacttgctccacacatcaagtattttataggtgtgaacttcatcgaattcacaaca 18537325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 118; Significance: 4e-60; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 27827335 - 27827479
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||    
T  27827335 ttctcttctttgtgttcttctcgccgttgttttctacttttgacttgtatttaattgttccatacactttg-ttttggttgcttgactatcccttgctcc 27827433  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  27827434 acacatcaagtttgttattggtgtgattttcatcgaattcgcaaca 27827479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 27829646 - 27829791
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||| |||||| ||||||||||||    
T  27829646 ttctcttctttgtgttcttctcgccgttgttttctacttttgacttatatttaattgttccatacactttg-ttttggttgcttgactatcccttgctcc 27829744  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaacag 149  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  27829745 acacatcaagtttgttattggtgtgattttcatcgaattcgcaacag 27829791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 4424368 - 4424512
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  4424368 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggttgcttgattatcccttgctcc 4424467  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    ||||| |||| |||||||||||||||||||||| |||||| |||||    
T  4424468 acacaccaag-ttgttattggtgtgattttcatcgaattcacaaca 4424512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 32339659 - 32339803
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||  ||||||||| ||    
T  32339659 ttctcttctttgtgttcttctcgccgttattttctacttttgacttgtatttaattgttccatacactttgattttggttgcttgattatcccttgcccc 32339758  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||    
T  32339759 acacatcaag-ttgttattggtgtgattttcatcgaattcgcaaca 32339803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 15809568 - 15809712
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||| ||||||||||| |||||||| |||||  ||||||||||||    
T  15809568 ttctcttctttgtgttcttctcgccgttgttttctatttttgccttgtatttaattgtttcatacactttg-ttttggttgcttgattatcccttgctcc 15809666  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaacag 149  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||    
T  15809667 acacatcaag-ttgttattggtgtgattttcatcgaattcgcaacag 15809712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 3883580 - 3883436
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  |||| |||||||    
T  3883580 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatcctttgctcc 3883482  T
Q  103 acacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||| ||||||||| ||||| ||||||| ||||||||||||    
T  3883481 acacatcaag-ttgttattgatgtgatttttcatcgaattcgcaaca 3883436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 18811057 - 18811202
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||| ||||||||    
T  18811057 ttctcttctttgtgttcttctcgctgtcgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcttgattatctcttgctcc 18811156  T
Q  103 acacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||| ||||||||||||||| ||||||| ||||||||||||    
T  18811157 acacatcaag-ttgttattggtgtgatttttcatcgaattcgcaaca 18811202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 22684638 - 22684491
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| | |||  ||||||||||||    
T  22684638 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccataaactttgattttggttgcctgattatcccttgctcc 22684539  T
Q  103 acacatcaagtttgttattggtgtgatttt---catagaattcgcaaca 148  Q
    |||||||||| |||||||||||||||||||   ||| ||||||||||||    
T  22684538 acacatcaag-ttgttattggtgtgattttttccatcgaattcgcaaca 22684491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 18813231 - 18813377
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||| |||||||     
T  18813231 ttctcttctttgtgttcttctcgccgtcgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcttgattatctcttgctct 18813330  T
Q  103 acacatcaagtttgttattggtgtga-ttttcatagaattcgcaacag 149  Q
    ||| |||||| ||||||||||||||| ||||||| |||||||||||||    
T  18813331 acatatcaag-ttgttattggtgtgatttttcatcgaattcgcaacag 18813377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 28283206 - 28283062
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| || || ||||||||||| |||||||| |||||  ||||||||||||    
T  28283206 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttatttttttcatacactttg-ttttggttgcttgattatcccttgctcc 28283108  T
Q  103 acacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||| ||||||||||||||| ||||||| ||||||||||||    
T  28283107 acacatcaag-ttgttattggtgtgatttttcatcgaattcgcaaca 28283062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 43530465 - 43530609
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||| ||||||||    
T  43530465 ttctcttctttgtgttcttcttgccattgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgctcc 43530563  T
Q  103 acacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||| ||||||||||||||| ||||||| ||||||||||||    
T  43530564 acacatcaag-ttgttattggtgtgatttttcattgaattcgcaaca 43530609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 609085 - 609230
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-tttttggtttcttgaccatcccttgctc 101  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||  ||| |||||||    
T  609085 ttctcttctttgtgttcttcttgccgttgttttctacttttggcttgtatttaattgtttcatacactttgttttttggttgcttgattatctcttgctc 609184  T
Q  102 cacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    ||| ||||||| |||||||||||| ||||||||| |||||| |||||    
T  609185 cacgcatcaag-ttgttattggtgcgattttcatcgaattcacaaca 609230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 44721193 - 44721318
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||| |||||  ||||||| ||||    
T  44721193 ttctcttctttgtgttcttctcgccgttgttttctacttttgacttgtatttaattattccatacactttg-ttttggttgcttgattatcccttactcc 44721291  T
Q  103 acacatcaagtttgttattggtgtgatt 130  Q
    |||||||||| |||||||||||||||||    
T  44721292 acacatcaag-ttgttattggtgtgatt 44721318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 3874351 - 3874470
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatca 110  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||   ||| ||||||||||||||||    
T  3874351 tttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttggttatctcttgctccacacatca 3874449  T
Q  111 agtttgttattggtgtgatttt 132  Q
    || |||||||||||||||||||    
T  3874450 ag-ttgttattggtgtgatttt 3874470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 15073073 - 15073202
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||||||||||||| | || |||||| ||||||||||||||||||||||||||||    
T  15073073 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgtttt-gattgcttgactatcccttgctccacacatcaagtttgtt 15073171  T
Q  119 attggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||| ||||||| ||||||||||||    
T  15073172 attggtgtgatttttcatcgaattcgcaaca 15073202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 15068343 - 15068472
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattt--aattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||||||||||||||||| |||  ||||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||||||||    
T  15068343 tctcgctgttgttttctacttttggcttgtgtttgtaattgttccatacactttgtttt-ggttgcttgactatcccttgttccacacatcaagtttgtt 15068441  T
Q  119 attggtgtga-ttttcatagaattcgcaaca 148  Q
     ||||||||| ||||||| ||||||||||||    
T  15068442 gttggtgtgatttttcatcgaattcgcaaca 15068472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 24873175 - 24873038
Alignment:
Q  13 tgtgttcatctcgccgttgttttctac-ttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaa 111  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||    || |||||||||||||||||||| ||| |  |||||||||||||||||||||    
T  24873175 tgtgttcttctcgccgttgttttctaccttttggcttgtatttataactttcatacactttgtttttggttgcttaattatcccttgctccacacatcaa 24873076  T
Q  112 gtttgttattggtgtga-ttttcatagaattcgcaacag 149  Q
    | ||||||||||||||| ||||||| |||||| ||||||    
T  24873075 g-ttgttattggtgtgatttttcatcgaattcacaacag 24873038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 14808128 - 14808234
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||||||||||| ||||  |||||| ||||||||||||||| |||| |||||  |||| |||||||||||||||||||||||||||||    
T  14808128 cgttgttttctacttttggcttgtgtttataattgtttcatacactttgtttt-ggttgcttgattatccgttgctccacacatcaagtttgttattggt 14808226  T
Q  125 gtgatttt 132  Q
    ||||||||    
T  14808227 gtgatttt 14808234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 30480468 - 30480364
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||| |||| |||||  || |||| ||||||||||||| ||||||||||||||     
T  30480468 tgttttctacttttggcttgtatttataattgttccatacactttgtttt-ggttgcttgattattccttactccacacatcaaatttgttattggtgtc 30480370  T
Q  128 attttc 133  Q
    ||||||    
T  30480369 attttc 30480364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 36865906 - 36866014
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||||||||| | ||||  |||||||||||||||||||||| |||| |||||  ||| |||||||||||||||||||||||||||| |    
T  36865906 cgttgttttctacttttggcttttgtttataattgttccatacactttgtttt-ggttgcttgattatcacttgctccacacatcaagtttgttattgat 36866004  T
Q  125 gtgattttca 134  Q
    ||| ||||||    
T  36866005 gtggttttca 36866014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 43082327 - 43082450
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||| ||||| ||||| |||||||||||||||||||||||||||||    || ||||||||||| |||||||| ||| |  |||||||||||||||    
T  43082327 tcttcttt-tgttcttctcgacgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttaattatcccttgctccaca 43082424  T
Q  106 catcaagtttgttattggtgtgatttt 132  Q
    ||||||| |||||||||||||||||||    
T  43082425 catcaag-ttgttattggtgtgatttt 43082450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 41383025 - 41383154
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| |||||||||||||| |||||||| ||||  ||||||||||| |||||||||| | || |||||  ||| ||||||||||||||||||||||||    
T  41383025 tctcgctgttgttttctacttctggcttgtgtttataattgttccataaactttgtttt-gattgcttgattatctcttgctccacacatcaagtttgtt 41383123  T
Q  119 attggtgt-gattttcatagaattcgcaaca 148  Q
    |||||||| | ||||||| ||| ||||||||    
T  41383124 attggtgtggtttttcatcgaactcgcaaca 41383154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 13858452 - 13858351
Alignment:
Q  30 tgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgat 129  Q
    ||||||||||||||||||||| ||||    |||||||||||||||||| |||| |||||  ||| ||||||||||||||||||||| |||||||||||||    
T  13858452 tgttttctacttttggcttgtgtttataacttccatacactttgtttt-ggttgcttgattatcacttgctccacacatcaagtttcttattggtgtgat 13858354  T
Q  130 ttt 132  Q
    |||    
T  13858353 ttt 13858351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 14419155 - 14419035
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||| ||||| ||||  |||||||||||||||||||||| |||||| |||  ||| ||||||||| |||||||||||||||||||||||    
T  14419155 tgttttctacttttgacttgtgtttataattgttccatacactttgtttt-ggtttcctgattatcacttgctccatacatcaagtttgttattggtgtg 14419057  T
Q  128 attt-tcatagaattcgcaaca 148  Q
     ||| |||| |||||| |||||    
T  14419056 ttttctcatcgaattcacaaca 14419035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 33 - 132
Target Start/End: Complemental strand, 33541372 - 33541272
Alignment:
Q  33 tttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgatt 130  Q
    |||||||||||||||||| ||||  ||||||||||||||||| |||| | || |||||  ||||||| ||||||||||||||||||||||||||||||||    
T  33541372 tttctacttttggcttgtgtttataattgttccatacactttatttt-gattgcttgattatcccttactccacacatcaagtttgttattggtgtgatt 33541274  T
Q  131 tt 132  Q
    ||    
T  33541273 tt 33541272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 43079956 - 43080079
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||| ||||| |||||||||||||||||||||||| ||||||||||    || ||||||||||| |||||||| ||| |  |||| ||||||||||    
T  43079956 tcttcttt-tgttcttctcgccgttgttttctacttttgacttgtatttataactttcatacactttg-ttttggttgcttaattatccattgctccaca 43080053  T
Q  106 catcaagtttgttattggtgtgatttt 132  Q
    ||||||| |||||||||||||||||||    
T  43080054 catcaag-ttgttattggtgtgatttt 43080079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 27106835 - 27106747
Alignment:
Q  60 ttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgattt-tcatagaattcgcaaca 148  Q
    |||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||||    
T  27106835 ttccatacactttgtttt-ggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgttttctcatcgaatttgcaaca 27106747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 28251539 - 28251428
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| |||||||||||||| |||||||| ||| |||||||||||||||||||| |||||||| | |||  || ||||||||||||||||||| |||||    
T  28251539 tctcgctgttgttttctacttgtggcttgtgattataattgttccatacactttg-ttttggttgcctgattattccttgctccacacatcaag-ttgtt 28251442  T
Q  119 attggtgtgatttt 132  Q
    ||||||||||||||    
T  28251441 attggtgtgatttt 28251428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 2468066 - 2467979
Alignment:
Q  60 ttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||| ||||||||||||| |||| |||||| ||| ||||||||||||||||||||| ||||||||||||||||||| |||||| |||||    
T  2468066 ttccctacactttgtttt-ggttgcttgactatcacttgctccacacatcaagtttattattggtgtgattttcatcgaattcacaaca 2467979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 135
Target Start/End: Original strand, 31162579 - 31162686
Alignment:
Q  27 cgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgt 126  Q
    |||||||||||||||||||||||||||||    |||||||||||||||||| |||| ||| |  ||  ||||||||||||||||||| | ||||||||||    
T  31162579 cgttgttttctacttttggcttgtatttataacttccatacactttgtttt-ggttacttaattattacttgctccacacatcaagtattttattggtgt 31162677  T
Q  127 gattttcat 135  Q
    |||||||||    
T  31162678 gattttcat 31162686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 29 - 148
Target Start/End: Complemental strand, 35872422 - 35872301
Alignment:
Q  29 ttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgt 126  Q
    |||||||||||||||||||||| ||||  ||| ||||||||||||| |||| |||| |||||  ||||||| || |||||||||||||||||||||||||    
T  35872422 ttgttttctacttttggcttgtgtttataatttttccatacactttatttt-ggttgcttgattatcccttacttcacacatcaagtttgttattggtgt 35872324  T
Q  127 gattt-tcatagaattcgcaaca 148  Q
    | ||| |||| |||||| |||||    
T  35872323 gttttctcatcgaattcacaaca 35872301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 41385107 - 41385233
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| |||||||| |||||||||||||| ||||  |||||||||||||||||  ||||||||  ||||  ||||||||||||||    ||||||||||    
T  41385107 tctcgctgttgttttatacttttggcttgtgtttataattgttccatacacttttgttttggttgtttgattatcccttgctccac----caagtttgtt 41385202  T
Q  119 attggtgtga-ttttcatagaattcgcaaca 148  Q
    ||| |||||| ||||||| ||||||||||||    
T  41385203 atttgtgtgatttttcatggaattcgcaaca 41385233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 15185652 - 15185581
Alignment:
Q  60 ttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgatttt 132  Q
    |||||||||||||||||| |||| |||||| ||||||| |||||||||||||||||||||||| |||||||||    
T  15185652 ttccatacactttgtttt-ggttgcttgactatcccttactccacacatcaagtttgttattgatgtgatttt 15185581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 37214232 - 37214131
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||||||||||| ||||  ||||||| |||||||||||||| |||| ||||   ||| ||| ||||| ||||||||||||||||||||    
T  37214232 cgttgttttctacttttggcttgtgtttataattgttctatacactttgtttt-ggttgcttgcttatctcttactccatacatcaagtttgttattggt 37214134  T
Q  125 gtg 127  Q
    |||    
T  37214133 gtg 37214131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 5372148 - 5372043
Alignment:
Q  29 ttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgt 126  Q
    |||||||||||||||||||||  ||||  | ||||||||||| |||  |||| ||| |||||  |||| ||||||||||||||||||||||||||| |||    
T  5372148 ttgttttctacttttggcttgagtttataactgttccatacattttaattttagttgcttgaatatccattgctccacacatcaagtttgttattgatgt 5372049  T
Q  127 gatttt 132  Q
    ||||||    
T  5372048 gatttt 5372043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 63 - 148
Target Start/End: Original strand, 15956358 - 15956443
Alignment:
Q  63 catacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    ||||||||||||||| ||||  ||||| |||||||||||||||||||||||||||||||| ||||| ||||||| |||||| |||||    
T  15956358 catacactttgtttt-ggttgtttgactatcccttgctccacacatcaagtttgttattgatgtgatttttcatcgaattcacaaca 15956443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 148
Target Start/End: Original strand, 14477630 - 14477740
Alignment:
Q  40 ttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga-ttttcata 136  Q
    ||||||||||| ||||  |||||| ||||||||||||||| | | ||| ||  ||| |||||||||||||||||||||||||||||||||| |||||||     
T  14477630 ttttggcttgtgtttatgattgtttcatacactttgttttggttgtct-gattatcacttgctccacacatcaagtttgttattggtgtgatttttcatc 14477728  T
Q  137 gaattcgcaaca 148  Q
    |||||| |||||    
T  14477729 gaattcacaaca 14477740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 27911446 - 27911550
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||||||||||| ||||  ||||||||| |||||||||||| | |||||  |  ||| ||||||||||||||||||||| ||||||||    
T  27911446 cgttgttttctacttttggcttgtgtttataattgttcca-acactttgttttag-tttcta-attatcacttgctccacacatcaagttttttattggt 27911542  T
Q  125 gtgatttt 132  Q
    ||||||||    
T  27911543 gtgatttt 27911550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 27957865 - 27957969
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||||||||||| ||||  ||||||||| |||||||||||| | |||||  |  ||| ||||||||||||||||||||| ||||||||    
T  27957865 cgttgttttctacttttggcttgtgtttataattgttcca-acactttgttttag-tttcta-attatcacttgctccacacatcaagttttttattggt 27957961  T
Q  125 gtgatttt 132  Q
    ||||||||    
T  27957962 gtgatttt 27957969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 25952891 - 25953010
Alignment:
Q  31 gttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga 128  Q
    ||||||||||||||| |||| ||||  |||| | |||||||||| |||| |||| |||||  ||| ||| |||||||||||||||||||||||||||||     
T  25952891 gttttctacttttggattgtgtttataattgcttcatacactttatttt-ggttgcttgattatcactttctccacacatcaagtttgttattggtgtgt 25952989  T
Q  129 ttt-tcatagaattcgcaaca 148  Q
    ||| |||| |||||| |||||    
T  25952990 tttctcatcgaattcacaaca 25953010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 148
Target Start/End: Original strand, 183246 - 183310
Alignment:
Q  85 ttgaccatcccttgctccacacatcaagtttgttattggtgtgattt-tcatagaattcgcaaca 148  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||| |||| |||||| |||||    
T  183246 ttgactatcccttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcacaaca 183310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 60 - 148
Target Start/End: Original strand, 21482708 - 21482798
Alignment:
Q  60 ttccatacactttgttttt-ggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    ||||||||||||| ||||| |||| ||| |  ||| ||||||||||||||||||||| |||||||||||| ||||||| |||||| |||||    
T  21482708 ttccatacactttattttttggttgcttcattatcacttgctccacacatcaagtttattattggtgtgatttttcatcgaattcacaaca 21482798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 2467932 - 2467887
Alignment:
Q  96 ttgctccacacatcaagtttgttattggtgtgattttcatagaatt 141  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||    
T  2467932 ttgctccacacatcaagtttattattggtgtgattttcatcgaatt 2467887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 3005539 - 3005486
Alignment:
Q  95 cttgctccacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||| |||||    
T  3005539 cttgctccacacatcaagtattttattggtgtgattttcatcgaattcacaaca 3005486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 181844 - 181896
Alignment:
Q  27 cgttgttttctacttttggcttgtatt--taattgttccatacactttgtttt 77  Q
    |||||||||||||||||||||||| ||  |||||||| |||||||||||||||    
T  181844 cgttgttttctacttttggcttgtgtttataattgtttcatacactttgtttt 181896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 2467833 - 2467781
Alignment:
Q  96 ttgctccacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||| ||||||||||| ||||| ||||||||||||| |||||| |||||    
T  2467833 ttgctccatacatcaagtttattattagtgtgattttcatcgaattcacaaca 2467781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 148
Target Start/End: Original strand, 21480900 - 21480990
Alignment:
Q  60 ttccatacactttgttttt-ggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    ||||||||||||||||||| ||||  ||||   || ||| ||||||||||||||||| |||||||||| | ||||||| |||||| |||||    
T  21480900 ttccatacactttgttttttggttgtttgattgtcacttactccacacatcaagtttattattggtgttatttttcatcgaattcacaaca 21480990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 114; Significance: 9e-58; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 34477038 - 34476894
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||||||||||||    
T  34477038 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcttgattatcccttgctcc 34476939  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||    
T  34476938 acacatcaag-ttgttattggtgtgattttcatcgaattcgcaaca 34476894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 34479403 - 34479259
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||  ||||||||||||    
T  34479403 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgcatttaattgttccatacactttgattttggttgcttgattatcccttgctcc 34479304  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||||| ||||||||||||||||||||||  |||||||||||    
T  34479303 acacatcaag-ttgttattggtgtgattttcatcaaattcgcaaca 34479259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 11 - 149
Target Start/End: Original strand, 38882390 - 38882526
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatca 110  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||| ||||||||||||||||    
T  38882390 tttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgctccacacatca 38882488  T
Q  111 agtttgttattggtgtgattttcatagaattcgcaacag 149  Q
    || |||||||||||||||||||||| |||||||||||||    
T  38882489 ag-ttgttattggtgtgattttcatcgaattcgcaacag 38882526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 3 - 133
Target Start/End: Complemental strand, 10529083 - 10528954
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||  |||||||||| |    
T  10529083 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcctgattatcccttgcttc 10528984  T
Q  103 acacatcaagtttgttattggtgtgattttc 133  Q
    |||||||||| ||||||||||||||||||||    
T  10528983 acacatcaag-ttgttattggtgtgattttc 10528954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 21684437 - 21684293
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||| ||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||| || |||||  ||||||||||||    
T  21684437 ttctcttttttgtgttcttctctccgttgttttctacttttggcttttatttaattgttccatacactttg-ttttgattgcttgattatcccttgctcc 21684339  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaacag 149  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||    
T  21684338 acacatcaag-ttgttattggtgtgattttcatcgaattcgcaacag 21684293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 25921458 - 25921333
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||  ||||||||||||    
T  25921458 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacacttt-attttggttgcttgattatcccttgctcc 25921360  T
Q  103 acacatcaagtttgttattggtgtgatt 130  Q
    |||||||||| |||||||||||||||||    
T  25921359 acacatcaag-ttgttattggtgtgatt 25921333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 25804321 - 25804463
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||| |||||||||||    
T  25804321 tcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgctccaca 25804419  T
Q  106 catcaagtttgttattggtgtg--attttcatagaattcgcaaca 148  Q
    ||||||| ||||||||||||||  |||||||| |||| |||||||    
T  25804420 catcaag-ttgttattggtgtgatattttcatcgaatacgcaaca 25804463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 10749997 - 10750137
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||| |  |||||||||||||||    
T  10749997 tcttcttt-tgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttaattatcccttgctccaca 10750095  T
Q  106 catcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    ||||||| ||||||||||||||||||| || |||||| |||||    
T  10750096 catcaag-ttgttattggtgtgattttgatcgaattcacaaca 10750137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 10757473 - 10757613
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||| |  |||||||||||||||    
T  10757473 tcttcttt-tgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttaattatcccttgctccaca 10757571  T
Q  106 catcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    ||||||| ||||||||||||||||||| || |||||| |||||    
T  10757572 catcaag-ttgttattggtgtgattttgatcgaattcacaaca 10757613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 18469303 - 18469448
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    |||||||||||||| |||||||| |||||  ||||||||||||    
T  18469303 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataacttccatacactttg-ttttggttgcttgattatcccttgctcc 18469401  T
Q  103 acacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||||||||||||||| ||| ||||||| |||||| |||||    
T  18469402 acacatcaagtttgttattggtatgatttttcatcgaattcacaaca 18469448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 4236922 - 4237065
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||| |||||| |    
T  4236922 ttctcttatttgtgttcttctcaccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgcttc 4237020  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||||| |||||||||||||||||||||  |||||| |||||    
T  4237021 acacatcaag-ttgttattggtgtgattttcaacgaattcacaaca 4237065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 18466978 - 18467123
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    |||||||||||||| ||||| || |||||  ||||||||||||    
T  18466978 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataacttccatacactttg-ttttgattgcttgattatcccttgctcc 18467076  T
Q  103 acacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    ||||||||||||||||||| |||||| ||||||| |||||| |||||    
T  18467077 acacatcaagtttgttattagtgtgatttttcatcgaattcacaaca 18467123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 2175203 - 2175318
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatca 110  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||  ||||||||||||||||||||    
T  2175203 tttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgtttcatacactttg-ttttggttgcttgattatcccttgctccacacatca 2175301  T
Q  111 agtttgttattggtgtga 128  Q
    || |||||||||||||||    
T  2175302 ag-ttgttattggtgtga 2175318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 21 - 148
Target Start/End: Complemental strand, 3373104 - 3372977
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttat 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||| |  |||||||||||||||||||||| |||||||    
T  3373104 tctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttat 3373006  T
Q  121 tggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||| ||||||| |||||| |||||    
T  3373005 tggtgtgatttttcatcgaattcacaaca 3372977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 10587117 - 10587252
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatca 110  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||    |||||||||||||||||| |||| |||||  |||| |||||||||||||||    
T  10587117 tttgtgttcttctcgccgttgttttctacttttgacttgtatttataacttccatacactttgtttt-ggttgcttgattatcc-ttgctccacacatca 10587214  T
Q  111 agtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    ||||||||||||||||||||||||| |||||| |||||    
T  10587215 agtttgttattggtgtgattttcatcgaattcacaaca 10587252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 27912830 - 27912958
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||||    |||||||||||||| |||||||| |||||  ||||||| ||||    
T  27912830 ttctcttctttgtgttcttctcgccgttgttttctacttttagcttgtatttataacttccatacactttg-ttttggttgcttgattatcccttactcc 27912928  T
Q  103 acacatcaagtttgttattggtgtgatttt 132  Q
    ||||||||||||||||||||||| ||||||    
T  27912929 acacatcaagtttgttattggtgggatttt 27912958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 31179358 - 31179213
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtt-ttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctc 101  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||| |||||||||||||| |||||||| ||| |  |||||||||||    
T  31179358 ttctcttctttgtgttcttctcgccgttgttcttctacttttggcttgtgtttaattattccatacactttg-ttttggttgcttaattatcccttgctc 31179260  T
Q  102 cacacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    || |||||||| ||||||||||||||| ||||||| |||||| |||||    
T  31179259 catacatcaag-ttgttattggtgtgatttttcatcgaattcacaaca 31179213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 21 - 149
Target Start/End: Original strand, 39854791 - 39854922
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| |||||||| |||||||||||||| ||||  ||||||||||||||||| ||||||||| ||| || ||||||||||||||| ||||||||| ||    
T  39854791 tctcgctgttgttttttacttttggcttgtgtttataattgttccatacactttatttttggttgcttaactatcccttgctccacatatcaagtttatt 39854890  T
Q  119 attggtgtga-ttttcatagaattcgcaacag 149  Q
    |||||||||| ||||||| |||||||||||||    
T  39854891 attggtgtgatttttcatcgaattcgcaacag 39854922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 148
Target Start/End: Complemental strand, 36402300 - 36402170
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| |||||||||||||||| |||||| ||||  ||||||| |||||||||| |||||||| | |||  ||||||||||||||||||||||||||||    
T  36402300 tctcgctgttgttttctacttttagcttgtgtttataattgttctatacactttgattttggttgcctgattatcccttgctccacacatcaagtttgtt 36402201  T
Q  119 attggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||| ||||||| ||||||||||||    
T  36402200 attggtgtgatttttcatcgaattcgcaaca 36402170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 39798332 - 39798468
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatca 110  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    || ||||||||||| |||||||| |||||  ||||||||||||||||||||    
T  39798332 tttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatca 39798430  T
Q  111 agtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |  ||||||||||||||| ||||||| ||||||||||||    
T  39798431 a-attgttattggtgtgatttttcatcgaattcgcaaca 39798468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 40221843 - 40221946
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||| |||| ||||||||||||||||||||||||||||||||    
T  40221843 tgttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgactatcctttgctccacacatcaagtttgttattggtgtg 40221941  T
Q  128 atttt 132  Q
    |||||    
T  40221942 atttt 40221946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 21289070 - 21289176
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||||||||||| ||||  ||| |||||||||||||||||| |||| |||||| |||||||||||||||||||||||||| |||||||    
T  21289070 cgttgttttctacttttggcttgtgtttattattcttccatacactttgtttt-ggttgcttgactatcccttgctccacacatcaagtttgatattggt 21289168  T
Q  125 gtgatttt 132  Q
    ||||||||    
T  21289169 gtgatttt 21289176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 148
Target Start/End: Complemental strand, 18511185 - 18511056
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| |||||||||||||||| |||||| ||||  |||||| ||||||||||||||| | || |||||| ||||||||||||||||||||||||||||    
T  18511185 tctcgctgttgttttctactttttgcttgtgtttataattgtttcatacactttgttttag-ttgcttgactatcccttgctccacacatcaagtttgtt 18511087  T
Q  119 attggtgtgattt-tcatagaattcgcaaca 148  Q
    |||| |||||||| |||| ||||||||||||    
T  18511086 attgatgtgatttatcatcgaattcgcaaca 18511056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 2818307 - 2818186
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||||||||| |||||| | | |||  ||||||||||||| ||||||||||||||    
T  2818307 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggatgcctgattatcccttgctccatacatcaagtttgtt 2818208  T
Q  119 attggtgtgattttcatagaat 140  Q
    ||||||||| ||||||| ||||    
T  2818207 attggtgtgtttttcatcgaat 2818186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 4410316 - 4410458
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    |||||| ||||||| || | |||||| ||||||||||||||||||||||||||    |||||||||| |  ||||||||| |||||  ||||||||||||    
T  4410316 ttctctactttgtgctcttttcgccgctgttttctacttttggcttgtatttataacttccatacacct--tttttggttgcttgattatcccttgctcc 4410413  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||||| |||||||||||||||||||||  ||||||||||||    
T  4410414 acacatcaag-ttgttattggtgtgattttcaacgaattcgcaaca 4410458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 6745375 - 6745507
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgttttt--ggtttcttgaccatcccttgctccacacatcaagtttg 116  Q
    |||||| ||||||||| ||||||||||||| ||||  |||||||||||||||||||||||  || | |||||| ||| ||||||||||||||||||||||    
T  6745375 tctcgctgttgttttcgacttttggcttgtgtttataattgttccatacactttgtttttttggctgcttgactatctcttgctccacacatcaagtttg 6745474  T
Q  117 ttattggtgtgattt-tcatagaattcgcaaca 148  Q
    ||||||||||| ||| |||| ||||||||||||    
T  6745475 ttattggtgtgttttctcatcgaattcgcaaca 6745507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 41585703 - 41585580
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||  ||| ||||| ||||||||||||||||||||||||    
T  41585703 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgattatctcttgccccacacatcaagtttgttattggt 41585605  T
Q  125 gtga-ttttcatagaattcgcaaca 148  Q
    |||| ||||||| |||||| |||||    
T  41585604 gtgatttttcatcgaattcacaaca 41585580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 16776466 - 16776577
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtatt-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtta 119  Q
    |||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||| | || | |||  || ||||||||||||||||||||||||||    
T  16776466 tctcgctgttgttttctacttttggcttgtattataattgtttcatacactttgtttt-gattgcctgattattccttgctccacacatcaagtttgtta 16776564  T
Q  120 ttggtgtgatttt 132  Q
    |||||||||||||    
T  16776565 ttggtgtgatttt 16776577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 38960092 - 38959971
Alignment:
Q  27 cgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgt 126  Q
    |||||||||||||||||||||||||||||    || ||||||||||| |||||||| |||||  |||||||||||||||||||||| |||||||||||||    
T  38960092 cgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgt 38959995  T
Q  127 ga-ttttcatagaattcgcaacag 149  Q
    || ||||||| |||||||||||||    
T  38959994 gatttttcatcgaattcgcaacag 38959971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 658323 - 658203
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||| | ||||  |||||||| ||||||||||||| |||| | |||  || |||||||||||||||||| |||||||||||||||    
T  658323 tgttttctacttttggcttatgtttattattgttccgtacactttgtttt-ggttgcctgattattccttgctccacacatcaaatttgttattggtgtg 658225  T
Q  128 attttcatagaattcgcaacag 149  Q
    |||||||| |||||||||||||    
T  658224 attttcatcgaattcgcaacag 658203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 17818455 - 17818351
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||  || ||||||||||||||||||||||||||||||||||    
T  17818455 tgttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgattattccttgctccacacatcaagtttgttattggtgtg 17818357  T
Q  128 attttc 133  Q
     |||||    
T  17818356 gttttc 17818351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 27910735 - 27910872
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatca 110  Q
    ||||||||| ||||||||||||||| ||||||| |||||||||||    ||||||||||||| |||| ||||  ||||  ||||||||||||||||||||    
T  27910735 tttgtgttcttctcgccgttgttttatacttttagcttgtatttataacttccatacactttatttt-ggttgattgattatcccttgctccacacatca 27910833  T
Q  111 agtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    | |||||||||||||||| ||||||| |||||| |||||    
T  27910834 aatttgttattggtgtgatttttcatcgaattcacaaca 27910872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 2724207 - 2724310
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||  ||||||||||  |||||||||||||||||||||||||    
T  2724207 tgttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgattatcccttgctatacacatcaagtttgttattggtgtg 2724305  T
Q  128 atttt 132  Q
    |||||    
T  2724306 atttt 2724310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 32 - 144
Target Start/End: Original strand, 21948348 - 21948464
Alignment:
Q  32 ttttctacttttggcttgtattta--attgttccatacactttgttttt-ggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga 128  Q
    ||||||||||||||||||| ||||  ||||||||||||||||| ||||| |||| |||||  |||||||||||||||||||||||||||||||||||||     
T  21948348 ttttctacttttggcttgtgtttataattgttccatacactttattttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgt 21948447  T
Q  129 ttt-tcatagaattcgc 144  Q
    ||| |||| ||||||||    
T  21948448 tttctcatcgaattcgc 21948464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 6747611 - 6747743
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgt--ttttggtttcttgaccatcccttgctccacacatcaagtttg 116  Q
    |||||| ||||||||| ||||||||||||| ||||  |||||||||||||||||||  |||||||| |||||  ||| ||||||| ||||||||||||||    
T  6747611 tctcgctgttgttttcgacttttggcttgtgtttataattgttccatacactttgtgtttttggttgcttgattatctcttgctctacacatcaagtttg 6747710  T
Q  117 ttattggtgtgattt-tcatagaattcgcaaca 148  Q
    ||||||||||| ||| ||||  |||||||||||    
T  6747711 ttattggtgtgttttctcatccaattcgcaaca 6747743  T

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Target: chr5; HSP #36
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 26098251 - 26098129
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||  || ||||||||||||||||||||||| ||||||||||    
T  26098251 tgttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgattattccttgctccacacatcaagtttgatattggtgtg 26098153  T
Q  128 a---ttttcatagaattcgcaaca 148  Q
    |   || |||| ||||||||||||    
T  26098152 agttttctcatcgaattcgcaaca 26098129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 31465954 - 31465833
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||| |||||||| ||| |  || ||||| |||||||||||| |||||||||||||||    
T  31465954 tgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcttaattattccttgttccacacatcaaatttgttattggtgtg 31465855  T
Q  128 a-ttttcatagaattcgcaaca 148  Q
    | |||||||  |||||||||||    
T  31465854 atttttcatcaaattcgcaaca 31465833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 132
Target Start/End: Complemental strand, 15354530 - 15354431
Alignment:
Q  32 ttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgattt 131  Q
    |||||||||||||||| |||||| ||| |||||||| ||||| |||||||| ||| |  |||||||||||||||||||||| ||||||||||||||||||    
T  15354530 ttttctacttttggctcgtattttattattccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattt 15354432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 132
Target Start/End: Complemental strand, 15356806 - 15356707
Alignment:
Q  32 ttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgattt 131  Q
    |||||||||||||||| |||||| ||| |||||||| ||||| |||||||| ||| |  |||||||||||||||||||||| ||||||||||||||||||    
T  15356806 ttttctacttttggctcgtattttattattccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattt 15356708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 132
Target Start/End: Original strand, 23665368 - 23665467
Alignment:
Q  32 ttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgattt 131  Q
    |||||||||||||||| |||||| ||| |||||||| ||||| |||||||| ||| |  |||||||||||||||||||||| ||||||||||||||||||    
T  23665368 ttttctacttttggctcgtattttattattccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattt 23665466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 132
Target Start/End: Complemental strand, 23741813 - 23741714
Alignment:
Q  32 ttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgattt 131  Q
    |||||||||||||||| |||||| ||| |||||||| ||||| |||||||| ||| |  |||||||||||||||||||||| ||||||||||||||||||    
T  23741813 ttttctacttttggctcgtattttattattccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattt 23741715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 132
Target Start/End: Complemental strand, 23793219 - 23793120
Alignment:
Q  32 ttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgattt 131  Q
    |||||||||||||||| |||||| ||| |||||||| ||||| |||||||| ||| |  |||||||||||||||||||||| ||||||||||||||||||    
T  23793219 ttttctacttttggctcgtattttattattccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattt 23793121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 1189571 - 1189454
Alignment:
Q  31 gttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga 128  Q
    |||||||||||||||||||| ||||  ||||||||||||| |||||||| |||  |||||  || ||||||||||||||||||||||| ||||||||||     
T  1189571 gttttctacttttggcttgtgtttataattgttccatacattttgtttt-ggtggcttgattattccttgctccacacatcaagtttgatattggtgtg- 1189474  T
Q  129 ttttcatagaattcgcaaca 148  Q
    ||||||| |||||| |||||    
T  1189473 ttttcatcgaattcacaaca 1189454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 17073192 - 17073298
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||||||||||| ||||| ||||  |||||||||||||||||||||| | || ||||| |||| ||||||||||||||||| ||| ||    
T  17073192 tctcgctgttgttttctacttttgacttgtgtttataattgttccatacactttgttttag-ttgcttgatcatcacttgctccacacatcaaatttatt 17073290  T
Q  119 attggtgt 126  Q
    ||||||||    
T  17073291 attggtgt 17073298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 20505813 - 20505687
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttg--tttttggtttcttgaccatcccttgctccacacatcaagtttgttattg 122  Q
    |||||||||||| ||||||||||| ||||  ||||||||||||||||||  ||||||||| | |||  ||  ||||||||||||||||||||||||||||    
T  20505813 cgttgttttctagttttggcttgtgtttataattgttccatacactttgattttttggttgcctgattattacttgctccacacatcaagtttgttattg 20505714  T
Q  123 gtgtgattt-tcatagaattcgcaaca 148  Q
    ||||| ||| |||| |||||| |||||    
T  20505713 gtgtgttttctcattgaattcacaaca 20505687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 31543047 - 31543153
Alignment:
Q  22 ctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttatt 121  Q
    ||||||||||||||||||||||||||||||||||    || ||||| ||||| |||||||| |||||  | |||||||||||||||||||| ||||||||    
T  31543047 ctcgccgttgttttctacttttggcttgtatttataactttcatacgctttg-ttttggttgcttgattaacccttgctccacacatcaag-ttgttatt 31543144  T
Q  122 ggtgtgatt 130  Q
    |||||||||    
T  31543145 ggtgtgatt 31543153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 36208884 - 36209007
Alignment:
Q  27 cgttgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||| |||||  ||| ||||||| ||||||||||||| |||||| |    
T  36208884 cgttgttttctacttttggcttgtgattataattgttctatacactttgtttt-ggttgcttgattatcacttgctctacacatcaagtttattattgat 36208982  T
Q  125 gtga-ttttcatagaattcgcaaca 148  Q
    |||| ||||||| |||||| |||||    
T  36208983 gtgatttttcatcgaattcacaaca 36209007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 12555881 - 12555779
Alignment:
Q  27 cgttgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||||||||||| ||| |||||||| |||||||||| |||| |||| |||||  || |||||||||||||||||| ||||||||||||    
T  12555881 cgttgttttctacttttggcttgtgattataattgtttcatacactttatttt-ggttgcttgattattccttgctccacacatcaaatttgttattggt 12555783  T
Q  125 gtga 128  Q
    ||||    
T  12555782 gtga 12555779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 34530679 - 34530559
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    |||| |||||||||| ||||| ||||  |||||||||||| ||||||||| |||| |||||  ||| ||||||| |||||||||||||||||||||||||    
T  34530679 tgttgtctacttttgacttgtgtttataattgttccatacgctttgtttt-ggttgcttgattatcacttgctcgacacatcaagtttgttattggtgtg 34530581  T
Q  128 a-ttttcatagaattcgcaaca 148  Q
    | ||||||| |||||| |||||    
T  34530580 atttttcatcgaattcacaaca 34530559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 37705747 - 37705643
Alignment:
Q  30 tgttttctacttttggcttgtattt--aattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| |||  |||| ||||||| |||||||||| |||| ||||   || ||||||||||||||||||||||||||||||||||    
T  37705747 tgttttctacttttggcttgtgtttttaattattccatatactttgtttt-ggttgcttggttattccttgctccacacatcaagtttgttattggtgtg 37705649  T
Q  128 attttc 133  Q
     |||||    
T  37705648 gttttc 37705643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 24127167 - 24127291
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||||| ||| | ||||  |||||| |||||||||||||||| |||   |||  |||||||||||||||||| |||||||||||| ||    
T  24127167 cgttgttttctacttttgacttatgtttataattgtttcatacactttgttttttgttgtctgattatcccttgctccacacattaagtttgttatttgt 24127266  T
Q  125 gtga-ttttcatagaattcgcaaca 148  Q
    |||| ||||||| |||||| |||||    
T  24127267 gtgatttttcatcgaattcacaaca 24127291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 18509291 - 18509201
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtatt--taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatca 110  Q
    |||||| ||||||||||||||||||||||| ||  |||||||| ||||||||||| ||||||||  ||||| ||||||||||||||||||||    
T  18509291 tctcgctgttgttttctacttttggcttgtgtttataattgtttcatacactttg-ttttggttgtttgactatcccttgctccacacatca 18509201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 20045297 - 20045395
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    ||||||||| |||||||||||||| ||||  |||||||||||||||||||||| |||| |||||  |||  ||||| |||||||||||||||||||||||    
T  20045297 cgttgttttttacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgattatcatttgcttcacacatcaagtttgttattggt 20045395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 111
Target Start/End: Original strand, 26098045 - 26098127
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaa 111  Q
    |||||||||||||||||| || ||||  |||||||||||||||||||||| |||| |||||| |||||||||||||||||||||    
T  26098045 tgttttctacttttggctagtgtttataattgttccatacactttgtttt-ggttgcttgactatcccttgctccacacatcaa 26098127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 16092164 - 16092069
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtg 125  Q
    ||||||||||||||||||||  ||||  ||||||||||| |||||||||  |||| |||||| |||| |||||||||| |||||||||||||||||||    
T  16092164 tgttttctacttttggcttgcgtttacaattgttccatatactttgttt--ggttgcttgactatccattgctccacatatcaagtttgttattggtg 16092069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 28 - 133
Target Start/End: Original strand, 696187 - 696293
Alignment:
Q  28 gttgttttctacttttggct-tgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgt 126  Q
    |||||||||||||||||  | ||| | ||| ||||||||||||||| |||| | ||||||||  ||| ||||||||||||||||||| |||||||||| |    
T  696187 gttgttttctacttttgtttgtgtttataactgttccatacactttattttggttttcttgattatctcttgctccacacatcaagtctgttattggtat 696286  T
Q  127 gattttc 133  Q
    |||||||    
T  696287 gattttc 696293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 30 - 147
Target Start/End: Original strand, 6756806 - 6756926
Alignment:
Q  30 tgttttctacttttggcttgtatt--taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaag-tttgttattggtgt 126  Q
    ||||||||||||||||||||| ||  |||||||| ||||||||||| ||||| || | |||  ||| |||||||||||||||||| ||||||||||||||    
T  6756806 tgttttctacttttggcttgtgtttataattgtttcatacactttg-ttttgattgcctgattatcacttgctccacacatcaagttttgttattggtgt 6756904  T
Q  127 gattt-tcatagaattcgcaac 147  Q
    | ||| |||| |||||||||||    
T  6756905 gttttctcatcgaattcgcaac 6756926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 33 - 132
Target Start/End: Complemental strand, 10474285 - 10474185
Alignment:
Q  33 tttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgatt 130  Q
    ||||||||||| |||||| ||||  |||||||||||||||||||||| |||| |||||  || |||||||||||||||||||||| |||||| ||| |||    
T  10474285 tttctacttttcgcttgtgtttataattgttccatacactttgtttt-ggttacttgattattccttgctccacacatcaagtttattattgatgtaatt 10474187  T
Q  131 tt 132  Q
    ||    
T  10474186 tt 10474185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 15552543 - 15552667
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||||||||| ||||||| || |||||||||||| |||||||||||    || ||||||||||| |||| ||| |||||  ||||||| || |||     
T  15552543 tcttctttgtgttcttctcgccattattttctacttttagcttgtatttataactttcatacactttg-ttttagttgcttgattatcccttacttcacg 15552641  T
Q  106 catcaagtttgttattggtgtgatttt 132  Q
    ||||||| |||||||||||||||||||    
T  15552642 catcaag-ttgttattggtgtgatttt 15552667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 18596959 - 18597079
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||| ||||| ||||  ||||||||||||||||| |||| | | ||| ||  ||| ||||||||| |||||||||||||||||||||||    
T  18596959 tgttttctacttttgacttgtgtttataattgttccatacactttattttggatgtct-gattatcacttgctccatacatcaagtttgttattggtgtg 18597057  T
Q  128 a-ttttcatagaattcgcaaca 148  Q
    | ||||||| ||||| ||||||    
T  18597058 atttttcatcgaatttgcaaca 18597079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 127
Target Start/End: Original strand, 2954728 - 2954827
Alignment:
Q  30 tgttttctacttttggcttgtatt---taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgt 126  Q
    ||||||||||||||||||||| ||   |||||||||||||||||||||||| | | ||| ||  ||| ||| ||||||||||||| ||||||||||||||    
T  2954728 tgttttctacttttggcttgtgttacataattgttccatacactttgttttggttgtct-gattatcacttactccacacatcaaatttgttattggtgt 2954826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 25904417 - 25904536
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    |||||||||||||||| |||| ||||  |||||||||||||||||| ||||  || |||||| ||||||||| ||||||||||| ||| ||| |||||||    
T  25904417 tgttttctacttttggtttgtgtttataattgttccatacactttg-ttttcattgcttgactatcccttgcaccacacatcaaatttatta-tggtgtg 25904514  T
Q  128 attt-tcatagaattcgcaaca 148  Q
     ||| |||| ||||||||||||    
T  25904515 ttttctcatcgaattcgcaaca 25904536  T

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Target: chr5; HSP #63
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 127
Target Start/End: Original strand, 20043303 - 20043402
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgacc-atcccttgctccacacatcaagtttgttattggtgt 126  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||| || | |||||   ||| ||||||||||| |||||||||||||||| |||    
T  20043303 tgttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggctgcttgatttatcacttgctccacaaatcaagtttgttattgatgt 20043401  T

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Target: chr5; HSP #64
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 31545381 - 31545502
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||    || ||||| ||||  ||||  || |||||  | ||||| |||||||    
T  31545381 tcttcttt-tgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacgcttt-attttaattgcttgattaacccttactccaca 31545478  T
Q  106 catcaagtttgttattggtgtgatt 130  Q
    ||||||| |||||||||||||||||    
T  31545479 catcaag-ttgttattggtgtgatt 31545502  T

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Target: chr5; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 23667644 - 23667725
Alignment:
Q  33 tttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtt 114  Q
    ||||||||||||||| |||||||||  |||||||| |||||  ||||||| ||| || |||||| || ||||||||||||||    
T  23667644 tttctacttttggctcgtatttaatcattccatacgctttgagtttggttgcttaactatccctcgccccacacatcaagtt 23667725  T

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Target: chr5; HSP #66
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 147
Target Start/End: Complemental strand, 6661156 - 6661038
Alignment:
Q  27 cgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgt 126  Q
    |||||||||||||||||| ||||| ||||    ||||||||||||| |||| |||| |||||  ||  ||||||||||||||||| | | | ||||||||    
T  6661156 cgttgttttctacttttg-cttgtgtttataacttccatacactttatttt-ggttgcttgattattacttgctccacacatcaaatatttaattggtgt 6661059  T
Q  127 gattttcatagaattcgcaac 147  Q
    ||||||||| |||||| ||||    
T  6661058 gattttcatcgaattcacaac 6661038  T

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Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 20054182 - 20054267
Alignment:
Q  63 catacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgattttcatagaattcgcaacag 149  Q
    ||||||||||||||| |||| |||||  ||  ||||||| ||||||||||| | ||||| |||||||||| || |||||| ||||||    
T  20054182 catacactttgtttt-ggttgcttgattattacttgctctacacatcaagtattttattagtgtgatttttatcgaattcacaacag 20054267  T

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Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 39397970 - 39397875
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||  ||||  |||||| ||||||||||||||| |     ||| |||   |||||||||||| |||||||||| |||||||||    
T  39397970 tgttttctacttttggcttgagtttataattgtttcatacactttgttttgg-----ttgtcca---cttgctccacacgtcaagtttgtaattggtgtg 39397879  T

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Target: chr3 (Bit Score: 114; Significance: 9e-58; HSPs: 90)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 1321753 - 1321897
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||  ||||||||||||    
T  1321753 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcctgattatcccttgctcc 1321851  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  1321852 acacatcaagtttgttattggtgtgattttcatcgaattcgcaaca 1321897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 11168375 - 11168519
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||||||||||||    
T  11168375 ttctcttctttttgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcttgattatcccttgctcc 11168474  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||    
T  11168475 acacatcaag-ttgttattggtgtgattttcatcgaattcgcaaca 11168519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 10956010 - 10955867
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||||||||||||    
T  10956010 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatcccttgctcc 10955912  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||||| |||||||||||||||||||||| |||||| |||||    
T  10955911 acacatcaag-ttgttattggtgtgattttcatcgaattcacaaca 10955867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 3 - 146
Target Start/End: Original strand, 5191925 - 5192066
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||||||||||||    
T  5191925 ttctcttctttgtgttcttctcgccattgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatcccttgctcc 5192023  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaa 146  Q
    |||||||||| |||||||||||||||||||||| ||||||||||    
T  5192024 acacatcaag-ttgttattggtgtgattttcatcgaattcgcaa 5192066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 10084372 - 10084228
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||  ||||||||||||    
T  10084372 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgtcccatacactttg-ttttggttgcttgattatcccttgctcc 10084274  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaacag 149  Q
    |||||||||| |||||||||||||||||||||| | |||||||||||    
T  10084273 acacatcaag-ttgttattggtgtgattttcatcggattcgcaacag 10084228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 10191295 - 10191151
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||  ||||||||||||    
T  10191295 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgtcccatacactttg-ttttggttgcttgattatcccttgctcc 10191197  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaacag 149  Q
    |||||||||| ||||||||||||||||||||||   |||||||||||    
T  10191196 acacatcaag-ttgttattggtgtgattttcatcagattcgcaacag 10191151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 10958306 - 10958163
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||  ||| ||||||||    
T  10958306 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttctatacactttg-ttttggttgcttgattatctcttgctcc 10958208  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||||| |||||||||||||||||||||| |||||| |||||    
T  10958207 acacatcaag-ttgttattggtgtgattttcatcgaattcacaaca 10958163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 38890314 - 38890441
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||  ||||||||||||    
T  38890314 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 38890413  T
Q  103 acacatcaagtttgttattggtgtgattt 131  Q
    |||||||||| ||||||||||||||||||    
T  38890414 acacatcaag-ttgttattggtgtgattt 38890441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 51726990 - 51726847
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||  ||  ||||| ||    
T  51726990 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcctgattat-tcttgcccc 51726892  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||    
T  51726891 acacatcaag-ttgttattggtgtgattttcatcgaattcgcaaca 51726847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 5522610 - 5522466
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    || | ||||||||| |||||||| |||||| ||||||||||||    
T  5522610 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcttacactttgattttggttgcttgactatcccttgctcc 5522511  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||||| |||||||||||||||||||||  ||||||||||||    
T  5522510 acacatcaag-ttgttattggtgtgattttcaacgaattcgcaaca 5522466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 25533707 - 25533842
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatca 110  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||| ||||||||||||||||    
T  25533707 tttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttga-tatctcttgctccacacatca 25533804  T
Q  111 agtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    || ||||||||||||||| ||||||| ||||||||||||    
T  25533805 ag-ttgttattggtgtgatttttcatcgaattcgcaaca 25533842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 38210647 - 38210789
Alignment:
Q  5 ctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccac 104  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| ||  ||||  ||||||||||||||    
T  38210647 ctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattattccatacgctttg-ttttgtttgtttgataatcccttgctccac 38210745  T
Q  105 acatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||| ||||||||||||||| ||||||| |||||| |||||    
T  38210746 acatcaag-ttgttattggtgtgatttttcatcgaattcacaaca 38210789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 42990591 - 42990717
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttat 120  Q
    |||||||||||||||||||||||||||||||||||    || ||||||||||||||| |||| | |||  ||||||||||||||||||||||||||||||    
T  42990591 tctcgccgttgttttctacttttggcttgtatttataacttacatacactttgtttt-ggttgcctgattatcccttgctccacacatcaagtttgttat 42990689  T
Q  121 tggtgtgattttcatagaattcgcaaca 148  Q
    ||||||||||||||| ||||||||||||    
T  42990690 tggtgtgattttcatcgaattcgcaaca 42990717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 456185 - 456325
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    || ||||| ||||| |||||||| |||||  |||||||||||||||    
T  456185 tcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacgctttg-ttttggttgcttgattatcccttgctccaca 456283  T
Q  106 catcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    ||||||| |||||||||||||||||||||| |||||| |||||    
T  456284 catcaag-ttgttattggtgtgattttcatcgaattcacaaca 456325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 458562 - 458702
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    || ||||| ||||| |||||||| |||||  |||||||||||||||    
T  458562 tcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacgctttg-ttttggttgcttgattatcccttgctccaca 458660  T
Q  106 catcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    ||||||| |||||||||||||||||||||| |||||| |||||    
T  458661 catcaag-ttgttattggtgtgattttcatcgaattcacaaca 458702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 7 - 148
Target Start/End: Complemental strand, 6065774 - 6065633
Alignment:
Q  7 cttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacac 106  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||    || ||||||||||| |||||||| ||| |  ||||||||||||||||    
T  6065774 cttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgattttggttgcttaattatcccttgctccacac 6065675  T
Q  107 atcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||| ||||||||||||||| ||||||| ||||||||||||    
T  6065674 atcaag-ttgttattggtgtgatttttcatcgaattcgcaaca 6065633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 11 - 148
Target Start/End: Complemental strand, 7606580 - 7606443
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctactttt-ggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatc 109  Q
    ||||||||| |||||| |||||||||||||||| ||| |||||||||||||||||||||||||| |||||||| |||||| ||| |||||||||||||||    
T  7606580 tttgtgttcttctcgctgttgttttctactttttggcctgtatttaattgttccatacactttgattttggttgcttgactatctcttgctccacacatc 7606481  T
Q  110 aagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    ||| |||||||||||||  ||||||| ||||| ||||||    
T  7606480 aag-ttgttattggtgtatttttcatcgaatttgcaaca 7606443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 6 - 133
Target Start/End: Complemental strand, 53894036 - 53893909
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgtttt-ctacttttggctt-gtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcca 103  Q
    |||||||||||||| ||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||| |||| |||||  |||||||||||||    
T  53894036 tcttctttgtgttcttctcgccgttgtttttctacttttggctttgtatttaattattccatacactttgtttt-ggttgcttgattatcccttgctcca 53893938  T
Q  104 cacatcaagtttgttattggtgtgattttc 133  Q
    ||||||||| ||||||||||||||||||||    
T  53893937 cacatcaag-ttgttattggtgtgattttc 53893909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 747035 - 747177
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||    || ||||||||||| |||||||| |||||  |||||||||||||||    
T  747035 tcttctttgtgttcttctcgcagttgttttctacttttggcttgtatttataactttcatacactttgattttggttgcttgattatcccttgctccaca 747134  T
Q  106 catcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    ||||||| ||||||||||||||| ||||||| |||||| |||||    
T  747135 catcaag-ttgttattggtgtgatttttcatcgaattcacaaca 747177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 1313698 - 1313822
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||||| ||||| ||||  |||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||    
T  1313698 cgttgttttctacttttgacttgtgtttataattgttccatacactttgtttt-ggttgcttgactatcccttgctccacacatcaagtttgttattggt 1313796  T
Q  125 gtga--ttttcatagaattcgcaaca 148  Q
    ||||  ||||||| ||||||||||||    
T  1313797 gtgagtttttcatcgaattcgcaaca 1313822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 29 - 148
Target Start/End: Original strand, 11170670 - 11170788
Alignment:
Q  29 ttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga 128  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||  ||||||| |||||||||||||| ||||||||  |||||    
T  11170670 ttgttttctacttttggcttgtatttaattattccatacactttgattttggttgcttgattatcccttactccacacatcaag-ttgttattaatgtga 11170768  T
Q  129 ttttcatagaattcgcaaca 148  Q
    ||||||| ||||||||||||    
T  11170769 ttttcatcgaattcgcaaca 11170788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 21 - 148
Target Start/End: Complemental strand, 18096870 - 18096740
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||| | |||  ||||||||||||||||||||||||||||    
T  18096870 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaagtttgtt 18096771  T
Q  119 attggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||| | ||||||| ||||||||||||    
T  18096770 attggtgtaatttttcatcgaattcgcaaca 18096740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 21 - 148
Target Start/End: Complemental strand, 18099140 - 18099010
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||||||||| |||| ||| |||||  ||||||||||||||||||||||||||||    
T  18099140 tctcgctgttgttttctacttttggcttgtgtttacaattgttccatacactttgatttttgttgcttgattatcccttgctccacacatcaagtttgtt 18099041  T
Q  119 attggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||| ||||||| |||||| |||||    
T  18099040 attggtgtgatttttcatcgaattcccaaca 18099010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 3 - 153
Target Start/End: Complemental strand, 4103879 - 4103731
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||| |||||||| | ||||||||    ||||||||||||| |||| ||||  ||||| |||| |||||||    
T  4103879 ttctcttctttgtgttcttctcgccgttgttttttacttttgacatgtatttataacttccatacacttt-ttttcggttgtttgactatcc-ttgctcc 4103782  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaacaggaat 153  Q
    || |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  4103781 acgcatcaagtttgttattggtgtgattttcatcgaattcgcaacatgaat 4103731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 22114288 - 22114143
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctc 101  Q
    ||||||| ||||||||| |||||||||| |||| ||||||||||||||||||||    || ||||||||||| |||||||| |||||  |||||||||||    
T  22114288 ttctcttttttgtgttcttctcgccgttttttttctacttttggcttgtatttataactttcatacactttgattttggttgcttgattatcccttgctc 22114189  T
Q  102 cacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    ||||||||||| ||| |||||||||||||||||| ||||||||||||    
T  22114188 cacacatcaag-ttgctattggtgtgattttcatcgaattcgcaaca 22114143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 32219372 - 32219485
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||| |||||  ||||||||||||||||||||||||||||    
T  32219372 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcttgattatcccttgctccacacatcaagtttgtt 32219471  T
Q  119 attggtgtgatttt 132  Q
    ||| ||||||||||    
T  32219472 atttgtgtgatttt 32219485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 10621509 - 10621366
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacacttt-gtttttggtttcttgaccatcccttgctccac 104  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    || |||||||||| |||||||||| ||| |  ||||||||||||||    
T  10621509 tcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttggtttttggttgcttaattatcccttgctccac 10621410  T
Q  105 acatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||| ||||||||||||||| ||||||| |||||| |||||    
T  10621409 acatcaag-ttgttattggtgtgatttttcatcgaattcacaaca 10621366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 21 - 149
Target Start/End: Complemental strand, 53915467 - 53915337
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||||||||||||||||| ||||  |||||| ||||||||| ||||| |||| |||||| ||||||||||||| ||||||||||||||    
T  53915467 tctcgctgttgttttctacttttggcttgtgtttataattgtttcatacacttggtttt-ggttgcttgactatcccttgctccatacatcaagtttgtt 53915369  T
Q  119 attggtgtga-ttttcatagaattcgcaacag 149  Q
    |||||||||| ||||||| |||||||||||||    
T  53915368 attggtgtgatttttcatcgaattcgcaacag 53915337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 25389179 - 25389308
Alignment:
Q  3 ttctcttcttt-gtgttcatctcgccgttgttttctactttt-ggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgct 100  Q
    ||||||||||| || ||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||| |||||  ||||||||||    
T  25389179 ttctcttcttttgtattcttctcgccgttgttttctactttttggcttgtatttaattattccatacactttg-ttttggttgcttgattatcccttgct 25389277  T
Q  101 ccacacatcaagtttgttattggtgtgatttt 132  Q
    |||||||||||| ||||||||||| |||||||    
T  25389278 ccacacatcaag-ttgttattggtatgatttt 25389308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 50494277 - 50494417
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||| ||| |  ||| |||||||||||    
T  50494277 tcttcttt-tgttcttctcgccgttgttttctacttttggcttgtatttaattattccatacgctttg-ttttggttgcttaattatctcttgctccaca 50494374  T
Q  106 catcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    ||||||| ||||||||||||||| ||||||| |||||| |||||    
T  50494375 catcaag-ttgttattggtgtgatttttcatcgaattcacaaca 50494417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 148
Target Start/End: Complemental strand, 53917635 - 53917506
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||||||||||||||||| ||||  |||||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||    
T  53917635 tctcgctgttgttttctacttttggcttgtgtttataattgtttcatacactttgtttt-ggttgcttgactatcccttgctccacacatcaagtttgtt 53917537  T
Q  119 attggtgtga-ttttcatagaattcgcaaca 148  Q
    ||| |||||| ||||||| || |||||||||    
T  53917536 attagtgtgatttttcatcgatttcgcaaca 53917506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 43423428 - 43423308
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||| ||||||||||||||||||||| ||||||||||||||     
T  43423428 tgttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgactatcccttgctccacacatcaactttgttattggtgta 43423330  T
Q  128 a-ttttcatagaattcgcaaca 148  Q
    | ||||||| ||||||||||||    
T  43423329 atttttcatcgaattcgcaaca 43423308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 41849351 - 41849470
Alignment:
Q  27 cgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgt 126  Q
    |||||||||||||||||||||||||||||    || ||||||||||||||| |||| |||||  |||||||||||||||||||||||| |||||||||||    
T  41849351 cgttgttttctacttttggcttgtatttataactttcatacactttgtttt-ggttgcttgattatcccttgctccacacatcaagtt-gttattggtgt 41849448  T
Q  127 gattttcatagaattcgcaaca 148  Q
    ||||||||| ||||||||||||    
T  41849449 gattttcatcgaattcgcaaca 41849470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 36012114 - 36012243
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| |||||||||||||||| |||||| ||||  |||||||||||||||||||||| ||||  ||||  ||||||||||||| ||||||||||||||    
T  36012114 tctcgctgttgttttctacttttcgcttgtgtttataattgttccatacactttgtttt-ggttgtttgattatcccttgctccatacatcaagtttgtt 36012212  T
Q  119 attggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||| ||||||| ||||||||||||    
T  36012213 attggtgtgatttttcatcgaattcgcaaca 36012243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 3314979 - 3315100
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    |||||||||| |||||||||| ||||  |||||||||||||||||| |||||||| |||||  ||||||||||||||||||||||||| |||||||||||    
T  3314979 tgttttctacgtttggcttgtgtttataattgttccatacactttgcttttggttgcttgattatcccttgctccacacatcaagtttattattggtgtg 3315078  T
Q  128 attt-tcatagaattcgcaaca 148  Q
     ||| |||| ||||||||||||    
T  3315079 ttttctcatcgaattcgcaaca 3315100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 3859792 - 3859908
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctacttttggcttgta-tttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatc 109  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||| ||| || |||||||  ||||||||||    
T  3859792 tttgtgttcttctcgccgttgttttctacttttggcttgtattttaattgtttcatacactttg-ttttggttgcttaactatcccttattccacacatc 3859890  T
Q  110 aagtttgttattggtgtga 128  Q
    ||| |||||||||||||||    
T  3859891 aag-ttgttattggtgtga 3859908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 7 - 148
Target Start/End: Complemental strand, 6063424 - 6063283
Alignment:
Q  7 cttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacac 106  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||    || ||||| ||||| |||||||| ||| |  |||||||| |||||||    
T  6063424 cttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacgctttgattttggttgcttaattatcccttgttccacac 6063325  T
Q  107 atcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||| ||||||| ||||||| ||||||| ||||||||||||    
T  6063324 atcaag-ttgttatcggtgtgatttttcatcgaattcgcaaca 6063283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 27635618 - 27635514
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||  || ||||||||||||||||||||||||||||||||||    
T  27635618 tgttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgattattccttgctccacacatcaagtttgttattggtgtg 27635520  T
Q  128 attttc 133  Q
    ||||||    
T  27635519 attttc 27635514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 32 - 149
Target Start/End: Original strand, 24980007 - 24980127
Alignment:
Q  32 ttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgat 129  Q
    ||||||||||||||||||| ||||  |||||||||||||||||| |||||||| | |||  ||||||||||||||||||||||||||||||||||||| |    
T  24980007 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgtt 24980106  T
Q  130 tt-tcatagaattcgcaacag 149  Q
    || |||| |||||| ||||||    
T  24980107 ttctcatcgaattcacaacag 24980127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 45883237 - 45883357
Alignment:
Q  30 tgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    |||||||||||| |||||||| ||| |||||||||||||||||||||||| |||| ||| || |||||||||||||||||||||||||||||||||||||    
T  45883237 tgttttctacttctggcttgtgattataattgttccatacactttgtttt-ggttgcttaactatcccttgctccacacatcaagtttgttattggtgtg 45883335  T
Q  128 a-ttttcatagaattcgcaaca 148  Q
    | ||||||| ||||| ||||||    
T  45883336 atttttcatcgaatttgcaaca 45883357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 43228578 - 43228687
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgta-tttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtta 119  Q
    |||||| ||||||||||| |||||||||||| |||||||||||||||||||||| |||||||| |||||  ||| |||||||||||||||||| ||||||    
T  43228578 tctcgctgttgttttctaattttggcttgtattttaattgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgtta 43228675  T
Q  120 ttggtgtgattt 131  Q
    ||||||||||||    
T  43228676 ttggtgtgattt 43228687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 43421380 - 43421260
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    |||||| |||||||||||||| ||||  |||||||||||||||||||||| |||| |||||| ||  ||||||||||||||||| |||||||||||||||    
T  43421380 tgttttatacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgactatatcttgctccacacatcaactttgttattggtgtg 43421282  T
Q  128 a-ttttcatagaattcgcaaca 148  Q
    | ||||||| ||||||||||||    
T  43421281 atttttcatcgaattcgcaaca 43421260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 12267942 - 12267836
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||| || || ||||||||||||||| ||||||||||||    
T  12267942 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgactattccctgctccacacatcaaatttgttattggt 12267844  T
Q  125 gtgatttt 132  Q
    || |||||    
T  12267843 gtaatttt 12267836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 26720821 - 26720928
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||| |||| ||||||||||||||||||||||||    |||||||||||||| |||||||| |||||  ||||||||||||    
T  26720821 ttctcttctttgtgttcttctcgtcgttcttttctacttttggcttgtatttataacttccatacactttg-ttttggttgcttgattatcccttgctcc 26720919  T
Q  103 acacatcaa 111  Q
    |||||||||    
T  26720920 acacatcaa 26720928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 28413010 - 28412870
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||    || |||||||||   |||||||| |||||  |||||||||||||||    
T  28413010 tcttctttgtgttcttctcgccgttgttttctacttttgacttgtatttataactttcatacactt--gttttggttacttgattatcccttgctccaca 28412913  T
Q  106 catcaagtttgttattggtgtg-attttcatagaattcgcaaca 148  Q
    ||||||| ||||||||||||||  ||||||| |||||| |||||    
T  28412912 catcaag-ttgttattggtgtgttttttcatcgaattcacaaca 28412870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 43226381 - 43226495
Alignment:
Q  33 tttctacttttggcttgtattt-aattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgattt 131  Q
    |||||||||||||||||||||| |||||||||||||||||   |||||||| |||||  ||| |||||||||||||||||| ||||||||||||||||||    
T  43226381 tttctacttttggcttgtattttaattgttccatacacttg--ttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtgattt 43226477  T
Q  132 -tcatagaattcgcaaca 148  Q
     |||| ||||||||||||    
T  43226478 ctcatcgaattcgcaaca 43226495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 51943667 - 51943758
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttat 120  Q
    ||||||||||||||||||||| ||||  ||||||||| |||||||||||| |||| |||||| ||||||||||||||||||||||||||||||    
T  51943667 tgttttctacttttggcttgtgtttataattgttccaaacactttgtttt-ggttgcttgactatcccttgctccacacatcaagtttgttat 51943758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 148
Target Start/End: Complemental strand, 4308251 - 4308122
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||  | ||  || ||||||||||||||||||| |||||    
T  4308251 tctcgctgttgttttctacttttggcttgtgattataattgttccatacactttgtttt-ggttgttggattattccttgctccacacatcaag-ttgtt 4308154  T
Q  119 attggtgtg--attttcatagaattcgcaaca 148  Q
    |||||||||  |||||||| ||||||||||||    
T  4308153 attggtgtgatattttcatcgaattcgcaaca 4308122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 31 - 132
Target Start/End: Original strand, 18162960 - 18163063
Alignment:
Q  31 gttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga 128  Q
    |||||||||||||||||||| ||||  |||||||||||||||||| |||||||| | |||  ||||||| ||||||||||||| ||| ||||||||||||    
T  18162960 gttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttactccacacatcaaatttattattggtgtga 18163059  T
Q  129 tttt 132  Q
    ||||    
T  18163060 tttt 18163063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 1626649 - 1626525
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||  ||||||| ||||| ||||  |||||||||||||||||||||||| || |||||  || |||||||||||||||||||||||||||||||    
T  1626649 cgttgtttttcacttttgacttgtgtttataattgttccatacactttgtttttg-ttgcttgattattccttgctccacacatcaagtttgttattggt 1626551  T
Q  125 gtgattttc--atagaattcgcaaca 148  Q
    ||| |||||  || ||||||||||||    
T  1626550 gtggttttcttatggaattcgcaaca 1626525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 6484652 - 6484756
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||| ||||| ||||  |||||||||||||||||| |||||||| ||| |  || |||||||||||||||||| ||||||||| |||||    
T  6484652 tgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcttaattattccttgctccacacatcaaatttgttattagtgtg 6484751  T
Q  128 atttt 132  Q
    |||||    
T  6484752 atttt 6484756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 128
Target Start/End: Complemental strand, 25688121 - 25688021
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||| ||||||||   |||  ||| |||||||||||||| ||||||||||||||||||    
T  25688121 tgttttctacttttggcttgtgtttacaattgttccatacactttgattttggttgtctgattatcacttgctccacacataaagtttgttattggtgtg 25688022  T
Q  128 a 128  Q
    |    
T  25688021 a 25688021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 28181298 - 28181400
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||| ||||  ||||   ||| ||||||||||||||||||||||||||||||||    
T  28181298 tgttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgtttgattgtcc-ttgctccacacatcaagtttgttattggtgtg 28181395  T
Q  128 atttt 132  Q
    |||||    
T  28181396 atttt 28181400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 28101965 - 28101848
Alignment:
Q  30 tgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga- 128  Q
    |||||||||||||||| |||| |||||||| |  || ||||||| |||||||| |||||  ||||||||||||||||||||||||| |||||||||| |     
T  28101965 tgttttctacttttgggttgtgtttaattgct--atccactttgattttggttgcttgattatcccttgctccacacatcaagtttattattggtgtaat 28101868  T
Q  129 ttttcatagaattcgcaaca 148  Q
    ||||||| |||||| |||||    
T  28101867 ttttcatcgaattcacaaca 28101848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 82
Target Start/End: Complemental strand, 35919107 - 35919035
Alignment:
Q  11 tttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacactttgtttttggtt 82  Q
    ||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||    
T  35919107 tttgtgttcttctcgccgttgtttttctacttttggcttctatttaattgttccatacactttgattttggtt 35919035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 5886496 - 5886599
Alignment:
Q  28 gttgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtg 125  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||||  |||| ||||   |||||||||||||||||||||| ||||||||||||    
T  5886496 gttgttttctacttttggcttgtgattataactgttccatacactttgttt--ggttgcttgtttatcccttgctccacacatcaag-ttgttattggtg 5886592  T
Q  126 tgatttt 132  Q
    |||||||    
T  5886593 tgatttt 5886599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 5899969 - 5900072
Alignment:
Q  28 gttgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtg 125  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||||  |||| ||||   |||||||||||||||||||||| ||||||||||||    
T  5899969 gttgttttctacttttggcttgtgattataactgttccatacactttgttt--ggttgcttgtttatcccttgctccacacatcaag-ttgttattggtg 5900065  T
Q  126 tgatttt 132  Q
    |||||||    
T  5900066 tgatttt 5900072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 21 - 149
Target Start/End: Complemental strand, 9604575 - 9604446
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||||| ||||||| ||| ||| |||||||| ||||||||||| ||| |||| |||||  || ||||||||||||||||||| |||||    
T  9604575 tctcgctgttgttttctatttttggcctgtgattataattgtttcatacactttggttt-ggttacttgattattccttgctccacacatcaag-ttgtt 9604478  T
Q  119 attggtgtga-ttttcatagaattcgcaacag 149  Q
    |||||||||| ||||||| |||||||||||||    
T  9604477 attggtgtgatttttcatcgaattcgcaacag 9604446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 32264001 - 32263898
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||| | | ||| ||  ||| ||||||||||||||||| ||||||||| |||||    
T  32264001 tgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgtct-gattatcacttgctccacacatcaaatttgttattagtgtg 32263903  T
Q  128 atttt 132  Q
    |||||    
T  32263902 atttt 32263898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 880416 - 880313
Alignment:
Q  30 tgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    |||||||||||||||| |||| ||| ||| |||||||||||||||||||| |||| |||||  |  ||||||||||||||||||||||||||| ||||||    
T  880416 tgttttctacttttggtttgtgattataactgttccatacactttgtttt-ggttgcttgattaatccttgctccacacatcaagtttgttatgggtgtg 880318  T
Q  128 atttt 132  Q
    |||||    
T  880317 atttt 880313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 149
Target Start/End: Original strand, 3307054 - 3307177
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaag-tttgttattggtgt 126  Q
    ||||||||||||||||||||| ||||  |||||| ||||||||||||||||| ||  ||||  |||||||||| || |||||||| ||||||||||||||    
T  3307054 tgttttctacttttggcttgtgtttataattgtttcatacactttgtttttgattgtttgattatcccttgcttcatacatcaagttttgttattggtgt 3307153  T
Q  127 gattt-tcatagaattcgcaacag 149  Q
    | ||| |||| |||||| ||||||    
T  3307154 gttttctcatcgaattcacaacag 3307177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 42992673 - 42992799
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttat 120  Q
    ||||||| ||||||||| |||||| | | ||||||    |||||||||||||||||| | | ||| ||  ||||||||||| ||||||||||||||||||    
T  42992673 tctcgccattgttttctgcttttgacatatatttataacttccatacactttgttttggttgtct-gattatcccttgctctacacatcaagtttgttat 42992771  T
Q  121 tggtgtgattttcatagaattcgcaaca 148  Q
    | ||||||||||||| |||||| |||||    
T  42992772 tagtgtgattttcatcgaattcacaaca 42992799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 27 - 149
Target Start/End: Original strand, 15781170 - 15781294
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||||| ||||| ||||  | ||||||||||||||| |||| |  | |||||  ||||||| ||||||||||||||||||||||||||    
T  15781170 cgttgttttctacttttgacttgtgtttataactgttccatacactttatttt-gcctgcttgattatcccttactccacacatcaagtttgttattggt 15781268  T
Q  125 gtgatttt-catagaattcgcaacag 149  Q
    ||| |||| ||| |||||| ||||||    
T  15781269 gtgtttttccatcgaattcacaacag 15781294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 27 - 142
Target Start/End: Complemental strand, 5926731 - 5926615
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||||| ||||| ||||  |||||||| ||||||||||||| |||| |||||  || |||| || ||||||| |||||||||||||||    
T  5926731 cgttgttttctacttttg-cttgtgtttataattgttccttacactttgtttt-ggttacttgattattccttacttcacacatgaagtttgttattggt 5926634  T
Q  125 gtga-ttttcatagaattc 142  Q
    |||| ||||||| ||||||    
T  5926633 gtgagttttcatcgaattc 5926615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 27101144 - 27101043
Alignment:
Q  28 gttgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtg 125  Q
    |||||||||||||||| |||||| ||| |||||||||||||||||||| |||||||| | |||  || | ||||||||||||||||| ||||||||||||    
T  27101144 gttgttttctactttttgcttgtgattataattgttccatacactttg-ttttggttgcctgattattcattgctccacacatcaag-ttgttattggtg 27101047  T
Q  126 tgat 129  Q
    ||||    
T  27101046 tgat 27101043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 39715760 - 39715858
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttg-gtttcttgaccatcccttgctccacacatcaagtttgttattggtg 125  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||| |||||  ||| || ||| ||||||| ||  |||||||||||||||||||||||    
T  39715760 tgttttctacttttggcttgtgtttataattgttccatacactttatttttttgttactagactatcccttactgtacacatcaagtttgttattggtg 39715858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 29 - 146
Target Start/End: Complemental strand, 47701638 - 47701522
Alignment:
Q  29 ttgttttctacttttggcttgtatt--taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgt 126  Q
    |||||||||||||||||||||| ||  |||||||||||||||||||| |||| ||| |||||  ||  |||| |   |||||||||||||||||||||||    
T  47701638 ttgttttctacttttggcttgtgttcataattgttccatacactttg-ttttcgttgcttgattattacttgat---cacatcaagtttgttattggtgt 47701543  T
Q  127 ga-ttttcatagaattcgcaa 146  Q
    || ||||||| ||||||||||    
T  47701542 gatttttcatcgaattcgcaa 47701522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 51674729 - 51674625
Alignment:
Q  30 tgttttctacttttggcttgtatttaa--ttgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| ||||   ||||||||||| |  | | ||||||| |||||  || |||||||||| |||||||||||||||||||||||    
T  51674729 tgttttctacttttggcttgtgtttatatttgttccatacccact-tgtttggttgcttgattattccttgctccatacatcaagtttgttattggtgtg 51674631  T
Q  128 attttc 133  Q
    ||||||    
T  51674630 attttc 51674625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 133
Target Start/End: Complemental strand, 53468414 - 53468312
Alignment:
Q  32 ttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgat 129  Q
    ||||||||||||| ||||| ||||  |||||||||||||||||||||| || | ||  |  || | |||||||||||||||||||||||||||||||| |    
T  53468414 ttttctacttttgacttgtgtttataattgttccatacactttgtttt-ggctgctccattattcattgctccacacatcaagtttgttattggtgtggt 53468316  T
Q  130 tttc 133  Q
    ||||    
T  53468315 tttc 53468312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 145
Target Start/End: Complemental strand, 880208 - 880087
Alignment:
Q  27 cgttgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    ||||||||||||||||||| |||| ||| ||| |||| |||||||||||||||   || |||||  || |||| ||||||||||||||||| ||||||||    
T  880208 cgttgttttctacttttggtttgtgattataactgtttcatacactttgttttct-ttgcttgattattccttactccacacatcaagtttattattggt 880110  T
Q  125 gtga--ttttcatagaattcgca 145  Q
    ||||  ||||||| |||||||||    
T  880109 gtgactttttcatcgaattcgca 880087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 148
Target Start/End: Original strand, 53591503 - 53591597
Alignment:
Q  54 taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgattt-tcatagaattcgcaaca 148  Q
    ||||||||||||||| |||||||| |||| |||||  |||||||| |||||||||||| |||||||||| |||| ||| |||| |||||| |||||    
T  53591503 taattgttccatacattttgtttt-ggttgcttgattatcccttgttccacacatcaaatttgttattgatgtgttttctcattgaattcacaaca 53591597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 6232159 - 6232208
Alignment:
Q  99 ctccacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||||||||||    
T  6232159 ctccacacatcaaatttgttattagtgtgattttcatcgaattcgcaaca 6232208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 48361634 - 48361538
Alignment:
Q  27 cgttgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattg 122  Q
    |||||||||||||||||| ||||| ||| |||||||||||||||||||| |||||||| |||||  || | ||| |||| |||| |||||||||||||    
T  48361634 cgttgttttctacttttgacttgtgattataattgttccatacactttg-ttttggttgcttgattattcattgttccatacattaagtttgttattg 48361538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 47148861 - 47148744
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||||| ||||| ||||  |||||||||||||||||| ||||||||  ||||  |||       ||||||||||||||||||||||||    
T  47148861 cgttgttttctacttttgacttgtgtttataattgttccatacactttg-ttttggttgtttgattatc-------ccacacatcaagtttgttattggt 47148770  T
Q  125 gtga-ttttcatagaattcgcaacag 149  Q
    |||| |||||||  ||||| ||||||    
T  47148769 gtgagttttcatcaaattcacaacag 47148744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 54691538 - 54691417
Alignment:
Q  28 gttgttttctacttttggcttgtatt--taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtg 125  Q
    ||||||||||||||||||||||| ||  |||||||| |||||| |||| |||||||| | |||  ||| |||||||||||||| || |||||||||| ||    
T  54691538 gttgttttctacttttggcttgtgtttataattgtttcatacattttg-ttttggttgcctgattatcacttgctccacacat-aaatttgttattgatg 54691441  T
Q  126 tgattt-tcatagaattcgcaaca 148  Q
    || ||| |||| |||||| |||||    
T  54691440 tgttttctcatcgaattcacaaca 54691417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 17795595 - 17795670
Alignment:
Q  75 ttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga-ttttcatagaattcgcaacag 149  Q
    |||||||| |||||| |||  |||||||||||||||| ||| |||||||||||| ||||||| |||||| ||||||    
T  17795595 ttttggttgcttgactatcagttgctccacacatcaaatttattattggtgtgatttttcatcgaattcacaacag 17795670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 19104035 - 19104110
Alignment:
Q  75 ttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga-ttttcatagaattcgcaacag 149  Q
    |||||||| |||||| |||  |||||||||||||||| ||| |||||||||||| ||||||| |||||| ||||||    
T  19104035 ttttggttgcttgactatcagttgctccacacatcaaatttattattggtgtgatttttcatcgaattcacaacag 19104110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Complemental strand, 561739 - 561637
Alignment:
Q  30 tgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgat 129  Q
    ||||||||||||||| ||||| ||||    |||||||||||||||||  |||| |||||  ||  ||| ||||||||||||||| | |||||||||||||    
T  561739 tgttttctacttttg-cttgtgtttataacttccatacactttgttt--ggttgcttgattattacttactccacacatcaagtattttattggtgtgat 561643  T
Q  130 tttcat 135  Q
    ||||||    
T  561642 tttcat 561637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 28761407 - 28761287
Alignment:
Q  27 cgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgt 126  Q
    |||||||||||||||||| |||||  |||    ||||||||||||| |||| ||||  ||||  ||| |||||||||||||||||| || ||||||||||    
T  28761407 cgttgttttctacttttg-cttgtgattataatttccatacactttatttt-ggttgtttgattatcacttgctccacacatcaagattattattggtgt 28761310  T
Q  127 ga-ttttcatagaattcgcaaca 148  Q
    || ||||||| |||||| |||||    
T  28761309 gatttttcatcgaattcacaaca 28761287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 55
Target Start/End: Original strand, 42992557 - 42992591
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta 55  Q
    |||||||||||||||||||||||||||||||||||    
T  42992557 tctcgccgttgttttctacttttggcttgtattta 42992591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 4666808 - 4666911
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    |||||| ||||||||| |||| ||||  |||||| |||||||||| |||| |||| | |||  ||| ||| ||||||||||||| ||| |||||||||||    
T  4666808 tgttttatacttttggtttgtttttataattgtttcatacactttatttt-ggttgcatgataatcacttactccacacatcaaatttattattggtgtg 4666906  T
Q  128 atttt 132  Q
    |||||    
T  4666907 atttt 4666911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 148
Target Start/End: Original strand, 31151667 - 31151754
Alignment:
Q  60 ttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||||||||||| |||| |||||  ||  ||||||||||||||||||| | |||||||||||| ||||||| |||||| |||||    
T  31151667 ttccatacactttgtttt-ggttgcttgattattacttgctccacacatcaagtat-ttattggtgtgatttttcatcgaattcacaaca 31151754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 29897580 - 29897544
Alignment:
Q  97 tgctccacacatcaagtttgttattggtgtgattttc 133  Q
    ||||||||||||||||||||||||||||||| |||||    
T  29897580 tgctccacacatcaagtttgttattggtgtggttttc 29897544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 29913857 - 29913821
Alignment:
Q  97 tgctccacacatcaagtttgttattggtgtgattttc 133  Q
    ||||||||||||||||||||||||||||||| |||||    
T  29913857 tgctccacacatcaagtttgttattggtgtggttttc 29913821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 53597592 - 53597644
Alignment:
Q  96 ttgctccacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    ||||||||||||| |||| | ||||||||||||||||||| |||||| |||||    
T  53597592 ttgctccacacataaagtattttattggtgtgattttcatcgaattcacaaca 53597644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 23633745 - 23633862
Alignment:
Q  30 tgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga- 128  Q
    |||||||||||| |||||||| ||||    |||||||||||||| |||||||| |||||   || |||||| |||||||| ||| | ||||||||||||     
T  23633745 tgttttctacttgtggcttgtgtttataaattccatacactttg-ttttggttgcttgattttcacttgcttcacacatctagtat-ttattggtgtgat 23633842  T
Q  129 ttttcatagaattcgcaaca 148  Q
    ||||||| |||||| |||||    
T  23633843 ttttcatcgaattcacaaca 23633862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 36957663 - 36957713
Alignment:
Q  91 atcccttgctccacacatcaagtttgttattggtgtgattttcatagaattc 142  Q
    |||||||||||||||||||||| ||||||||| | |||||||||| ||||||    
T  36957663 atcccttgctccacacatcaag-ttgttattgatatgattttcatcgaattc 36957713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 25635736 - 25635788
Alignment:
Q  95 cttgctccacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    ||||||||||||||||||| | ||||| ||||||||||||| |||||| |||||    
T  25635736 cttgctccacacatcaagtat-ttattagtgtgattttcatcgaattcacaaca 25635788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 14634339 - 14634291
Alignment:
Q  100 tccacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||||||||| | ||||||||||||||||||  |||||| |||||    
T  14634339 tccacacatcaagtattttattggtgtgattttcaacgaattcacaaca 14634291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 21702908 - 21702960
Alignment:
Q  96 ttgctccacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||| ||||||||||||| | |||||||| ||||||||| ||||||| |||||    
T  21702908 ttgcaccacacatcaagtattttattggtatgattttcaaagaattcacaaca 21702960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 106; Significance: 6e-53; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 7094445 - 7094301
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||  |||||||| |||||| || |||||||||    
T  7094445 ttctcttctttgtgttcttctcgccgttgttttctacttttgacttgtatttaattgttccacacacttt-attttggttgcttgactatgccttgctcc 7094347  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  7094346 acacatcaagtttgttattggtgtgattttcatcgaattcgcaaca 7094301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 48457957 - 48458100
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||  ||| ||||||||    
T  48457957 ttctcttctttgtgttcttctcgccgttgttttctacttttgacttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgctcc 48458055  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||    
T  48458056 acacatcaag-ttgttattggtgtgattttcatcgaattcgcaaca 48458100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 38394290 - 38394434
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||||||||||||    
T  38394290 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatcccttgctcc 38394388  T
Q  103 acacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||| ||||||||||||||| ||||||| |||||| |||||    
T  38394389 acacatcaag-ttgttattggtgtgatttttcatcgaattcacaaca 38394434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 7092198 - 7092054
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||| |||||||||||||||| ||| ||||||||||||||| ||||||| |||| |||| |||||| ||||||||||||    
T  7092198 ttctcttctttgtgttcttctcgccattgttttctacttttgacttatatttaattgttccacacactttatttt-ggttgcttgactatcccttgctcc 7092100  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||    
T  7092099 acacatcaagtttgttattggtgtgattttcatcgaatttgcaaca 7092054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 44868 - 45013
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||  |||| |||||||    
T  44868 ttctcttctttgtgttcttctcgccgttgttttctactttttgcttgtatttaattgttccatacactttg-ttttggttgcttgattatccattgctcc 44966  T
Q  103 acacatcaagtttgttattggtgtgattt-tcatagaattcgcaacag 149  Q
    |||||||||| |||||||||||||||||| |||| |||||||||||||    
T  44967 acacatcaag-ttgttattggtgtgatttctcatcgaattcgcaacag 45013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 7471965 - 7471821
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||||||||||||    
T  7471965 ttctcttatttgtgttcttctcaccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatcccttgctcc 7471867  T
Q  103 acacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||| ||||||||||||||| ||||||| ||||||||||||    
T  7471866 acacatcaag-ttgttattggtgtgatttttcattgaattcgcaaca 7471821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 11759431 - 11759575
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||| ||||||||    
T  11759431 ttctctcctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgctcc 11759529  T
Q  103 acacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||| ||||||||||||||| ||||||| ||||||||||||    
T  11759530 acacatcaag-ttgttattggtgtgatttttcatcgaattcgcaaca 11759575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 18345845 - 18345967
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||    
T  18345845 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgactatcccttgctcc 18345943  T
Q  103 acacatcaagtttgttattggtgtg 127  Q
    |||||||||| ||||| ||||||||    
T  18345944 acacatcaag-ttgttgttggtgtg 18345967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 20297666 - 20297810
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||| ||||||||    
T  20297666 ttctcctctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgctcc 20297764  T
Q  103 acacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||| ||||||||||||||| ||||||| |||||| |||||    
T  20297765 acacatcaag-ttgttattggtgtgatttttcatcgaattcacaaca 20297810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 3 - 147
Target Start/End: Original strand, 28487857 - 28488000
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    |||| |||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||  ||||||||||||    
T  28487857 ttcttttctttgtgttcttctagccgttgttttctacttttgacttgtatttaattgttccatacactttg-ttttggttgcttgattatcccttgctcc 28487955  T
Q  103 acacatcaagtttgttattggtgtga-ttttcatagaattcgcaac 147  Q
    |||||||||| ||||||||||||||| ||||||| |||||||||||    
T  28487956 acacatcaag-ttgttattggtgtgatttttcatcgaattcgcaac 28488000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 40836728 - 40836601
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||  ||||||||||||    
T  40836728 ttctcttctttttgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgtttgattatcccttgctcc 40836630  T
Q  103 acacatcaagtttgttattggtgtgatttt 132  Q
    |||||||||| |||||||||||||||||||    
T  40836629 acacatcaag-ttgttattggtgtgatttt 40836601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 35933 - 36059
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||  ||||||||||||    
T  35933 ttctcttctttgtgttcttctcgccattgttttctacttttggtttgtatttaattgttccatacactttg-ttttggttgcttgattatcccttgctcc 36031  T
Q  103 acacatcaagtttgttattggtgtgattt 131  Q
    |||||||||| ||||||||||||||||||    
T  36032 acacatcaag-ttgttattggtgtgattt 36059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 43253502 - 43253357
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctc 101  Q
    ||||||||||||||||| |||||| |||||||| ||||||||| |||||||||||||||||||||||||||| |||||||| |||||  ||| |||||||    
T  43253502 ttctcttctttgtgttcttctcgctgttgtttttctacttttgacttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgctc 43253404  T
Q  102 cacacatcaagtttgttattggtgtgattttcatagaattcgcaacag 149  Q
    ||||||||||  |||||||||||||||||||||| |||||||||||||    
T  43253403 cacacatcaa-attgttattggtgtgattttcatcgaattcgcaacag 43253357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 25542832 - 25542976
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| || |||||  ||||||||||||    
T  25542832 ttctcttctttgtgttcttctcaccgttgttttctacttttggcttgtatttaattgttccatacattttg-ttttgattgcttgattatcccttgctcc 25542930  T
Q  103 acacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||| ||||||||||||||| ||||||| |||||| |||||    
T  25542931 acacatcaag-ttgttattggtgtgatttttcatcgaattcacaaca 25542976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 20299764 - 20299891
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||| ||||||||    
T  20299764 ttctctcctttgtgttcttctcgcagttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgctcc 20299862  T
Q  103 acacatcaagtttgttattggtgtgatttt 132  Q
    |||||||||| |||||||||||||||||||    
T  20299863 acacatcaag-ttgttattggtgtgatttt 20299891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 28485867 - 28486013
Alignment:
Q  1 tattctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgct 100  Q
    ||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||  ||||||||||    
T  28485867 tattctcttctttgtgttcttctatccgttgttttctacttttggcttgtatttaattgttccatacattttg-ttttggttgcttgattatcccttgct 28485965  T
Q  101 ccacacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    ||||| |||||| ||||||||||||||| ||||||| |||||| |||||    
T  28485966 ccacatatcaag-ttgttattggtgtgatttttcatcgaattcacaaca 28486013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 3 - 146
Target Start/End: Original strand, 38396938 - 38397084
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt-----ctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatccctt 97  Q
    ||||||||||||||||| |||||||||||||||     ||||||||||||||||||||||||||| |||||||||| |||||||| ||| |  |||||||    
T  38396938 ttctcttctttgtgttcttctcgccgttgtttttttttctacttttggcttgtatttaattgttctatacactttg-ttttggttgctttattatccctt 38397036  T
Q  98 gctccacacatcaagtttgttattggtgtgattttcatagaattcgcaa 146  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  38397037 gctccacacatcaag-ttgttattggtgtgattttcatcgaattcgcaa 38397084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 4 - 131
Target Start/End: Original strand, 3036029 - 3036154
Alignment:
Q  4 tctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcca 103  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||| |||||||||    
T  3036029 tctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgctcca 3036127  T
Q  104 cacatcaagtttgttattggtgtgattt 131  Q
     |||||||  ||||||||||||||||||    
T  3036128 aacatcaa-attgttattggtgtgattt 3036154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 1850285 - 1850411
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| | || | |||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||  ||||||||||||    
T  1850285 ttctcttctttgtgttcttttcactgttgttttctacttttggcttgtatttaattgtttcatacactttg-ttttggttgcttgattatcccttgctcc 1850383  T
Q  103 acacatcaagtttgttattggtgtgattt 131  Q
    |||||||||| ||||||||||||||||||    
T  1850384 acacatcaag-ttgttattggtgtgattt 1850411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 7470007 - 7469864
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||  ||||| ||||||    
T  7470007 ttctcttatttgtgttcttctcaccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttagttgcttgattatccc-tgctcc 7469910  T
Q  103 acacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||  ||||||||||||||| ||||||| ||||||||||||    
T  7469909 acacatcaa-attgttattggtgtgatttttcatcgaattcgcaaca 7469864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 2935576 - 2935717
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctactttt-ggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccac 104  Q
    |||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| ||| |  |||||||||| |||    
T  2935576 tcttcttt-tgttcttctcgccgttgttttctactttttggcttgtatttaattgttccatacgctttg-ttttggttgcttaattatcccttgcttcac 2935673  T
Q  105 acatcaagtttgttattggtgtgattttcatagaattcgcaacag 149  Q
    |||||||| |||||||||||||||||||||| |||||| ||||||    
T  2935674 acatcaag-ttgttattggtgtgattttcatcgaattcacaacag 2935717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 1606687 - 1606827
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||| ||| |  |||||||||||||||    
T  1606687 tcttcttt-tgttcttctcgccgttgttttctacttttggcttgtatttaattattccatacgctttg-ttttggttgcttaattatcccttgctccaca 1606784  T
Q  106 catcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    ||||||| ||||||||||||||| ||||||| |||||| |||||    
T  1606785 catcaag-ttgttattggtgtgatttttcatcgaattcacaaca 1606827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 3878881 - 3879027
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctc 101  Q
    ||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||| |||  |||||||| |||||  ||| |||||||    
T  3878881 ttctcttctttgtgttcttctcgccgttgtttttctacttttggtttgtatttaattgttccatacatttttgttttggttgcttgattatctcttgctc 3878980  T
Q  102 cacacatcaagtttgttattggtgtgattt-tcatagaattcgcaaca 148  Q
    ||||||||||| || |||||| |||||||| |||| ||||||||||||    
T  3878981 cacacatcaag-ttattattgatgtgatttctcatcgaattcgcaaca 3879027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 21 - 148
Target Start/End: Complemental strand, 13099446 - 13099317
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||||||||||||| ||||  ||||| ||||||||||||||||||||||||||||    
T  13099446 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgtttgacgatcccttgctccacacatcaagtttgtt 13099348  T
Q  119 attggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||| ||||||| |||||| |||||    
T  13099347 attggtgtgatttttcatcgaattcacaaca 13099317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 40946632 - 40946777
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt--ctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgct 100  Q
    |||| |||||||||||| |||||||||| ||||  ||| |||||||||||||||||||||| ||||||||||| |||||||| |||||  ||||||||||    
T  40946632 ttcttttctttgtgttcttctcgccgtttttttttctatttttggcttgtatttaattgtttcatacactttg-ttttggttgcttgattatcccttgct 40946730  T
Q  101 ccacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||||||| ||||||||| ||||||| |||| |||||| |||||    
T  40946731 ccacacatcaag-ttgttattgatgtgattctcatcgaattcacaaca 40946777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 21 - 148
Target Start/End: Complemental strand, 27306205 - 27306076
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||||||||    
T  27306205 tctcgctgttgttttcttcttttggcttgtgattataattgttccatacactttgtttt-ggttgcttgactatcccttgttccacacatcaagtttgtt 27306107  T
Q  119 attggtgtgat-tttcatagaattcgcaaca 148  Q
    ||||||||||| | |||| ||||||||||||    
T  27306106 attggtgtgatctctcatcgaattcgcaaca 27306076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 7351633 - 7351509
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    || ||||||||||| |||||||| ||| |  ||||||| |||||||    
T  7351633 tcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttaattatcccttactccaca 7351535  T
Q  106 catcaagtttgttattggtgtgatttt 132  Q
    ||||||| |||||||||||||||||||    
T  7351534 catcaag-ttgttattggtgtgatttt 7351509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 148
Target Start/End: Complemental strand, 9027166 - 9027034
Alignment:
Q  15 tgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtt 114  Q
    ||||| ||| |||||||||||||||||||||||||||||||    || ||||||||||| |||||||| |||||  |||||||||||||||||||||| |    
T  9027166 tgttcttctagccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-t 9027069  T
Q  115 tgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||||||| ||||||| ||||||||||||    
T  9027068 tgttattggtgtgatttttcatcgaattcgcaaca 9027034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 44724898 - 44725022
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--at-tgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattgg 123  Q
    |||||||||||||||||||||||| ||||  || |||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||    
T  44724898 cgttgttttctacttttggcttgtgtttataatatgttccatacactttgtttt-ggttgcttgactatcccttgctccacacatcaagtttgttattgg 44724996  T
Q  124 tgtgattt-tcatagaattcgcaaca 148  Q
    |||| |||  ||| ||||||||||||    
T  44724997 tgtgttttcccatcgaattcgcaaca 44725022  T

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Target: chr7; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 26804833 - 26804955
Alignment:
Q  28 gttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtg 125  Q
    ||||||||||||||||| ||||| ||||  |||||||||||||||||||||| |||| |||||| |||| |||||||||||||||| |||||||||||||    
T  26804833 gttgttttctacttttgacttgtgtttataattgttccatacactttgtttt-ggttgcttgactatcctttgctccacacatcaaatttgttattggtg 26804931  T
Q  126 tgattt-tcatagaattcgcaaca 148  Q
    |||||| ||||  |||||||||||    
T  26804932 tgatttctcatcaaattcgcaaca 26804955  T

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Target: chr7; HSP #31
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 11355581 - 11355687
Alignment:
Q  28 gttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtg 125  Q
    ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||| | |||  || |||||||||||||||||| ||| |||||||||    
T  11355581 gttgttttctacttttggcttgtgtttataattgttccatacactttgtttttggttgcctgattattccttgctccacacatcaaatttattattggtg 11355680  T
Q  126 tgatttt 132  Q
    |||||||    
T  11355681 tgatttt 11355687  T

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Target: chr7; HSP #32
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 42330966 - 42330845
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||  |||| |||||||||||||||||||| ||||||| |||    
T  42330966 tgttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgattatccattgctccacacatcaagtttattattggcgtg 42330868  T
Q  128 attt-tcatagaattcgcaacag 149  Q
    |||| |||| |||||||||||||    
T  42330867 atttctcatcgaattcgcaacag 42330845  T

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Target: chr7; HSP #33
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 30 - 128
Target Start/End: Original strand, 443922 - 444021
Alignment:
Q  30 tgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||| |||||| || ||||||||||||||||||||||||||||||||||    
T  443922 tgttttctacttttggcttgtgattataattgttcaatacactttgtttt-ggttgcttgactattccttgctccacacatcaagtttgttattggtgtg 444020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 32 - 148
Target Start/End: Complemental strand, 4295899 - 4295781
Alignment:
Q  32 ttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga- 128  Q
    ||||||||||||||||||| ||||  ||||||| |||||||||||||| |||| |||||  || |||||||||||||||||||||||||||||||||||     
T  4295899 ttttctacttttggcttgtgtttattattgttctatacactttgtttt-ggttgcttgatgattccttgctccacacatcaagtttgttattggtgtgat 4295801  T
Q  129 ttttcatagaattcgcaaca 148  Q
    ||||||| ||||| ||||||    
T  4295800 ttttcatcgaatttgcaaca 4295781  T

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Target: chr7; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 31435016 - 31434892
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||||||||||| ||||  |||||||| |||||||| |||| | || |||||  || |||||||||||||||||||||||||||||||    
T  31435016 cgttgttttctacttttggcttgtgtttataattgttccttacactttatttt-gattgcttgattattccttgctccacacatcaagtttgttattggt 31434918  T
Q  125 gtgattt--tcatagaattcgcaaca 148  Q
    |||||||  |||| ||||||||||||    
T  31434917 gtgattttctcatcgaattcgcaaca 31434892  T

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Target: chr7; HSP #36
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 30 - 127
Target Start/End: Original strand, 9679383 - 9679482
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||| ||||| ||||  |||||||||||||||||| |||||||| | |||  ||| |||||||||||||||||||||||||||||||||    
T  9679383 tgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtg 9679482  T

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Target: chr7; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 132
Target Start/End: Original strand, 40550161 - 40550260
Alignment:
Q  32 ttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgattt 131  Q
    |||||||||||||||| |||||| ||| |||||||| ||||| |||||||| ||| |  |||||||||||||||||||||| ||||||||||||||||||    
T  40550161 ttttctacttttggctcgtattttattattccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattt 40550259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 37412090 - 37411988
Alignment:
Q  27 cgttgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||| ||||||||||| ||| |||||||||||||||||||||||| |||| |||||  || ||||| |||||||||||||||||||||||||    
T  37412090 cgttgttttctagttttggcttgtgattataattgttccatacactttgtttt-ggttgcttgattattccttgttccacacatcaagtttgttattggt 37411992  T
Q  125 gtga 128  Q
    ||||    
T  37411991 gtga 37411988  T

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Target: chr7; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 21678386 - 21678506
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| ||||  |||||||| ||||||||||||| |||| |||||  || |||||||||||| |||||||||||||| ||||||    
T  21678386 tgttttctacttttggcttgtgtttataattgttccttacactttgtttt-ggttgcttgattattccttgctccacaaatcaagtttgttatcggtgtg 21678484  T
Q  128 a-ttttcatagaattcgcaaca 148  Q
    | ||||||| |||||| |||||    
T  21678485 atttttcatcgaattcacaaca 21678506  T

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Target: chr7; HSP #40
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 149
Target Start/End: Original strand, 21680349 - 21680473
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||||| ||| | |||  || ||||||| ||||||||||| |||||||||||    
T  21680349 cgttgttttctacttttggcttgtgtttataattgttccatacactttgttttt-gttgcatgattattccttgcttcacacatcaagcttgttattggt 21680447  T
Q  125 gt-gattttcatagaattcgcaacag 149  Q
    || | ||||||| |||||| ||||||    
T  21680448 gtgggttttcatcgaattcacaacag 21680473  T

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Target: chr7; HSP #41
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 1046909 - 1046775
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttg--ttttctac--ttttggcttgtatttaattgttcca-tacactttg-tttttggtttcttgaccatccct 96  Q
    ||||||||||||||||| |||||||||||  ||||||||  ||||||||||||||||    ||||| ||||||||| ||||||||| |||||  ||| ||    
T  1046909 ttctcttctttgtgttcttctcgccgttgttttttctacctttttggcttgtatttataacttccattacactttgttttttggttgcttgattatctct 1046810  T
Q  97 tgctccacacatcaagtttgttattggtgtgatttt 132  Q
    |||||||||||||||| |||||||||||||||||||    
T  1046809 tgctccacacatcaag-ttgttattggtgtgatttt 1046775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 21990474 - 21990570
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    ||||| ||||||||||||||| ||||  |||||||||||||||||| |||||||| | |||  ||||||||||||||||||||||||| ||||||||    
T  21990474 tgtttgctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaagtttattattggt 21990570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 20626355 - 20626481
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttat 120  Q
    |||||| ||||||||||||||||||||| ||||||    |||||||||||||  |||||||| |||||  ||| ||||||||||||||| || |||||||    
T  20626355 tctcgctgttgttttctacttttggcttatatttataacttccatacacttt-attttggttgcttgattatctcttgctccacacatc-aggttgttat 20626452  T
Q  121 tggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||| ||||||| ||||||||||||    
T  20626453 tggtgtgatttttcatcgaattcgcaaca 20626481  T

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Target: chr7; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 20630246 - 20630372
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttat 120  Q
    |||||| ||||||||||||||||||||| ||||||    |||||||||||||  |||||||| |||||  ||| ||||||||||||||| || |||||||    
T  20630246 tctcgctgttgttttctacttttggcttatatttataacttccatacacttt-attttggttgcttgattatctcttgctccacacatc-aggttgttat 20630343  T
Q  121 tggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||| ||||||| ||||||||||||    
T  20630344 tggtgtgatttttcatcgaattcgcaaca 20630372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 20642665 - 20642791
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttat 120  Q
    |||||| ||||||||||||||||||||| ||||||    |||||||||||||  |||||||| |||||  ||| ||||||||||||||| || |||||||    
T  20642665 tctcgctgttgttttctacttttggcttatatttataacttccatacacttt-attttggttgcttgattatctcttgctccacacatc-aggttgttat 20642762  T
Q  121 tggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||| ||||||| ||||||||||||    
T  20642763 tggtgtgatttttcatcgaattcgcaaca 20642791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 132
Target Start/End: Original strand, 22137411 - 22137510
Alignment:
Q  32 ttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgattt 131  Q
    |||||||||||||||| |||||| ||| |||||||| ||||| |||||||| ||| |  ||| |||||||||||||||||| ||||||||||||||||||    
T  22137411 ttttctacttttggctcgtattttattattccatacgctttgattttggttgcttaattatctcttgctccacacatcaag-ttgttattggtgtgattt 22137509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 127
Target Start/End: Complemental strand, 22251550 - 22251452
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| ||||  |||||| ||||||||||||||| ||||  ||||  ||||||||||| |||||||||||||||||||||||||    
T  22251550 tgttttctacttttggcttgtgtttataattgtttcatacactttgtttt-ggttgtttgattatcccttgctcaacacatcaagtttgttattggtgtg 22251452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 132
Target Start/End: Original strand, 40552438 - 40552537
Alignment:
Q  32 ttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgattt 131  Q
    |||||||||||||||| |||||| ||| |||||||| ||||| |||||||| ||| |  ||| |||||||||||||||||| ||||||||||||||||||    
T  40552438 ttttctacttttggctcgtattttattattccatacgctttgattttggttgcttaattatctcttgctccacacatcaag-ttgttattggtgtgattt 40552536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 1049280 - 1049129
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt--ctac--ttttggcttgtatttaattgttccatacactttgttttt-ggtttcttgaccatccctt 97  Q
    ||||||||||||||||| ||| |||||||||||  ||||  ||||||||||||||||    || |||||||||||||||| |||| |||||  ||| |||    
T  1049280 ttctcttctttgtgttcttcttgccgttgttttttctacctttttggcttgtatttataactttcatacactttgttttttggttgcttgattatctctt 1049181  T
Q  98 gctccacacatcaagtttgttattggtgtga--ttttcatagaattcgcaaca 148  Q
    ||||||||||||||| |||||||||||||||  ||||| | ||||||||||||    
T  1049180 gctccacacatcaag-ttgttattggtgtgaatttttcttcgaattcgcaaca 1049129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 7349258 - 7349135
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    ||||||||| |||| ||||||||||||||| |||||||||||||||||||    || ||||||||||  |||||||| ||| |  ||||||| |||||||    
T  7349258 tcttctttgcgttcttctcgccgttgtttt-tacttttggcttgtatttataactttcatacacttt-attttggttgcttaattatcccttactccaca 7349161  T
Q  106 catcaagtttgttattggtgtgatttt 132  Q
    ||||||| |||||||||||||||||||    
T  7349160 catcaag-ttgttattggtgtgatttt 7349135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 148
Target Start/End: Original strand, 42223479 - 42223600
Alignment:
Q  29 ttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgt 126  Q
    |||||||||||||||| ||||| ||||  ||||||  ||||||||| |||| |||| |||||  ||||||| ||||||||||||||||||||||||||||    
T  42223479 ttgttttctacttttgccttgtgtttataattgttttatacactttatttt-ggttgcttgattatcccttactccacacatcaagtttgttattggtgt 42223577  T
Q  127 g-attttcatagaattcgcaaca 148  Q
    |  |||| || ||||||||||||    
T  42223578 gtttttttatcgaattcgcaaca 42223600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 32 - 127
Target Start/End: Original strand, 9681146 - 9681243
Alignment:
Q  32 ttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||| ||||  |||||||||||||||||| ||||||||   | |  ||| |||| ||||||||||||||||||||||||||||    
T  9681146 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgtctaattatcacttgttccacacatcaagtttgttattggtgtg 9681243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 22108401 - 22108483
Alignment:
Q  32 ttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtt 114  Q
    |||||||||||||||| |||||| ||| |||||||| ||||| |||||||| ||| |  ||||||||||||||||||||||||    
T  22108401 ttttctacttttggctcgtattttattattccatacgctttgattttggttgcttaattatcccttgctccacacatcaagtt 22108483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 31155908 - 31155811
Alignment:
Q  8 ttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg--tttttggtttcttgaccatcccttgctcca 103  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||    || |||||||||||  ||||||||||||| |  |||||||||||||    
T  31155908 ttctttgtgttcttctcgccgtttttttctacttttggcttgtatttataactttcatacactttgtttttttggtttcttaattatcccttgctcca 31155811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 24748946 - 24749018
Alignment:
Q  60 ttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgattttc 133  Q
    |||||||||||||||||| ||||  ||||  ||||||||||||||||||||||||||||||||||||| |||||    
T  24748946 ttccatacactttgtttt-ggttgtttgattatcccttgctccacacatcaagtttgttattggtgtggttttc 24749018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 21592108 - 21591988
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||  ||||||||   |||  ||| |||||||||||||||||||||||||| |  |||    
T  21592108 tgttttctacttttggcttgtgtttataattgttccatacacttt--ttttggttgtctgattatcacttgctccacacatcaagtttgttatagccgtg 21592011  T
Q  128 attt-tcatagaattcgcaacag 149  Q
     ||| |||| |||||||||||||    
T  21592010 ttttctcatcgaattcgcaacag 21591988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 39145954 - 39145856
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    ||||||||||||||||||| |||| ||||  ||||||  ||||| |||||||| |||| |||||  ||| ||| ||||||||||||||||||||||||||    
T  39145954 cgttgttttctacttttggtttgtgtttataattgtttaatacaatttgtttt-ggttgcttgattatcacttactccacacatcaagtttgttattggt 39145856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 24465857 - 24465975
Alignment:
Q  30 tgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga- 128  Q
    |||||||||||||||| ||||  |||    |||||||||||||||||| |||| |||||  ||| |||| |||||||||||| ||| ||||||||||||     
T  24465857 tgttttctacttttggtttgtgattataacttccatacactttgtttt-ggttgcttgaatatcacttgttccacacatcaaatttattattggtgtgat 24465955  T
Q  129 ttttcatagaattcgcaaca 148  Q
    ||||||| |||||| |||||    
T  24465956 ttttcatcgaattcacaaca 24465975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 1502868 - 1502816
Alignment:
Q  95 cttgctccacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||| |||||    
T  1502868 cttgctccacacatcaagtt-gttattggtgtgattttcattgaattcacaaca 1502816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 27832606 - 27832488
Alignment:
Q  30 tgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga- 128  Q
    |||||||||||||||| ||||  |||    |||||||||||||||||| |||| |||||  ||  | |||||||||||| ||||||||||||||| |||     
T  27832606 tgttttctacttttggtttgtgattataacttccatacactttgtttt-ggttacttgattatttcctgctccacacattaagtttgttattggtatgat 27832508  T
Q  129 ttttcatagaattcgcaaca 148  Q
    ||||||| |||||| |||||    
T  27832507 ttttcatcgaattcacaaca 27832488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 7188861 - 7188961
Alignment:
Q  30 tgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgat 129  Q
    ||||||||||||||| ||||| ||||    |||||||||||||||||| |||| |||||  ||  ||||||||||||||||||| | |||||| ||||||    
T  7188861 tgttttctacttttg-cttgtgtttataacttccatacactttgtttt-ggttgcttgattattacttgctccacacatcaagtattttattgatgtgat 7188958  T
Q  130 ttt 132  Q
    |||    
T  7188959 ttt 7188961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 20137066 - 20137009
Alignment:
Q  75 ttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgatttt 132  Q
    |||||||| |||||| ||||||||||||||||||||| ||| ||||| || |||||||    
T  20137066 ttttggttgcttgactatcccttgctccacacatcaaatttattattcgtatgatttt 20137009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 24817256 - 24817203
Alignment:
Q  95 cttgctccacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||||||||| |||| | ||||||||||||||||||| ||||| ||||||    
T  24817256 cttgctccacacattaagtattttattggtgtgattttcattgaatttgcaaca 24817203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 25357324 - 25357361
Alignment:
Q  96 ttgctccacacatcaagtttgttattggtgtgattttc 133  Q
    |||||||||||||||||||||||||||||||| |||||    
T  25357324 ttgctccacacatcaagtttgttattggtgtggttttc 25357361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 26295765 - 26295868
Alignment:
Q  27 cgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgt 126  Q
    |||||||||||||||||||||||| ||||    || ||||||||||| ||||| || |||||  ||| | ||||||| ||||||||| | ||||||||||    
T  26295765 cgttgttttctacttttggcttgtgtttataattttcatacactttg-ttttgattgcttgattatcacgtgctccatacatcaagtat-ttattggtgt 26295862  T
Q  127 gatttt 132  Q
    ||||||    
T  26295863 gatttt 26295868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 22394042 - 22394137
Alignment:
Q  27 cgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtg 125  Q
    ||||||||||||||||||| ||||  |||    |||||||||||||| ||||||||  ||||| ||| |||||||  |||||||||||| |||||||||    
T  22394042 cgttgttttctacttttggtttgtgattataacttccatacactttg-ttttggttgtttgactatcacttgctc--cacatcaagtttattattggtg 22394137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 31153740 - 31153691
Alignment:
Q  99 ctccacacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||||||||| ||||||||||||| ||||||| ||||||||||||    
T  31153740 ctccacacatcaagtt-gttattggtgtgatttttcatcgaattcgcaaca 31153691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 16104631 - 16104680
Alignment:
Q  99 ctccacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||| |||||||| ||||||||||||||||||  |||||| |||||    
T  16104631 ctccacacgtcaagtttattattggtgtgattttcaccgaattcacaaca 16104680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 24813401 - 24813348
Alignment:
Q  95 cttgctccacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    ||||||||||||||||||| | |||||| |||||||||||| ||| || |||||    
T  24813401 cttgctccacacatcaagtattttattgatgtgattttcatcgaactcacaaca 24813348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 25410411 - 25410448
Alignment:
Q  96 ttgctccacacatcaagtttgttattggtgtgattttc 133  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  25410411 ttgctcaacacatcaagtttgttattagtgtgattttc 25410448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 6e-53; HSPs: 77)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 20291750 - 20291894
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||  ||| ||||||||    
T  20291750 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacaccttgattttggttacttgattatctcttgctcc 20291849  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||    
T  20291850 acacatcaag-ttgttattggtgtgattttcatcgaattcgcaaca 20291894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 51750333 - 51750476
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||||||||||||    
T  51750333 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatcccttgctcc 51750431  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||||| ||||||||||||||||||| || ||||||||||||    
T  51750432 acacatcaag-ttgttattggtgtgatttttatcgaattcgcaaca 51750476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 15294821 - 15294677
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||| ||||||||    
T  15294821 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgctcc 15294723  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaacag 149  Q
    |||||||||| |||||||||||||||||||||| ||| |||||||||    
T  15294722 acacatcaag-ttgttattggtgtgattttcatcgaaatcgcaacag 15294677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 13447260 - 13447117
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||| ||||||||    
T  13447260 ttctcttctttgtgtttttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgctcc 13447162  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||    
T  13447161 acacatcaag-ttgttattggtgtgattttcatcgaattcgcaaca 13447117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 10399815 - 10399669
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||| ||||||||    
T  10399815 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcttgattatctcttgctcc 10399716  T
Q  103 acacatcaagtttgttattggtgtg--attttcatagaattcgcaaca 148  Q
    |||||||||| ||||||||||||||  |||||||| ||||||||||||    
T  10399715 acacatcaag-ttgttattggtgtgatattttcatcgaattcgcaaca 10399669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 13762130 - 13762275
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||||||| ||||    
T  13762130 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatccctttctcc 13762228  T
Q  103 acacatcaagtttgttattggtgtgattt--tcatagaattcgcaaca 148  Q
    |||||||||| ||||||||||||||||||  |||| ||||||||||||    
T  13762229 acacatcaag-ttgttattggtgtgattttctcatcgaattcgcaaca 13762275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 13358867 - 13359011
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    || ||||||||||| |||||||| |||||| ||||||| ||||    
T  13358867 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgattttggttgcttgactatcccttactcc 13358966  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||    
T  13358967 acacatcaag-ttgttattggtgtgattttcatcgaattcgcaaca 13359011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 20302743 - 20302879
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatca 110  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||  ||| ||||||||| ||||||    
T  20302743 tttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacaccttgattttggttacttgattatctcttgctccagacatca 20302842  T
Q  111 agtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    || |||||||||||||||||||||| ||||||||||||    
T  20302843 ag-ttgttattggtgtgattttcatcgaattcgcaaca 20302879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 2617829 - 2617955
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttat 120  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  |||||||||| ||||||||||| |||||||    
T  2617829 tctcgctgttgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcttgattatcccttgcttcacacatcaag-ttgttat 2617927  T
Q  121 tggtgtgattttcatagaattcgcaaca 148  Q
    ||||||| ||||||| ||||||||||||    
T  2617928 tggtgtggttttcatcgaattcgcaaca 2617955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 31735508 - 31735365
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||  ||| ||||||||    
T  31735508 ttctcttctttgtgttcttctcgccgttgttttcta-ttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgctcc 31735411  T
Q  103 acacatcaagtttgttattggtgtgattt-tcatagaattcgcaaca 148  Q
    |||||||||| ||||||||||||| |||| |||| ||||||||||||    
T  31735410 acacatcaag-ttgttattggtgtaatttctcatcgaattcgcaaca 31735365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 47177659 - 47177784
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||| ||| |  |||||||||||||||    
T  47177659 tcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattattccatacgctttgattttggttgcttaattatcccttgctccaca 47177758  T
Q  106 catcaagtttgttattggtgtgatttt 132  Q
    ||||||| |||||||||||||||||||    
T  47177759 catcaag-ttgttattggtgtgatttt 47177784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 39932368 - 39932515
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctc 101  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    |||||||||||||||||| |||| |||||  |||||||||||    
T  39932368 ttctcttctttgtgttcttctcgccgttgtttttctacttttggcttgtatttataacttccatacactttgtttt-ggttgcttgattatcccttgctc 39932466  T
Q  102 cacacatcaagtttgttattggtgtga-ttttcatagaattcgcaacag 149  Q
    ||||||||||||||||||||||||||| ||||||| |||||| ||||||    
T  39932467 cacacatcaagtttgttattggtgtgatttttcatcgaattcacaacag 39932515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 46431693 - 46431548
Alignment:
Q  3 ttctcttcttt-gtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctc 101  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||  ||| |||||||    
T  46431693 ttctcttcttttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttg-ttttggttgcttgattatctcttgctc 46431595  T
Q  102 cacacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    || |||||||| ||||||||||||||| ||||||| ||||||||||||    
T  46431594 caaacatcaag-ttgttattggtgtgatttttcatcgaattcgcaaca 46431548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 47180010 - 47180135
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| || ||| |  |||||||||||||||    
T  47180010 tcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattattccatacgctttgattttgattgcttaattatcccttgctccaca 47180109  T
Q  106 catcaagtttgttattggtgtgatttt 132  Q
    ||||||| |||||||||||||||||||    
T  47180110 catcaag-ttgttattggtgtgatttt 47180135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 28842788 - 28842931
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    || ||||||||||| |||||||| |||||  ||||||| ||||    
T  28842788 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttactcc 28842886  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||||| |||||||| ||||||||||||| ||||||||||||    
T  28842887 acacatcaag-ttgttattagtgtgattttcatcgaattcgcaaca 28842931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 16226465 - 16226607
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    || ||||||||||| |||||||| |||||  |||||||||||||||    
T  16226465 tcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgattttggttgcttgattatcccttgctccaca 16226564  T
Q  106 catcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    ||||||| ||||||||||||||| ||||||| |||||| |||||    
T  16226565 catcaag-ttgttattggtgtgatttttcatcgaattcacaaca 16226607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 16231860 - 16232003
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    || ||||||||||| |||||||| |||||  |||| ||||||||||    
T  16231860 tcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgattttggttgcttgattatccgttgctccaca 16231959  T
Q  106 catcaagtttgttattggtgtga-ttttcatagaattcgcaacag 149  Q
    ||||||| ||||||||||||||| ||||||| |||||| ||||||    
T  16231960 catcaag-ttgttattggtgtgatttttcatcgaattcacaacag 16232003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 21 - 148
Target Start/End: Complemental strand, 6995669 - 6995540
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtatttaa--ttgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||||||||||||||||| ||||   ||||||||||||||||||||| | || |||||| ||||||||||||||||||||||||||||    
T  6995669 tctcgctgttgttttctacttttggcttgtgtttatagttgttccatacactttgtttt-gattgcttgactatcccttgctccacacatcaagtttgtt 6995571  T
Q  119 attggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||| ||||||| ||||||||||||    
T  6995570 attggtgtgatttttcatcgaattcgcaaca 6995540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 51757824 - 51757973
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt-----ctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatccctt 97  Q
    ||||||||||||||||| |||||||||||||||     |||||||||||||||||| ||||||||||||||||||| |||||||| |||||  |||||||    
T  51757824 ttctcttctttgtgttcttctcgccgttgtttttttccctacttttggcttgtattcaattgttccatacactttg-ttttggttgcttgattatccctt 51757922  T
Q  98 gctccacacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    ||||||||||||||| ||||||||||||| | ||||||| |||||| |||||    
T  51757923 gctccacacatcaag-ttgttattggtgtcatttttcatcgaattcacaaca 51757973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 8 - 149
Target Start/End: Complemental strand, 9459416 - 9459276
Alignment:
Q  8 ttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacaca 107  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||    || ||||||||||| |||||||| |||||  |||||||||||||||||    
T  9459416 ttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacaca 9459318  T
Q  108 tcaagtttgttattggtgtga-ttttcatagaattcgcaacag 149  Q
    ||||| ||||||||||||||| ||||||| |||||| ||||||    
T  9459317 tcaag-ttgttattggtgtgatttttcatcgaattcacaacag 9459276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 8 - 149
Target Start/End: Complemental strand, 9463243 - 9463103
Alignment:
Q  8 ttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacaca 107  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||    || ||||||||||| |||||||| |||||  |||||||||||||||||    
T  9463243 ttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacaca 9463145  T
Q  108 tcaagtttgttattggtgtga-ttttcatagaattcgcaacag 149  Q
    ||||| ||||||||||||||| ||||||| |||||| ||||||    
T  9463144 tcaag-ttgttattggtgtgatttttcatcgaattcacaacag 9463103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 23786137 - 23786278
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctactttt-ggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccac 104  Q
    |||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| ||| |  ||||||||||||||    
T  23786137 tcttcttt-tgttcttctcgccgttgttttctactttttggcttgtatttaattgttccatacgctttg-ttttggttgcttaattatcccttgctccac 23786234  T
Q  105 acatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||| ||||||||||||||| ||||||| |||||| |||||    
T  23786235 acatcaag-ttgttattggtgtgatttttcatcgaattcacaaca 23786278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 25251244 - 25251138
Alignment:
Q  27 cgttgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||||||||||| ||| |||||||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||    
T  25251244 cgttgttttctacttttggcttgtgattataattgtttcatacactttgtttt-ggttgcttgactatcccttgctccacacatcaagtttgttattggt 25251146  T
Q  125 gtgatttt 132  Q
    ||||||||    
T  25251145 gtgatttt 25251138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 39462826 - 39462956
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||||| ||||||||||| ||||  |||||||||||||||||| ||||| || | |||  ||||||||||||||||||||||||||||    
T  39462826 tctcgctgttgttttctaattttggcttgtgtttataattgttccatacactttgattttgattgcctgattatcccttgctccacacatcaagtttgtt 39462925  T
Q  119 attggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||| ||||||| ||||||||||||    
T  39462926 attggtgtgatttttcatcgaattcgcaaca 39462956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 50078759 - 50078635
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||  || |||||||||||||||||||||||||||||||    
T  50078759 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgattattccttgctccacacatcaagtttgttattggt 50078661  T
Q  125 gtgattt--tcatagaattcgcaaca 148  Q
    |||||||  |||| ||||||||||||    
T  50078660 gtgattttctcatcgaattcgcaaca 50078635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 27336914 - 27336801
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||| | |||  ||||||||||||||||||||||||||||    
T  27336914 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaagtttgtt 27336815  T
Q  119 attggtgtgatttt 132  Q
    |||| |||||||||    
T  27336814 attgatgtgatttt 27336801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 51752657 - 51752805
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt------ctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatccct 96  Q
    ||||||||||||||||| |||||||||||||||      |||||||||||||||||| ||||||| ||||||||||| |||||||| |||||  ||||||    
T  51752657 ttctcttctttgtgttcttctcgccgttgtttttttttcctacttttggcttgtattcaattgtttcatacactttg-ttttggttgcttgattatccct 51752755  T
Q  97 tgctccacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||||||| ||| || ||||||||||||||||||| |||||| |||||    
T  51752756 tgctccacacat-aag-ttattattggtgtgattttcatcgaattcacaaca 51752805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 24325960 - 24326101
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||||||||| |||| |||||||||| ||| |||| |||||||||||||||||||||||||||   ||||||| |||||  ||||||| |||||||    
T  24325960 tcttctttgtgttcttctcaccgttgttttttacctttgacttgtatttaattgttccatacacttt-actttggttgcttgattatcccttactccaca 24326058  T
Q  106 catcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    ||||||| ||||||||||||||| ||||||| |||||| |||||    
T  24326059 catcaag-ttgttattggtgtgatttttcatcgaattcacaaca 24326101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 148
Target Start/End: Complemental strand, 28207042 - 28206912
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||| | |||  ||| ||||||||||||||||||||||||    
T  28207042 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcacttgctccacacatcaagtttgtt 28206943  T
Q  119 attggtgtgattt-tcatagaattcgcaaca 148  Q
    ||||||||| ||| |||| |||||| |||||    
T  28206942 attggtgtgttttctcatcgaattcacaaca 28206912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 148
Target Start/End: Complemental strand, 50307519 - 50307389
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||| | |||  ||||||||||||| ||||||||||| ||    
T  50307519 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccagacatcaagtttatt 50307420  T
Q  119 attggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||| ||||||| |||||| |||||    
T  50307419 attggtgtgatttttcatcgaattcccaaca 50307389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 2949199 - 2949079
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||| |||| |||| |||||  |||||||||||||||||||||||||||||||||||||    
T  2949199 tgttttctacttttggcttgtgtttataattgttccatacactttatttt-ggttgcttgattatcccttgctccacacatcaagtttgttattggtgtg 2949101  T
Q  128 a-ttttcatagaattcgcaaca 148  Q
    | ||||||| |||||| |||||    
T  2949100 atttttcatcgaattcacaaca 2949079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 27339105 - 27338992
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||| | |||  |||||||| |||||||||||||||||||    
T  27339105 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgttccacacatcaagtttgtt 27339006  T
Q  119 attggtgtgatttt 132  Q
    |||| |||||||||    
T  27339005 attgatgtgatttt 27338992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 12302475 - 12302368
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||||| ||||| ||||  |||||||||||||||||| |||||||||| |||  ||| ||||||||||||||||||||||||||||||    
T  12302475 cgttgttttctacttttgacttgtgtttataattgttccatacactttgattttggtttcctgattatcacttgctccacacatcaagtttgttattggt 12302376  T
Q  125 gtgatttt 132  Q
    ||| ||||    
T  12302375 gtgttttt 12302368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 11 - 134
Target Start/End: Complemental strand, 2510321 - 2510200
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatca 110  Q
    ||||||||| |||||||||||||||||| ||||| ||||| |||||||||||||||||||||| |||| ||| |||||  ||| |||||| |||| ||||    
T  2510321 tttgtgttcttctcgccgttgttttctatttttgacttgtttttaattgttccatacactttg-ttttcgttgcttgattatctcttgcttcacatatca 2510223  T
Q  111 agtttgttattggtgtgattttca 134  Q
    || |||||||||||||||||||||    
T  2510222 ag-ttgttattggtgtgattttca 2510200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 4131345 - 4131221
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||| ||||||||||| ||||  |||||||||||||||||||||| |||| |||||  ||| |||||||| |||||||||||||||||||||    
T  4131345 cgttgttttctatttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgattatctcttgctccgcacatcaagtttgttattggt 4131247  T
Q  125 gtga--ttttcatagaattcgcaaca 148  Q
    ||||  ||||||| ||||||||||||    
T  4131246 gtgagtttttcatcgaattcgcaaca 4131221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 28840973 - 28841083
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    || ||||||||||| |||||||| |||||  ||||||||||||    
T  28840973 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctcc 28841071  T
Q  103 acacatcaagtt 114  Q
    || |||||||||    
T  28841072 actcatcaagtt 28841083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 23816195 - 23816323
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||||||||||| ||||| ||| |||||||||||||||||||| |||||||| |||||  || ||||||||||||||||||| |||||    
T  23816195 tctcgctgttgttttctacttttgacttgtgattataattgttccatacactttg-ttttggttgcttgattattccttgctccacacatcaag-ttgtt 23816292  T
Q  119 attggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||| ||||||| ||||||||||||    
T  23816293 attggtgtgatttttcatcgaattcgcaaca 23816323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 47906576 - 47906704
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||  ||||||| |||||  ||| |||||||||||||||||| |||||    
T  47906576 tctcgctgttgttttctacttttggcttgtgattataattgttccatacactttg-gtttggttgcttgattatctcttgctccacacatcaag-ttgtt 47906673  T
Q  119 attggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||| ||||||| ||||||||||||    
T  47906674 attggtgtgatttttcatcgaattcgcaaca 47906704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 3579550 - 3579431
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||| |||| |||| | |||  ||| |||||||||||||||||||||||||||||||||    
T  3579550 tgttttctacttttggcttgtgtttataattgttccatacactttatttt-ggttgcctgattatcacttgctccacacatcaagtttgttattggtgtg 3579452  T
Q  128 attttcatagaattcgcaaca 148  Q
     ||||||| |||||| |||||    
T  3579451 tttttcatcgaattcacaaca 3579431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 14097939 - 14097815
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||||| ||||| ||||  |||||||||||||||||| |||||||| |||||  ||| |||||| |||||||||||||||||||||||    
T  14097939 cgttgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcttgattatctcttgcttcacacatcaagtttgttattggt 14097840  T
Q  125 gtg-attttcatagaattcgcaaca 148  Q
    |||  ||||| | ||||||||||||    
T  14097839 gtgttttttcttcgaattcgcaaca 14097815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 30 - 155
Target Start/End: Original strand, 18839902 - 18840029
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||| ||||||||||| ||||  |||||||||||||||||||||  | || |||||  || ||||||||||||||||||||||||||||||||||    
T  18839902 tgttttctagttttggcttgtgtttataattgttccatacactttgtttc-gattacttgattattccttgctccacacatcaagtttgttattggtgtg 18840000  T
Q  128 a-ttttcatagaattcgcaacaggaatta 155  Q
    | ||||||| |||||||||||| ||||||    
T  18840001 atttttcatcgaattcgcaacaagaatta 18840029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 30 - 127
Target Start/End: Original strand, 13215398 - 13215496
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||| ||||  ||||| ||||||||||||||||||||||||| |||||||||||    
T  13215398 tgttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgtttgactatcccttgctccacacatcaagtttattattggtgtg 13215496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 21 - 134
Target Start/End: Complemental strand, 25860378 - 25860268
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||||||||||||| |     ||||| |||||||||||||||||||||||||| |    
T  25860378 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgttttgg-----ttgactatcccttgctccacacatcaagtttgat 25860284  T
Q  119 attggtgtgattttca 134  Q
    ||||||||| ||||||    
T  25860283 attggtgtggttttca 25860268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 47451943 - 47452065
Alignment:
Q  28 gttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtg 125  Q
    |||| |||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||| ||||||||||| ||||||||| |||||||||| ||    
T  47451943 gttgctttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgactatcccttgctcgacacatcaaatttgttattgatg 47452041  T
Q  126 tga-ttttcatagaattcgcaaca 148  Q
    ||| ||||||| |||||| |||||    
T  47452042 tgatttttcattgaattcacaaca 47452065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 27 - 150
Target Start/End: Complemental strand, 50248540 - 50248415
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||| |||||||||||||  |||  |||||||||||||||||||||| |||| |||||  ||||||| ||||||||||||| ||||||||||||    
T  50248540 cgttgttttcaacttttggcttgtggttataattgttccatacactttgtttt-ggttgcttgattatcccttactccacacatcaaatttgttattggt 50248442  T
Q  125 gtgattt-tcatagaattcgcaacagg 150  Q
    ||||||| |||| |||||| |||||||    
T  50248441 gtgatttatcatcgaattcacaacagg 50248415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 15823861 - 15823967
Alignment:
Q  28 gttgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtg 125  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||||||| |||||||| | |||  | ||||| |||||||||||||||||||||||||||    
T  15823861 gttgttttctacttttgccttgtgattataattgttccatacactttgattttggttgcctgattaccccttactccacacatcaagtttgttattggtg 15823960  T
Q  126 tgatttt 132  Q
    |||||||    
T  15823961 tgatttt 15823967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 9241054 - 9240951
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    |||||||||||||||| |||||||||  |||||| ||||||||||||||| |||| |||||  ||| |||||||||||| ||||||||||||||||||||    
T  9241054 tgttttctacttttggtttgtatttataattgtttcatacactttgtttt-ggttgcttgattatcacttgctccacacttcaagtttgttattggtgtg 9240956  T
Q  128 atttt 132  Q
    |||||    
T  9240955 atttt 9240951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 31424982 - 31424862
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||| ||||| ||||  ||||| ||||||| |||||| | |||| |||||  || ||||||||||||||||||||||||||||||||||    
T  31424982 tgttttctacttttgacttgtgtttataattgtcccatacattttgttat-ggttgcttgagtattccttgctccacacatcaagtttgttattggtgtg 31424884  T
Q  128 a-ttttcatagaattcgcaaca 148  Q
    | ||||||| ||||||||||||    
T  31424883 atttttcattgaattcgcaaca 31424862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 11457442 - 11457339
Alignment:
Q  30 tgttttctacttttggcttgtatttaa--ttgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| |||||  |||||||||| |||||||||| |||| | |||  ||| |||||| ||||||||||||||||||||||||||    
T  11457442 tgttttctacttttggcttgtgtttaaaattgttccatatactttgtttt-ggttgcctgattatcacttgcttcacacatcaagtttgttattggtgtg 11457344  T
Q  128 atttt 132  Q
    |||||    
T  11457343 atttt 11457339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 25248518 - 25248398
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||| ||| | ||||  |||||| ||||||||||||||| |||| |||||| || |||| |||||||||||||||||||||||| ||||    
T  25248518 tgttttctacttttgacttttgtttataattgtttcatacactttgtttt-ggttgcttgactattccttactccacacatcaagtttgttattgttgtg 25248420  T
Q  128 a-ttttcatagaattcgcaaca 148  Q
    | ||||||| |||||| |||||    
T  25248419 atttttcatcgaattcacaaca 25248398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 28998220 - 28998116
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgttt--ttggtttcttgaccatcccttgctccacacatcaagtttgttattg 122  Q
    |||||||||||||||||||||||| ||||  |||||||||||||||||| ||  |||||| | |||  ||| ||||||||||||||||||||||| ||||    
T  28998220 cgttgttttctacttttggcttgtgtttataattgttccatacactttgattctttggttgcctgattatcacttgctccacacatcaagtttgtcattg 28998121  T
Q  123 gtgtg 127  Q
    |||||    
T  28998120 gtgtg 28998116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 29003936 - 29003832
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgttt--ttggtttcttgaccatcccttgctccacacatcaagtttgttattg 122  Q
    |||||||||||||||||||||||| ||||  |||||||||||||||||| ||  |||||| | |||  ||| ||||||||||||||||||||||| ||||    
T  29003936 cgttgttttctacttttggcttgtgtttataattgttccatacactttgattctttggttgcctgattatcacttgctccacacatcaagtttgtcattg 29003837  T
Q  123 gtgtg 127  Q
    |||||    
T  29003836 gtgtg 29003832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 31490226 - 31490345
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||| ||||| ||||  |||||| |||||||||| |||| |||| |||||  ||| |||||||||||||||||||||| ||||||||||    
T  31490226 tgttttctacttttgacttgtgtttataattgtttcatacactttatttt-ggttgcttgattatctcttgctccacacatcaagtttg-tattggtgtg 31490323  T
Q  128 a-ttttcatagaattcgcaaca 148  Q
    | ||||||| ||||||||||||    
T  31490324 atttttcatcgaattcgcaaca 31490345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 17324388 - 17324484
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtg 125  Q
    ||||||||||||||||||||| ||||  ||| || ||||||||||||| | |||| |||||  || ||||||||||||||||||||||||||||||||    
T  17324388 tgttttctacttttggcttgtgtttataattttttcatacactttgttat-ggttgcttgattattccttgctccacacatcaagtttgttattggtg 17324484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 18307423 - 18307543
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| | | |  |||  ||||||||||||||||||||||||||| |||     
T  18307423 tgttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcctaattatcatttgctccacacatcaagtttgttattgatgta 18307521  T
Q  128 attt-tcatagaattcgcaaca 148  Q
     ||| |||| ||||||||||||    
T  18307522 ttttctcatcgaattcgcaaca 18307543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 29 - 127
Target Start/End: Complemental strand, 38925451 - 38925350
Alignment:
Q  29 ttgttttctacttttggcttgtattta--attgttccatacactttg-tttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtg 125  Q
    |||||||||||||||||||||| ||||  | |||||||||||||||| ||||||||| | |||  ||| ||| ||||||||||||||||| |||||||||    
T  38925451 ttgttttctacttttggcttgtgtttataaatgttccatacactttgatttttggttgcctgattatcacttactccacacatcaagtttattattggtg 38925352  T
Q  126 tg 127  Q
    ||    
T  38925351 tg 38925350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 60 - 148
Target Start/End: Original strand, 16429299 - 16429387
Alignment:
Q  60 ttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||||||||||| |||| | |||  ||| |||||||||||||||||||||||||||||||||| ||||||| |||||| |||||    
T  16429299 ttccatacactttgtttt-ggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaaca 16429387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 17186067 - 17185996
Alignment:
Q  60 ttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgatttt 132  Q
    |||||||||||||||||| |||| |||||| ||| ||||||||||| ||||||||| ||||||||||||||||    
T  17186067 ttccatacactttgtttt-ggttgcttgactatcacttgctccacatatcaagtttattattggtgtgatttt 17185996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 31 - 151
Target Start/End: Original strand, 30780361 - 30780485
Alignment:
Q  31 gttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccaca--catcaagtttgttattggtgt 126  Q
    ||||||||||||||  |||| ||||  |||||| ||||||||||||||| |||| |||||  || |||| |||||||  |||||||||||||||||||||    
T  30780361 gttttctacttttgatttgtgtttataattgtttcatacactttgtttt-ggttgcttgattattccttactccacacacatcaagtttgttattggtgt 30780459  T
Q  127 ga-ttttcatagaattcgcaacagga 151  Q
    || ||||||| |||||| ||||||||    
T  30780460 gagttttcatcgaattcacaacagga 30780485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 41647234 - 41647355
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||| ||||| ||||  ||| || ||||||||||| ||||||||   |||  ||| |||||||| ||||||||||||||||||||||||    
T  41647234 tgttttctacttttgacttgtgtttataattatttcatacactttgattttggttgtctgattatcacttgctccgcacatcaagtttgttattggtgtg 41647333  T
Q  128 attt-tcatagaattcgcaaca 148  Q
     ||| |||| |||||| |||||    
T  41647334 ttttctcatcgaattcacaaca 41647355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 148
Target Start/End: Original strand, 17319203 - 17319321
Alignment:
Q  32 ttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga- 128  Q
    ||||||||||||||||||| ||||  | | |||||||||||||||||| ||||  ||||  || |||| ||||||||||||| ||||||||||||| ||     
T  17319203 ttttctacttttggcttgtgtttataactattccatacactttgtttt-ggttgtttgattattccttactccacacatcaaatttgttattggtgcgat 17319301  T
Q  129 ttttcatagaattcgcaaca 148  Q
    ||||||| |||||| |||||    
T  17319302 ttttcatcgaattcacaaca 17319321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 31422827 - 31422706
Alignment:
Q  30 tgttttctacttttggcttgtattt---aattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgt 126  Q
    ||||||||||||||| ||||| |||   |||| |||| |||||||| |||| | ||  ||||  || ||||||||||||||||||||||||||||| |||    
T  31422827 tgttttctacttttgacttgtgttttataattattccgtacactttattttag-ttgattgattattccttgctccacacatcaagtttgttattgatgt 31422729  T
Q  127 ga-ttttcatagaattcgcaaca 148  Q
    || ||||||| ||||||||||||    
T  31422728 gatttttcatcgaattcgcaaca 31422706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 142
Target Start/End: Complemental strand, 17324573 - 17324484
Alignment:
Q  54 taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga--ttttcatagaattc 142  Q
    ||||||||| || ||||||||| | || | |||||| ||||||| ||||||||||||||||||||||||||||||  ||||||| ||||||    
T  17324573 taattgttctattcactttgttat-ggctgcttgactatcccttactccacacatcaagtttgttattggtgtgagtttttcatcgaattc 17324484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 142
Target Start/End: Complemental strand, 18800543 - 18800429
Alignment:
Q  27 cgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgt 126  Q
    |||||||||||||||||||||||| ||||    |||||||||||||||||| | || |||||  ||   |||||| ||||||||||| | || |||||||    
T  18800543 cgttgttttctacttttggcttgtgtttataacttccatacactttgtttt-gattgcttgattattatttgctctacacatcaagtattttgttggtgt 18800445  T
Q  127 gattttcatagaattc 142  Q
    ||||||||| ||||||    
T  18800444 gattttcatcgaattc 18800429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 32 - 149
Target Start/End: Original strand, 15916706 - 15916822
Alignment:
Q  32 ttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga-tt 130  Q
    ||||||||||||||||||| ||||    |||||||||||||| |||||||| |||||   |  ||||||||||||||||||| | |||||||||||| ||    
T  15916706 ttttctacttttggcttgtgtttataacttccatacactttg-ttttggttgcttgattgttacttgctccacacatcaagtat-ttattggtgtgactt 15916803  T
Q  131 ttcatagaattcgcaacag 149  Q
    ||||| |||||| ||||||    
T  15916804 ttcatcgaattcacaacag 15916822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 149
Target Start/End: Original strand, 40134255 - 40134379
Alignment:
Q  27 cgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccat--cccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||||||||||   |||    |||||||||||||||||| |||| | |||  ||  | |||||||||||||||||||||||||||| |    
T  40134255 cgttgttttctacttttggcttgagattataacttccatacactttgtttt-ggttgcctgattatatcacttgctccacacatcaagtttgttattgat 40134353  T
Q  125 gtga-ttttcatagaattcgcaacag 149  Q
    |||| ||||||| |||||| ||||||    
T  40134354 gtgatttttcatcgaattcacaacag 40134379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 14183574 - 14183455
Alignment:
Q  27 cgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgt 126  Q
    ||||||||||| |||||| ||||| ||||    |||||||||||||||||| |||| |||||  ||  |||||| |||||||||||| | ||||||||||    
T  14183574 cgttgttttcttcttttg-cttgtgtttataacttccatacactttgtttt-ggttgcttgattattacttgcttcacacatcaagtattttattggtgt 14183477  T
Q  127 gattttcatagaattcgcaaca 148  Q
    |||||| || |||||| |||||    
T  14183476 gatttttatcgaattcacaaca 14183455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 30790337 - 30790250
Alignment:
Q  60 ttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||||||||||||| |||| |||||  ||  |||||| ||||||||| || | ||||||||||||||||||| |||||| |||||    
T  30790337 ttccatacactttgtttt-ggttgcttgattattacttgcttcacacatcaggtattttattggtgtgattttcatcgaattcacaaca 30790250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 16432767 - 16432804
Alignment:
Q  95 cttgctccacacatcaagtttgttattggtgtgatttt 132  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  16432767 cttgctccacacatcaaatttgttattggtgtgatttt 16432804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 25128225 - 25128301
Alignment:
Q  67 cactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga-ttttcatagaattc 142  Q
    ||||||| |||||||| |||||  || |||||||| ||||||||||||||||||||  |||| ||||||| ||||||    
T  25128225 cactttgattttggttgcttgattattccttgctctacacatcaagtttgttattgacgtgagttttcattgaattc 25128301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 28279642 - 28279696
Alignment:
Q  95 cttgctccacacatcaagtttgttattggtgtgattttcatagaattcgcaacag 149  Q
    ||||||||||||||||||| | |||||||||||||||| |  |||||| ||||||    
T  28279642 cttgctccacacatcaagtattttattggtgtgatttttaacgaattcacaacag 28279696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 6115074 - 6114970
Alignment:
Q  27 cgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgt 126  Q
    |||||| ||||||||||| ||||||||||    ||||||||| ||| |||| |||| |||||  ||| ||| ||||||||||||||| | |||  |||||    
T  6115074 cgttgtcttctacttttgacttgtatttataacttccatacattttatttt-ggttgcttgattatcactttctccacacatcaagtatattaccggtgt 6114976  T
Q  127 gatttt 132  Q
    ||||||    
T  6114975 gatttt 6114970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 21353251 - 21353214
Alignment:
Q  96 ttgctccacacatcaagtttgttattggtgtgattttc 133  Q
    ||||||||| |||||||||||||||||||||| |||||    
T  21353251 ttgctccacgcatcaagtttgttattggtgtggttttc 21353214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 77
Target Start/End: Complemental strand, 50076643 - 50076591
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttt 77  Q
    |||||||||||||||||  ||||| ||||  ||||||||||||||||||||||    
T  50076643 cgttgttttctacttttaacttgtgtttataattgttccatacactttgtttt 50076591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 10116147 - 10116183
Alignment:
Q  96 ttgctccacacatcaagtttgttattggtgtgatttt 132  Q
    |||||||||||||||||| | ||||||||||||||||    
T  10116147 ttgctccacacatcaagtattttattggtgtgatttt 10116183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 135
Target Start/End: Original strand, 16561845 - 16561881
Alignment:
Q  99 ctccacacatcaagtttgttattggtgtgattttcat 135  Q
    ||||||||||||||| | |||||||||||||||||||    
T  16561845 ctccacacatcaagtattttattggtgtgattttcat 16561881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 142
Target Start/End: Complemental strand, 26519373 - 26519295
Alignment:
Q  60 ttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgattttcatagaattc 142  Q
    |||||||||||||||||  |||| |||||  ||  |||||||||||||  |||| | ||||||||||||||||||| ||||||    
T  26519373 ttccatacactttgttt--ggttgcttgattattacttgctccacaca--aagtattttattggtgtgattttcatcgaattc 26519295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 9e-52; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 3 - 142
Target Start/End: Complemental strand, 23452222 - 23452084
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||  ||||||||||||    
T  23452222 ttctcttctttgtgttcttctcgccgttgttttctacttttagcttgtatttaattgttccatacactttgattttggttgcttgattatcccttgctcc 23452123  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattc 142  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  23452122 acacatcaag-ttgttattggtgtgattttcatcgaattc 23452084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 3 - 145
Target Start/End: Original strand, 27105067 - 27105209
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||  ||||||||||||    
T  27105067 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgcatttaattgttccatacactttg-ttttggttgcttgattatcccttgctcc 27105165  T
Q  103 acacatcaagtttgttattggtgtga-ttttcatagaattcgca 145  Q
    |||||||||||||||||||||||||| ||||||| |||||||||    
T  27105166 acacatcaagtttgttattggtgtgatttttcatcgaattcgca 27105209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 13910030 - 13909907
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||||||| ||||    
T  13910030 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatcccttactcc 13909932  T
Q  103 acacatcaagtttgttattggtgtga 128  Q
    |||||||||| |||||||||||||||    
T  13909931 acacatcaag-ttgttattggtgtga 13909907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 45279978 - 45279844
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatca 110  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||| ||||||||||||||||    
T  45279978 tttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgctccacacatca 45279880  T
Q  111 agtttgttattggtgtgattt-tcatagaattcgcaa 146  Q
    || |||||||||||||||||| |||| ||||||||||    
T  45279879 ag-ttgttattggtgtgatttctcatcgaattcgcaa 45279844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 17849403 - 17849531
Alignment:
Q  26 ccgttgttttctacttttggcttgtatttaa--ttgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattgg 123  Q
    ||||||||||||||||||||||||| |||||  ||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||    
T  17849403 ccgttgttttctacttttggcttgtgtttaaaattgttccatacactttgtttt-ggttgcttgactatcccttgctccacacatcaagtttgttattgg 17849501  T
Q  124 tgtga--ttttcatagaattcgcaacagga 151  Q
    |||||  ||||||| |||||| ||||||||    
T  17849502 tgtgattttttcatcgaattcacaacagga 17849531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 24162208 - 24162084
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||  ||| ||| ||||    
T  24162208 ttctcttctttgtgtttttctcgccgttgttttctacttttggcttgtatttaattgtttcatacacttt-tttttggttgcttgattatctctttctcc 24162110  T
Q  103 acacatcaagtttgttattggtgtgat 129  Q
    |||||||||| ||||||||||||||||    
T  24162109 acacatcaag-ttgttattggtgtgat 24162084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 32 - 148
Target Start/End: Complemental strand, 19501958 - 19501843
Alignment:
Q  32 ttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgattt 131  Q
    ||||||||||||||||||||||||    ||||||||||||||||||||||| |||||  |||||||||||||||||||||| ||||||||||||||||||    
T  19501958 ttttctacttttggcttgtatttataacttccatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt 19501860  T
Q  132 tcatagaattcgcaaca 148  Q
    |||| ||||||||||||    
T  19501859 tcatcgaattcgcaaca 19501843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 42064776 - 42064878
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatca 110  Q
    ||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||| ||||| |||||||||||||||||||||    
T  42064776 tttgtgttcttcttgccgttgttttctactttttgcttgtatttaattgttccatacactttg-ttttagttgcttgatcatcccttgctccacacatca 42064874  T
Q  111 agtt 114  Q
    ||||    
T  42064875 agtt 42064878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 19504291 - 19504178
Alignment:
Q  34 ttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgattttc 133  Q
    ||||||||||||||||||||||    ||||||||||||||||||||||| |||||  |||||||||||||||||||||| ||||||||||||||||||||    
T  19504291 ttctacttttggcttgtatttataacttccatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattttc 19504193  T
Q  134 atagaattcgcaaca 148  Q
    || |||||| |||||    
T  19504192 atcgaattcacaaca 19504178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 19007927 - 19008033
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||  || |||||||||||||||||||||||||||||||    
T  19007927 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgattattccttgctccacacatcaagtttgttattggt 19008025  T
Q  125 gtgatttt 132  Q
    ||||||||    
T  19008026 gtgatttt 19008033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 10 - 148
Target Start/End: Complemental strand, 36558859 - 36558721
Alignment:
Q  10 ctttgtgttcatctcgccgttgttttctactttt-ggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacat 108  Q
    |||||||||| |||||| |||||||||||||||| |||| ||||||||||||||||||| ||||| |||||||| |||||  ||||||||||||||||||    
T  36558859 ctttgtgttcttctcgcagttgttttctactttttggctcgtatttaattgttccatacgctttg-ttttggttgcttgattatcccttgctccacacat 36558761  T
Q  109 caagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||| || |||||||||||| ||||||| |||||| |||||    
T  36558760 caag-ttattattggtgtgatttttcatcgaattcacaaca 36558721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 45332162 - 45332020
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctac-ttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccac 104  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| || || ||||| |||||||| ||| |  |||||||| |||||    
T  45332162 tcttctttgtgttcttctcgccgttgttttctactttttggcttgtatttaattgttacaaacgctttg-ttttggttgcttaattatcccttgttccac 45332064  T
Q  105 acatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||| ||||||||||||||| ||||||| |||||| |||||    
T  45332063 acatcaag-ttgttattggtgtgatttttcatcgaattcacaaca 45332020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 148
Target Start/End: Complemental strand, 21520664 - 21520534
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||||||||  |||||||| | |||  ||| ||||||||||||||||||||||||    
T  21520664 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttaattttggttgcctgattatcacttgctccacacatcaagtttgtt 21520565  T
Q  119 attggtgtgattt-tcatagaattcgcaaca 148  Q
    ||||||||| ||| |||| ||||||||||||    
T  21520564 attggtgtgttttctcatcgaattcgcaaca 21520534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 35217950 - 35217827
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||| ||||| |||||||||||||||||||||||| ||||||||||||| |||||||| ||||| |||||||| ||| |  ||| |||||||||||    
T  35217950 tcttcttt-tgttcttctcgccgttgttttctacttttgacttgtatttaattattccatacgctttg-ttttggttgcttaattatctcttgctccaca 35217853  T
Q  106 catcaagtttgttattggtgtgatttt 132  Q
    ||||||| |||||||||||||||||||    
T  35217852 catcaag-ttgttattggtgtgatttt 35217827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 36561122 - 36560981
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctactttt-ggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccac 104  Q
    |||||||| ||||| |||||| |||||||||||||||| |||| ||||||||||||||||||| ||||| |||||||| |||||  || |||||||||||    
T  36561122 tcttcttt-tgttcttctcgcagttgttttctactttttggctcgtatttaattgttccatacgctttg-ttttggttgcttgattattccttgctccac 36561025  T
Q  105 acatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||| ||||||||||||||| ||||||| |||||| |||||    
T  36561024 acatcaag-ttgttattggtgtgatttttcatcgaattcacaaca 36560981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 30 - 150
Target Start/End: Complemental strand, 28459157 - 28459036
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    |||||||||||||||| |||| ||||  |||||||||||||||||||||| |||| |||||  ||| ||||||||||||||||||| | |||||||||||    
T  28459157 tgttttctacttttggtttgtgtttataattgttccatacactttgtttt-ggttgcttgattatcacttgctccacacatcaagtgttttattggtgtg 28459059  T
Q  128 attttcatagaattcgcaacagg 150  Q
    |||||||| |||||| |||||||    
T  28459058 attttcatcgaattcacaacagg 28459036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 42923475 - 42923373
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||||| ||||| ||||  |||||| |||||||||||||||||||| |||||  ||| ||||||||||||||||||||||||||||||    
T  42923475 cgttgttttctacttttgacttgtgtttataattgtttcatacactttgtttttggttgcttgattatctcttgctccacacatcaagtttgttattggt 42923376  T
Q  125 gtg 127  Q
    |||    
T  42923375 gtg 42923373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 35215573 - 35215450
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||| ||||| |||||||||||||||||||||||| ||||||||||||| || ||||  ||||| |||||||| ||| |  |||||||||||||||    
T  35215573 tcttcttt-tgttcttctcgccgttgttttctacttttgacttgtatttaattatttcatatgctttg-ttttggttgcttaattatcccttgctccaca 35215476  T
Q  106 catcaagtttgttattggtgtgatttt 132  Q
    ||||||| |||||||||||||||||||    
T  35215475 catcaag-ttgttattggtgtgatttt 35215450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 28196925 - 28197028
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| ||||  |||||| ||||||||||||||| |||| || ||| ||||||||||||||||||||| |||||||||||||||    
T  28196925 tgttttctacttttggcttgtgtttataattgtttcatacactttgtttt-ggttgctggactatcccttgctccacacatcaaatttgttattggtgtg 28197023  T
Q  128 atttt 132  Q
    |||||    
T  28197024 atttt 28197028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 22287301 - 22287181
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    |||||||||| |||| ||||| ||||  ||||||||||||||| |||||| |||| |||||| |||||||||||||||||||||||||||||||||||||    
T  22287301 tgttttctacgtttgacttgtttttataattgttccatacactatgtttt-ggttgcttgactatcccttgctccacacatcaagtttgttattggtgtg 22287203  T
Q  128 attt-tcatagaattcgcaaca 148  Q
     ||| |||| |||||| |||||    
T  22287202 ttttctcatcgaattcacaaca 22287181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 21 - 148
Target Start/End: Complemental strand, 43623553 - 43623423
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||||||||||||||| | ||| |||||||||||||||||||  |||||||| | |||  |||  ||||||||||||||||||| |||    
T  43623553 tctcgctgttgttttctacttttggcttatgattataattgttccatacactttaattttggttgcctgattatctattgctccacacatcaagttagtt 43623454  T
Q  119 attggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||| ||||||| ||||||||||||    
T  43623453 attggtgtgatttttcatcgaattcgcaaca 43623423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 3022459 - 3022562
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    ||||||||||| |||||||||||| ||||  |||||||||||||||||||||| |||| |||||  ||| ||||||||||||||||||||||||||| ||    
T  3022459 cgttgttttctgcttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgattatcacttgctccacacatcaagtttgttatttgt 3022557  T
Q  125 gtgat 129  Q
    |||||    
T  3022558 gtgat 3022562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 148
Target Start/End: Complemental strand, 11739532 - 11739421
Alignment:
Q  39 cttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga-ttttcat 135  Q
    |||||| ||||||||||  |||||| ||||||||||||||||  ||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||    
T  11739532 cttttgacttgtatttataattgtttcatacactttgttttta-tttcttgactatcccttgctctacacatcaagtttgttattggtgtgatttttcat 11739434  T
Q  136 agaattcgcaaca 148  Q
     |||||| |||||    
T  11739433 cgaattcacaaca 11739421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 21 - 133
Target Start/End: Complemental strand, 7462919 - 7462806
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||||||||||||||||| ||| |||||||| ||||||||||||||| |||| |||||  |||| |||||||||||||||||||||||    
T  7462919 tctcgctgttgttttctacttttggcttgtgattataattgtttcatacactttgtttt-ggttgcttgattatcctttgctccacacatcaagtttgtt 7462821  T
Q  119 attggtgtgattttc 133  Q
    || | |||| |||||    
T  7462820 atcgatgtggttttc 7462806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 38020370 - 38020473
Alignment:
Q  30 tgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    |||||||||||||| |||||| ||| |||||||||||||||||||||||| |||| |||||  || |||||||||| ||||||| |||||||||||||||    
T  38020370 tgttttctacttttagcttgtgattataattgttccatacactttgtttt-ggttgcttgattattccttgctccatacatcaaatttgttattggtgtg 38020468  T
Q  128 atttt 132  Q
    |||||    
T  38020469 atttt 38020473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 22162992 - 22162868
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    ||||||||||||||||||||||||  |||  | ||||||||||| |||||||| |||| |||||  |||||||||| ||||||||||  |||||||||||    
T  22162992 cgttgttttctacttttggcttgtgcttataactgttccatacaatttgtttt-ggttgcttgattatcccttgcttcacacatcaaaattgttattggt 22162894  T
Q  125 gtgattt-tcatagaattcgcaacag 149  Q
    ||| ||| |||| |||||||||||||    
T  22162893 gtgttttctcatcgaattcgcaacag 22162868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 6264116 - 6263993
Alignment:
Q  27 cgttgttttctacttttggcttgtatt--taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||| ||||||| ||  |||||||||||||||||||||||| |||| | |||   || ||||||||||||||||||||||||||| ||    
T  6264116 cgttgttttctactttcggcttgtgttaataattgttccatacactttgtttt-ggttgcctgatagtcacttgctccacacatcaagtttgttattagt 6264018  T
Q  125 gtgattt-tcatagaattcgcaaca 148  Q
    ||| ||| |||| |||||| |||||    
T  6264017 gtgttttctcatcgaattcacaaca 6263993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 149
Target Start/End: Original strand, 14837558 - 14837680
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagt-ttgttattggtgt 126  Q
    |||||| |||||||||||||| ||||  ||||||| |||||||||||||| |||| |||||  ||| ||||||||||||||||||| ||||||||| |||    
T  14837558 tgttttatacttttggcttgtgtttataattgttctatacactttgtttt-ggttgcttgattatcacttgctccacacatcaagtattgttattgatgt 14837656  T
Q  127 gattt-tcatagaattcgcaacag 149  Q
    ||||| |||| |||||| ||||||    
T  14837657 gatttctcatcgaattcacaacag 14837680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 15539497 - 15539396
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    ||||||||||||||||| |||||| ||||  ||||||| |||||||||||||| | || |||||  |||| |||||||||||||||||||||||||||||    
T  15539497 cgttgttttctactttttgcttgtgtttataattgttcaatacactttgtttt-gattgcttgataatcc-ttgctccacacatcaagtttgttattggt 15539400  T
Q  125 gtga 128  Q
    ||||    
T  15539399 gtga 15539396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 54 - 148
Target Start/End: Original strand, 42453798 - 42453890
Alignment:
Q  54 taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    ||||||||||||||| ||| |||| |||| |||||  ||| |||||||||||||||||||| |||||||||||||||||||| |||||| |||||    
T  42453798 taattgttccatacattttatttt-ggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgattttcatcgaattcacaaca 42453890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 6258782 - 6258687
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||| |||||| ||||  ||||||||| |||||||||||| |||| | |||  ||| ||||||||||||||||||||||||||||||    
T  6258782 tgttttctacttttagcttgtgtttataattgttccagacactttgtttt-ggttgcctgattatcacttgctccacacatcaagtttgttattggt 6258687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 60 - 148
Target Start/End: Original strand, 22874431 - 22874519
Alignment:
Q  60 ttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||||||||||| | || |||||| ||| ||||||||||||||||||||| |||||||||||| ||||||| |||||| |||||    
T  22874431 ttccatacactttgttttag-ttgcttgactatcacttgctccacacatcaagtttattattggtgtgatttttcatcgaattcacaaca 22874519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 5375308 - 5375218
Alignment:
Q  32 ttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttatt 121  Q
    |||| |||||||| ||||||||||  |||||||||||||||||||||| | || |||||  ||||||| |||||||||||||||||||||||    
T  5375308 ttttttacttttgacttgtatttataattgttccatacactttgtttt-gattgcttgattatcccttactccacacatcaagtttgttatt 5375218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 22707716 - 22707595
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    |||||||||||| || ||||| ||||  |||||||||||||||||||||| |||| |||||   | |||| ||||||||||||| |||||||||||||||    
T  22707716 tgttttctacttctgccttgtgtttataattgttccatacactttgtttt-ggttgcttgattgttccttactccacacatcaaatttgttattggtgtg 22707618  T
Q  128 attt--tcatagaattcgcaaca 148  Q
     |||  |||| ||||||||||||    
T  22707617 gttttctcatcgaattcgcaaca 22707595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 45238916 - 45238842
Alignment:
Q  75 ttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||| |||||| ||| |||| |||||||||||||||| |||||||||||| ||||||| ||||||||||||    
T  45238916 ttttggttgcttgactatcgcttggtccacacatcaagtttattattggtgtgatttttcatcgaattcgcaaca 45238842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 127
Target Start/End: Complemental strand, 34979554 - 34979456
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||| ||| | ||||  ||||||||||||||||| |||| |||| ||| |  || |||| |||||||||||||||||||||||||||||    
T  34979554 tgttttctacttttgacttatgtttataattgttccatacactttatttt-ggttgctttattattccttactccacacatcaagtttgttattggtgtg 34979456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 22407419 - 22407346
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||| |||||||| |||||| ||| ||||||||    
T  22407419 tgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgactatctcttgctcc 22407346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 42453041 - 42453086
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctacttttggcttgtatttaa 56  Q
    ||||||||| ||||||| |||||||||| |||||||||||||||||    
T  42453041 tttgtgttcttctcgcctttgttttctatttttggcttgtatttaa 42453086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 127
Target Start/End: Complemental strand, 42923347 - 42923315
Alignment:
Q  95 cttgctccacacatcaagtttgttattggtgtg 127  Q
    |||||||||||||||||||||||||||||||||    
T  42923347 cttgctccacacatcaagtttgttattggtgtg 42923315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 11578077 - 11577975
Alignment:
Q  27 cgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgt 126  Q
    |||||||||||||||||||||||| |||||   ||||||| |||||  |||||||| |||||  ||  |||| |||||||||||||||| |||||  |||    
T  11578077 cgttgttttctacttttggcttgtgtttaa-acttccatatacttt-attttggttgcttgattattacttgttccacacatcaagttt-ttattaatgt 11577981  T
Q  127 gatttt 132  Q
    ||||||    
T  11577980 gatttt 11577975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 17943813 - 17943850
Alignment:
Q  96 ttgctccacacatcaagtttgttattggtgtgattttc 133  Q
    ||||||||| |||||||||||||||||||||| |||||    
T  17943813 ttgctccacgcatcaagtttgttattggtgtgtttttc 17943850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 114
Target Start/End: Original strand, 17848754 - 17848814
Alignment:
Q  54 taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtt 114  Q
    |||||||| ||||||||  | |||||||| |||||  ||| ||||||||||||||||||||    
T  17848754 taattgtttcatacactgcgattttggttgcttgattatcacttgctccacacatcaagtt 17848814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 20592395 - 20592466
Alignment:
Q  60 ttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgatttt 132  Q
    |||||||||||||||||| |||| |||||  ||  ||||||| |||||||| || | ||||||||||||||||    
T  20592395 ttccatacactttgtttt-ggttgcttgattattacttgctctacacatcacgtattttattggtgtgatttt 20592466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 126
Target Start/End: Original strand, 23871173 - 23871205
Alignment:
Q  94 ccttgctccacacatcaagtttgttattggtgt 126  Q
    |||||||||||||||||| ||||||||||||||    
T  23871173 ccttgctccacacatcaaatttgttattggtgt 23871205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 102; Significance: 1e-50; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 14507161 - 14507018
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||||||||||||    
T  14507161 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatcccttgctcc 14507063  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||||| |||||||||||||||| ||||| ||||| ||||||    
T  14507062 acacatcaag-ttgttattggtgtgatattcatcgaatttgcaaca 14507018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 2628871 - 2628727
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    |||||||||||||| |||||||| |||||  ||||||||||||    
T  2628871 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataacttccatacactttgattttggttgcttgattatcccttgctcc 2628772  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||    
T  2628771 acacatcaag-ttgttattggtgtgattttcatcgaattcgcaaca 2628727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 28241306 - 28241163
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||  ||| ||||||||    
T  28241306 ttctcttctttgtgttcttttcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttgattgcttgattatctcttgctcc 28241208  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||||| |||||||||||||||||||||| |||||| |||||    
T  28241207 acacatcaag-ttgttattggtgtgattttcatcgaattcacaaca 28241163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 33311458 - 33311599
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||| |  |||||||||||||||    
T  33311458 tcttcttt-tgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttaattatcccttgctccaca 33311556  T
Q  106 catcaagtttgttattggtgtgattttcatagaattcgcaacag 149  Q
    ||||||| |||||||||||||||||||||| |||||| ||||||    
T  33311557 catcaag-ttgttattggtgtgattttcatcgaattcacaacag 33311599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 33309189 - 33309329
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||| |  |||||||||||||||    
T  33309189 tcttcttt-tgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttaattatcccttgctccaca 33309287  T
Q  106 catcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    ||||||| |||||||||||||||||||||| |||||| |||||    
T  33309288 catcaag-ttgttattggtgtgattttcatcgaattcacaaca 33309329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 30967530 - 30967673
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||| ||||||| |||||||| |||||  ||| ||||||||    
T  30967530 ttctcttctttgtgttcttctcgccgttgttttctacttttgacttgtatttaattattccatgcactttg-ttttggttacttgattatctcttgctcc 30967628  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||||| |||||||||||||||||||||  ||||||||||||    
T  30967629 acacatcaag-ttgttattggtgtgattttcaacgaattcgcaaca 30967673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 19704552 - 19704422
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt--ctacttttggcttgtatttaattgttccatacactttg-tttttggtttcttgaccatcccttgc 99  Q
    ||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||| |||||  |||||||||    
T  19704552 ttctcttctttgtgttcttctcgccgttgttttttctacttttggcttgtatttaattgttccatacactttgatttttggttgcttgattatcccttgc 19704453  T
Q  100 tccacacatcaagtttgttattggtgtgattt 131  Q
    ||||||||||||| ||||||||||||||||||    
T  19704452 tccacacatcaag-ttgttattggtgtgattt 19704422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 4816216 - 4816088
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctc 101  Q
    ||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||| |||||  |||||||||||    
T  4816216 ttctcttctttgtgttcttctcgccgttgtttttctacttttgacttgtatttaattgttccatacactttg-ttttggttgcttgattatcccttgctc 4816118  T
Q  102 cacacatcaagtttgttattggtgtgatttt 132  Q
    ||||||||||| |||||||||||||||||||    
T  4816117 cacacatcaag-ttgttattggtgtgatttt 4816088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 14458752 - 14458607
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||  |||| || ||||    
T  14458752 ttctcttctttgtgttcttctcgtcgttgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcctgattatccattactcc 14458653  T
Q  103 acacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    ||||||||||  | |||||||||||| ||||||| ||||||||||||    
T  14458652 acacatcaag-ctattattggtgtgatttttcatcgaattcgcaaca 14458607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 1230234 - 1230090
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggc-ttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctc 101  Q
    |||||||| |||||||| ||||||||||||||| |||||||||| ||||||||||||||| ||||||||||  |||||||| |||||  ||| |||| ||    
T  1230234 ttctcttcattgtgttcttctcgccgttgttttatacttttggctttgtatttaattgtttcatacacttt-attttggttgcttgattatctcttgatc 1230136  T
Q  102 cacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    ||||||||||| ||||||||||||||||||| || ||||||||||||    
T  1230135 cacacatcaag-ttgttattggtgtgatttttatcgaattcgcaaca 1230090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 5273197 - 5273073
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||   || ||||||||||| |||||||| |||||  |||||||||||||||    
T  5273197 tcttcttt-tgttcttctcgccgttgttttctacttttggcttgtatttaaaaattacatacactttgattttggttgcttgattatcccttgctccaca 5273099  T
Q  106 catcaagtttgttattggtgtgatttt 132  Q
    ||||||| |||||||||||||||||||    
T  5273098 catcaag-ttgttattggtgtgatttt 5273073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 9020269 - 9020398
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||| | | ||| ||  ||| ||||||||||||||||||||||||    
T  9020269 tctcgctgttgttttctacttttggcttgtatttataattgttccatacactttgttttggttgtct-gattatctcttgctccacacatcaagtttgtt 9020367  T
Q  119 attggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||| ||||||| ||||||||||||    
T  9020368 attggtgtgatttttcatcgaattcgcaaca 9020398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 12195496 - 12195354
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    || ||||| ||||| |||||||| ||| |  |||||||||||||||    
T  12195496 tcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacgctttgattttggttgcttaattatcccttgctccaca 12195397  T
Q  106 catcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    ||||||| ||||||||||||||| ||||||| |||||| |||||    
T  12195396 catcaag-ttgttattggtgtgatttttcatcgaattcacaaca 12195354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 29754690 - 29754548
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctactttt-ggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccac 104  Q
    |||||||| ||||| |||||| |||||||||||||||| |||| ||||||||||||||||||| ||||| |||||||| |||||  ||||||||||||||    
T  29754690 tcttcttt-tgttcttctcgcagttgttttctactttttggctcgtatttaattgttccatacgctttg-ttttggttgcttgattatcccttgctccac 29754593  T
Q  105 acatcaagtttgttattggtgtga-ttttcatagaattcgcaacag 149  Q
    |||||||| ||||||||||||||| ||||||| |||||| ||||||    
T  29754592 acatcaag-ttgttattggtgtgatttttcatcgaattcacaacag 29754548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 30728789 - 30728686
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||| ||||||||||  |||||||||||||||||||||| ||||  ||||| |||||||||||||||||||||||||||||||||||||    
T  30728789 tgttttctacttttgacttgtatttataattgttccatacactttgtttt-ggttgtttgactatcccttgctccacacatcaagtttgttattggtgtg 30728691  T
Q  128 atttt 132  Q
    |||||    
T  30728690 atttt 30728686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 26066102 - 26065961
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctactttt-ggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccac 104  Q
    |||||||| ||||| |||||| |||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| ||| |  ||||||||||||||    
T  26066102 tcttcttt-tgttcttctcgcagttgttttctactttttggcttgtatttaattgttccatacgctttg-ttttggttgcttaattatcccttgctccac 26066005  T
Q  105 acatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||| ||||||||||||||| ||||||| |||||| |||||    
T  26066004 acatcaag-ttgttattggtgtgatttttcatcgaattcacaaca 26065961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 26068376 - 26068235
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctactttt-ggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccac 104  Q
    |||||||| ||||| |||||| |||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| ||| |  ||||||||||||||    
T  26068376 tcttcttt-tgttcttctcgcagttgttttctactttttggcttgtatttaattgttccatacgctttg-ttttggttgcttaattatcccttgctccac 26068279  T
Q  105 acatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||| ||||||||||||||| ||||||| |||||| |||||    
T  26068278 acatcaag-ttgttattggtgtgatttttcatcgaattcacaaca 26068235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 20915342 - 20915214
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctc 101  Q
    ||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||| || ||||||||||| |||||||| |||||  | ||||||| |    
T  20915342 ttctcttctttgtgttcttctcgtcgttgtttttctacttttggcttgtatttaattatttcatacactttg-ttttggttgcttgattaccccttgccc 20915244  T
Q  102 cacacatcaagtttgttattggtgtgatttt 132  Q
    ||||||||||| || ||||||||||||||||    
T  20915243 cacacatcaag-ttattattggtgtgatttt 20915214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 24338418 - 24338295
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    ||||||||||||||||||| |||| ||||  |||||||||||||||||||||| |||| |||||| ||| |||||||||||||||||||||||||||| |    
T  24338418 cgttgttttctacttttggtttgtgtttataattgttccatacactttgtttt-ggttgcttgactatctcttgctccacacatcaagtttgttattgat 24338320  T
Q  125 gtga-ttttcatagaattcgcaaca 148  Q
    |||| ||||||| |||||| |||||    
T  24338319 gtgatttttcatcgaattcacaaca 24338295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 30034590 - 30034447
Alignment:
Q  1 tattctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgct 100  Q
    |||| |||||||||||||| ||||||| ||||||||||||||| |||||||||||    || |||||||||||  ||||||| |||||  || |||||||    
T  30034590 tattatcttctttgtgttcttctcgccattgttttctacttttagcttgtatttataactttcatacactttg--tttggttgcttgattat-ccttgct 30034494  T
Q  101 ccacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    ||| |||||||| |||||||||||||||||||||| ||||||||||||    
T  30034493 ccatacatcaag-ttgttattggtgtgattttcatcgaattcgcaaca 30034447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 26932545 - 26932420
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccac 104  Q
    |||||||||||||| ||||||||||||||| |||| |||||||||||||||    || ||||||||||||||| |||| |||||  ||||||||||||||    
T  26932545 tcttctttgtgttcttctcgccgttgtttttctacctttggcttgtatttataactttcatacactttgtttt-ggttgcttgattatcccttgctccac 26932447  T
Q  105 acatcaagtttgttattggtgtgatttt 132  Q
    |||||||| |||||||||||||||||||    
T  26932446 acatcaag-ttgttattggtgtgatttt 26932420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 3394716 - 3394837
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||||||||||||| |||||  |||| || |||||||||||||| || |||||||||||    
T  3394716 tgttttctacttttggcttgtgtttataattgttccatacactttgtttttggttgcttgattatccatttctccacacatcaagatttttattggtgtg 3394815  T
Q  128 attt-tcatagaattcgcaaca 148  Q
     ||| |||| ||||||||||||    
T  3394816 ttttctcatcgaattcgcaaca 3394837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 21 - 148
Target Start/End: Complemental strand, 11983000 - 11982872
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||| |||||  || ||||||||||||||||||| |||||    
T  11983000 tctcgctgttgttttctacttttggcttgtgattgtaattgttccatacactttg-ttttggttgcttgattattccttgctccacacatcaag-ttgtt 11982903  T
Q  119 attggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||||| ||||||| |||||| |||||    
T  11982902 attggtgtgatttttcatcgaattcacaaca 11982872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 32 - 148
Target Start/End: Original strand, 15367380 - 15367498
Alignment:
Q  32 ttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga- 128  Q
    ||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||  ||| | ||||||||||||||||||||||||||||||||     
T  15367380 ttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgattatcacatgctccacacatcaagtttgttattggtgtgat 15367478  T
Q  129 ttttcatagaattcgcaaca 148  Q
    ||||||| |||||| |||||    
T  15367479 ttttcatcgaattcacaaca 15367498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 15346691 - 15346796
Alignment:
Q  28 gttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtg 125  Q
    ||||||||||||||||||||||| ||||  ||||||||||| |||||||||| |||| |||||  ||| |||| ||||||||||||||||||||||||||    
T  15346691 gttgttttctacttttggcttgtgtttataattgttccatatactttgtttt-ggttgcttgattatcacttgttccacacatcaagtttgttattggtg 15346789  T
Q  126 tgatttt 132  Q
    |||||||    
T  15346790 tgatttt 15346796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 26065320 - 26065438
Alignment:
Q  15 tgttcatctcgccgttgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaag 112  Q
    ||||| ||| || ||||||||||||||||||| ||| ||| ||| |||||||||| ||||| |||||||| |||||| ||||||||||||||||||||||    
T  26065320 tgttcttcttgctgttgttttctacttttggcatgtgattataactgttccatacgctttgattttggttgcttgactatcccttgctccacacatcaag 26065419  T
Q  113 tttgttattggtgtgatttt 132  Q
     |||||||||||||||||||    
T  26065420 -ttgttattggtgtgatttt 26065438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 26085289 - 26085407
Alignment:
Q  15 tgttcatctcgccgttgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaag 112  Q
    ||||| ||| || ||||||||||||||||||| ||| ||| ||| |||||||||| ||||| |||||||| |||||| ||||||||||||||||||||||    
T  26085289 tgttcttcttgctgttgttttctacttttggcatgtgattataactgttccatacgctttgattttggttgcttgactatcccttgctccacacatcaag 26085388  T
Q  113 tttgttattggtgtgatttt 132  Q
     |||||||||||||||||||    
T  26085389 -ttgttattggtgtgatttt 26085407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 3629835 - 3629711
Alignment:
Q  27 cgttgttttctactttt-ggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattgg 123  Q
    ||||||||||||||||| ||||||| ||||  |||||||||||||||||||||| |||| |||||  |||| ||||||||||||||||||||||||||||    
T  3629835 cgttgttttctactttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgattatcctttgctccacacatcaagtttgttattgg 3629737  T
Q  124 tgtgattt-tcatagaattcgcaaca 148  Q
    |||| ||| |||| |||||| |||||    
T  3629736 tgtgttttctcatcgaattcacaaca 3629711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 3631904 - 3631784
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| | | |  ||| |||||||||||| ||||||||||||||||||||    
T  3631904 tgttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcctaattatcacttgctccacacgtcaagtttgttattggtgtg 3631806  T
Q  128 -attttcatagaattcgcaaca 148  Q
      ||||||| |||||| |||||    
T  3631805 ttttttcatcgaattcacaaca 3631784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 15541064 - 15540990
Alignment:
Q  75 ttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||| ||| ||||||||    
T  15541064 ttttggtttcttgactatcccttgctccacacatcaagtttgttattggtttgatttttcatcgaagtcgcaaca 15540990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 63 - 148
Target Start/End: Original strand, 18322482 - 18322566
Alignment:
Q  63 catacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    ||||||||||||||| |||| |||||  |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  18322482 catacactttgtttt-ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatagaattcgcaaca 18322566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 148
Target Start/End: Complemental strand, 3233697 - 3233567
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| |||||||||||||||||| |||| ||||  |||||| ||| ||||||| |||||||| | |||  ||| ||| ||||||||||||| ||||||    
T  3233697 tctcgctgttgttttctacttttggtttgtgtttataattgtttcatgcactttgattttggttgcctgattatcacttactccacacatcaaatttgtt 3233598  T
Q  119 attggtgtgattt-tcatagaattcgcaaca 148  Q
    |||| |||| ||| |||| ||||||||||||    
T  3233597 attgatgtgttttctcatcgaattcgcaaca 3233567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 128
Target Start/End: Complemental strand, 15530129 - 15530027
Alignment:
Q  28 gttgttttctacttttggcttgtatt--taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtg 125  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||   ||||| ||   |||  || |||| |||||||||||||||||||||||||||    
T  15530129 gttgttttctacttttggcttgtatttataattgttccatacacttaaattttgattgtctgattattccttactccacacatcaagtttgttattggtg 15530030  T
Q  126 tga 128  Q
    |||    
T  15530029 tga 15530027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 1069683 - 1069588
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||| |||||| ||||  |||||||||||||||||||||| | || |||||| ||||||||||||| ||||| | ||||||||||||    
T  1069683 tgttttctactttttgcttgtgtttataattgttccatacactttgtttt-gattgcttgactatcccttgctccatacatcgaatttgttattggt 1069588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 13057587 - 13057659
Alignment:
Q  77 ttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||| |||||  |||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  13057587 ttggttgcttgattatcctttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 13057659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 8717268 - 8717195
Alignment:
Q  75 ttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||||| |||||  |||||||||||||||||||||| ||||||||||||||| ||||||| |||||| |||||    
T  8717268 ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcacaaca 8717195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 13040174 - 13040232
Alignment:
Q  91 atcccttgctccacacatcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    |||| |||||||||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  13040174 atccattgctccacacatcaagtttgttattagtgtgatttttcatcgaattcgcaaca 13040232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 133
Target Start/End: Original strand, 10584355 - 10584396
Alignment:
Q  92 tcccttgctccacacatcaagtttgttattggtgtgattttc 133  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  10584355 tcccttgctccacacatcaagtttgttattggtgtggttttc 10584396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 22611086 - 22611139
Alignment:
Q  96 ttgctccacacatcaagtttgttattggtgtgattttcatagaattcgcaacag 149  Q
    |||||||||||||||||| | ||||||||||||||||||| ||| |||||||||    
T  22611086 ttgctccacacatcaagtattttattggtgtgattttcatcgaactcgcaacag 22611139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 14466717 - 14466774
Alignment:
Q  75 ttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgatttt 132  Q
    |||||||| |||||| ||| |||||| |||||||||| ||| ||||||||||||||||    
T  14466717 ttttggttgcttgactatcacttgctgcacacatcaaatttattattggtgtgatttt 14466774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 148
Target Start/End: Original strand, 17012387 - 17012502
Alignment:
Q  32 ttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga-tt 130  Q
    ||||||||||||||||||| ||| |  |||| |||||||||||||| |||| |||||  ||   |||||||||||||||||| | |||||| ||||| ||    
T  17012387 ttttctacttttggcttgtgttttaacgttc-atacactttgtttt-ggttgcttgattattatttgctccacacatcaagtattttattgttgtgattt 17012484  T
Q  131 ttcatagaattcgcaaca 148  Q
    ||||| |||||| |||||    
T  17012485 ttcatcgaattcacaaca 17012502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 22491005 - 22491062
Alignment:
Q  75 ttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgatttt 132  Q
    |||||||| |||||  |||| | ||||||||||| |||||||||||||||||||||||    
T  22491005 ttttggttgcttgattatccttagctccacacattaagtttgttattggtgtgatttt 22491062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 25480227 - 25480346
Alignment:
Q  30 tgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||| ||||| ||| |||||||| ||||||||||  |||||||| || ||| ||||||| ||| ||||||||| | | |||||||||||    
T  25480227 tgttttctacttttgacttgtgattataattgtttcatacacttt-attttggttgctcgactatcccttactctacacatcaaatat-ttattggtgtg 25480324  T
Q  128 a-ttttcatagaattcgcaaca 148  Q
    | ||||||| |||||| |||||    
T  25480325 atttttcatcgaattcacaaca 25480346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 6610414 - 6610362
Alignment:
Q  96 ttgctccacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    ||||||||||||| |||| | |||||||||||||||||| ||||||| |||||    
T  6610414 ttgctccacacattaagtattttattggtgtgattttcaaagaattcacaaca 6610362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 142
Target Start/End: Original strand, 15720020 - 15720099
Alignment:
Q  60 ttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgattttcatagaattc 142  Q
    ||||||||||||| |||||| || |||||| ||| |||   ||||||||||||||| ||||||  ||||||||||| ||||||    
T  15720020 ttccatacactttatttttgattgcttgactatcactt---ccacacatcaagtttattattgacgtgattttcatcgaattc 15720099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 25465496 - 25465444
Alignment:
Q  96 ttgctccacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||| ||||||||| | ||||||||||||||||||| |||||| |||||    
T  25465496 ttgctccatacatcaagtattttattggtgtgattttcatcgaattcacaaca 25465444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 19696851 - 19696889
Alignment:
Q  96 ttgctccacacatcaagtttgttattggtgtgattttca 134  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  19696851 ttgctccacacatcaagtattttattggtgtgattttca 19696889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 28078100 - 28078064
Alignment:
Q  96 ttgctccacacatcaagtttgttattggtgtgatttt 132  Q
    |||||||||||||||||| | ||||||||||||||||    
T  28078100 ttgctccacacatcaagtattttattggtgtgatttt 28078064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 29473 - 29617
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||| ||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||| || |||||  ||||||||||||    
T  29473 ttctcttttttgtgttcttctctccgttgttttctacttttggcttttatttaattgttccatacactttg-ttttgattgcttgattatcccttgctcc 29571  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaacag 149  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||    
T  29572 acacatcaag-ttgttattggtgtgattttcatcgaattcgcaacag 29617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 41468 - 41325
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||  ||| ||||||||    
T  41468 ttctcttctttgtgttcttttcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttgattgcttgattatctcttgctcc 41370  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    |||||||||| |||||||||||||||||||||| |||||| |||||    
T  41369 acacatcaag-ttgttattggtgtgattttcatcgaattcacaaca 41325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 69277 - 69132
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    ||||||||| |||||||| |||| | |||  ||||||||||||    
T  69277 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataacttccatacattttgtttt-ggttgcctgattatcccttgctcc 69179  T
Q  103 acacatcaagtttgttattggtgtgattttcatagaattcgcaacag 149  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  69178 acacatcaagtttgttattggtgtgattttcatcgaattcacaacag 69132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 88; Significance: 3e-42; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 183626 - 183481
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||| |||||  ||| ||||||||    
T  183626 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacattttg-tttcggttgcttgattatctcttgctcc 183528  T
Q  103 acacatcaagtttgttattggtgtgattt-tcatagaattcgcaacag 149  Q
    |||||||||| |||||||||||||||||| |||| ||||||| |||||    
T  183527 acacatcaag-ttgttattggtgtgatttctcatcgaattcggaacag 183481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 50335 - 50457
Alignment:
Q  28 gttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtg 125  Q
    ||||||||||||||||||||||| ||||  |||||| ||||||||||||||| |||| |||||  |||||||||||||||||||||||||||||||||||    
T  50335 gttgttttctacttttggcttgtgtttataattgtttcatacactttgtttt-ggttgcttgattatcccttgctccacacatcaagtttgttattggtg 50433  T
Q  126 tga-ttttcatagaattcgcaaca 148  Q
    ||| ||||||| ||||||||||||    
T  50434 tgatttttcatcgaattcgcaaca 50457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 52334 - 52456
Alignment:
Q  28 gttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtg 125  Q
    ||||||||||||||||||||||| ||||  |||||| ||||||||||||||| |||| |||||  |||||||||||||||||||||||||||||||||||    
T  52334 gttgttttctacttttggcttgtgtttataattgtttcatacactttgtttt-ggttgcttgattatcccttgctccacacatcaagtttgttattggtg 52432  T
Q  126 tga-ttttcatagaattcgcaaca 148  Q
    ||| ||||||| ||||||||||||    
T  52433 tgatttttcatcgaattcgcaaca 52456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 332 - 455
Alignment:
Q  8 ttctttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacac 106  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||| |||||  ||||||||||||||||    
T  332 ttctttgtgttcttctcgccgttgtttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacac 431  T
Q  107 atcaagtttgttattggtgtgattt 131  Q
    |||||| ||||||||||||||||||    
T  432 atcaag-ttgttattggtgtgattt 455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 1433 - 1309
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  |||  || |||||||    
T  1433 tcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatctttttctccaca 1335  T
Q  106 catcaagtttgttattggtgtgatttt 132  Q
    ||||||| |||||||||||||||||||    
T  1334 catcaag-ttgttattggtgtgatttt 1309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 1438 - 1310
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctc 101  Q
    |||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||| |||||  ||| |||||||    
T  1438 ttctcttctttgtgatcttctcgccgttgtttttctacttttggcttgtatttaattgttacatacactttg-ttttggttgcttgattatctcttgctc 1340  T
Q  102 cacacatcaagtttgttattggtgtgatttt 132  Q
    ||||||||||| |||||||||||||||||||    
T  1339 cacacatcaag-ttgttattggtgtgatttt 1310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 21 - 146
Target Start/End: Original strand, 35909 - 36037
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||| | ||||||||||| ||||  |||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  35909 tctcgctgttgttttcgagttttggcttgtgtttataattgtttcatacactttgtttttggttgcttgactatcccttgctccacacatcaagtttgtt 36008  T
Q  119 attggtgtga-ttttcatagaattcgcaa 146  Q
    |||||||| | ||||||| ||||||||||    
T  36009 attggtgtaatttttcatcgaattcgcaa 36037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 6506 - 6646
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccaca 105  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||| ||| |||||||| ||||| |||||||| ||| |  |||||||||||||||    
T  6506 tcttcttt-tgttcttctcgccgttgttttctacttttggcttgtattt-attattccatacgctttgattttggttgcttaattatcccttgctccaca 6603  T
Q  106 catcaagtttgttattggtgtga-ttttcatagaattcgcaaca 148  Q
    ||||||| ||||||||||||||| ||||||| |||||| |||||    
T  6604 catcaag-ttgttattggtgtgatttttcatcgaattcacaaca 6646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 79508 - 79631
Alignment:
Q  28 gttgttttctacttttggcttgt-att-taattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtg 125  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||| | | |  |||||||||||||||||||||||||||||||||||    
T  79508 gttgttttctacttttggcttgtgattataattgttccatacactttgattttggttgcctaattatcccttgctccacacatcaagtttgttattggtg 79607  T
Q  126 tga-ttttcatagaattcgcaaca 148  Q
    ||| ||||||| ||||||||||||    
T  79608 tgatttttcattgaattcgcaaca 79631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 3182 - 3319
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctac-ttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctc 101  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||    || |||||||||||  ||||||| |||||  |||||||||||    
T  3182 ttctcttctttgtgttcttctcgccgttgttttctactttttgacttgtatttataactttcatacactttg--tttggttgcttgattatcccttgctc 3279  T
Q  102 cacacatcaagtttgttattggtgtgattttcatagaattc 142  Q
    ||||||||||| |||||||||||||||||||||| ||||||    
T  3280 cacacatcaag-ttgttattggtgtgattttcatcgaattc 3319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 14349 - 14231
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||  |||||||||||||||||||||| ||||||||||||||    
T  14349 tgttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 14252  T
Q  128 attttcatagaattcgcaaca 148  Q
    |||||||| |||||| |||||    
T  14251 attttcatcgaattcacaaca 14231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 132
Target Start/End: Original strand, 15393 - 15422
Alignment:
Q  103 acacatcaagtttgttattggtgtgatttt 132  Q
    ||||||||||||||||||||||||||||||    
T  15393 acacatcaagtttgttattggtgtgatttt 15422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0891 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0891
Description:

Target: scaffold0891; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 4650 - 4535
Alignment:
Q  15 tgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtt 114  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||  ||| ||| |||||  ||||||| |||||||||||||  |    
T  4650 tgttcttctcgccattgttttctacttttggcttgtatttaattgttccatacgctttgacttt-gttgcttgattatcccttactccacacatcaa-at 4553  T
Q  115 tgttattggtgtgatttt 132  Q
    ||||||||||||||||||    
T  4552 tgttattggtgtgatttt 4535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 27 - 146
Target Start/End: Original strand, 85549 - 85671
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggt 124  Q
    |||||||||||||||||| ||||| ||||  |||||||||||||||||| ||||||||  ||||  ||| |||||||||||||| ||| |||||||||||    
T  85549 cgttgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgtttgattatctcttgctccacacattaagattgttattggt 85648  T
Q  125 gtga-ttttcatagaattcgcaa 146  Q
    |||| ||||||| ||||||||||    
T  85649 gtgatttttcatcgaattcgcaa 85671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 80175 - 80305
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgtt 118  Q
    |||||| ||||||||||||||||||||||| ||||  ||| |||||||||||||| |||| ||| | |||  ||  ||||||||||||||||||||||||    
T  80175 tctcgctgttgttttctacttttggcttgtgtttataatttttccatacactttgattttcgttgcctgattattacttgctccacacatcaagtttgtt 80274  T
Q  119 attggtgtgattt-tcatagaattcgcaaca 148  Q
    ||||||||| ||| |||| ||||||||||||    
T  80275 attggtgtgttttctcatcgaattcgcaaca 80305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 132
Target Start/End: Original strand, 24723 - 24822
Alignment:
Q  32 ttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgattt 131  Q
    |||||||||||||||| |||||| ||| |||||||| ||||| |||||||| ||| |  |||||||||||||||||||||| ||||||||||||||||||    
T  24723 ttttctacttttggctcgtattttattattccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattt 24821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 132
Target Start/End: Original strand, 22448 - 22547
Alignment:
Q  32 ttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtgattt 131  Q
    |||||||||||||||| |||||| ||| |||||| | ||||| |||||||| ||| |  |||||||||||||||||||||| ||||||||||||||||||    
T  22448 ttttctacttttggctcgtattttattattccatgcgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattt 22546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 148
Target Start/End: Complemental strand, 12841 - 12715
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttat 120  Q
    ||||||||||||| |||||||||||||||||||||    || ||||||||||| |||||||| |||||  |||||||||||||||||||||| |||||||    
T  12841 tctcgccgttgttgtctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttat 12744  T
Q  121 tggtgtga-ttttcatagaattcgcaaca 148  Q
    |||||| | ||||||| |||||| |||||    
T  12743 tggtgtcatttttcatcgaattcacaaca 12715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 21 - 147
Target Start/End: Complemental strand, 11445 - 11315
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacactttgtttttg-gtttcttgaccatcccttgctccacacatcaagtttgt 117  Q
    |||||| ||||||||||||||||||||||| ||| ||||||||||||||||||| |||||  ||| ||| |  || |||| |||||||||||||| ||||    
T  11445 tctcgctgttgttttctacttttggcttgtgattataattgttccatacactttattttttcgttgcttaattattccttactccacacatcaag-ttgt 11347  T
Q  118 tattggtgtg--attttcatagaattcgcaac 147  Q
    ||||||||||  |||||||| |||||||||||    
T  11346 tattggtgtgatattttcatcgaattcgcaac 11315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 148
Target Start/End: Complemental strand, 1609 - 1493
Alignment:
Q  29 ttgttttctacttttggcttgtatttaattgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtga 128  Q
    |||||||||||||||||||||| ||||    |||||||||||||||||  |||| |||||  ||  ||||||||||||||||| | | ||||||||||||    
T  1609 ttgttttctacttttggcttgtgtttataacttccatacactttgttt--ggttgcttgattattacttgctccacacatcaaatat-ttattggtgtga 1513  T
Q  129 ttttcatagaattcgcaaca 148  Q
    ||||||| |||||| |||||    
T  1512 ttttcattgaattcacaaca 1493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 127
Target Start/End: Original strand, 4317 - 4415
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggtttcttgaccatcccttgctccacacatcaagtttgttattggtgtg 127  Q
    ||||||||||||||||||||| ||||  ||| ||| ||||||||  |||| | || |||||  ||||||| |||||||||||||||||||||||| ||||    
T  4317 tgttttctacttttggcttgtgtttataattattctatacacttcatttt-gattgcttgattatcccttactccacacatcaagtttgttattgatgtg 4415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 16605 - 16656
Alignment:
Q  96 ttgctccacacatcaagtttgttattggtgtgattttcatagaattcgcaaca 148  Q
    ||||||||| |||||||||| ||||||||||||||||||| |||||| |||||    
T  16605 ttgctccacgcatcaagttt-ttattggtgtgattttcatcgaattcacaaca 16656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1899 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1899
Description:

Target: scaffold1899; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 9 - 45
Alignment:
Q  95 cttgctccacacatcaagtttgttattggtgtgatttt 132  Q
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T  9 cttgctccacacatcaag-ttgttattggtgtgatttt 45  T

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