View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2980_low_12 (Length: 278)
Name: NF2980_low_12
Description: NF2980
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2980_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 8 - 260
Target Start/End: Complemental strand, 48369033 - 48368781
Alignment:
| Q |
8 |
agattatactattgacacttgctatattttaatctgattaggtatgatacaactttcaaaagcattcaatcagtatgaataaacttgtctaatttggtcc |
107 |
Q |
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| T |
48369033 |
agattatactattgacacttgctatattttaatctgattaggtatgatacaactttcaaaagcattcaatcagtatgaataaacttgtctaatttggtcc |
48368934 |
T |
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| Q |
108 |
caaagatggtcaaaccaccaagcataaaatacatccacaaagtaagcacgagtcctcatttcccagaagcatttaaaatattttctttttgttaaaaccg |
207 |
Q |
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| T |
48368933 |
caaagatggtcaaaccaccaagcataaaatacatccacaaagtaagcacgagtcgtcatttcccagaagcatttaaaatattttctttttgttaaaaccg |
48368834 |
T |
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| Q |
208 |
taattgaaagggaaatccatacattattacagatttagatttcatgcagtcaa |
260 |
Q |
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| T |
48368833 |
caattgaaagggaaatccatacattattacagatttggatttcatgcagtcaa |
48368781 |
T |
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