View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2980_low_15 (Length: 253)

Name: NF2980_low_15
Description: NF2980
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2980_low_15
NF2980_low_15
[»] chr7 (11 HSPs)
chr7 (136-241)||(17773381-17773486)
chr7 (1-61)||(17775459-17775519)
chr7 (157-204)||(24069287-24069334)
chr7 (157-208)||(39171479-39171530)
chr7 (157-235)||(8001408-8001486)
chr7 (157-235)||(19404619-19404697)
chr7 (157-235)||(48061573-48061651)
chr7 (157-235)||(48316674-48316752)
chr7 (160-201)||(5348488-5348529)
chr7 (157-201)||(12141204-12141248)
chr7 (157-201)||(34899503-34899547)
[»] chr4 (7 HSPs)
chr4 (157-235)||(10496504-10496582)
chr4 (157-229)||(22806705-22806777)
chr4 (157-235)||(47320274-47320352)
chr4 (155-208)||(6155112-6155165)
chr4 (157-206)||(37465651-37465700)
chr4 (161-229)||(31891155-31891223)
chr4 (157-221)||(44596829-44596893)
[»] scaffold0219 (1 HSPs)
scaffold0219 (157-235)||(14733-14811)
[»] scaffold0064 (1 HSPs)
scaffold0064 (157-235)||(18945-19022)
[»] chr5 (9 HSPs)
chr5 (157-235)||(26825578-26825656)
chr5 (158-233)||(19103331-19103406)
chr5 (157-235)||(38597945-38598023)
chr5 (158-206)||(14211376-14211424)
chr5 (157-221)||(24229660-24229724)
chr5 (157-208)||(13007377-13007428)
chr5 (157-235)||(9113587-9113665)
chr5 (157-235)||(31391615-31391693)
chr5 (157-202)||(28097307-28097352)
[»] chr3 (26 HSPs)
chr3 (157-235)||(9998615-9998693)
chr3 (157-235)||(10108384-10108462)
chr3 (157-235)||(10229624-10229702)
chr3 (157-235)||(10233218-10233296)
chr3 (157-235)||(52922979-52923057)
chr3 (157-235)||(53807720-53807798)
chr3 (157-221)||(21533685-21533749)
chr3 (157-201)||(27856313-27856357)
chr3 (158-221)||(21289690-21289753)
chr3 (157-235)||(628785-628863)
chr3 (157-235)||(4711630-4711708)
chr3 (158-208)||(7546764-7546814)
chr3 (157-235)||(9797396-9797474)
chr3 (157-231)||(20987621-20987695)
chr3 (157-235)||(21313184-21313262)
chr3 (157-223)||(41818363-41818429)
chr3 (157-235)||(42460897-42460975)
chr3 (157-235)||(43017036-43017114)
chr3 (157-235)||(45568307-45568385)
chr3 (157-235)||(48650596-48650674)
chr3 (157-206)||(38860003-38860052)
chr3 (157-229)||(26275687-26275759)
chr3 (157-201)||(26739253-26739297)
chr3 (157-201)||(38142673-38142717)
chr3 (158-206)||(51303534-51303582)
chr3 (158-206)||(51923876-51923924)
[»] chr1 (14 HSPs)
chr1 (157-201)||(7337559-7337603)
chr1 (157-235)||(4413266-4413344)
chr1 (157-235)||(7836658-7836736)
chr1 (157-235)||(24583298-24583376)
chr1 (157-235)||(31317888-31317966)
chr1 (157-235)||(44543424-44543502)
chr1 (157-206)||(35484282-35484331)
chr1 (157-235)||(14872791-14872869)
chr1 (157-199)||(15492439-15492481)
chr1 (157-206)||(37720040-37720089)
chr1 (157-201)||(6217719-6217763)
chr1 (157-229)||(11462350-11462422)
chr1 (157-201)||(19061061-19061105)
chr1 (158-206)||(48750338-48750386)
[»] chr6 (11 HSPs)
chr6 (158-233)||(546182-546257)
chr6 (158-208)||(12170619-12170669)
chr6 (157-206)||(29255337-29255386)
chr6 (157-201)||(30608411-30608455)
chr6 (157-235)||(67863-67941)
chr6 (157-235)||(606354-606432)
chr6 (157-235)||(7515064-7515142)
chr6 (157-235)||(23128768-23128846)
chr6 (157-235)||(33053030-33053108)
chr6 (157-201)||(29319773-29319818)
chr6 (157-201)||(14846117-14846161)
[»] scaffold0026 (1 HSPs)
scaffold0026 (157-235)||(71732-71810)
[»] chr8 (14 HSPs)
chr8 (157-235)||(15344459-15344537)
chr8 (157-235)||(15433524-15433602)
chr8 (157-235)||(15524828-15524906)
chr8 (157-208)||(7677170-7677221)
chr8 (157-208)||(10377840-10377891)
chr8 (157-208)||(43833883-43833934)
chr8 (157-235)||(1236557-1236635)
chr8 (157-235)||(7883101-7883179)
chr8 (157-235)||(31013468-31013546)
chr8 (157-201)||(8826362-8826406)
chr8 (157-221)||(18890573-18890637)
chr8 (157-201)||(20553135-20553179)
chr8 (157-221)||(25190939-25191003)
chr8 (157-201)||(29617168-29617212)
[»] chr2 (15 HSPs)
chr2 (157-235)||(4041457-4041535)
chr2 (157-235)||(5427732-5427810)
chr2 (157-231)||(11985100-11985174)
chr2 (157-235)||(33585598-33585676)
chr2 (157-235)||(38445325-38445403)
chr2 (157-201)||(32190823-32190867)
chr2 (157-231)||(17249014-17249088)
chr2 (157-231)||(37994443-37994517)
chr2 (157-206)||(7646637-7646686)
chr2 (162-235)||(29173580-29173653)
chr2 (157-201)||(9169155-9169199)
chr2 (157-201)||(19597998-19598042)
chr2 (157-201)||(32448513-32448557)
chr2 (157-201)||(33760090-33760134)
chr2 (161-221)||(42698601-42698661)
[»] scaffold0884 (1 HSPs)
scaffold0884 (157-235)||(1835-1913)
[»] scaffold0088 (1 HSPs)
scaffold0088 (157-235)||(50925-51003)
[»] scaffold0127 (1 HSPs)
scaffold0127 (157-221)||(15641-15705)


Alignment Details
Target: chr7 (Bit Score: 86; Significance: 3e-41; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 136 - 241
Target Start/End: Complemental strand, 17773486 - 17773381
Alignment:
Q  136 gtattccagatacctttaatctatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||| ||||||||||| ||    
T  17773486 gtattccagatacctttaatctatcatattatttgtaagcattttactgttgtatgctattaactttggtgttttgaacttcttcataaattcatccatt 17773387  T
Q  236 tatatt 241  Q
    ||||||    
T  17773386 tatatt 17773381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17775519 - 17775459
Alignment:
Q  1 cttttaggtacatgaatagccaggacaaatgttccaatataatacaaataaagtggaagac 61  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17775519 cttttaggtacatgaatagccaggacaaatgttccaatataatactaataaagtggaagac 17775459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 204
Target Start/End: Complemental strand, 24069334 - 24069287
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttgg 204  Q
    |||||||||||||||| ||||||||  |||| ||||||||||||||||    
T  24069334 tatcatattatttgtaggcattttatcgttgtatgctattaactttgg 24069287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 39171530 - 39171479
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgct 208  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||| ||||||    
T  39171530 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgct 39171479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 8001486 - 8001408
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    ||||||||||||| || ||||||| | |||| ||||||||||||| |||||| ||| ||| |||| | ||||| |||||    
T  8001486 tatcatattatttataggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcacccttt 8001408  T

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Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 19404697 - 19404619
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| || |||| | |||||| ||||||||||| | |||| ||| ||| |||| | |||||||||||    
T  19404697 tatcatattatttgtaggctttttgccgttgcacgctattaacttggatgctgtgagtttgttcgcagattcatccttt 19404619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 48061573 - 48061651
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||| |||| | ||| ||| |||| | ||||| |||||    
T  48061573 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttatgagtttgttcgcagattcacccttt 48061651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 48316752 - 48316674
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| |||||||   |||| ||||||||||||| |||||| ||| ||| |||| | ||||| |||||    
T  48316752 tatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcacccttt 48316674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 201
Target Start/End: Complemental strand, 5348529 - 5348488
Alignment:
Q  160 catattatttgtaagcattttactgttgcatgctattaactt 201  Q
    ||||||||||||| ||||||||| |||| |||||||||||||    
T  5348529 catattatttgtaggcattttaccgttgtatgctattaactt 5348488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 12141248 - 12141204
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactt 201  Q
    |||||||||||||||| ||||||| | |||| |||||||||||||    
T  12141248 tatcatattatttgtatgcattttgccgttgtatgctattaactt 12141204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 34899547 - 34899503
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactt 201  Q
    |||||||||||||||| ||||||| | |||| |||||||||||||    
T  34899547 tatcatattatttgtatgcattttgccgttgtatgctattaactt 34899503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 10496504 - 10496582
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| |||| | ||||||||||||| |||||||||| ||| |||| | |||||||||||    
T  10496504 tatcatattatttgtaggcattttgctgtcgtatgctattaacttgggtgctttgagtttgttcgcagattcatccttt 10496582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 22806705 - 22806777
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattca 229  Q
    ||||||||||||||||||||||||  ||||| ||| ||||||||| | |||| ||||||| |||||| |||||    
T  22806705 tatcatattatttgtaagcattttgttgttgtatgttattaacttggatgctatgaatttgttcgtagattca 22806777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 47320352 - 47320274
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||| |||||| ||| ||| |||| | |||||| ||||    
T  47320352 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcattcttt 47320274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 6155165 - 6155112
Alignment:
Q  155 tctatcatattatttgtaagcattttactgttgcatgctattaactttggtgct 208  Q
    |||||||||||||||||| |||||||   |||| ||||||||||||| ||||||    
T  6155165 tctatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgct 6155112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 206
Target Start/End: Original strand, 37465651 - 37465700
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtg 206  Q
    ||||||||||||||||||||||||   |||| ||||||||||||| ||||    
T  37465651 tatcatattatttgtaagcattttgtcgttgtatgctattaacttgggtg 37465700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 229
Target Start/End: Complemental strand, 31891223 - 31891155
Alignment:
Q  161 atattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattca 229  Q
    |||||||||||| ||||||| | |||| ||||||||||||| |||| | ||| ||| |||| |||||||    
T  31891223 atattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcaaattca 31891155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 44596829 - 44596893
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcg 221  Q
    ||||||||||||||||   ||||||| |||| ||||||||||||| |||||| ||| ||| ||||    
T  44596829 tatcatattatttgtagctattttaccgttgtatgctattaacttgggtgctgtgagtttgttcg 44596893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 14811 - 14733
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| || ||  ||||||||||||| |||||| ||| ||| |||| |||||||||||||    
T  14811 tatcatattatttgtatgcattttgctattatatgctattaacttgggtgctgtgagtttgttcgcaaattcatccttt 14733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 19022 - 18945
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| | |||| || ||||||| ||||||||| ||||||| |||||||||||| |||||    
T  19022 tatcatattatttgtatgcattttgccgttgtatactattaa-tttggtgctatgaatttattcgtaaattcacccttt 18945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 26825578 - 26825656
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||| |||||| ||| ||| |||||| ||||| |||||    
T  26825578 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcacccttt 26825656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 19103406 - 19103331
Alignment:
Q  158 atcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatcct 233  Q
    |||||||||||| || ||||||| | |||| |||||||||||||||||||| ||| ||| |||| | |||||||||    
T  19103406 atcatattatttataggcatttttccgttgtatgctattaactttggtgctatgagtttgttcgcagattcatcct 19103331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 38597945 - 38598023
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||| |||| | ||| ||| |||| ||||||| |||||    
T  38597945 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcaaattcacccttt 38598023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 14211376 - 14211424
Alignment:
Q  158 atcatattatttgtaagcattttactgttgcatgctattaactttggtg 206  Q
    ||||||||||||||| ||||||| |||||| ||||||||||||| ||||    
T  14211376 atcatattatttgtaggcatttttctgttgtatgctattaacttgggtg 14211424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 24229724 - 24229660
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcg 221  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||| |||||| ||| ||| ||||    
T  24229724 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcg 24229660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 13007377 - 13007428
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgct 208  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||| ||||||    
T  13007377 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgct 13007428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 9113665 - 9113587
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||| |||| | ||| ||| |||| | ||||| |||||    
T  9113665 tatcatattatttgtaggcatttttccgttgtatgctattaacttgggtgttctgagtttgttcgcagattcacccttt 9113587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 31391693 - 31391615
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    ||||||||||| |||| ||||||| |||||| ||||||||||||| | || | ||| ||| |||| ||||||| |||||    
T  31391693 tatcatattatatgtaggcatttttctgttgtatgctattaacttggatgttgtgagtttgttcgcaaattcacccttt 31391615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 28097307 - 28097352
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaacttt 202  Q
    ||||||||||||||||   |||||||||||| ||||||||||||||    
T  28097307 tatcatattatttgtagttattttactgttgtatgctattaacttt 28097352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 9998615 - 9998693
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||| |||||| ||| ||| |||||| ||||| |||||    
T  9998615 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcacccttt 9998693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 10108384 - 10108462
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||| |||||| ||| ||| |||||| ||||| |||||    
T  10108384 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcacccttt 10108462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 10229624 - 10229702
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||| |||||| ||| ||| |||||| ||||| |||||    
T  10229624 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcacccttt 10229702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 10233218 - 10233296
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||| |||||| ||| ||| |||||| ||||| |||||    
T  10233218 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgtacattcacccttt 10233296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 52923057 - 52922979
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||||| |||| ||||||||||||| | |||| ||| ||| |||| | ||||| |||||    
T  52923057 tatcatattatttgtaggcattttaccgttgtatgctattaacttggctgctgtgagtttgttcgcagattcacccttt 52922979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 53807798 - 53807720
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||| |||| | ||| ||| |||| | |||||||||||    
T  53807798 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtggtgtgagtttgttcgcagattcatccttt 53807720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 21533749 - 21533685
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcg 221  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||| |||||| ||| ||| ||||    
T  21533749 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcg 21533685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 27856313 - 27856357
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactt 201  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||    
T  27856313 tatcatattatttgtaggcatttttccgttgcatgctattaactt 27856357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 21289753 - 21289690
Alignment:
Q  158 atcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcg 221  Q
    ||||||||||||||| ||||||| | |||| ||||||||||||| |||||| ||| ||| ||||    
T  21289753 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcg 21289690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 628863 - 628785
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| | |||| || |||||||||| |||| | ||| ||| |||| | |||||||||||    
T  628863 tatcatattatttgtaggcattttgccgttgtattctattaacttgggtgttgtgagtttgttcgcagattcatccttt 628785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 4711630 - 4711708
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||| |||| | ||| ||| || | | |||||||||||    
T  4711630 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgtttgcagattcatccttt 4711708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 7546764 - 7546814
Alignment:
Q  158 atcatattatttgtaagcattttactgttgcatgctattaactttggtgct 208  Q
    ||||||||||||||| ||||||| | |||| ||||||||||||| ||||||    
T  7546764 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgct 7546814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 9797474 - 9797396
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| |||||||   |||| ||||||||||||| |||||| ||| ||| || ||| ||||| |||||    
T  9797474 tatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgtttgtatattcacccttt 9797396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 20987695 - 20987621
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatc 231  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||| | || | ||| ||| |||||| |||||||    
T  20987695 tatcatattatttgtaggcattttgcagttgtatgctattaacttggatgatgtgagtttgttcgtagattcatc 20987621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 21313184 - 21313262
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    ||||||||||||||||  |||||| | |||| ||||||||||||| |||||| ||| ||| |||| | ||||| |||||    
T  21313184 tatcatattatttgtagccattttgccgttgtatgctattaacttgggtgctgtgagtttgttcggagattcacccttt 21313262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 41818363 - 41818429
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgta 223  Q
    |||| ||||||||||| |||||||  ||||||||||||||||| |||||| | ||| ||| ||||||    
T  41818363 tatcgtattatttgtaggcattttgttgttgcatgctattaacattggtgatgtgagtttgttcgta 41818429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 42460897 - 42460975
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| |||||||  ||||| ||||||||||||| ||| || ||| ||| |||| | ||||| |||||    
T  42460897 tatcatattatttgtaggcattttgttgttgtatgctattaacttgggtactgtgagtttgttcgcagattcacccttt 42460975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 43017036 - 43017114
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||| |||| | ||| ||| |||  | |||||||||||    
T  43017036 tatcatattatttgtaggcattttgccgttgtatgctattaacttaggtgttgtgagtttattcacatattcatccttt 43017114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 45568385 - 45568307
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||| |||| | ||| ||| |||| | ||||| |||||    
T  45568385 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgatgtgagtttattcgcagattcacccttt 45568307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 48650674 - 48650596
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||| |||| | ||| ||| |||| | ||||| |||||    
T  48650674 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcacccttt 48650596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 38860052 - 38860003
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtg 206  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||| ||||    
T  38860052 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtg 38860003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 26275759 - 26275687
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattca 229  Q
    |||||||||||||||| |||||||    ||| |||||||||||||||| ||||| | ||| |||| |||||||    
T  26275759 tatcatattatttgtaggcattttgtcattgtatgctattaactttggcgctttaagtttattcgcaaattca 26275687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 26739297 - 26739253
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactt 201  Q
    ||||||||||||||||||||||||   |||| |||||||||||||    
T  26739297 tatcatattatttgtaagcattttggcgttgtatgctattaactt 26739253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 38142673 - 38142717
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactt 201  Q
    |||||||||||||||| |||||||| ||||| || ||||||||||    
T  38142673 tatcatattatttgtaggcattttattgttgtatactattaactt 38142717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 51303582 - 51303534
Alignment:
Q  158 atcatattatttgtaagcattttactgttgcatgctattaactttggtg 206  Q
    ||||||||||||||| ||||||| | |||| ||||||||||||| ||||    
T  51303582 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtg 51303534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 51923876 - 51923924
Alignment:
Q  158 atcatattatttgtaagcattttactgttgcatgctattaactttggtg 206  Q
    ||||||||||||||| ||||||| | |||| ||||||||||||| ||||    
T  51923876 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtg 51923924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000006; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 7337603 - 7337559
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactt 201  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||    
T  7337603 tatcatattatttgtaggcattttgctgttgcatgctattaactt 7337559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 4413266 - 4413344
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| |||||| |||||||||| ||  ||||| ||||||| |||  | |||||||||||    
T  4413266 tatcatattatttgtaggcattttgctgttgtatgctattaaattgagtgctgtgaatttgttcacagattcatccttt 4413344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 7836736 - 7836658
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| | |||  ||||||||||||| |||||| ||| ||| |||| | |||||||||||    
T  7836736 tatcatattatttgtaggcattttgccgttttatgctattaacttgggtgctgtgagtttgttcgcagattcatccttt 7836658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 24583298 - 24583376
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||| |||| | ||| ||| |||| | |||||||||||    
T  24583298 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgatgtgagtttgttcgcagattcatccttt 24583376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 31317888 - 31317966
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||||  ||||||| |||||||||| |||| | ||| ||| |||| ||||||| |||||    
T  31317888 tatcatattatttgtaggcattttatcgttgcatcctattaacttgggtgatgtgagtttgttcgcaaattcacccttt 31317966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 44543424 - 44543502
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| | |||  ||||||||||||| |||||| ||| ||| |||| | |||||||||||    
T  44543424 tatcatattatttgtaggcattttgccgttttatgctattaacttgggtgctgtgagtttgttcgcagattcatccttt 44543502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 35484331 - 35484282
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtg 206  Q
    |||||||||||||||||||||||| | |||| ||||||||||||| ||||    
T  35484331 tatcatattatttgtaagcattttgccgttgtatgctattaacttgggtg 35484282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 14872791 - 14872869
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||| | |||| ||| ||| |||| | ||||| |||||    
T  14872791 tatcatattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcatattcacccttt 14872869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 15492439 - 15492481
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaac 199  Q
    |||||||||||||||| ||||||||| |||| |||||||||||    
T  15492439 tatcatattatttgtatgcattttaccgttgtatgctattaac 15492481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 37720089 - 37720040
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtg 206  Q
    |||||||||||||||| ||||||| |||| | ||||||||||||| ||||    
T  37720089 tatcatattatttgtaggcatttttctgtggaatgctattaacttgggtg 37720040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 6217763 - 6217719
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactt 201  Q
    |||||||||||||||| | ||||||| |||| |||||||||||||    
T  6217763 tatcatattatttgtaggtattttaccgttgtatgctattaactt 6217719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 11462422 - 11462350
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattca 229  Q
    |||||||||||||||| | |||||   |||| ||||||||||||| |||||| ||| ||| |||||| |||||    
T  11462422 tatcatattatttgtaggaattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgtagattca 11462350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 19061061 - 19061105
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactt 201  Q
    |||||||||||||||| ||||||| | |||| |||||||||||||    
T  19061061 tatcatattatttgtaggcattttgccgttgtatgctattaactt 19061105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 48750338 - 48750386
Alignment:
Q  158 atcatattatttgtaagcattttactgttgcatgctattaactttggtg 206  Q
    ||||||||||||||| ||||||| | |||| ||||||||||||| ||||    
T  48750338 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtg 48750386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 546182 - 546257
Alignment:
Q  158 atcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatcct 233  Q
    ||||||||||||||| ||||||| | |||| ||||||||||||| |||||| ||| ||| |||| | |||||||||    
T  546182 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcct 546257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 12170619 - 12170669
Alignment:
Q  158 atcatattatttgtaagcattttactgttgcatgctattaactttggtgct 208  Q
    ||||||||||||||| ||||||| |||||| ||||||||||||| ||||||    
T  12170619 atcatattatttgtaggcattttgctgttgtatgctattaacttgggtgct 12170669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 29255386 - 29255337
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtg 206  Q
    |||||||||||||||| |||||| ||||||| ||||||||||||| ||||    
T  29255386 tatcatattatttgtaggcatttcactgttgtatgctattaacttgggtg 29255337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 30608455 - 30608411
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactt 201  Q
    |||||||||||||||| ||||||||| |||| |||||||||||||    
T  30608455 tatcatattatttgtaggcattttaccgttgtatgctattaactt 30608411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 67941 - 67863
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    ||||||||||||| || ||||||| | |||| ||||||||||||| |||||| ||| ||| |||| | ||||| |||||    
T  67941 tatcatattatttataggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcacccttt 67863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 606354 - 606432
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| |  ||| ||||||||||||| |||||| ||| ||| |||| | ||||| |||||    
T  606354 tatcatattatttgtaggcattttgccattgtatgctattaacttgggtgctgtgagtttgttcgcagattcacccttt 606432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 7515142 - 7515064
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| ||| || ||||||||||||| | | || ||| ||| |||| ||||||| |||||    
T  7515142 tatcatattatttgtaggcatttttctgctgtatgctattaacttggtttctgtgagtttgttcgcaaattcacccttt 7515064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 23128768 - 23128846
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| | |||| |||||||||| || |||||| ||| ||| |||| | ||||| |||||    
T  23128768 tatcatattatttgtaggcattttgccgttgtatgctattaatttgggtgctgtgagtttgttcgcagattcacccttt 23128846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 33053108 - 33053030
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||| | |||| ||| ||| |||| | ||||| |||||    
T  33053108 tatcatattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcatattcacccttt 33053030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 29319818 - 29319773
Alignment:
Q  157 tatcatattattt-gtaagcattttactgttgcatgctattaactt 201  Q
    ||||||||||||| ||||||||||||| |||| |||||||||||||    
T  29319818 tatcatattattttgtaagcattttaccgttgtatgctattaactt 29319773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 14846161 - 14846117
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactt 201  Q
    |||||||||||||||| ||||||| |||||  |||||||||||||    
T  14846161 tatcatattatttgtaggcattttgctgttttatgctattaactt 14846117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 71810 - 71732
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||| |||||| ||| ||| |||| | ||||| |||||    
T  71810 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcggagattcacccttt 71732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.00000000009; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 15344459 - 15344537
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| |||||||   |||| ||||||||||||| |||||| ||| ||| |||| | |||||||||||    
T  15344459 tatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatccttt 15344537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 15433524 - 15433602
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| |||||||   |||| ||||||||||||| |||||| ||| ||| |||| | |||||||||||    
T  15433524 tatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatccttt 15433602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 15524828 - 15524906
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| |||||||   |||| ||||||||||||| |||||| ||| ||| |||| | |||||||||||    
T  15524828 tatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatccttt 15524906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 7677221 - 7677170
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgct 208  Q
    |||||||||||||||||||||||| | |||| ||| ||||||||| ||||||    
T  7677221 tatcatattatttgtaagcattttgccgttgtatgttattaacttgggtgct 7677170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 10377840 - 10377891
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgct 208  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||| ||||||    
T  10377840 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgct 10377891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 43833934 - 43833883
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgct 208  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||| ||||||    
T  43833934 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgct 43833883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 1236635 - 1236557
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    ||||||| ||||| || ||||||| | |||| ||||||||||||| |||||| ||| ||| |||| | |||||||||||    
T  1236635 tatcatactatttttaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatccttt 1236557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 7883179 - 7883101
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| | |||| || |||||||||| |||||| ||| ||| |||| | ||||| |||||    
T  7883179 tatcatattatttgtaggcattttgccgttgtatcctattaacttgggtgctgtgagtttgttcgcagattcacccttt 7883101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 31013546 - 31013468
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||| |||| | ||| ||| |||| | ||||| |||||    
T  31013546 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcacccttt 31013468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 8826362 - 8826406
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactt 201  Q
    |||||||||| ||||| ||||||||  ||||||||||||||||||    
T  8826362 tatcatattacttgtaggcattttatcgttgcatgctattaactt 8826406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 18890637 - 18890573
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcg 221  Q
    |||||||||||||||| |||||||   |||| ||||||||||||| |||||| ||| ||| ||||    
T  18890637 tatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcg 18890573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 20553179 - 20553135
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactt 201  Q
    |||||||||||||||| ||||||| | |||| |||||||||||||    
T  20553179 tatcatattatttgtaggcattttgccgttgtatgctattaactt 20553135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 25191003 - 25190939
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcg 221  Q
    |||||||||||||||| ||||||| || ||  ||||||||||||| |||||| ||| ||| ||||    
T  25191003 tatcatattatttgtaggcatttttctattttatgctattaacttgggtgctgtgagtttgttcg 25190939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 29617212 - 29617168
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactt 201  Q
    |||||||||||||||| |||||||  ||||| |||||||||||||    
T  29617212 tatcatattatttgtaggcattttgttgttgtatgctattaactt 29617168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.00000000009; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 4041535 - 4041457
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    ||||||||||||||||  |||||| |||||||||||||||||||| |||| | ||| ||| |||| | ||||| |||||    
T  4041535 tatcatattatttgtagccattttgctgttgcatgctattaacttaggtgttgtgagtttgttcgcagattcacccttt 4041457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 5427810 - 5427732
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||| ||||||||||  |||| ||||||||||||| |||||| ||| ||| |||| | ||||| |||||    
T  5427810 tatcatattatttgcaagcattttatcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcacccttt 5427732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 11985174 - 11985100
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatc 231  Q
    |||||||||||||||| ||||||| |||||| || |||||||||| | || | ||||||| |||| |||||||||    
T  11985174 tatcatattatttgtaggcattttgctgttgtatcctattaacttggatgttgtgaatttgttcgcaaattcatc 11985100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 33585676 - 33585598
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||| |||| | ||| ||| |||| | |||||||||||    
T  33585676 tatcatattatttgtatgcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcatattcatccttt 33585598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 38445325 - 38445403
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| |  ||| ||| |||||||||||||||| ||| ||| |||| | |||||||||||    
T  38445325 tatcatattatttgtaggcattttgccattgtatgttattaactttggtgctgtgagtttgttcgcagattcatccttt 38445403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 32190823 - 32190867
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactt 201  Q
    |||||||||||||||||||||||| || ||| |||||||||||||    
T  32190823 tatcatattatttgtaagcatttttctattgtatgctattaactt 32190867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 17249088 - 17249014
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatc 231  Q
    ||||||||||||||||  |||||| | |||| ||||||||||||| |||||| ||| ||| |||| | |||||||    
T  17249088 tatcatattatttgtagacattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatc 17249014  T

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Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 37994443 - 37994517
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatc 231  Q
    |||||||||||||||| ||||||| |||||  ||||||||||||| |||| | ||| ||| |||| | |||||||    
T  37994443 tatcatattatttgtaggcattttgctgttatatgctattaacttgggtgttgtgagtttgttcgcagattcatc 37994517  T

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Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 206
Target Start/End: Original strand, 7646637 - 7646686
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtg 206  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||| ||||    
T  7646637 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtg 7646686  T

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Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 29173653 - 29173580
Alignment:
Q  162 tattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    ||||||||||| |||||||  ||||| ||| |||||||||||||| | ||| ||| |||| | |||||||||||    
T  29173653 tattatttgtatgcattttgttgttgtatgttattaactttggtgttgtgagtttgttcgcagattcatccttt 29173580  T

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Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 9169199 - 9169155
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactt 201  Q
    |||||||||||||||| ||||||| | |||| |||||||||||||    
T  9169199 tatcatattatttgtaggcattttgccgttgtatgctattaactt 9169155  T

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Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 19597998 - 19598042
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactt 201  Q
    ||||||||||||||||  |||||||| |||| |||||||||||||    
T  19597998 tatcatattatttgtagacattttaccgttgtatgctattaactt 19598042  T

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Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 32448557 - 32448513
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactt 201  Q
    |||||||||||||||| ||||||| | |||| |||||||||||||    
T  32448557 tatcatattatttgtaggcattttgccgttgtatgctattaactt 32448513  T

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Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 33760134 - 33760090
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactt 201  Q
    |||||||||||||||| ||||||| |||||| | |||||||||||    
T  33760134 tatcatattatttgtaggcattttgctgttgtaagctattaactt 33760090  T

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Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 42698661 - 42698601
Alignment:
Q  161 atattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcg 221  Q
    |||||||||||| ||||| ||| |||||||| |||||| || |||||| ||||||| ||||    
T  42698661 atattatttgtaggcattataccgttgcatgttattaatttgggtgctgtgaatttattcg 42698601  T

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Target: scaffold0884 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 1913 - 1835
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| |||||| ||| ||||||||| |||| | ||| ||| |||| | ||||| |||||    
T  1913 tatcatattatttgtaggcattttgctgttgtatgttattaacttgggtgttatgagtttgttcgcagattcacccttt 1835  T

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Target: scaffold0088 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 50925 - 51003
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcgtaaattcatccttt 235  Q
    |||||||||||||||| ||||||| |  ||| ||||||||||||| |||||| ||| ||| |||| | ||||| |||||    
T  50925 tatcatattatttgtaggcattttgccattgtatgctattaacttgggtgctgtgagtttgttcgcagattcacccttt 51003  T

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Target: scaffold0127 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 15641 - 15705
Alignment:
Q  157 tatcatattatttgtaagcattttactgttgcatgctattaactttggtgctttgaatttcttcg 221  Q
    |||||||||||||||| ||||||| | |||  ||||||||||||| |||||| ||| ||| ||||    
T  15641 tatcatattatttgtaggcattttgccgttatatgctattaacttgggtgctgtgagtttgttcg 15705  T

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