View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2981_high_4 (Length: 407)
Name: NF2981_high_4
Description: NF2981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2981_high_4 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 354; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 10 - 407
Target Start/End: Original strand, 10237659 - 10238057
Alignment:
| Q |
10 |
atcatcatatgattattgtaattgccatttccttgatatttggctttttcctctcttggaataccatgactaatccattcaagtgtagcatgttgtcctc |
109 |
Q |
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| T |
10237659 |
atcatcatatgattattgtaattgccatttccttgatatttggctttttcctctcttggaataccatgactaatccattcgagtgtagcatgttgtcctc |
10237758 |
T |
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| Q |
110 |
ccttctttagcagtaataaaatttttatcggatcggctttacctttcacataagcaactccagcagatggattaatctggtaactcaagtctagcaaaga |
209 |
Q |
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| T |
10237759 |
ccttctttagcagtaataaaatttttatcggatcggctttacctttcacataagcaactccagcagatggattaatctggtaactcaggtctagcaaaga |
10237858 |
T |
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| Q |
210 |
aaacaaaatatcaaaagacacggtaaaggaatggataaacaataattaaaaggaaatatggaaattttacaatgacattgaataacaataaattatattg |
309 |
Q |
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|||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10237859 |
aaacaaaatatcaaaagaaacggtaaaggaacggataaacaataattaaaaggaaatatggaaattttacaatgacattgaataacaataaattatattg |
10237958 |
T |
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| Q |
310 |
ctataccaccccannnnnnnaaggtagtttgaaatcggaacttggtcaggtattggcgtaaaactattttacact-aaaaaatgtatatccattaaacc |
407 |
Q |
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||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
10237959 |
ctataccaccccatttttataaggtagtttgaaatcggaacttggtcaggtattggcgtaaaactattttacactaaaaaaatgtatatccattaaacc |
10238057 |
T |
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