View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2982_low_7 (Length: 404)
Name: NF2982_low_7
Description: NF2982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2982_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 347; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 17 - 397
Target Start/End: Original strand, 24881377 - 24881750
Alignment:
| Q |
17 |
aaatacatattgatggtaagtgtgaatacgttggtggctaaaacatagaagaattatatatttgttggcaatgcattcatgttgagataataatgtagga |
116 |
Q |
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| T |
24881377 |
aaatacatattgatggtaagtgtgaatacgttggtggctaaaacatagaagaattatatatttgttggcaatgcattcatgttgagataataatgtagga |
24881476 |
T |
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| Q |
117 |
ggtttgcagaggttagctaagtatagtgctttttatactttggggttccatttgtggaatctgagtataaaggcgataaatttctcgtaagtttagtatc |
216 |
Q |
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| T |
24881477 |
ggtttgcagaggttagctaagtatagtgctttttatactttggggttccatttgtggaatctgagtataaaggcgataaatttctcgtaagtttagtatc |
24881576 |
T |
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| Q |
217 |
cttaatctgaacgaaatgaattggatagcataaattccccgtttgggaccaattaaaaattaaaatgcaaaaaggataaactatatcatctccaattctg |
316 |
Q |
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| T |
24881577 |
cttaatctgaacgaaatgaattggatagcataaattccctgtttgggacc-------aattaaaatgcaaaaaggataaactatatcatctccaattctg |
24881669 |
T |
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| Q |
317 |
agtttgaggattttaaaataccccttaattagtgagaaattgagaattctccgttctctttgctcttttgtccctttgctt |
397 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
24881670 |
agtttgaggattttaaaataccccttaattagtgagaaattgagaattctccgttctctttgctcttttgtcccttcgctt |
24881750 |
T |
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