View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2986-Insertion-12 (Length: 487)
Name: NF2986-Insertion-12
Description: NF2986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2986-Insertion-12 |
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Alignment Details
Target: chr5 (Bit Score: 331; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 8 - 469
Target Start/End: Original strand, 14539709 - 14540184
Alignment:
| Q |
8 |
cttatgatatgtgtcttcttaatgaccaaagcatttgaacatgattt----------tttcacctctaatttttaaaaacttcttaacattgaactttgt |
97 |
Q |
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| T |
14539709 |
cttatgatatgtgtcttcttaatgaccaaagcatttgaacataagttgaaaataattttccacctttaatttttaaaaacttcttaacattgaacttcgt |
14539808 |
T |
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| Q |
98 |
taagcacttataaactcaaagacttttttcttaaagaaagacataaactca--gacgttttcatttatcaaataaaa--atttcattgtgtaactaaaac |
193 |
Q |
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| T |
14539809 |
ta-gcacctataaactcaaagactttttttttaaagaaagacataaactcaaagacgttttcatttatcaaataagagaatttcattgtgtaactaaaac |
14539907 |
T |
|
| Q |
194 |
caaatctatattacgattatggttttgtaacaattccatatcatatatttttaaattaatttgatgcaaattgaaacagacaaacaacatagaatcgtat |
293 |
Q |
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| T |
14539908 |
caaatctatattacgattatggttttgtaacaattgcatatcatatattgttaaattaatttgatgcaaattgaaacagacaaacaacatagaatcgtat |
14540007 |
T |
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| Q |
294 |
gtaatagttctgcttgttgtttaattagtgaatatattaatcaagttgtgagttgattctgatcgtcagcagcatcatatcgaccacaacattagaagga |
393 |
Q |
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| T |
14540008 |
gtaatagttctgcttgttgtttaattagtgaatatattaatcaagttgtgagttgattctgatcgttagcagcatcatatcgaccacaacattagaagga |
14540107 |
T |
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| Q |
394 |
atatataacatatgggtacattcnnnnnnnggtaagaaaaatttattaacaagagtataa-ggggtaccaccaaacc |
469 |
Q |
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||||||||||||||||||||||| | |||||||| ||||||||||||||||||| |||||||||||||||| |
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| T |
14540108 |
atatataacatatgggtacattctttttttgataagaaaattttattaacaagagtataagggggtaccaccaaacc |
14540184 |
T |
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