View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2986-Insertion-9 (Length: 668)

Name: NF2986-Insertion-9
Description: NF2986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2986-Insertion-9
NF2986-Insertion-9
[»] chr8 (1 HSPs)
chr8 (8-668)||(12289839-12290504)


Alignment Details
Target: chr8 (Bit Score: 572; Significance: 0; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 572; E-Value: 0
Query Start/End: Original strand, 8 - 668
Target Start/End: Original strand, 12289839 - 12290504
Alignment:
Q  8 cgtttttccactatcagagtcctacccttcccatctatttgaaaaggtggaaggaccgagcgccgacaaggtgaggtaaacagcttaatcacattgtgtc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  12289839 cgtttttccactatcagagtcctacccttcccatctatttgaaaaggtggaaggaccgagccccgacaaggtgaggtaaacagctgaatcacattgtgtc 12289938  T
Q  108 gatctccactcagtggaatggacgtcacattctgacactcggttttatctcaagaaccatggaaacaacaatgatgggaaaagacagaatcaattggaat 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12289939 gatctccactcagtggaatggacgtcacattctgacactcggttttatctcaagaaccatggaaacaacaatgatgggaaaagacagaatcaattggaat 12290038  T
Q  208 tgaggttgattaagagatcactatcaagaagaatcgttagcctccttttaggccgcaccaccccatgactgctgcgaagacatttgattagagtaacata 307  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  12290039 tgaggttgattaagagatcactatcaagaagaatcattagcctccttttaggccgcaccgccccatgactgctgcgaagacattttattagagtaacata 12290138  T
Q  308 acaagaaaacaagttgcacataaaaatcacct-------ttgcatcataaatatcactgtttttcaaac--agtctttcacataactttcagagttttat 398  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  12290139 acaagaaaacaagttgcacataaaaatcacctatgcacgttgcatcataaatatcactgtttttcaaacatagtctttcacataactttcagagttttat 12290238  T
Q  399 acacaatcgatgattgtacgccaatccacaagttaaatccattacaaccaaacatcagaggcaaatataaagaatataatatcgttgcttttggtaaaac 498  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||        
T  12290239 acacaatcgatgattgtacgccaatccacaagttaaatccattacaaccaaacatcagaggcaaatataaagaatatattatcgttgtttttggta---- 12290334  T
Q  499 aagaaaaacgaataaaggatttgtagaaaagtggtgccaactaaattgaaaatcaatctaggtttcattttaaggaataaacgaacttgaactatataga 598  Q
    || | ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12290335 aatataaatgaataaaggattcgtagaaaagtggtgccaactaaattgaaaatcaatctaggtttcattttaaggaataaacgaacttgaactatataga 12290434  T
Q  599 aacataattacataattgttagaagtcgctatctttcagaacctaaacataaataatcataaactactac 668  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12290435 aacataattacataattgttagaagtcgctatctttcagaacctaaacataaataatcataaactactac 12290504  T

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