View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2986R-Insertion-6 (Length: 323)
Name: NF2986R-Insertion-6
Description: NF2986R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2986R-Insertion-6 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 9 - 323
Target Start/End: Complemental strand, 20234206 - 20233893
Alignment:
| Q |
9 |
tataagaccacaacatcaatcataatttctttccatctgtactagacttgtgcttctactaaccaatattcttatgccaattgtcatcatgcaattggtt |
108 |
Q |
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| T |
20234206 |
tataagaccacaacatcaatcataatttctttccatctgtactagacttgtgcttctactaaccaatattcttatgccaattgtcaccatgcaattggtt |
20234107 |
T |
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| Q |
109 |
caattaattttagccctatcacaagttcacaaccttttgctcaacaatgtcttctaaggcatgatgatgttctttttacagcaaaggatcgttttgggtt |
208 |
Q |
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| T |
20234106 |
caattaattttagccctatcacaagttcacaaccttttgctcaacaatgtcttttaaggcatgatgatgttctttttacagcaaaggatcgttttgggtt |
20234007 |
T |
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| Q |
209 |
ttactaaaggattnnnnnnnnncaatgtagcttcttttaggtatcctctcatgtaacttgtgatgacaacaatgatggattgtcatttttgttacttcaa |
308 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20234006 |
ttactaaaggatt-aaaaaaaacaatgtagcttcttttaggtatcctctcatgtaacttgtgatgacaacaatgatggattgtcatttttgttacttcaa |
20233908 |
T |
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| Q |
309 |
gcaaaagtgtctttg |
323 |
Q |
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||||||||||||||| |
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| T |
20233907 |
gcaaaagtgtctttg |
20233893 |
T |
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