View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2986_high_9 (Length: 279)
Name: NF2986_high_9
Description: NF2986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2986_high_9 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 19 - 279
Target Start/End: Complemental strand, 48889160 - 48888900
Alignment:
| Q |
19 |
agatgtagtttaaacgcaatcagaaatatttgaatttttgtaaatataattcagcaatcagagtgacattagaggtgtagtttcacttttatgtttgata |
118 |
Q |
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| T |
48889160 |
agatgtagtttaaacgcaatcagaaatatttgaatttttgtaaaaataattcagcaatcagagtgacattagaggtgtagtttcacttttatgtttgata |
48889061 |
T |
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| Q |
119 |
tgggcattgatgacagaacagctgaacataaaatgtatctattggttattttttaagcttgacaattgaagagcccatatgatgataatgattagttatg |
218 |
Q |
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| T |
48889060 |
tgggcatcgatgacagaacagctgaatataaaatgtatctattggttattttttaagcttgacaattgaagagcccatatgatgataatgattagttatg |
48888961 |
T |
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| Q |
219 |
acacatatatatcagttaccttgttgtcaaatccagaggtaacaacttcttcttcagcagc |
279 |
Q |
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| T |
48888960 |
acacatatatatcagttaccttgttgtcaaatccagaagtaacaacttcttcttcagcagc |
48888900 |
T |
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