View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2989_low_2 (Length: 279)
Name: NF2989_low_2
Description: NF2989
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2989_low_2 |
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Alignment Details
Target: chr8 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 16 - 264
Target Start/End: Original strand, 29967390 - 29967632
Alignment:
| Q |
16 |
atgcttaaacgaaacgtgtggtgtcgtctgagtatcaaagattctgaaatgaaatgaaatgaaatgaaattattagttccaattaaacaacacaagttag |
115 |
Q |
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| T |
29967390 |
atgcttaaacgaaacgtgtggtgtcgtctgagtatcaaagattctgaa----------atgaaatgaaattattagttccaattaaacaacacaagttag |
29967479 |
T |
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| Q |
116 |
ttaccgttactttatg----ataacttacggaagagggtaaccagaggttaaattagtttctgagaagagaatagagtgaaagtgtataggctggtgagt |
211 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29967480 |
ttaccgttactttatgatatataacttacggaagagggtaaccagaggttaaattagtttctgagaagagaatagagtgaaagtgtataggctggtgagt |
29967579 |
T |
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| Q |
212 |
ctgaagaaaatgagcccagagttcgttatcggagacgagagatcgccatgact |
264 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29967580 |
ctgaagaaaatgagcccagagttcgttatcggagacgagagatcgccatgact |
29967632 |
T |
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