View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2990_low_11 (Length: 246)

Name: NF2990_low_11
Description: NF2990
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2990_low_11
NF2990_low_11
[»] chr6 (56 HSPs)
chr6 (22-235)||(29826005-29826218)
chr6 (23-162)||(28325460-28325599)
chr6 (22-226)||(26937072-26937276)
chr6 (22-162)||(28234542-28234682)
chr6 (23-215)||(27718395-27718587)
chr6 (22-162)||(28242782-28242922)
chr6 (22-162)||(28297782-28297922)
chr6 (22-162)||(28514151-28514291)
chr6 (26-162)||(25481724-25481860)
chr6 (23-215)||(27611018-27611210)
chr6 (22-162)||(27665186-27665326)
chr6 (23-215)||(27724861-27725053)
chr6 (23-162)||(25579698-25579837)
chr6 (23-162)||(28181093-28181232)
chr6 (23-162)||(28185345-28185484)
chr6 (26-162)||(26142847-26142983)
chr6 (22-162)||(26342003-26342143)
chr6 (23-147)||(27229211-27229335)
chr6 (17-161)||(27593090-27593234)
chr6 (30-162)||(28226936-28227068)
chr6 (23-162)||(27338134-27338273)
chr6 (23-162)||(27398874-27399013)
chr6 (22-139)||(26893563-26893680)
chr6 (22-162)||(26959143-26959284)
chr6 (23-99)||(26802421-26802497)
chr6 (23-215)||(27698510-27698702)
chr6 (22-162)||(28149916-28150055)
chr6 (23-102)||(28781118-28781197)
chr6 (23-102)||(28786257-28786336)
chr6 (23-102)||(28792378-28792457)
chr6 (23-69)||(26811488-26811534)
chr6 (17-162)||(26635663-26635808)
chr6 (17-162)||(26741629-26741774)
chr6 (17-162)||(27678919-27679064)
chr6 (26-162)||(26048827-26048963)
chr6 (26-162)||(26055908-26056044)
chr6 (26-162)||(26069996-26070132)
chr6 (26-162)||(26075878-26076014)
chr6 (26-162)||(26655971-26656107)
chr6 (26-162)||(26761942-26762078)
chr6 (25-69)||(26975033-26975077)
chr6 (23-67)||(27214396-27214440)
chr6 (23-67)||(27234788-27234832)
chr6 (23-75)||(27531353-27531405)
chr6 (22-69)||(25071637-25071684)
chr6 (23-162)||(27604774-27604913)
chr6 (23-69)||(26617305-26617351)
chr6 (23-69)||(26723233-26723279)
chr6 (44-102)||(27677743-27677801)
chr6 (41-162)||(28139538-28139659)
chr6 (22-75)||(31284266-31284319)
chr6 (26-162)||(25538522-25538658)
chr6 (22-162)||(26622954-26623094)
chr6 (22-162)||(26728932-26729072)
chr6 (22-162)||(26884141-26884281)
chr6 (23-75)||(26949640-26949692)
[»] scaffold0038 (4 HSPs)
scaffold0038 (23-162)||(116775-116914)
scaffold0038 (22-162)||(34703-34843)
scaffold0038 (22-162)||(42944-43084)
scaffold0038 (30-162)||(27434-27566)
[»] chr4 (4 HSPs)
chr4 (22-168)||(5091017-5091163)
chr4 (22-218)||(18679567-18679763)
chr4 (22-162)||(18655533-18655673)
chr4 (22-162)||(18731560-18731700)
[»] scaffold0019 (1 HSPs)
scaffold0019 (23-150)||(58363-58490)
[»] scaffold0349 (2 HSPs)
scaffold0349 (23-215)||(14372-14563)
scaffold0349 (23-102)||(3551-3630)
[»] chr8 (1 HSPs)
chr8 (22-162)||(31903829-31903969)
[»] scaffold1254 (1 HSPs)
scaffold1254 (23-102)||(46-125)
[»] scaffold0419 (1 HSPs)
scaffold0419 (23-102)||(7504-7583)
[»] scaffold0277 (2 HSPs)
scaffold0277 (23-102)||(13761-13840)
scaffold0277 (23-69)||(4833-4879)
[»] chr2 (1 HSPs)
chr2 (23-69)||(17993846-17993892)
[»] chr5 (1 HSPs)
chr5 (25-102)||(16688992-16689069)
[»] chr1 (1 HSPs)
chr1 (60-165)||(28127732-28127837)


Alignment Details
Target: chr6 (Bit Score: 202; Significance: 1e-110; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 22 - 235
Target Start/End: Original strand, 29826005 - 29826218
Alignment:
Q  22 caccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctct 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29826005 caccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcaattcaagaatctaggatagccattcctattttctct 29826104  T
Q  122 accaattatgcttcttcttcgttttgcttagatgaacttgtgcatatagttgagtgtgtcaagaggaagggtcgtctcgttttgcctattttctatgatg 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29826105 accaattatgcttcttcttcgttttgcttagatgaacttgtgcatatagttgagtgtgtcaagaggaagggtcgtctcgttttgcctattttctatgatg 29826204  T
Q  222 tggattcatctcat 235  Q
    ||||| | ||||||    
T  29826205 tggatccttctcat 29826218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 23 - 162
Target Start/End: Original strand, 28325460 - 28325599
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctcta 122  Q
    |||||||||||||||||||| |||||| |||| |||||||| ||||| |||||| | ||||| ||| |||| ||||||||   |||||||||||| ||||    
T  28325460 accttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggattttcattcctattttgtcta 28325559  T
Q  123 ccaattatgcttcttcttcgttttgcttagatgaacttgt 162  Q
     |||||||||||||||||| |||||||| |||||||||||    
T  28325560 tcaattatgcttcttcttccttttgcttggatgaacttgt 28325599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 226
Target Start/End: Original strand, 26937072 - 26937276
Alignment:
Q  22 caccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctct 121  Q
    |||||||||||||||||| ||||| ||  |||| || ||||||||||| |||||||| ||||| ||| |||| ||  |||| ||||| ||| | ||||||    
T  26937072 caccttcattgatgacaaggagctccatggaggagaagaaatcacaccatcacttgtcaaggcaattgaagattccgggattgccatacctgtattctct 26937171  T
Q  122 accaattatgcttcttcttcgttttgcttagatgaacttgtgcatatagttgagtgtgtcaagaggaagggtcgtctcgttttgcctattttctatgatg 221  Q
    | ||| |||||  ||||||| ||||| || || |||||||| || || ||||| ||  ||||||  || |||| |||  ||||||||||||||||||| |    
T  26937172 atcaactatgccacttcttcattttgtttggacgaacttgtccacatcgttgactgcttcaagacaaaaggtcatctaattttgcctattttctatgaag 26937271  T
Q  222 tggat 226  Q
    |||||    
T  26937272 tggat 26937276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 28234542 - 28234682
Alignment:
Q  22 caccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctct 121  Q
    |||||||||||||||||  ||||||||| |||| || ||||| ||||| |||||| | ||||| ||| |||| ||||||||   ||||||| | || |||    
T  28234542 caccttcattgatgacagggagcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtct 28234641  T
Q  122 accaattatgcttcttcttcgttttgcttagatgaacttgt 162  Q
    | |||||||||||||||||| |||||||| || ||||||||    
T  28234642 atcaattatgcttcttcttcattttgcttggacgaacttgt 28234682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 215
Target Start/End: Complemental strand, 27718587 - 27718395
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctcta 122  Q
    ||||||||||||||||| || ||||||||||| || ||||||||||| |||||  | ||||| ||| | |||||||||||    |||||| | || ||||    
T  27718587 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttcta 27718488  T
Q  123 ccaattatgcttcttcttcgttttgcttagatgaacttgtgcatatagttgagtgtgtcaagaggaagggtcgtctcgttttgcctattttct 215  Q
     ||| ||||| |||||||||||||| || || |||||||| || ||| || | ||   |||||  |||||||| |||||||||||| ||||||    
T  27718487 tcaactatgcctcttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttct 27718395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 28242782 - 28242922
Alignment:
Q  22 caccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctct 121  Q
    ||||||||||||||||| ||| |||| | |||| ||| |||| ||||| |||||| | ||||| ||| |||| ||||||||   ||||||| | || |||    
T  28242782 caccttcattgatgacagagaacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtct 28242881  T
Q  122 accaattatgcttcttcttcgttttgcttagatgaacttgt 162  Q
    | |||||||||||||||||| |||||||| || ||||||||    
T  28242882 atcaattatgcttcttcttcattttgcttggacgaacttgt 28242922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 28297922 - 28297782
Alignment:
Q  22 caccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctct 121  Q
    ||||||||||||||||| ||||||| || |||| |||||||| ||||| |||||| | |||   ||| ||||  |||||||   ||||||| | || |||    
T  28297922 caccttcattgatgacagagagcttaaaggaggtgacgaaataacaccatcacttttcaagcacattgaagagactaggattttcattcctgtcttatct 28297823  T
Q  122 accaattatgcttcttcttcgttttgcttagatgaacttgt 162  Q
    |||||||||||||||||||| |||||||| || ||||||||    
T  28297822 accaattatgcttcttcttcattttgcttggacgaacttgt 28297782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 28514151 - 28514291
Alignment:
Q  22 caccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctct 121  Q
    ||||||||||||||||| ||||||| || |||| |||||||| ||||| |||||| | |||   ||| ||||  |||||||   ||||||| | || |||    
T  28514151 caccttcattgatgacagagagcttaaaggaggtgacgaaataacaccatcacttttcaagcacattgaagagactaggattttcattcctgtcttatct 28514250  T
Q  122 accaattatgcttcttcttcgttttgcttagatgaacttgt 162  Q
    |||||||||||||||||||| |||||||| || ||||||||    
T  28514251 accaattatgcttcttcttcattttgcttggacgaacttgt 28514291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 162
Target Start/End: Original strand, 25481724 - 25481860
Alignment:
Q  26 ttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctctacca 125  Q
    ||||||||||| || || ||||||||||| || ||||||||||| |||||||| ||||| ||| |||||||||||||    ||||| || || ||| |||    
T  25481724 ttcattgatgaaaatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttgtattcccatattttctgcca 25481823  T
Q  126 attatgcttcttcttcgttttgcttagatgaacttgt 162  Q
    | ||||| |||||||| ||||| || || ||||||||    
T  25481824 actatgcatcttcttcattttgtttggacgaacttgt 25481860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 215
Target Start/End: Complemental strand, 27611210 - 27611018
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctcta 122  Q
    ||||||||||||||||| || |||| |||||| || ||||||||||| |||||  | ||||| ||| | |||||||||||    |||||| | || ||||    
T  27611210 accttcattgatgacaatgatcttccaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttcta 27611111  T
Q  123 ccaattatgcttcttcttcgttttgcttagatgaacttgtgcatatagttgagtgtgtcaagaggaagggtcgtctcgttttgcctattttct 215  Q
     ||| ||||| |||||||||||||| || || |||||||| || ||| || | ||   |||||  |||||||| |||||||||||| ||||||    
T  27611110 tcaactatgcctcttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttct 27611018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 27665326 - 27665186
Alignment:
Q  22 caccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctct 121  Q
    |||||||||||||||||| ||||||| ||  || |||||||||||||| |||||   ||||   ||| ||||||| ||||| ||||||  ||| ||||||    
T  27665326 caccttcattgatgacaaggagcttccaactggtgacgaaatcacaccttcactccggaagagcattgaagaatcgaggattgccattattatattctct 27665227  T
Q  122 accaattatgcttcttcttcgttttgcttagatgaacttgt 162  Q
    |  || |||||| ||||||| ||||| ||||||||||||||    
T  27665226 aagaactatgctacttcttcattttgtttagatgaacttgt 27665186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 215
Target Start/End: Complemental strand, 27725053 - 27724861
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctcta 122  Q
    ||||||||||||||||| || ||||||||||| || ||||||||||| |||||  | ||||| ||| | |||||||||||    |||||| | || ||||    
T  27725053 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttcta 27724954  T
Q  123 ccaattatgcttcttcttcgttttgcttagatgaacttgtgcatatagttgagtgtgtcaagaggaagggtcgtctcgttttgcctattttct 215  Q
     ||| ||||| | |||||||||||| || || |||||||| || ||| || | ||   |||||  |||||||| |||||||||||| ||||||    
T  27724953 tcaactatgcctattcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttct 27724861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 162
Target Start/End: Original strand, 25579698 - 25579837
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctcta 122  Q
    |||||| ||||||| || || ||||||||||| || ||||||||||| |||||||| ||||| ||| |||||||||||||    ||||| || || |||     
T  25579698 accttctttgatgataatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttctg 25579797  T
Q  123 ccaattatgcttcttcttcgttttgcttagatgaacttgt 162  Q
    |||| ||||| |||||||| ||||| || || ||||||||    
T  25579798 ccaactatgcatcttcttcattttgtttggacgaacttgt 25579837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 162
Target Start/End: Original strand, 28181093 - 28181232
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctcta 122  Q
    |||||||| ||||||| |||||||||| |||| || ||||| ||| | |||||| | ||||| ||| |||| ||||||||   ||||||  | || ||||    
T  28181093 accttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtcta 28181192  T
Q  123 ccaattatgcttcttcttcgttttgcttagatgaacttgt 162  Q
     |||||||||||||||||| |||||||| || ||||||||    
T  28181193 tcaattatgcttcttcttcattttgcttggacgaacttgt 28181232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 162
Target Start/End: Original strand, 28185345 - 28185484
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctcta 122  Q
    |||||||| ||||||| |||||||||| |||| || ||||| ||| | |||||| | ||||| ||| |||| ||||||||   ||||||  | || ||||    
T  28185345 accttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtcta 28185444  T
Q  123 ccaattatgcttcttcttcgttttgcttagatgaacttgt 162  Q
     |||||||||||||||||| |||||||| || ||||||||    
T  28185445 tcaattatgcttcttcttcattttgcttggacgaacttgt 28185484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 162
Target Start/End: Original strand, 26142847 - 26142983
Alignment:
Q  26 ttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctctacca 125  Q
    ||||||||||| || || ||| ||||||| || ||||||||||| |||||||| ||||| ||| |||||||||||||    ||||| || || ||| |||    
T  26142847 ttcattgatgataatgatcttgaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgcca 26142946  T
Q  126 attatgcttcttcttcgttttgcttagatgaacttgt 162  Q
    | ||||| |||||||| ||||| || || ||||||||    
T  26142947 actatgcatcttcttcattttgtttggacgaacttgt 26142983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 26342143 - 26342003
Alignment:
Q  22 caccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctct 121  Q
    ||||||||||||||| |  ||||||||  |||| ||| |||||||||  |||||||| || || ||| |||| || |||||   |||||| ||||||||     
T  26342143 caccttcattgatgatagggagcttcatggaggtgacaaaatcacacaatcacttgtcaaagccattgaagagtccaggattttcattccaattttctca 26342044  T
Q  122 accaattatgcttcttcttcgttttgcttagatgaacttgt 162  Q
    | ||| |||||||||||||||||||| || || ||||||||    
T  26342043 atcaactatgcttcttcttcgttttgtttggacgaacttgt 26342003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 147
Target Start/End: Original strand, 27229211 - 27229335
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctcta 122  Q
    ||||||||||||||||| || ||||||||||| |||||||||||||| ||||| || ||||| ||| | |||||| ||||    ||||| || || |||     
T  27229211 accttcattgatgacaatgatcttcaaagaggagacgaaatcacaccatcactcgtcaaggccattgacgaatctcggatttttattcccatattttctg 27229310  T
Q  123 ccaattatgcttcttcttcgttttg 147  Q
    |||| ||||| |||||||| |||||    
T  27229311 ccaactatgcatcttcttcattttg 27229335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 27593234 - 27593090
Alignment:
Q  17 atcatcaccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattt 116  Q
    |||| |||||||||||||||||| |  |||||||||||  | ||||||||||| |||||| | ||||| ||| |||| ||||||||    |||||| | |    
T  27593234 atcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgt 27593135  T
Q  117 tctctaccaattatgcttcttcttcgttttgcttagatgaacttg 161  Q
    | |||| ||| ||||| |||||||||||||| || || |||||||    
T  27593134 tttctatcaactatgcctcttcttcgttttgtttggacgaacttg 27593090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 162
Target Start/End: Original strand, 28226936 - 28227068
Alignment:
Q  30 ttgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctctaccaatta 129  Q
    ||||||| | |||||||||| |||| || ||||| ||| | |||||| | ||||  ||| |||||||||||||   ||||||| | || |||| ||||||    
T  28226936 ttgatgatagagagcttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcattcctgtcttgtctatcaatta 28227035  T
Q  130 tgcttcttcttcgttttgcttagatgaacttgt 162  Q
    |||||||||||| |||||||| || ||||||||    
T  28227036 tgcttcttcttcattttgcttggacgaacttgt 28227068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 162
Target Start/End: Complemental strand, 27338273 - 27338134
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctcta 122  Q
    ||||||||||||||||| || ||| ||||||| || |||| |||||| |||||||| ||||| ||| |||| ||||||||    ||||| || || |||     
T  27338273 accttcattgatgacaacgatcttgaaagaggagatgaaagcacaccatcacttgtcaaggccattgaagagtctaggattttgattcccatattttctg 27338174  T
Q  123 ccaattatgcttcttcttcgttttgcttagatgaacttgt 162  Q
    | || ||||| |||||||| |||||||| || ||||||||    
T  27338173 caaactatgcatcttcttcattttgcttggacgaacttgt 27338134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 162
Target Start/End: Complemental strand, 27399013 - 27398874
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctcta 122  Q
    ||||||||||||||||| || ||| ||||||| || |||| |||||| |||||||| ||||| ||| |||| ||||||||    ||||| || || |||     
T  27399013 accttcattgatgacaacgatcttgaaagaggagatgaaagcacaccatcacttgtcaaggccattgaagagtctaggattttgattcccatattttctg 27398914  T
Q  123 ccaattatgcttcttcttcgttttgcttagatgaacttgt 162  Q
    | || ||||| |||||||| |||||||| || ||||||||    
T  27398913 caaactatgcatcttcttcattttgcttggacgaacttgt 27398874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 139
Target Start/End: Complemental strand, 26893680 - 26893563
Alignment:
Q  22 caccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctct 121  Q
    ||||||||||||||| | ||||||||| ||||| ||||||||| |||| |||||| | ||||| ||| |||| |||| ||||  ||||||  |  |||||    
T  26893680 caccttcattgatgatacagagcttcatagaggtgacgaaatctcaccatcacttatcaaggcaattgaagagtctatgatatacattccagtcctctct 26893581  T
Q  122 accaattatgcttcttct 139  Q
    | ||| ||||||||||||    
T  26893580 atcaactatgcttcttct 26893563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 26959143 - 26959284
Alignment:
Q  22 caccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcg-attcaagaatctaggatagccattcctattttctc 120  Q
    ||||||||||||||||||||||||| ||| |||||| ||||||||||| || ||| | || | | ||| |||| || ||||| ||||||    |||||||    
T  26959143 caccttcattgatgacaaagagcttaaaaaaggggatgaaatcacaccttcgcttctcaaagagcattgaagactcgaggattgccattatcgttttctc 26959242  T
Q  121 taccaattatgcttcttcttcgttttgcttagatgaacttgt 162  Q
    ||   | |||||||||||||||||||  || |||||||||||    
T  26959243 taaggaatatgcttcttcttcgttttatttggatgaacttgt 26959284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 26802421 - 26802497
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctag 99  Q
    ||||||||||||||||| || ||||||||||| || ||||||||||| |||||  | ||||| ||| ||||||||||    
T  26802421 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctag 26802497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 215
Target Start/End: Complemental strand, 27698702 - 27698510
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctcta 122  Q
    ||||||||||||||||| || ||||||||||| || ||||||||||| |||||  | ||||| ||| | |||||||||||    |||||| | || |||     
T  27698702 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctc 27698603  T
Q  123 ccaattatgcttcttcttcgttttgcttagatgaacttgtgcatatagttgagtgtgtcaagaggaagggtcgtctcgttttgcctattttct 215  Q
     ||| ||||| |||||||| ||||| || || |||||||| || ||| || | ||   | |||  |||||||| |||||||||||| ||||||    
T  27698602 tcaactatgcatcttcttcattttgtttggacgaacttgtccacataattcactgctacgagacaaagggtcgcctcgttttgcctgttttct 27698510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 28149916 - 28150055
Alignment:
Q  22 caccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctct 121  Q
    ||||||||||||||| |  |||||| || ||||||||||||||||||| |||| | | ||||| ||| |||| || |||||   |||||| || ||||||    
T  28149916 caccttcattgatgatacggagctttaacgaggggacgaaatcacaccatcac-tctcaaggccattgaagagtccaggattttcattccaatcttctct 28150014  T
Q  122 accaattatgcttcttcttcgttttgcttagatgaacttgt 162  Q
    | ||| ||| |||||||||| ||||| || || ||||||||    
T  28150015 atcaactatacttcttcttcattttgtttggacgaacttgt 28150055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 28781118 - 28781197
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggat 102  Q
    ||||||||||||||||| || ||||||||||| || ||||||||||| |||||  | ||||| ||  |||||||||||||    
T  28781118 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggat 28781197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 28786257 - 28786336
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggat 102  Q
    ||||||||||||||||| || ||||||||||| || ||||||||||| |||||  | ||||| ||  |||||||||||||    
T  28786257 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggat 28786336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 28792378 - 28792457
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggat 102  Q
    ||||||||||||||||| || ||||||||||| || ||||||||||| |||||  | ||||| ||  |||||||||||||    
T  28792378 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggat 28792457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 26811488 - 26811534
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcacacc 69  Q
    ||||||||||||||||| |||||||| ||||| ||||||||||||||    
T  26811488 accttcattgatgacaaggagcttcagagaggtgacgaaatcacacc 26811534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 26635663 - 26635808
Alignment:
Q  17 atcatcaccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattt 116  Q
    |||| |||||||||||||||||| |||||| ||| |||||| ||||||||||| || ||  | |||   ||| |||| || ||||| ||||||    |||    
T  26635663 atcaacaccttcattgatgacaaggagcttaaaaaaggggatgaaatcacaccttcgctcctcaagagcattgaagagtcgaggattgccattatcgttt 26635762  T
Q  117 tctctaccaattatgcttcttcttcgttttgcttagatgaacttgt 162  Q
    ||||||   | ||||||||||||| |||||| || |||||||||||    
T  26635763 tctctaaggaatatgcttcttctttgttttgtttggatgaacttgt 26635808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 26741629 - 26741774
Alignment:
Q  17 atcatcaccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattt 116  Q
    |||| |||||||||||||||||| |||||| ||| |||||| ||||||||||| || ||  | |||   ||| |||| || ||||| ||||||    |||    
T  26741629 atcaacaccttcattgatgacaaggagcttaaaaaaggggatgaaatcacaccttcgctcctcaagagcattgaagagtcgaggattgccattatcgttt 26741728  T
Q  117 tctctaccaattatgcttcttcttcgttttgcttagatgaacttgt 162  Q
    ||||||   | ||||||||||||| |||||| || |||||||||||    
T  26741729 tctctaaggaatatgcttcttctttgttttgtttggatgaacttgt 26741774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 27678919 - 27679064
Alignment:
Q  17 atcatcaccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattt 116  Q
    |||| ||||||||||||| | || |  ||||||||||| || ||||||||||| |||||| | ||||| ||| |||| ||||||||    |||||| | |    
T  27678919 atcaacaccttcattgataagaatggtcttcaaagaggagatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgt 27679018  T
Q  117 tctctaccaattatgcttcttcttcgttttgcttagatgaacttgt 162  Q
    | |||| ||| ||||| |||||||| ||||| || || ||||||||    
T  27679019 tttctatcaactatgcctcttcttcattttgtttggacgaacttgt 27679064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 162
Target Start/End: Original strand, 26048827 - 26048963
Alignment:
Q  26 ttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctctacca 125  Q
    ||||||||||| || || ||| ||||||| || ||||||||||||  |||||| ||||| ||  |||||||||||||    ||||| || || ||| |||    
T  26048827 ttcattgatgataatgatcttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatctaggatttttattcccatattttctgcca 26048926  T
Q  126 attatgcttcttcttcgttttgcttagatgaacttgt 162  Q
    | ||||| |||||||| ||||| || || ||||||||    
T  26048927 actatgcatcttcttcattttgtttggacgaacttgt 26048963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 162
Target Start/End: Original strand, 26055908 - 26056044
Alignment:
Q  26 ttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctctacca 125  Q
    ||||||||||| || || ||||||||||| || ||||||||| | |||||||| ||||| ||  |||||||| ||||    ||||| || || ||| |||    
T  26055908 ttcattgatgaaaatgatcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgcca 26056007  T
Q  126 attatgcttcttcttcgttttgcttagatgaacttgt 162  Q
    | ||||| |||||||| ||||| || || ||||||||    
T  26056008 actatgcatcttcttcattttgtttggacgaacttgt 26056044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 162
Target Start/End: Original strand, 26069996 - 26070132
Alignment:
Q  26 ttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctctacca 125  Q
    ||||||||||| || || ||| ||||||| || ||||||||||||  |||||| ||||| ||  |||||||||||||    ||||| || || ||| |||    
T  26069996 ttcattgatgataatgatcttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatctaggatttttattcccatattttctgcca 26070095  T
Q  126 attatgcttcttcttcgttttgcttagatgaacttgt 162  Q
    | ||||| |||||||| ||||| || || ||||||||    
T  26070096 actatgcatcttcttcattttgtttggacgaacttgt 26070132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 162
Target Start/End: Original strand, 26075878 - 26076014
Alignment:
Q  26 ttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctctacca 125  Q
    ||||||||||| || || ||||||||||| || ||||||||| | |||||||| ||||| ||  |||||||| ||||    ||||| || || ||| |||    
T  26075878 ttcattgatgaaaatgatcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgcca 26075977  T
Q  126 attatgcttcttcttcgttttgcttagatgaacttgt 162  Q
    | ||||| |||||||| ||||| || || ||||||||    
T  26075978 actatgcatcttcttcattttgtttggacgaacttgt 26076014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 162
Target Start/End: Original strand, 26655971 - 26656107
Alignment:
Q  26 ttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctctacca 125  Q
    |||||||||||||| || ||||  ||||| || ||||||||||| ||||| || ||||| ||| ||||||| |||||    ||||| || || ||| |||    
T  26655971 ttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatccaggatttttattcccatattttctgcca 26656070  T
Q  126 attatgcttcttcttcgttttgcttagatgaacttgt 162  Q
    | ||||| |||||||| ||||| || || ||||||||    
T  26656071 actatgcatcttcttcattttgtttggacgaacttgt 26656107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 162
Target Start/End: Original strand, 26761942 - 26762078
Alignment:
Q  26 ttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctctacca 125  Q
    |||||||||||||| || ||||  ||||| || ||||||||||| ||||| || ||||| ||| ||||||| |||||    ||||| || || ||| |||    
T  26761942 ttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatccaggatttttattcccatattttctgcca 26762041  T
Q  126 attatgcttcttcttcgttttgcttagatgaacttgt 162  Q
    | ||||| |||||||| ||||| || || ||||||||    
T  26762042 actatgcatcttcttcattttgtttggacgaacttgt 26762078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 26975033 - 26975077
Alignment:
Q  25 cttcattgatgacaaagagcttcaaagaggggacgaaatcacacc 69  Q
    ||||||||||||||| |||||| ||| ||||||||||||||||||    
T  26975033 cttcattgatgacaaggagcttaaaaaaggggacgaaatcacacc 26975077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 27214396 - 27214440
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcaca 67  Q
    ||||||||||||||||| |||||||| ||||| ||||||||||||    
T  27214396 accttcattgatgacaaggagcttcagagaggtgacgaaatcaca 27214440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 27234832 - 27234788
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcaca 67  Q
    ||||||||||||||||| |||||||| ||||| ||||||||||||    
T  27234832 accttcattgatgacaaggagcttcagagaggtgacgaaatcaca 27234788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 27531405 - 27531353
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcact 75  Q
    ||||||||||||||||| || ||||||||||| || ||||||||||| |||||    
T  27531405 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 27531353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 25071637 - 25071684
Alignment:
Q  22 caccttcattgatgacaaagagcttcaaagaggggacgaaatcacacc 69  Q
    |||||| |||||||||||||||||| | ||||| ||||||||||||||    
T  25071637 cacctttattgatgacaaagagcttaagagaggtgacgaaatcacacc 25071684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 162
Target Start/End: Complemental strand, 27604913 - 27604774
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctcta 122  Q
    |||||||||||||| || || |||| |||||| || |||||||||||  ||||| | ||||| ||| | ||||| |||||    |||||| | || ||||    
T  27604913 accttcattgatgaaaatgatcttcgaagaggagatgaaatcacaccagcacttctcaaggccattgatgaatccaggatttttattcctgtgttttcta 27604814  T
Q  123 ccaattatgcttcttcttcgttttgcttagatgaacttgt 162  Q
     ||| ||||| |||||||| ||||| || |||||||||||    
T  27604813 tcaaatatgcctcttcttccttttgtttggatgaacttgt 27604774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 26617305 - 26617351
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcacacc 69  Q
    ||||||||||||||||| |||||||| ||||| || |||||||||||    
T  26617305 accttcattgatgacaaggagcttcagagaggtgatgaaatcacacc 26617351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 26723233 - 26723279
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcacacc 69  Q
    ||||||||||||||||| |||||||| ||||| || |||||||||||    
T  26723233 accttcattgatgacaaggagcttcagagaggtgatgaaatcacacc 26723279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 102
Target Start/End: Complemental strand, 27677801 - 27677743
Alignment:
Q  44 cttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggat 102  Q
    |||||||||||||| ||||||||||| |||||| | ||||| ||| |||| ||||||||    
T  27677801 cttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggat 27677743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 28139538 - 28139659
Alignment:
Q  41 gagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctctaccaattatgcttcttctt 140  Q
    ||||||||| |||| ||||||||  |||| ||||| || || || ||| |||||||||||||   ||| ||| | || || | ||| ||||| |||||||    
T  28139538 gagcttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctt 28139637  T
Q  141 cgttttgcttagatgaacttgt 162  Q
    |||||||||| || ||||||||    
T  28139638 cgttttgcttggacgaacttgt 28139659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 31284266 - 31284319
Alignment:
Q  22 caccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcact 75  Q
    ||||||||||||||| |  || |||||||||||||| ||||||||||| |||||    
T  31284266 caccttcattgatgatagtgaacttcaaagaggggatgaaatcacaccatcact 31284319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 162
Target Start/End: Original strand, 25538522 - 25538658
Alignment:
Q  26 ttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctctacca 125  Q
    ||||| ||||| || || ||| ||||||| || ||||||||||| |||||||| ||||| ||  |||||||||| ||    ||||| || || ||| |||    
T  25538522 ttcatagatgataatgatcttgaaagaggagatgaaatcacaccatcacttgtcaaggccatcgaagaatctagaatttttattcccatattttctgcca 25538621  T
Q  126 attatgcttcttcttcgttttgcttagatgaacttgt 162  Q
    | ||||| |||||||| ||||| || || ||||||||    
T  25538622 actatgcatcttcttcattttgtttggacgaacttgt 25538658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 26622954 - 26623094
Alignment:
Q  22 caccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctct 121  Q
    |||||||||||||||    || |||||||||||||||||||||| ||| |||||||  || || ||  |||| ||||||||    |||||| | || |||    
T  26622954 caccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatcacttgacaatgctatcgaagagtctaggatttttattcctgtgttttct 26623053  T
Q  122 accaattatgcttcttcttcgttttgcttagatgaacttgt 162  Q
     |||| ||||| | |||||| ||||| || |||||||||||    
T  26623054 cccaactatgcatattcttcattttgtttggatgaacttgt 26623094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 26728932 - 26729072
Alignment:
Q  22 caccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctct 121  Q
    |||||||||||||||    || |||||||||||||||||||||| ||| |||||||  || || ||  |||| ||||||||    |||||| | || |||    
T  26728932 caccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatcacttgacaatgctatcgaagagtctaggatttttattcctgtgttttct 26729031  T
Q  122 accaattatgcttcttcttcgttttgcttagatgaacttgt 162  Q
     |||| ||||| | |||||| ||||| || |||||||||||    
T  26729032 cccaactatgcatattcttcattttgtttggatgaacttgt 26729072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 26884141 - 26884281
Alignment:
Q  22 caccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctct 121  Q
    ||||||||||||||| ||  | |||| ||||||   |||||||||||| |||||  | ||||| ||| |||||||||| ||    ||||| || || |||    
T  26884141 caccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattccaatattttct 26884240  T
Q  122 accaattatgcttcttcttcgttttgcttagatgaacttgt 162  Q
    ||||| ||||| |||||||| ||||| || || ||||||||    
T  26884241 accaactatgcatcttcttcattttgtttggacgaacttgt 26884281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 26949640 - 26949692
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcact 75  Q
    |||||||||||||| || |||||||| | ||| |||||||||||||| |||||    
T  26949640 accttcattgatgataaggagcttcagaaaggtgacgaaatcacaccttcact 26949692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 72; Significance: 7e-33; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 23 - 162
Target Start/End: Original strand, 116775 - 116914
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctcta 122  Q
    |||||||||||||||||||| |||||| |||| |||||||| ||||| |||||| | ||||| ||| |||| ||||||||   |||||||||||| ||||    
T  116775 accttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggattttcattcctattttgtcta 116874  T
Q  123 ccaattatgcttcttcttcgttttgcttagatgaacttgt 162  Q
     |||||||||||||||||| |||||||| |||||||||||    
T  116875 tcaattatgcttcttcttccttttgcttggatgaacttgt 116914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 34703 - 34843
Alignment:
Q  22 caccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctct 121  Q
    |||||||||||||||||  ||||||||| |||| || ||||| ||||| |||||| | ||||| ||| |||| ||||||||   ||||||| | || |||    
T  34703 caccttcattgatgacagggagcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtct 34802  T
Q  122 accaattatgcttcttcttcgttttgcttagatgaacttgt 162  Q
    | |||||||||||||||||| |||||||| || ||||||||    
T  34803 atcaattatgcttcttcttcattttgcttggacgaacttgt 34843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 42944 - 43084
Alignment:
Q  22 caccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctct 121  Q
    ||||||||||||||||| ||| |||| | |||| ||| |||| ||||| |||||| | ||||| ||| |||| ||||||||   ||||||| | || |||    
T  42944 caccttcattgatgacagagaacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtct 43043  T
Q  122 accaattatgcttcttcttcgttttgcttagatgaacttgt 162  Q
    | |||||||||||||||||| |||||||| || ||||||||    
T  43044 atcaattatgcttcttcttcattttgcttggacgaacttgt 43084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 162
Target Start/End: Original strand, 27434 - 27566
Alignment:
Q  30 ttgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctctaccaatta 129  Q
    ||||||| | |||||||||| |||| || ||||| ||| | |||||| | ||||  ||| |||||||||||||   ||||||| | || |||| ||||||    
T  27434 ttgatgatagagagcttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcattcctgtcttgtctatcaatta 27533  T
Q  130 tgcttcttcttcgttttgcttagatgaacttgt 162  Q
    |||||||||||| |||||||| || ||||||||    
T  27534 tgcttcttcttcattttgcttggacgaacttgt 27566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 4e-25; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 168
Target Start/End: Complemental strand, 5091163 - 5091017
Alignment:
Q  22 caccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctct 121  Q
    ||||||||||||||||| |||||||||  |||| ||| |||| ||||| |||||| | ||||| ||||||||||||| ||| | ||||    ||||||||    
T  5091163 caccttcattgatgacagagagcttcagcgaggagaccaaataacaccgtcacttctcaaggccattcaagaatctaagattgtcattatcgttttctct 5091064  T
Q  122 accaattatgcttcttcttcgttttgcttagatgaacttgtgcatat 168  Q
    | | | |||||||||||||||||||| |||||||||||||| |||||    
T  5091063 aaccactatgcttcttcttcgttttgtttagatgaacttgtccatat 5091017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 218
Target Start/End: Complemental strand, 18679763 - 18679567
Alignment:
Q  22 caccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctct 121  Q
    ||||||||||||||||   || || ||||||||||| ||||||| ||| ||||| |  || || ||| |||| ||||||||   ||||||| | || |||    
T  18679763 caccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttct 18679664  T
Q  122 accaattatgcttcttcttcgttttgcttagatgaacttgtgcatatagttgagtgtgtcaagaggaagggtcgtctcgttttgcctattttctatg 218  Q
    | ||| ||||| |||||||| ||||| || || |||||||| || ||  || | ||   |||||  ||||||||||| ||||||||| |||||||||    
T  18679663 atcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgtcttgttttgcctgttttctatg 18679567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 18655673 - 18655533
Alignment:
Q  22 caccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctct 121  Q
    ||||||||||||||||   ||||| ||||| ||||| ||||||| ||| ||||| |  || || |||||||| ||||||||    |||||| | || |||    
T  18655673 caccttcattgatgaccgtgagctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttct 18655574  T
Q  122 accaattatgcttcttcttcgttttgcttagatgaacttgt 162  Q
    | ||| ||||| |||||||| ||||| || || ||||||||    
T  18655573 atcaactatgcctcttcttcattttgtttggacgaacttgt 18655533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 18731700 - 18731560
Alignment:
Q  22 caccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctct 121  Q
    ||||||||||||||||   || || ||||||||||| ||||||| ||| ||||| |  || || ||| |||| ||||||||   ||||||| | || |||    
T  18731700 caccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttct 18731601  T
Q  122 accaattatgcttcttcttcgttttgcttagatgaacttgt 162  Q
    | ||| ||||| |||||||| ||||| || || ||||||||    
T  18731600 atcaactatgcctcttcttcattttgtttggacgaacttgt 18731560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 150
Target Start/End: Complemental strand, 58490 - 58363
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctcta 122  Q
    |||||||| ||||||| |||||||||| |||| |||||||| ||||| |||||| | ||||| ||| |||| ||||||||   ||||||  | || ||||    
T  58490 accttcatggatgacagagagcttcaaggaggtgacgaaataacaccatcacttttcaaggccattaaagagtctaggattttcattcccgtcttgtcta 58391  T
Q  123 ccaattatgcttcttcttcgttttgctt 150  Q
     ||| |||||||||||||| ||||||||    
T  58390 tcaactatgcttcttcttcattttgctt 58363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 215
Target Start/End: Complemental strand, 14563 - 14372
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctcta 122  Q
    ||||||||||||||||| || ||||||||||| || ||||||||||| |||||  | ||||| ||| | |||||||||||    |||||| | || ||||    
T  14563 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttcta 14464  T
Q  123 ccaattatgcttcttcttcgttttgcttagatgaacttgtgcatatagttgagtgtgtcaagaggaagggtcgtctcgttttgcctattttct 215  Q
     ||| ||||| | |||||||||||| || || |||||||| || ||| || | ||   |||||  |||||||| |||||||||||| ||||||    
T  14463 tcaactatgcct-ttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttct 14372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 102
Target Start/End: Complemental strand, 3630 - 3551
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggat 102  Q
    ||||||||||||||||| || ||||||||||| || ||||||||||| |||||  | ||||| ||| | |||||||||||    
T  3630 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggat 3551  T

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Target: chr8 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 31903829 - 31903969
Alignment:
Q  22 caccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctct 121  Q
    |||||| ||||| ||  |||| |||||||||||  | ||||||||||| |||||| |  |||| ||| |||| |||||||| ||||||  | |  |||||    
T  31903829 cacctttattgacgatgaagaacttcaaagaggacatgaaatcacaccatcacttttagaggcaattgaagagtctaggattgccattattgtgctctct 31903928  T
Q  122 accaattatgcttcttcttcgttttgcttagatgaacttgt 162  Q
    |  || |||||||||||||| ||||||||| ||||||||||    
T  31903929 aaaaactatgcttcttcttcattttgcttacatgaacttgt 31903969  T

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Target: scaffold1254 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 102
Target Start/End: Complemental strand, 125 - 46
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggat 102  Q
    ||||||||||||||||| || ||||||||||| || ||||||||||| |||||  | ||||| ||  |||||||||||||    
T  125 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggat 46  T

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Target: scaffold0419 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 7504 - 7583
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggat 102  Q
    ||||||||||||||||| || ||||||||||| || ||||||||||| |||||  | ||||| ||  |||||||||||||    
T  7504 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggat 7583  T

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Target: scaffold0277 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 102
Target Start/End: Complemental strand, 13840 - 13761
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggat 102  Q
    ||||||||||||||||| || ||||||||||| || ||||||||||| |||||  | ||||| ||  |||||||||||||    
T  13840 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggat 13761  T

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Target: scaffold0277; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 4879 - 4833
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcacacc 69  Q
    ||||||||||||||||| || ||||||||||| || |||||||||||    
T  4879 accttcattgatgacaatgatcttcaaagaggagatgaaatcacacc 4833  T

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Target: chr2 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 17993892 - 17993846
Alignment:
Q  23 accttcattgatgacaaagagcttcaaagaggggacgaaatcacacc 69  Q
    |||||||| ||||||||||||||||| ||||| || |||||||||||    
T  17993892 accttcatcgatgacaaagagcttcagagaggtgatgaaatcacacc 17993846  T

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Target: chr5 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 16688992 - 16689069
Alignment:
Q  25 cttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcgattcaagaatctaggat 102  Q
    ||||||||||||||| || ||||| ||||| ||| |||||||||| |||||| | ||||| ||| |||| || |||||    
T  16688992 cttcattgatgacaaggaacttcagagaggtgacaaaatcacaccatcacttatcaaggcaattgaagactcaaggat 16689069  T

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Target: chr1 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 165
Target Start/End: Complemental strand, 28127837 - 28127732
Alignment:
Q  60 aaatcacaccctcacttgtgaaggcgattcaagaatctaggatagccattcctattttctctaccaattatgcttcttcttcgttttgcttagatgaact 159  Q
    |||||||||| |||||| | ||||| ||| |||||||||| ||    |||||| | || |||||||| ||||| |||||||| ||||| || || |||||    
T  28127837 aaatcacaccgtcacttttaaaggccattgaagaatctagaatttttattcctgtattttctaccaactatgcctcttcttcattttgtttggacgaact 28127738  T
Q  160 tgtgca 165  Q
    ||||||    
T  28127737 tgtgca 28127732  T

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