View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2992_low_16 (Length: 336)
Name: NF2992_low_16
Description: NF2992
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2992_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 13 - 322
Target Start/End: Complemental strand, 4345564 - 4345255
Alignment:
| Q |
13 |
gaatgataggtcatggtgaattaaacgtttgaggtctggttcagttagagttatataacttttaggtcatggtgaattataacatttgagtatgatttct |
112 |
Q |
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| T |
4345564 |
gaatgataggtcatggtgaattaaacgtttgaggtctggttcagttagagttatataacttttaagtcatggtgaattataacatttgagtatgatttct |
4345465 |
T |
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| Q |
113 |
tcatatgatcaatgcaannnnnnnaaggtctaatatgtctattaggaagcttgacttgacatgcatgatgacctatgtaataccttatatctgttgaaga |
212 |
Q |
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| T |
4345464 |
tcatatgatcaatgcaatttttttaaggtctaatatgtctattaggaagcttgacttgacatgcatgatgacctatgtaataccttatatctattgaaga |
4345365 |
T |
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| Q |
213 |
tatattcaattatatccgcaaatttatttacaggtttagctaggtatatttatatatttttgccattaactaaaaataaaggtttacctaggtatttata |
312 |
Q |
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| T |
4345364 |
tatattcaattatatccgcaaatttatttacaggtttagctaggtatatttatatatttttgccattaactaaaaataaaggtttacctaggtatttata |
4345265 |
T |
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| Q |
313 |
aagttcaaca |
322 |
Q |
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| T |
4345264 |
aagttcaaca |
4345255 |
T |
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