View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2992_low_22 (Length: 237)
Name: NF2992_low_22
Description: NF2992
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2992_low_22 |
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Alignment Details
Target: chr2 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 17595183 - 17595404
Alignment:
| Q |
1 |
aattggaatagtatcagtgatattaaccatattgtttgctcttttttgttactttgtgttacgccctccactcaacaaaataatagtnnnnnnnncagat |
100 |
Q |
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| T |
17595183 |
aattggaatagtatcagtgatattaaccatattgtttgctcttttttgttactttgtgttacgccctccactcaacaaaataatagtaaaaaaaacagat |
17595282 |
T |
|
| Q |
101 |
gaagataaatgggatgcataccaattaacctatgtattagttggtgttattgcatgtgcaactgttactgaatttcttggtacacattcagttgttggag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
17595283 |
gaagataaatgggatgcataccaattaacctatgtattagttggtgttattgcatgtgcaactgttactgaatttcttggtacacattctgttgttggag |
17595382 |
T |
|
| Q |
201 |
cattgatttttgggttaattct |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
17595383 |
cattgatttttgggttaattct |
17595404 |
T |
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