View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2993_high_13 (Length: 236)
Name: NF2993_high_13
Description: NF2993
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2993_high_13 |
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Alignment Details
Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 26036854 - 26036637
Alignment:
| Q |
1 |
atgttatgacattcgagtttccagagctactttgccatttgattattttgcttccagttttcaatatgttagtaattggacatgcttaattgagacctta |
100 |
Q |
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| T |
26036854 |
atgttatgacattcgagtttccagagctactttgccatttgattattttgctttcagttttcaatatgttagtaattggatatgcttaattgagacctta |
26036755 |
T |
|
| Q |
101 |
agtaattcttacagttttcaattcataggtgcttgtgatctctcatcgcttggaaaccgttatgatggctaaaagaatattccttttggataatggaaag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26036754 |
agtaattcttacagttttcaattcataggtgcttgtgatctctcatcgcttggaaaccgttatgatggctaaaagaatattccttttggataatggaaag |
26036655 |
T |
|
| Q |
201 |
ctagaagagctgcctcgt |
218 |
Q |
| |
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|||||||||||||||||| |
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| T |
26036654 |
ctagaagagctgcctcgt |
26036637 |
T |
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