View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2993_low_17 (Length: 284)

Name: NF2993_low_17
Description: NF2993
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2993_low_17
NF2993_low_17
[»] scaffold0277 (2 HSPs)
scaffold0277 (1-258)||(4830-5087)
scaffold0277 (15-261)||(13788-14034)
[»] chr6 (66 HSPs)
chr6 (15-261)||(28786063-28786309)
chr6 (15-261)||(28792184-28792430)
chr6 (15-261)||(28780924-28781170)
chr6 (15-261)||(27725001-27725247)
chr6 (15-261)||(27718535-27718781)
chr6 (15-261)||(27698650-27698895)
chr6 (15-261)||(27611158-27611404)
chr6 (15-261)||(27229019-27229263)
chr6 (15-262)||(27604860-27605113)
chr6 (15-261)||(26802223-26802473)
chr6 (15-261)||(26655774-26656020)
chr6 (15-261)||(26761745-26761991)
chr6 (28-262)||(27338220-27338454)
chr6 (28-262)||(27398960-27399194)
chr6 (111-261)||(27531353-27531503)
chr6 (28-262)||(27678744-27678978)
chr6 (20-261)||(31284078-31284319)
chr6 (62-262)||(27593175-27593375)
chr6 (92-261)||(26884025-26884194)
chr6 (59-262)||(26622805-26623008)
chr6 (59-262)||(26728783-26728986)
chr6 (124-262)||(26055820-26055958)
chr6 (124-262)||(26075790-26075928)
chr6 (15-250)||(26823631-26823860)
chr6 (60-251)||(26861446-26861637)
chr6 (124-262)||(25481636-25481774)
chr6 (124-262)||(25579613-25579751)
chr6 (28-262)||(27706557-27706791)
chr6 (112-261)||(26646361-26646510)
chr6 (112-261)||(26752329-26752478)
chr6 (124-262)||(25538434-25538572)
chr6 (124-262)||(26142759-26142897)
chr6 (15-204)||(27427816-27428003)
chr6 (62-262)||(27677769-27677969)
chr6 (124-255)||(26048739-26048870)
chr6 (124-255)||(26069908-26070039)
chr6 (125-263)||(28234459-28234597)
chr6 (160-262)||(29825957-29826059)
chr6 (125-253)||(27214312-27214440)
chr6 (125-253)||(27234788-27234916)
chr6 (161-255)||(26635621-26635715)
chr6 (161-255)||(26741587-26741681)
chr6 (125-261)||(27665273-27665409)
chr6 (173-255)||(26848603-26848685)
chr6 (15-88)||(25538358-25538431)
chr6 (162-255)||(26959097-26959190)
chr6 (86-263)||(28185222-28185399)
chr6 (167-255)||(26617263-26617351)
chr6 (167-255)||(26723191-26723279)
chr6 (161-261)||(26949592-26949692)
chr6 (148-263)||(28181032-28181147)
chr6 (92-263)||(28325343-28325514)
chr6 (161-255)||(25071590-25071684)
chr6 (15-89)||(26055744-26055818)
chr6 (161-255)||(26974983-26975077)
chr6 (136-190)||(28098596-28098650)
chr6 (15-88)||(25481560-25481633)
chr6 (15-88)||(26048663-26048736)
chr6 (15-88)||(26069832-26069905)
chr6 (15-88)||(26075714-26075787)
chr6 (15-88)||(26142683-26142756)
chr6 (174-255)||(26811453-26811534)
chr6 (128-263)||(28242702-28242837)
chr6 (125-263)||(28226845-28226983)
chr6 (209-262)||(26937073-26937126)
chr6 (125-177)||(2184183-2184235)
[»] scaffold0349 (3 HSPs)
scaffold0349 (15-261)||(3578-3824)
scaffold0349 (15-261)||(14511-14756)
scaffold0349 (15-156)||(8062-8203)
[»] scaffold1254 (1 HSPs)
scaffold1254 (28-261)||(73-306)
[»] scaffold0419 (1 HSPs)
scaffold0419 (28-261)||(7323-7556)
[»] chr4 (8 HSPs)
chr4 (17-261)||(18699543-18699787)
chr4 (11-261)||(18655620-18655870)
chr4 (11-261)||(18679710-18679960)
chr4 (11-261)||(18731647-18731897)
chr4 (57-261)||(18724228-18724432)
chr4 (15-204)||(17989250-17989437)
chr4 (15-204)||(18073552-18073739)
chr4 (134-262)||(5091109-5091237)
[»] chr1 (3 HSPs)
chr1 (33-255)||(28164511-28164733)
chr1 (57-261)||(268500-268704)
chr1 (36-222)||(28127862-28128042)
[»] scaffold0003 (1 HSPs)
scaffold0003 (15-204)||(59360-59547)
[»] scaffold0038 (4 HSPs)
scaffold0038 (125-263)||(34620-34758)
scaffold0038 (92-263)||(116658-116829)
scaffold0038 (128-263)||(42864-42999)
scaffold0038 (125-263)||(27343-27481)
[»] chr8 (2 HSPs)
chr8 (68-261)||(29273926-29274119)
chr8 (112-263)||(31903733-31903884)
[»] scaffold0019 (1 HSPs)
scaffold0019 (148-263)||(58436-58551)
[»] chr2 (2 HSPs)
chr2 (125-255)||(17993846-17993976)
chr2 (134-180)||(3279592-3279638)
[»] scaffold0781 (1 HSPs)
scaffold0781 (125-177)||(91-143)


Alignment Details
Target: scaffold0277 (Bit Score: 234; Significance: 1e-129; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 5087 - 4830
Alignment:
Q  1 aacttattcattaaattcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5087 aacttattcattaaattcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatcctcttca 4988  T
Q  101 ttttgctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagg 200  Q
    |||| || || ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  4987 ttttcctatggattcacttaccaagtgttcctcagttttaggggcattgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagg 4888  T
Q  201 gaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatc 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4887 gaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatc 4830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 15 - 261
Target Start/End: Complemental strand, 14034 - 13788
Alignment:
Q  15 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcatt 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| || |||| ||||||||| ||||||||||||| |||||||||    
T  14034 attcatattctgaattctcaaactcttttttcatccaatttctctcaattatcatggctatgcaattaccttcctcttcctcttcattttcctctgcatt 13935  T
Q  115 cacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttc 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13934 cacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttc 13835  T
Q  215 attgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  13834 attgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 13788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 227; Significance: 1e-125; HSPs: 66)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 15 - 261
Target Start/End: Original strand, 28786063 - 28786309
Alignment:
Q  15 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcatt 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || || |||    
T  28786063 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatcctcttcattttcctatggatt 28786162  T
Q  115 cacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttc 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28786163 cacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttc 28786262  T
Q  215 attgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  28786263 attgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 28786309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 15 - 261
Target Start/End: Original strand, 28792184 - 28792430
Alignment:
Q  15 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcatt 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || || |||    
T  28792184 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatcctcttcattttcctatggatt 28792283  T
Q  115 cacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttc 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28792284 cacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttc 28792383  T
Q  215 attgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  28792384 attgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 28792430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 15 - 261
Target Start/End: Original strand, 28780924 - 28781170
Alignment:
Q  15 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcatt 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| || |||| ||||||||| ||||||||||||| |||||||||    
T  28780924 attcatattctgaattctcaaactcttttttcatccaatttctctcaattatcatggctatgcaattaccttcctcttcctcttcattttcctctgcatt 28781023  T
Q  115 cacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttc 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28781024 cacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttc 28781123  T
Q  215 attgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  28781124 attgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 28781170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 15 - 261
Target Start/End: Complemental strand, 27725247 - 27725001
Alignment:
Q  15 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcatt 114  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||| | ||||| ||||||||||||||||||||||||||||||| || || |||    
T  27725247 attcatattctgcattctcaaactcttttttcatcctatttctctcaattgtcatggctatacaatcaccttcctcatcctcttcattttcctatggatt 27725148  T
Q  115 cacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttc 214  Q
    |||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  27725147 cacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttc 27725048  T
Q  215 attgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  27725047 attgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 27725001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 15 - 261
Target Start/End: Complemental strand, 27718781 - 27718535
Alignment:
Q  15 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcatt 114  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||| | |  || |||    
T  27718781 attcatattctgcattctcaaactcttttttcatcctatttctctcaattctcatggctatacaatcaccttcctcatcctcttcattctcccatggatt 27718682  T
Q  115 cacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttc 214  Q
    |||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  27718681 cacttaccaagtgttcctcagttttaggggcactgacactcggcacagttttaccggaaatctctacaaggctcttactgacaagggaatccataccttc 27718582  T
Q  215 attgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  27718581 attgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 27718535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 15 - 261
Target Start/End: Complemental strand, 27698895 - 27698650
Alignment:
Q  15 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcatt 114  Q
    |||||||||||| ||||||||||||||||| ||||| ||||||||||||||| ||||| ||||||||||||||||||||| ||||||||| || || |||    
T  27698895 attcatattctgcattctcaaactcttttt-catcctatttctctcaattctcatggctatacaatcaccttcctcatccacttcattttcctatggatt 27698797  T
Q  115 cacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttc 214  Q
    |||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  27698796 cacttaccaagtgttcatcagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttc 27698697  T
Q  215 attgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  27698696 attgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 27698650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 15 - 261
Target Start/End: Complemental strand, 27611404 - 27611158
Alignment:
Q  15 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcatt 114  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||| || |||| | ||||||| || |||||||||| || || |||    
T  27611404 attcatattctgcattctcaaactcttttttcatccaatttctctcaattttcatggctatgcaattagcttcctcttcttcttcattttcctatggatt 27611305  T
Q  115 cacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttc 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  27611304 cacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttc 27611205  T
Q  215 attgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 261  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  27611204 attgatgacaatgatcttccaagaggagatgaaatcacaccatcact 27611158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 15 - 261
Target Start/End: Original strand, 27229019 - 27229263
Alignment:
Q  15 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcatt 114  Q
    |||||||||||| ||||| ||||||||||  ||||||||||||||||| ||| ||||| ||||||||||||||||| ||||||||||||| || || |||    
T  27229019 attcatattctgcattctaaaactctttt--catccaatttctctcaagtctcatggctatacaatcaccttcctcttcctcttcattttcctttggatt 27229116  T
Q  115 cacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttc 214  Q
    |||||||||||||||||| ||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| | ||||||    
T  27229117 cacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttc 27229216  T
Q  215 attgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 261  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  27229217 attgatgacaatgatcttcaaagaggagacgaaatcacaccatcact 27229263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 15 - 262
Target Start/End: Complemental strand, 27605113 - 27604860
Alignment:
Q  15 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctc------ttcattttgctc 108  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| || |||| |||||||||||||||      |||||||| ||     
T  27605113 attcatattctgcattctcaaactcttttttcatccaatttctctcaattctcatggctatgcaattaccttcctcatcctcatcctcttcattttccta 27605014  T
Q  109 tgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaa 208  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||  | ||||||||||| ||||||||||||||||||||||||||||||||  |     
T  27605013 tgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaattcat 27604914  T
Q  209 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactt 262  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||| |||||    
T  27604913 accttcattgatgaaaatgatcttcgaagaggagatgaaatcacaccagcactt 27604860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 15 - 261
Target Start/End: Original strand, 26802223 - 26802473
Alignment:
Q  15 attcatattctgaattctcaaactctttt----ttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctg 110  Q
    |||||||||||| ||||||||||||||||    ||||||||||||||| ||||| | ||||| || || || ||||||||||||||||||||||  | ||    
T  26802223 attcatattctgcattctcaaactcttttttttttcatccaatttctcacaattttcatggctatgcagtctccttcctcatcctcttcattttcttatg 26802322  T
Q  111 cattcacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaac 210  Q
     |||||||||||||||||||||||||||||||||||||||||||||  | |||||||| || ||||||||||||||||||| ||||||||||||| | ||    
T  26802323 gattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccatac 26802422  T
Q  211 cttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26802423 cttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 26802473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 15 - 261
Target Start/End: Original strand, 26655774 - 26656020
Alignment:
Q  15 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcatt 114  Q
    |||||||||||| |||| ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| || ||  ||    
T  26655774 attcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctcatcctcttcattttcctatgggtt 26655873  T
Q  115 cacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttc 214  Q
     |  |||||||||||||||||||||||||||| |||||| || || ||||||||||| ||||||||||||||||||| ||| ||||||||| | || |||    
T  26655874 taaataccaagtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaaggctcttattgataagggaatccatactttc 26655973  T
Q  215 attgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 261  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||    
T  26655974 attgatgacaatgatcttctcagaggagatgaaatcacaccatcact 26656020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 15 - 261
Target Start/End: Original strand, 26761745 - 26761991
Alignment:
Q  15 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcatt 114  Q
    |||||||||||| |||| ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| || ||  ||    
T  26761745 attcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctcatcctcttcattttcctatgggtt 26761844  T
Q  115 cacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttc 214  Q
     |  |||||||||||||||||||||||||||| |||||| || || ||||||||||| ||||||||||||||||||| ||| ||||||||| | || |||    
T  26761845 taaataccaagtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaaggctcttattgataagggaatccatactttc 26761944  T
Q  215 attgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 261  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||    
T  26761945 attgatgacaatgatcttctcagaggagatgaaatcacaccatcact 26761991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 28 - 262
Target Start/End: Complemental strand, 27338454 - 27338220
Alignment:
Q  28 attctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcattcacttaccaagtg 127  Q
    ||||||||||| ||||||||||  ||||||||||||||| ||||| || ||||||| |||||| ||||||||| ||| |||||  ||||  ||||| |||    
T  27338454 attctcaaacttttttttcatcttatttctctcaattctcatggctatgcaatcactttcctcttcctcttcaatttcctctgggttcaaataccatgtg 27338355  T
Q  128 ttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatg 227  Q
    |||||||||||||||| || ||||||||   | ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  27338354 ttcctcagttttagggacattgacactctttacggttttaccggcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacg 27338255  T
Q  228 atcttcaaagaggagatgaaatcacaccatcactt 262  Q
    ||||| ||||||||||||||| |||||||||||||    
T  27338254 atcttgaaagaggagatgaaagcacaccatcactt 27338220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 28 - 262
Target Start/End: Complemental strand, 27399194 - 27398960
Alignment:
Q  28 attctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcattcacttaccaagtg 127  Q
    ||||||||||| ||||||||||  ||||||||||||||| ||||| || ||||||| |||||| ||||||||| ||| |||||  ||||  ||||| |||    
T  27399194 attctcaaacttttttttcatcttatttctctcaattctcatggctatgcaatcactttcctcttcctcttcaatttcctctgggttcaaataccatgtg 27399095  T
Q  128 ttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatg 227  Q
    |||||||||||||||| || ||||||||   | ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  27399094 ttcctcagttttagggacattgacactctttacggttttaccggcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacg 27398995  T
Q  228 atcttcaaagaggagatgaaatcacaccatcactt 262  Q
    ||||| ||||||||||||||| |||||||||||||    
T  27398994 atcttgaaagaggagatgaaagcacaccatcactt 27398960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 111 - 261
Target Start/End: Complemental strand, 27531503 - 27531353
Alignment:
Q  111 cattcacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaac 210  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||    
T  27531503 cattcacttaccaagtgttcctcagttttaggggcgcggacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatctatac 27531404  T
Q  211 cttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27531403 cttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 27531353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 28 - 262
Target Start/End: Original strand, 27678744 - 27678978
Alignment:
Q  28 attctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcattcacttaccaagtg 127  Q
    |||||||||||||||||||||| ||||||||| || ||| ||||| || |||||||||||||| ||| ||||| ||| || ||  | ||  ||||||||     
T  27678744 attctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcaccttcctcttccacttcaatttcctatgagtacaaataccaagta 27678843  T
Q  128 ttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatg 227  Q
    ||||||||||| || || | |||||||||  | ||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||| | ||||    
T  27678844 ttcctcagtttcagaggaagtgacactcggtacggtttcaccgggaatctctacaaggctcttactgacaagggaatcaacaccttcattgataagaatg 27678943  T
Q  228 atcttcaaagaggagatgaaatcacaccatcactt 262  Q
     ||||||||||||||||||||||||||||||||||    
T  27678944 gtcttcaaagaggagatgaaatcacaccatcactt 27678978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 20 - 261
Target Start/End: Original strand, 31284078 - 31284319
Alignment:
Q  20 tattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcattcactt 119  Q
    ||||||| ||||||||| ||||| ||||||||  ||||||||| ||| ||||| || |||||| ||||||| ||||||||| ||| || || |||||  |    
T  31284078 tattctgcattctcaaattctttcttcatccatattctctcaaatctcatggctatgcaatcatcttcctcttcctcttcaatttcctatgtattcaaat 31284177  T
Q  120 accaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattga 219  Q
    ||||||| ||||| ||||| ||||| | |||||||||  ||||||| ||||| ||||||||||||||||||||||||||||||||| | |||||||||||    
T  31284178 accaagtattccttagtttcaggggaagtgacactcggtatggtttcaccggcaatctctacaaggctcttactgacaagggaatccacaccttcattga 31284277  T
Q  220 tgacaatgatcttcaaagaggagatgaaatcacaccatcact 261  Q
    ||| | ||| ||||||||||| ||||||||||||||||||||    
T  31284278 tgatagtgaacttcaaagaggggatgaaatcacaccatcact 31284319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 62 - 262
Target Start/End: Complemental strand, 27593375 - 27593175
Alignment:
Q  62 attcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccatg 161  Q
    ||||| ||||| || |||||||||||||| ||| ||||| ||| || ||  | ||  |||||||| ||||||||||| || || | |||||||||  | |    
T  27593375 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 27593276  T
Q  162 gttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 261  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  27593275 gtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcact 27593176  T
Q  262 t 262  Q
    |    
T  27593175 t 27593175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 92 - 261
Target Start/End: Original strand, 26884025 - 26884194
Alignment:
Q  92 tcctcttcattttgctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctctta 191  Q
    ||||||||||||| || || ||||||||||||||||||||||||||| || || | |||||||||  ||||||| || ||||||||||||||||||||||    
T  26884025 tcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctctta 26884124  T
Q  192 ctgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 261  Q
    || ||||||||||| | |||||||||||||| ||| |||||| |||||||   |||||||||||||||||    
T  26884125 ctaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcact 26884194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 59 - 262
Target Start/End: Original strand, 26622805 - 26623008
Alignment:
Q  59 tcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgcc 158  Q
    |||||| | ||||| || |||||||| ||||| ||||||||| ||| || |  |||||  |||||||||||||| ||||| || |||| |||||||||      
T  26622805 tcaattatcatggctatgcaatcaccatcctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggt 26622904  T
Q  159 atggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatc 258  Q
    | ||||| || |||||||||||||||||||||||||||||||||||| | ||||||||||||||   ||| ||||||||||| || ||||||| ||||||    
T  26622905 acggtttcactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatc 26623004  T
Q  259 actt 262  Q
    ||||    
T  26623005 actt 26623008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 59 - 262
Target Start/End: Original strand, 26728783 - 26728986
Alignment:
Q  59 tcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgcc 158  Q
    |||||| | ||||| || |||||||| ||||| ||||||||| ||| || |  |||||  |||||||||||||| ||||| || |||| |||||||||      
T  26728783 tcaattatcatggctatgcaatcaccatcctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggt 26728882  T
Q  159 atggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatc 258  Q
    | ||||| || |||||||||||||||||||||||||||||||||||| | ||||||||||||||   ||| ||||||||||| || ||||||| ||||||    
T  26728883 acggtttcactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatc 26728982  T
Q  259 actt 262  Q
    ||||    
T  26728983 actt 26728986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 124 - 262
Target Start/End: Original strand, 26055820 - 26055958
Alignment:
Q  124 agtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgac 223  Q
    ||||||||||| ||| ||||||| |||||||||| |   ||||||||| |||||||| |||||||||  |||||||||||| || || |||||||||||     
T  26055820 agtgttcctcattttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaa 26055919  T
Q  224 aatgatcttcaaagaggagatgaaatcacaccatcactt 262  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  26055920 aatgatcttcaaagaggagatgaaatcacatcatcactt 26055958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 124 - 262
Target Start/End: Original strand, 26075790 - 26075928
Alignment:
Q  124 agtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgac 223  Q
    ||||||||||| ||| ||||||| |||||||||| |   ||||||||| |||||||| |||||||||  |||||||||||| || || |||||||||||     
T  26075790 agtgttcctcaatttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaa 26075889  T
Q  224 aatgatcttcaaagaggagatgaaatcacaccatcactt 262  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  26075890 aatgatcttcaaagaggagatgaaatcacatcatcactt 26075928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 250
Target Start/End: Original strand, 26823631 - 26823860
Alignment:
Q  15 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcatt 114  Q
    |||||||||||| ||||||||||||||| ||| ||||||||||||||||||| ||||| || || ||| |||||||      |||| |||  | ||  ||    
T  26823631 attcatattctgcattctcaaactctttcttcgtccaatttctctcaattctcatggctatgcagtcaacttcctc------ttcagtttcatatgattt 26823724  T
Q  115 cacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttc 214  Q
    ||  ||||||||||| ||||||||||| ||| ||||||||||  |||  |||||||| |||||||||||||||||||| |||||||||||| | |||||     
T  26823725 caaataccaagtgtttctcagttttagaggcgctgacactcggtatgaatttaccggcaatctctacaaggctcttacagacaagggaatccacaccttt 26823824  T
Q  215 attgatgacaatgatcttcaaagaggagatgaaatc 250  Q
     |||||||   ||| ||||||||||| ||| |||||    
T  26823825 tttgatgatcgtgaacttcaaagaggggataaaatc 26823860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 60 - 251
Target Start/End: Original strand, 26861446 - 26861637
Alignment:
Q  60 caattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgcca 159  Q
    ||||||| ||||| || |||||||||| ||| ||||||||  ||| || || |||||  ||||| || ||||||||||| || || | |||||||||  |    
T  26861446 caattctgatggctatgcaatcaccttgctcttcctcttccatttcctatggattcaaataccaggtattcctcagtttcagaggaagtgacactcggta 26861545  T
Q  160 tggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatca 251  Q
    |||||||||||| ||||||||||||||||||||||||||||||||  | |||||||| |||||   ||| ||||||||||| ||||||||||    
T  26861546 tggttttaccggtaatctctacaaggctcttactgacaagggaattcacaccttcatggatgatcgtgaacttcaaagaggggatgaaatca 26861637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 124 - 262
Target Start/End: Original strand, 25481636 - 25481774
Alignment:
Q  124 agtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgac 223  Q
    ||||||||||| ||| ||||||| |||||||||| |   ||||||||| |||||||| |||||||||  ||||||||||||    || |||||||||||     
T  25481636 agtgttcctcaatttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgaa 25481735  T
Q  224 aatgatcttcaaagaggagatgaaatcacaccatcactt 262  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25481736 aatgatcttcaaagaggagatgaaatcacaccatcactt 25481774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 124 - 262
Target Start/End: Original strand, 25579613 - 25579751
Alignment:
Q  124 agtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgac 223  Q
    ||||||||||||||| || |||| |||||||||| |   ||||||||| |||||||| |||||||||  ||||||||||||    |||||| |||||||     
T  25579613 agtgttcctcagtttcagaggcagtgacactcgcaacacttttaccggtaatctctataaggctcttgttgacaagggaattcgtaccttctttgatgat 25579712  T
Q  224 aatgatcttcaaagaggagatgaaatcacaccatcactt 262  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25579713 aatgatcttcaaagaggagatgaaatcacaccatcactt 25579751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 262
Target Start/End: Complemental strand, 27706791 - 27706557
Alignment:
Q  28 attctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcattcacttaccaagtg 127  Q
    |||||||||||||||||||||| ||||||||| || ||| ||||| || |||||||||| ||| ||| ||||| ||| || ||  | ||  ||||||||     
T  27706791 attctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagta 27706692  T
Q  128 ttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatg 227  Q
    ||||||||||| || ||   |||||||||  | ||||| || || ||||||||||||||| ||  ||||||||||||| | |||||||||||  |  |||    
T  27706691 ttcctcagtttcagaggaggtgacactcggtacggtttcacaggcaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 27706592  T
Q  228 atcttcaaagaggagatgaaatcacaccatcactt 262  Q
    | ||||||||| | |||||||||||||||||||||    
T  27706591 aacttcaaagaagggatgaaatcacaccatcactt 27706557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 261
Target Start/End: Original strand, 26646361 - 26646510
Alignment:
Q  112 attcacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaacc 211  Q
    |||||| ||||| || |||||||  || ||||||| |||||||||  | |||||||| ||| |||||||||||||||||||||||||||||||  | |||    
T  26646361 attcacctaccaggtcttcctcaacttcaggggcagtgacactcgtgacggttttactggacatctctacaaggctcttactgacaagggaattcacacc 26646460  T
Q  212 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 261  Q
    |||||||||||   ||||||| | ||||||||||||||||||||||||||    
T  26646461 ttcattgatgattgtgatcttaagagaggagatgaaatcacaccatcact 26646510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 261
Target Start/End: Original strand, 26752329 - 26752478
Alignment:
Q  112 attcacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaacc 211  Q
    |||||| ||||| || |||||||  || ||||||| |||||||||  | |||||||| ||| |||||||||||||||||||||||||||||||  | |||    
T  26752329 attcacctaccaggtcttcctcaacttcaggggcagtgacactcgtgacggttttactggacatctctacaaggctcttactgacaagggaattcacacc 26752428  T
Q  212 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 261  Q
    |||||||||||   ||||||| | ||||||||||||||||||||||||||    
T  26752429 ttcattgatgattgtgatcttaagagaggagatgaaatcacaccatcact 26752478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 124 - 262
Target Start/End: Original strand, 25538434 - 25538572
Alignment:
Q  124 agtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgac 223  Q
    ||||||||||||||| ||||||| |||||||||| |    |||||||| |||||||| |||||||||  |||||||||||| |  || ||||| |||||     
T  25538434 agtgttcctcagtttcaggggcagtgacactcgcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattagtactttcatagatgat 25538533  T
Q  224 aatgatcttcaaagaggagatgaaatcacaccatcactt 262  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  25538534 aatgatcttgaaagaggagatgaaatcacaccatcactt 25538572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 124 - 262
Target Start/End: Original strand, 26142759 - 26142897
Alignment:
Q  124 agtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgac 223  Q
    ||||||||||||||| ||||||| |||||||||| |    |||||||| |||||||| |||||||||  ||||||||||||    || |||||||||||     
T  26142759 agtgttcctcagtttcaggggcagtgacactcgcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgat 26142858  T
Q  224 aatgatcttcaaagaggagatgaaatcacaccatcactt 262  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  26142859 aatgatcttgaaagaggagatgaaatcacaccatcactt 26142897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 15 - 204
Target Start/End: Complemental strand, 27428003 - 27427816
Alignment:
Q  15 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcatt 114  Q
    |||||||||||| |||||||||||||| |  ||||  ||||||||||||||| ||||| || |||| ||||| ||  ||||||||||||| || ||||||    
T  27428003 attcatattctgcattctcaaactcttct--catcttatttctctcaattctcatggccatgcaattacctttctattcctcttcattttcctatgcatt 27427906  T
Q  115 cacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaat 204  Q
    || |||| | |||||||||| || || |||||| ||||||||  | ||||| ||||| |||||||  |||||||||| ||||||||||||    
T  27427905 cagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaat 27427816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 62 - 262
Target Start/End: Complemental strand, 27677969 - 27677769
Alignment:
Q  62 attcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccatg 161  Q
    ||||| ||||| || |||||||||||||| ||| ||||| ||| || ||  | ||  |||||||| ||||||| ||| || || | |||||||||  | |    
T  27677969 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgagtacaaataccaagtattcctcaatttcagaggaagtgacactcggtacg 27677870  T
Q  162 gttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 261  Q
    |||| ||||| ||||||||||||||||||  ||||||||||||| | |||||||||||  |  |||| ||||||||||| ||||||||||||||||||||    
T  27677869 gtttcaccggcaatctctacaaggctcttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcact 27677770  T
Q  262 t 262  Q
    |    
T  27677769 t 27677769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 124 - 255
Target Start/End: Original strand, 26048739 - 26048870
Alignment:
Q  124 agtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgac 223  Q
    ||||||||||||||| ||||||| |||||||||| |   ||||||||| |||||||| |||||||| | ||||||||||||    || |||||||||||     
T  26048739 agtgttcctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgat 26048838  T
Q  224 aatgatcttcaaagaggagatgaaatcacacc 255  Q
    ||||||||| ||||||||||||||||||||||    
T  26048839 aatgatcttgaaagaggagatgaaatcacacc 26048870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 124 - 255
Target Start/End: Original strand, 26069908 - 26070039
Alignment:
Q  124 agtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgac 223  Q
    ||||||||||||||| ||||||| |||||||||| |   ||||||||| |||||||| |||||||| | ||||||||||||    || |||||||||||     
T  26069908 agtgttcctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgat 26070007  T
Q  224 aatgatcttcaaagaggagatgaaatcacacc 255  Q
    ||||||||| ||||||||||||||||||||||    
T  26070008 aatgatcttgaaagaggagatgaaatcacacc 26070039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 125 - 263
Target Start/End: Original strand, 28234459 - 28234597
Alignment:
Q  125 gtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgaca 224  Q
    |||||||| |||||||| || | |||||||||| |||||||||||| ||||||||| |  ||||||  | ||||||||||| | ||||||||||||||||    
T  28234459 gtgttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatccacaccttcattgatgaca 28234558  T
Q  225 atgatcttcaaagaggagatgaaatcacaccatcacttt 263  Q
      || |||||| ||||||||||||| |||||||||||||    
T  28234559 gggagcttcaaggaggagatgaaataacaccatcacttt 28234597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 160 - 262
Target Start/End: Original strand, 29825957 - 29826059
Alignment:
Q  160 tggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatca 259  Q
    |||||||||||| ||||||||||| ||||| |||||||||  |||    ||||||||||||||||| || ||||||||||| || ||||||||||| |||    
T  29825957 tggttttaccggcaatctctacaaagctctaactgacaagaaaattcgcaccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctca 29826056  T
Q  260 ctt 262  Q
    |||    
T  29826057 ctt 29826059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 253
Target Start/End: Original strand, 27214312 - 27214440
Alignment:
Q  125 gtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgaca 224  Q
    |||||| | ||||| ||||| || |||||||| || ||||| ||||| |||||||| || ||||||  |||||| ||||||  |||||||||||||||||    
T  27214312 gtgttcattagtttcaggggtaccgacactcgacacggtttcaccggtaatctctataaagctctttgtgacaaaggaatccgaaccttcattgatgaca 27214411  T
Q  225 atgatcttcaaagaggagatgaaatcaca 253  Q
    | || ||||| ||||| || |||||||||    
T  27214412 aggagcttcagagaggtgacgaaatcaca 27214440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 253
Target Start/End: Complemental strand, 27234916 - 27234788
Alignment:
Q  125 gtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgaca 224  Q
    |||||| | ||||| ||||| || |||||||| || ||||| ||||| |||||||| || ||||||  |||||| ||||||  |||||||||||||||||    
T  27234916 gtgttcattagtttcaggggtaccgacactcgacacggtttcaccggtaatctctataaagctctttgtgacaaaggaatccgaaccttcattgatgaca 27234817  T
Q  225 atgatcttcaaagaggagatgaaatcaca 253  Q
    | || ||||| ||||| || |||||||||    
T  27234816 aggagcttcagagaggtgacgaaatcaca 27234788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 255
Target Start/End: Original strand, 26635621 - 26635715
Alignment:
Q  161 ggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacacc 255  Q
    ||||| ||||| || ||||| || |||||| ||||||| |||||||| ||||||||||||||||| || ||| ||| ||| ||||||||||||||    
T  26635621 ggtttcaccggtaacctctataaagctctttctgacaaaggaatcaacaccttcattgatgacaaggagcttaaaaaaggggatgaaatcacacc 26635715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 255
Target Start/End: Original strand, 26741587 - 26741681
Alignment:
Q  161 ggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacacc 255  Q
    ||||| ||||| || ||||| || |||||| ||||||| |||||||| ||||||||||||||||| || ||| ||| ||| ||||||||||||||    
T  26741587 ggtttcaccggtaacctctataaagctctttctgacaaaggaatcaacaccttcattgatgacaaggagcttaaaaaaggggatgaaatcacacc 26741681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 125 - 261
Target Start/End: Complemental strand, 27665409 - 27665273
Alignment:
Q  125 gtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgaca 224  Q
    |||||| | ||||| ||||| || ||||||||   |||||| ||||| || ||||| ||||||||| ||||||| |||||| | ||||||||||||||||    
T  27665409 gtgttcattagtttcaggggtaccgacactcgatttggtttcaccggtaacctctataaggctctttctgacaaaggaatccacaccttcattgatgaca 27665310  T
Q  225 atgatcttcaaagaggagatgaaatcacaccatcact 261  Q
    | || |||| ||  || || ||||||||||| |||||    
T  27665309 aggagcttccaactggtgacgaaatcacaccttcact 27665273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 255
Target Start/End: Original strand, 26848603 - 26848685
Alignment:
Q  173 aatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacacc 255  Q
    |||||||| || |||||| ||||||| ||||||  |||||||||||||||||| |||||||| || || ||||| ||||||||    
T  26848603 aatctctataaagctctttctgacaatggaatccgaaccttcattgatgacaaggatcttcagagtggtgatgagatcacacc 26848685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 25538358 - 25538431
Alignment:
Q  15 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcc 88  Q
    |||||||||||  ||| ||||| ||||||||||||||| |||| |||||||| ||||| || ||||||||||||    
T  25538358 attcatattctccattttcaaagtcttttttcatccaaattctttcaattctcatggctatgcaatcaccttcc 25538431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 255
Target Start/End: Original strand, 26959097 - 26959190
Alignment:
Q  162 gttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacacc 255  Q
    |||| ||||| || ||||| || |||||| ||||||| |||||| | ||||||||||||||||| || ||| ||| ||| ||||||||||||||    
T  26959097 gtttcaccggtaacctctataaagctctttctgacaaaggaatcgacaccttcattgatgacaaagagcttaaaaaaggggatgaaatcacacc 26959190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 263
Target Start/End: Original strand, 28185222 - 28185399
Alignment:
Q  86 tcctcatcctcttcattttgctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaagg 185  Q
    |||||||||||||| || | || || |||||| ||  | |||||||| || ||||| || | |||||||||  || ||||||| ||||||||| | |  |    
T  28185222 tcctcatcctcttccttctcctatggattcacctatgacgtgttccttagctttagaggtagtgacactcgttatcgttttactggaaatctcaatagag 28185321  T
Q  186 ctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcacttt 263  Q
    |||||  |||||||||||||  ||||||||| |||||||  || |||||| |||| || ||||| ||| |||||||||    
T  28185322 ctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcacttt 28185399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 255
Target Start/End: Original strand, 26617263 - 26617351
Alignment:
Q  167 accggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacacc 255  Q
    ||||| |||||||| || ||||||  |||||| ||| ||  |||||||||||||||||| || ||||| ||||| ||||||||||||||    
T  26617263 accggcaatctctataaagctctttgtgacaaaggagtccgaaccttcattgatgacaaggagcttcagagaggtgatgaaatcacacc 26617351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 255
Target Start/End: Original strand, 26723191 - 26723279
Alignment:
Q  167 accggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacacc 255  Q
    ||||| |||||||| || ||||||  |||||| ||| ||  |||||||||||||||||| || ||||| ||||| ||||||||||||||    
T  26723191 accggcaatctctataaagctctttgtgacaaaggagtccgaaccttcattgatgacaaggagcttcagagaggtgatgaaatcacacc 26723279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 261
Target Start/End: Original strand, 26949592 - 26949692
Alignment:
Q  161 ggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcac 260  Q
    ||||| ||||| |||||||| || |||||  ||||||||||||||  ||||||||||||||| || || ||||| | ||| || ||||||||||| ||||    
T  26949592 ggtttcaccggtaatctctataaagctctctctgacaagggaatccgaaccttcattgatgataaggagcttcagaaaggtgacgaaatcacaccttcac 26949691  T
Q  261 t 261  Q
    |    
T  26949692 t 26949692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 263
Target Start/End: Original strand, 28181032 - 28181147
Alignment:
Q  148 tgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaa 247  Q
    |||||||||  |||||||||| ||||||||| | |  ||||||  |||||||||||||  ||||||||| |||||||  || |||||| |||| || |||    
T  28181032 tgacactcgttatggttttactggaaatctcaatagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaa 28181131  T
Q  248 atcacaccatcacttt 263  Q
    || ||| |||||||||    
T  28181132 ataacatcatcacttt 28181147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 263
Target Start/End: Original strand, 28325343 - 28325514
Alignment:
Q  92 tcctcttcattttgctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctctta 191  Q
    |||||||| |||| || || |||||| ||  | |||||||| |||||||| || | |||||||||  |||||||||| |||||||||||||| | ||||     
T  28325343 tcctcttccttttcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatcttt 28325442  T
Q  192 ctgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcacttt 263  Q
     |   ||| ||||    ||||||||||||||||| || |||||| |||| || ||||| ||||| |||||||    
T  28325443 gtaggaagagaattcgtaccttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttt 28325514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 255
Target Start/End: Original strand, 25071590 - 25071684
Alignment:
Q  161 ggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacacc 255  Q
    ||||||||||| ||||| || || |||||| ||||||| |||||| | ||||| ||||||||||| || ||| | ||||| || |||||||||||    
T  25071590 ggttttaccggtaatctttataaagctctttctgacaaaggaatccacacctttattgatgacaaagagcttaagagaggtgacgaaatcacacc 25071684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 26055744 - 26055818
Alignment:
Q  15 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcct 89  Q
    |||||||||||  ||| ||||| ||||||||||||||  |||| |||||||| ||||| || |||||||||||||    
T  26055744 attcatattctccattttcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcct 26055818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 255
Target Start/End: Original strand, 26974983 - 26975077
Alignment:
Q  161 ggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacacc 255  Q
    ||||| ||||| || ||||| || |||||| ||||||| |||||||| | ||||||||||||||| || ||| ||| ||| || |||||||||||    
T  26974983 ggtttcaccggtaacctctataaagctctttctgacaaaggaatcaacatcttcattgatgacaaggagcttaaaaaaggggacgaaatcacacc 26975077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 28098650 - 28098596
Alignment:
Q  136 ttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctctt 190  Q
    |||||||||||| ||||||||  |||||||||| |||||||||||||| ||||||    
T  28098650 ttttaggggcaccgacactcggtatggttttactggaaatctctacaaagctctt 28098596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 25481560 - 25481633
Alignment:
Q  15 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcc 88  Q
    |||||||||||  ||| ||||| | ||||||||||||| |||| |||||||| ||||| || ||||||||||||    
T  25481560 attcatattctccattttcaaagttttttttcatccaaattctttcaattctcatggctatgcaatcaccttcc 25481633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 26048663 - 26048736
Alignment:
Q  15 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcc 88  Q
    |||||||||||  ||| ||||| ||||||||||||||  |||| |||||||| ||||| || ||||||||||||    
T  26048663 attcatattctccattttcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcc 26048736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 26069832 - 26069905
Alignment:
Q  15 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcc 88  Q
    |||||||||||  ||| ||||| ||||||||||||||  |||| |||||||| ||||| || ||||||||||||    
T  26069832 attcatattctccattttcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcc 26069905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 26075714 - 26075787
Alignment:
Q  15 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcc 88  Q
    |||||||||||  ||| ||||| ||||||||||||||  |||| |||||||| ||||| || ||||||||||||    
T  26075714 attcatattctccattttcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcc 26075787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 26142683 - 26142756
Alignment:
Q  15 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcc 88  Q
    |||||||||||  ||| ||||| ||||||||||||||  |||| |||||||| ||||| || ||||||||||||    
T  26142683 attcatattctccattttcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcc 26142756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 255
Target Start/End: Original strand, 26811453 - 26811534
Alignment:
Q  174 atctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacacc 255  Q
    ||||||| || ||||||  |||||| ||||||  |||||||||||||||||| || ||||| ||||| || |||||||||||    
T  26811453 atctctataaagctctttgtgacaaaggaatccgaaccttcattgatgacaaggagcttcagagaggtgacgaaatcacacc 26811534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 263
Target Start/End: Original strand, 28242702 - 28242837
Alignment:
Q  128 ttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatg 227  Q
    ||||| |||||||| || | |||||||||  |||||||||| |||||||||||||| | ||||  | | ||||||||    ||||||||||||||||  |    
T  28242702 ttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagag 28242801  T
Q  228 atcttcaaagaggagatgaaatcacaccatcacttt 263  Q
    | |||| | |||| ||  |||| |||||||||||||    
T  28242802 aacttccaggaggtgacaaaataacaccatcacttt 28242837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 263
Target Start/End: Original strand, 28226845 - 28226983
Alignment:
Q  125 gtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgaca 224  Q
    |||||||| |||||||| || | |||||||||  |||||||||| |||||||||||||  | ||||  | | ||||||||  | || ||| ||||||| |    
T  28226845 gtgttccttagttttagaggtattgacactcgttatggttttactggaaatctctacagtgatctttgtaagaagggaattcacacattctttgatgata 28226944  T
Q  225 atgatcttcaaagaggagatgaaatcacaccatcacttt 263  Q
      || |||||| |||| |||||||| ||| |||||||||    
T  28226945 gagagcttcaaggaggtgatgaaataacatcatcacttt 28226983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 26937073 - 26937126
Alignment:
Q  209 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactt 262  Q
    ||||||||||||||||| || || ||  ||||||| ||||||||||||||||||    
T  26937073 accttcattgatgacaaggagctccatggaggagaagaaatcacaccatcactt 26937126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 2184183 - 2184235
Alignment:
Q  125 gtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatct 177  Q
    |||||||| ||||| || ||  ||||||||||||||||||||||||| |||||    
T  2184183 gtgttcctaagtttcagaggagctgacactcgccatggttttaccggcaatct 2184235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 195; Significance: 1e-106; HSPs: 3)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 15 - 261
Target Start/End: Complemental strand, 3824 - 3578
Alignment:
Q  15 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcatt 114  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||| | ||||| ||||||||||||||||||||||||||||||| || || |||    
T  3824 attcatattctgcattctcaaactcttttttcatcctatttctctcaattgtcatggctatacaatcaccttcctcatcctcttcattttcctatggatt 3725  T
Q  115 cacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttc 214  Q
    |||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  3724 cacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttc 3625  T
Q  215 attgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  3624 attgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 3578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 15 - 261
Target Start/End: Complemental strand, 14756 - 14511
Alignment:
Q  15 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcatt 114  Q
    |||||||||||| ||||||||||||||||| ||||| ||||||||||||||| ||||| ||||||||||||||||||||| ||||||||| || || |||    
T  14756 attcatattctgcattctcaaactcttttt-catcctatttctctcaattctcatggctatacaatcaccttcctcatccacttcattttcctatggatt 14658  T
Q  115 cacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttc 214  Q
    |||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  14657 cacttaccaagtgttcatcagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttc 14558  T
Q  215 attgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  14557 attgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 14511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 15 - 156
Target Start/End: Complemental strand, 8203 - 8062
Alignment:
Q  15 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcatt 114  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||| | |  || |||    
T  8203 attcatattctgcattctcaaactcttttttcatcctatttctctcaattctcatggctatacaatcaccttcctcatcctcttcattctcccatggatt 8104  T
Q  115 cacttaccaagtgttcctcagttttaggggcactgacactcg 156  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  8103 cacttaccaagtgttcctcagttttaggggcactgacactcg 8062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 28 - 261
Target Start/End: Complemental strand, 306 - 73
Alignment:
Q  28 attctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcattcacttaccaagtg 127  Q
    |||||||||||||||||||||| |||||||||||||||| ||||| || ||||||||| |||| |||||||||||||  | |||||||||||||||||||    
T  306 attctcaaactcttttttcatctaatttctctcaattctcatggctatgcaatcacctccctcttcctcttcattttcatatgcattcacttaccaagtg 207  T
Q  128 ttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatg 227  Q
    ||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  206 ttccttagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatg 107  T
Q  228 atcttcaaagaggagatgaaatcacaccatcact 261  Q
    ||||||||||||||||||||||||||||||||||    
T  106 atcttcaaagaggagatgaaatcacaccatcact 73  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 28 - 261
Target Start/End: Original strand, 7323 - 7556
Alignment:
Q  28 attctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcattcacttaccaagtg 127  Q
    |||||||||||||||||||||| |||||||||||||||| ||||| || ||||||||| |||| |||||||||||||  | |||||||||||||||||||    
T  7323 attctcaaactcttttttcatctaatttctctcaattctcatggctatgcaatcacctccctcttcctcttcattttcatatgcattcacttaccaagtg 7422  T
Q  128 ttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatg 227  Q
    ||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7423 ttccttagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatg 7522  T
Q  228 atcttcaaagaggagatgaaatcacaccatcact 261  Q
    ||||||||||||||||||||||||||||||||||    
T  7523 atcttcaaagaggagatgaaatcacaccatcact 7556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 133; Significance: 3e-69; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 17 - 261
Target Start/End: Complemental strand, 18699787 - 18699543
Alignment:
Q  17 tcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcattca 116  Q
    |||||||||| |||||||||||||||||||||| | |||||||||||||| ||||| || |||||||||||||||||||||||||||| || |  |||||    
T  18699787 tcatattctgcattctcaaactcttttttcatctagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattca 18699688  T
Q  117 cttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcat 216  Q
    ||||||||||||||||||| || |||||||||||||||||  | |||||||| ||  |||||||||| ||||||||||||||||||||| | ||||||||    
T  18699687 cttaccaagtgttcctcagcttcaggggcactgacactcgtgacggttttactggccatctctacaaagctcttactgacaagggaatccacaccttcat 18699588  T
Q  217 tgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 261  Q
    |||||||  ||| || ||||| || |||||||||| |||||||||    
T  18699587 tgatgaccgtgacctgcaaagtggggatgaaatcaaaccatcact 18699543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 11 - 261
Target Start/End: Complemental strand, 18655870 - 18655620
Alignment:
Q  11 ttaaattcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctg 110  Q
    ||||| |||||||||| |||||||||||||||||||||||| |||||||||||| | ||||| |  |||||||||||||||||||||||||||| || |     
T  18655870 ttaaactcatattctgcattctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatc 18655771  T
Q  111 cattcacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaac 210  Q
     |||||||||||||||||||||||| || ||||||| |||||||||  | |||||||| ||  |||||||||| ||||||||||||||||||||| | ||    
T  18655770 gattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactgacaagggaatccacac 18655671  T
Q  211 cttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 261  Q
    |||||||||||||  ||| || ||||| || |||||||||| |||||||||    
T  18655670 cttcattgatgaccgtgagctgcaaagtggggatgaaatcaaaccatcact 18655620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 11 - 261
Target Start/End: Complemental strand, 18679960 - 18679710
Alignment:
Q  11 ttaaattcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctg 110  Q
    ||||| |||||||||| |||||||||||||||||||||||| |||||||| ||| | ||||| || |||||||||||||||| ||||||||||| || |     
T  18679960 ttaaactcatattctgcattctcaaactcttttttcatccagtttctctctattttcatggctatgcaatcaccttcctcattctcttcattttcctatc 18679861  T
Q  111 cattcacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaac 210  Q
     |||||||||||||||||||||||| || ||||||| |||||||||  | |||||||| ||  ||||||||||||||||||||||||| |||||| | ||    
T  18679860 gattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggtcatctctacaaggctcttactgacaaaggaatccacac 18679761  T
Q  211 cttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 261  Q
    |||||||||||||  ||| || |||||||| |||||||||| |||||||||    
T  18679760 cttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcact 18679710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 11 - 261
Target Start/End: Complemental strand, 18731897 - 18731647
Alignment:
Q  11 ttaaattcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctg 110  Q
    ||||| |||||||||| |||||||||||||||||||||||| |||||||| ||| | ||||| || |||||||||||||||||||||||||||| || |     
T  18731897 ttaaactcatattctgcattctcaaactcttttttcatccagtttctctcgattttcatggctatgcaatcaccttcctcatcctcttcattttcctatc 18731798  T
Q  111 cattcacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaac 210  Q
     |||||||||||||||||||||||| || ||||||| |||||||||  | |||||||| ||  |||||||||  ||||||||||||||||||||| | ||    
T  18731797 gattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtgacggttttactggccatctctacagagctcttactgacaagggaatccacac 18731698  T
Q  211 cttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 261  Q
    |||||||||||||  ||| || |||||||| |||||||||| |||||||||    
T  18731697 cttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcact 18731647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 57 - 261
Target Start/End: Complemental strand, 18724432 - 18724228
Alignment:
Q  57 tctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcg 156  Q
    |||||||||| ||||| || |||||||||||||||||||||||||||| || |  |||||||||||||||||||||||| || ||||||| |||||||||    
T  18724432 tctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcg 18724333  T
Q  157 ccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacacca 256  Q
      | |||||||| ||  |||||||||||||||||||||||||||||||| | |||||||||||||||  ||| || |||||||| |||||||||| ||||    
T  18724332 taacggttttactggtcatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaacca 18724233  T
Q  257 tcact 261  Q
    |||||    
T  18724232 tcact 18724228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 15 - 204
Target Start/End: Complemental strand, 17989437 - 17989250
Alignment:
Q  15 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcatt 114  Q
    |||||||||||| |||||||||||||| |  ||||  ||||||||||||||| ||||| || |||| ||||| ||  ||||||||||||| || ||||||    
T  17989437 attcatattctgcattctcaaactcttct--catcttatttctctcaattctcatggccatgcaattacctttctattcctcttcattttcctatgcatt 17989340  T
Q  115 cacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaat 204  Q
    || |||| | |||||||||| || || |||||| ||||||||  | ||||| ||||| |||||||  |||||||||| ||||||||||||    
T  17989339 cagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaat 17989250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 15 - 204
Target Start/End: Original strand, 18073552 - 18073739
Alignment:
Q  15 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcatt 114  Q
    |||||||||||| |||||||||||||| |  ||||  ||||||||||||||| ||||| || |||| ||||| ||  ||||||||||||| || ||||||    
T  18073552 attcatattctgcattctcaaactcttct--catcttatttctctcaattctcatggccatgcaattacctttctattcctcttcattttcctatgcatt 18073649  T
Q  115 cacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaat 204  Q
    || |||| | |||||||||| || || |||||| ||||||||  | ||||| ||||| |||||||  |||||||||| ||||||||||||    
T  18073650 cagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaat 18073739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 262
Target Start/End: Complemental strand, 5091237 - 5091109
Alignment:
Q  134 agttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttc 233  Q
    |||||||| ||||| ||||||||  | |||||||| |||||||||||  | |||||   || |||||||||  | ||||||||||||||||  || ||||    
T  5091237 agttttagaggcaccgacactcgttacggttttactggaaatctctatgaagctctacgtgtcaagggaattcacaccttcattgatgacagagagcttc 5091138  T
Q  234 aaagaggagatgaaatcacaccatcactt 262  Q
    |  |||||||  |||| ||||| ||||||    
T  5091137 agcgaggagaccaaataacaccgtcactt 5091109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 6e-37; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 33 - 255
Target Start/End: Complemental strand, 28164733 - 28164511
Alignment:
Q  33 caaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcattcacttaccaagtgttcct 132  Q
    ||||||||||| ||||||||||||| |||||||| ||||| |||| ||| | |||||| ||||||||| ||| || || |||||| ||||||||||||||    
T  28164733 caaactcttttctcatccaatttctgtcaattctcatggctatacgatcgcattcctcttcctcttcaatttcctatggattcacataccaagtgttcct 28164634  T
Q  133 cagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatctt 232  Q
    |||||||||||||| |||||||||  | ||||| || ||  ||||||| ||||| |||   |||||||||||  | || |||||||||||   |||||||    
T  28164633 cagttttaggggcagtgacactcgtgacggtttcactggccatctctataaggcccttgacgacaagggaattcacacattcattgatgattgtgatctt 28164534  T
Q  233 caaagaggagatgaaatcacacc 255  Q
     | |||||||| |||||||||||    
T  28164533 gagagaggagaagaaatcacacc 28164511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 57 - 261
Target Start/End: Complemental strand, 268704 - 268500
Alignment:
Q  57 tctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcg 156  Q
    ||||| |||| ||||| || |||||||||||||| ||||||||| | |  | || |||  | ||||| || |||||||  || || |||  |||||||||    
T  268704 tctcagttctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggatttgcctaccaggtcttcctcaacttcagaggcggtgacactcg 268605  T
Q  157 ccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacacca 256  Q
      | |||||||  ||  |||||||||||||||||||||||||||||||| | ||||||||||||||   ||| ||||||||||| |||||||||| ||||    
T  268604 tgagggttttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaacca 268505  T
Q  257 tcact 261  Q
    |||||    
T  268504 tcact 268500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 36 - 222
Target Start/End: Complemental strand, 28128042 - 28127862
Alignment:
Q  36 actcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcattcacttaccaagtgttcctcag 135  Q
    |||||||| ||||||||||| | |||||||| ||||| || ||||||| ||||||      |||| ||| || || |||||| |||||||||||||||||    
T  28128042 actcttttctcatccaatttttgtcaattctcatggctatgcaatcacattcctc------ttcaatttcctatggattcacataccaagtgttcctcag 28127949  T
Q  136 ttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatga 222  Q
     || ||||||| |||||||||  | ||||| || ||  ||||||||||||| |||  ||||||||||||| | || |||||||||||    
T  28127948 cttcaggggcagtgacactcgtgacggtttcactggccatctctacaaggccctttatgacaagggaatccacacattcattgatga 28127862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 15 - 204
Target Start/End: Original strand, 59360 - 59547
Alignment:
Q  15 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggcaatacaatcaccttcctcatcctcttcattttgctctgcatt 114  Q
    |||||||||||| |||||||||||||| |  ||||  ||||||||||||||| ||||| || |||| ||||| ||  ||||||||||||| || ||||||    
T  59360 attcatattctgcattctcaaactcttct--catcttatttctctcaattctcatggccatgcaattacctttctattcctcttcattttcctatgcatt 59457  T
Q  115 cacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaat 204  Q
    || |||| | |||||||||| || || |||||| ||||||||  | ||||| ||||| |||||||  |||||||||| ||||||||||||    
T  59458 cagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaat 59547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 63; Significance: 2e-27; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 125 - 263
Target Start/End: Original strand, 34620 - 34758
Alignment:
Q  125 gtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgaca 224  Q
    |||||||| |||||||| || | |||||||||| |||||||||||| ||||||||| |  ||||||  | ||||||||||| | ||||||||||||||||    
T  34620 gtgttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatccacaccttcattgatgaca 34719  T
Q  225 atgatcttcaaagaggagatgaaatcacaccatcacttt 263  Q
      || |||||| ||||||||||||| |||||||||||||    
T  34720 gggagcttcaaggaggagatgaaataacaccatcacttt 34758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 263
Target Start/End: Original strand, 116658 - 116829
Alignment:
Q  92 tcctcttcattttgctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctctta 191  Q
    |||||||| |||| || || |||||| ||  | |||||||| |||||||| || | |||||||||  |||||||||| |||||||||||||| | ||||     
T  116658 tcctcttccttttcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatcttt 116757  T
Q  192 ctgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcacttt 263  Q
     |   ||| ||||    ||||||||||||||||| || |||||| |||| || ||||| ||||| |||||||    
T  116758 gtaggaagagaattcgtaccttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttt 116829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 263
Target Start/End: Original strand, 42864 - 42999
Alignment:
Q  128 ttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatg 227  Q
    ||||| |||||||| || | |||||||||  |||||||||| |||||||||||||| | ||||  | | ||||||||    ||||||||||||||||  |    
T  42864 ttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagag 42963  T
Q  228 atcttcaaagaggagatgaaatcacaccatcacttt 263  Q
    | |||| | |||| ||  |||| |||||||||||||    
T  42964 aacttccaggaggtgacaaaataacaccatcacttt 42999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 263
Target Start/End: Original strand, 27343 - 27481
Alignment:
Q  125 gtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgaca 224  Q
    |||||||| |||||||| || | |||||||||  |||||||||| |||||||||||||  | ||||  | | ||||||||  | || ||| ||||||| |    
T  27343 gtgttccttagttttagaggtattgacactcgttatggttttactggaaatctctacagtgatctttgtaagaagggaattcacacattctttgatgata 27442  T
Q  225 atgatcttcaaagaggagatgaaatcacaccatcacttt 263  Q
      || |||||| |||| |||||||| ||| |||||||||    
T  27443 gagagcttcaaggaggtgatgaaataacatcatcacttt 27481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 68 - 261
Target Start/End: Complemental strand, 29274119 - 29273926
Alignment:
Q  68 atggcaatacaatcaccttcctcatcctcttcattttgctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccatggtttta 167  Q
    ||||| || |||||||||||||| ||||||||| | |  | || |||||||||||| || |||||||  ||||| |||  |||||||||  | |||||||    
T  29274119 atggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggtttta 29274020  T
Q  168 ccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 261  Q
      ||  ||||||||||| |||||||||||||||||||| | ||||||||||||||   ||| ||||||||||| |||||||||| | |||||||    
T  29274019 ttggccatctctacaagactcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaatcatcact 29273926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 263
Target Start/End: Original strand, 31903733 - 31903884
Alignment:
Q  112 attcacttaccaagtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaacc 211  Q
    |||||| ||| | ||||||||||| ||||| |||   ||||||||| |||||||||| |||||||||||||| ||||||  ||| ||||||||| | |||    
T  31903733 attcacctacgatgtgttcctcagctttagaggcttagacactcgctatggttttactggaaatctctacaaagctctttatgataagggaatccacacc 31903832  T
Q  212 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcacttt 263  Q
    || ||||| ||  | || |||||||||||| |||||||||||||||||||||    
T  31903833 tttattgacgatgaagaacttcaaagaggacatgaaatcacaccatcacttt 31903884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 148 - 263
Target Start/End: Complemental strand, 58551 - 58436
Alignment:
Q  148 tgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaa 247  Q
    |||||||||| |||||||||| |||||||||||||  ||||||  |||||||||||||  ||||||||| |||||||  || |||||| |||| || |||    
T  58551 tgacactcgctatggttttactggaaatctctacagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgacgaa 58452  T
Q  248 atcacaccatcacttt 263  Q
    || |||||||||||||    
T  58451 ataacaccatcacttt 58436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 125 - 255
Target Start/End: Complemental strand, 17993976 - 17993846
Alignment:
Q  125 gtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgaca 224  Q
    |||||| | ||||| ||||| || || |||||  ||||||| ||||| |||||||| || |||||| |||||||||||||   ||||||||| |||||||    
T  17993976 gtgttcattagtttcaggggtaccgatactcgatatggtttcaccggtaatctctataaagctctttctgacaagggaattcgaaccttcatcgatgaca 17993877  T
Q  225 atgatcttcaaagaggagatgaaatcacacc 255  Q
    | || ||||| ||||| ||||||||||||||    
T  17993876 aagagcttcagagaggtgatgaaatcacacc 17993846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 3279592 - 3279638
Alignment:
Q  134 agttttaggggcactgacactcgccatggttttaccggaaatctcta 180  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||    
T  3279592 agttttaggggcactgacactcgctatggttttactggaaatctcta 3279638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0781 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0781
Description:

Target: scaffold0781; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 143 - 91
Alignment:
Q  125 gtgttcctcagttttaggggcactgacactcgccatggttttaccggaaatct 177  Q
    |||||||| ||||| || ||  ||||||||||||||||||||||||| |||||    
T  143 gtgttcctaagtttcagaggagctgacactcgccatggttttaccggcaatct 91  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University