View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2993_low_19 (Length: 250)
Name: NF2993_low_19
Description: NF2993
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2993_low_19 |
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Alignment Details
Target: chr1 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 26037098 - 26037342
Alignment:
| Q |
1 |
cttcgtccagaatcaatatagaagaattttgatagaaagcccttgcaatagccagtctgtaagtttgagaaaggaagtaacatatcaaatttgaatgata |
100 |
Q |
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| T |
26037098 |
cttcgtccagaatcaatatagaagaattttgatagaaagcccttgcaatagccagtctgtaagtttgagaaaggaagtaacatatcaaatttgaatgata |
26037197 |
T |
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| Q |
101 |
tttcataaatattcaaaacattaaatctgttcttcacatcaatcatagctaccaaaagctctttccaaacagaacaaaattagctgttaattcatggttt |
200 |
Q |
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|||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26037198 |
tttcataaatattcaaaacattaaatttgtccttcacatcaatcatagctaccaaaagctctttccaaacagaacaaaattagctgttaattcatggttt |
26037297 |
T |
|
| Q |
201 |
atagaacagaatgaaatttgaatttgaaaatttacctttgcttct |
245 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26037298 |
atagaacagaatgaaatttgaatttgaaaatttacctttgcttct |
26037342 |
T |
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