View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2993_low_28 (Length: 205)
Name: NF2993_low_28
Description: NF2993
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2993_low_28 |
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Alignment Details
Target: chr8 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 3051794 - 3051967
Alignment:
| Q |
14 |
aagaatattttgttttcatttagtaaagttaaattctaactcaaaagaatctcagaaaatcaatgctaatgtgagtatttggagagactaaaaacttact |
113 |
Q |
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| T |
3051794 |
aagaatattttgttttcatttagtaaagttaaattctaactcaaaagaatctcagaaaatcaatgctaatgtgagtatttggagagactaaaaacttact |
3051893 |
T |
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| Q |
114 |
cgtatcgaatctatgtaaccaaattcctctctttttactatgtttcaactttctaattttaactatcttagatt |
187 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3051894 |
cgtaccgaatctatgtaaccaaattcctctctttttactatgtttcaactttctaattttaactatcttagatt |
3051967 |
T |
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