View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2994R-Insertion-12 (Length: 426)
Name: NF2994R-Insertion-12
Description: NF2994R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2994R-Insertion-12 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 401; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 401; E-Value: 0
Query Start/End: Original strand, 6 - 426
Target Start/End: Complemental strand, 50898057 - 50897637
Alignment:
| Q |
6 |
tcaaaagaatcatgtaaacataacataatcaatagagtcatgtaaacatagttcaaccgacgagaacattgtattacgtctacatactacaagggttagt |
105 |
Q |
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| T |
50898057 |
tcaaaagaatcatgtaaacataacataatcaatagagtcatgtaaacatagttcaaccgacaagaacattgtattacgtctacatactacaagggttagt |
50897958 |
T |
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| Q |
106 |
attcgaacttaaattcctcatttattcaccttagaactcaaattcttggcttattcaccttggttgcacaaacaatgaataacttttggatataaaactt |
205 |
Q |
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| T |
50897957 |
attcgaacttaaattcctcatttattcaccttagaactcaaattcttggcttattcaccttggttgcacaaacaatgaataacttttggatataaaactt |
50897858 |
T |
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| Q |
206 |
ccaacatcttcaattttgttcggtggctgctcaatctcattagaggagactaggagttaagctaccaccattgattggcctgttacagtgaccttaacga |
305 |
Q |
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| T |
50897857 |
ccaacatcttcaattttgttaggtggctgctcaatctcattagaggagactaggagttaagctaccaccattgattggcctgctacagtgaccttaacga |
50897758 |
T |
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| Q |
306 |
atgttcgaaggctaccgtggatatacacaactatttagttaagtgttttaatattaaatatgtaattctctaattttctctacacactatccgctgcaca |
405 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
50897757 |
atgttcgaaggctaccgtggatatacacaactatttagttaagtgttttaagattaaatatgtaattctctaattttctctacacactatcagctgcaca |
50897658 |
T |
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| Q |
406 |
atctaaatagagttcctatgg |
426 |
Q |
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| T |
50897657 |
atctaaatagagttcctatgg |
50897637 |
T |
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