View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2994R-Insertion-6 (Length: 861)

Name: NF2994R-Insertion-6
Description: NF2994R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2994R-Insertion-6
NF2994R-Insertion-6
[»] chr3 (22 HSPs)
chr3 (9-836)||(14683019-14683844)
chr3 (9-841)||(7341337-7342166)
chr3 (9-549)||(7396083-7396621)
chr3 (69-822)||(10791956-10792703)
chr3 (9-549)||(13299332-13299873)
chr3 (9-549)||(13309990-13310531)
chr3 (69-549)||(10778707-10779185)
chr3 (53-549)||(11886989-11887477)
chr3 (91-331)||(10139701-10139942)
chr3 (91-331)||(10171068-10171309)
chr3 (116-274)||(12021453-12021611)
chr3 (133-274)||(12491915-12492056)
chr3 (138-274)||(13023872-13024007)
chr3 (138-272)||(12844571-12844704)
chr3 (146-279)||(43135592-43135725)
chr3 (146-272)||(132461-132587)
chr3 (500-631)||(10170794-10170923)
chr3 (724-822)||(10170595-10170693)
chr3 (207-273)||(1934709-1934775)
chr3 (133-180)||(22445013-22445060)
chr3 (535-577)||(132861-132903)
chr3 (535-580)||(12021859-12021905)
[»] chr7 (21 HSPs)
chr7 (9-836)||(14323578-14324407)
chr7 (9-549)||(14345771-14346312)
chr7 (9-549)||(14035741-14036282)
chr7 (9-550)||(18141665-18142201)
chr7 (9-550)||(18115097-18115633)
chr7 (9-549)||(44277540-44278079)
chr7 (24-331)||(18174752-18175057)
chr7 (9-241)||(18159967-18160197)
chr7 (116-303)||(15758528-15758715)
chr7 (91-298)||(1978174-1978381)
chr7 (116-274)||(11989376-11989534)
chr7 (146-279)||(40342863-40342995)
chr7 (138-279)||(18752644-18752782)
chr7 (146-279)||(10827806-10827940)
chr7 (146-279)||(11021598-11021732)
chr7 (167-279)||(24876397-24876509)
chr7 (146-196)||(10864187-10864237)
chr7 (535-577)||(10828208-10828250)
chr7 (535-565)||(10863863-10863893)
chr7 (535-577)||(11022000-11022042)
chr7 (535-577)||(13347015-13347057)
[»] scaffold0101 (2 HSPs)
scaffold0101 (9-838)||(46140-46966)
scaffold0101 (98-837)||(50867-51603)
[»] chr1 (24 HSPs)
chr1 (9-838)||(22085837-22086662)
chr1 (9-828)||(41368534-41369343)
chr1 (9-549)||(41383438-41383977)
chr1 (91-294)||(22809018-22809221)
chr1 (91-294)||(31845613-31845816)
chr1 (116-298)||(1528629-1528811)
chr1 (116-298)||(27561872-27562054)
chr1 (91-279)||(29305211-29305399)
chr1 (116-274)||(21310727-21310885)
chr1 (91-279)||(21137648-21137835)
chr1 (133-273)||(23511609-23511748)
chr1 (138-274)||(21076558-21076693)
chr1 (138-274)||(22684640-22684776)
chr1 (91-199)||(22794418-22794526)
chr1 (138-279)||(4229860-4230000)
chr1 (150-279)||(21168358-21168485)
chr1 (146-279)||(4361651-4361784)
chr1 (146-273)||(21550522-21550647)
chr1 (531-580)||(21310450-21310499)
chr1 (146-279)||(27902012-27902144)
chr1 (533-580)||(22685040-22685087)
chr1 (146-248)||(21382054-21382155)
chr1 (146-247)||(27131731-27131831)
chr1 (146-266)||(2603493-2603613)
[»] chr4 (21 HSPs)
chr4 (9-549)||(18108417-18108953)
chr4 (68-631)||(13277152-13277693)
chr4 (116-331)||(14556908-14557124)
chr4 (116-298)||(15153596-15153778)
chr4 (85-331)||(13292546-13292793)
chr4 (91-270)||(14714099-14714278)
chr4 (91-270)||(14775779-14775958)
chr4 (138-274)||(14022430-14022565)
chr4 (138-279)||(3077947-3078086)
chr4 (138-274)||(1658583-1658718)
chr4 (500-660)||(14557235-14557392)
chr4 (146-279)||(18567017-18567147)
chr4 (497-631)||(14714470-14714604)
chr4 (146-274)||(10267220-10267346)
chr4 (146-279)||(31079772-31079906)
chr4 (724-822)||(13277798-13277897)
chr4 (497-549)||(15154001-15154053)
chr4 (146-272)||(49526474-49526601)
chr4 (492-550)||(13292934-13292992)
chr4 (724-817)||(14557465-14557557)
chr4 (146-187)||(27812325-27812366)
[»] chr8 (18 HSPs)
chr8 (9-549)||(16667828-16668369)
chr8 (9-552)||(17425970-17426511)
chr8 (9-549)||(20193028-20193567)
chr8 (260-829)||(1734755-1735315)
chr8 (91-298)||(22351969-22352176)
chr8 (91-309)||(12821178-12821396)
chr8 (116-294)||(25388963-25389141)
chr8 (116-274)||(22064585-22064743)
chr8 (138-279)||(29708170-29708310)
chr8 (143-279)||(41438853-41438988)
chr8 (146-279)||(22698110-22698242)
chr8 (146-279)||(18735364-18735495)
chr8 (146-279)||(15337305-15337437)
chr8 (146-279)||(15426370-15426502)
chr8 (146-279)||(15517674-15517806)
chr8 (146-273)||(15911712-15911838)
chr8 (146-273)||(27818187-27818315)
chr8 (207-273)||(16777947-16778013)
[»] scaffold0740 (1 HSPs)
scaffold0740 (9-551)||(5351-5891)
[»] scaffold0130 (4 HSPs)
scaffold0130 (9-547)||(28401-28921)
scaffold0130 (9-331)||(39796-40117)
scaffold0130 (91-294)||(29295-29498)
scaffold0130 (497-577)||(29675-29755)
[»] scaffold0323 (1 HSPs)
scaffold0323 (24-789)||(4015-4764)
[»] scaffold0253 (1 HSPs)
scaffold0253 (9-367)||(15200-15554)
[»] chr2 (42 HSPs)
chr2 (252-688)||(24953914-24954360)
chr2 (192-549)||(24967260-24967609)
chr2 (24-331)||(22648514-22648819)
chr2 (9-331)||(23190127-23190447)
chr2 (9-331)||(23203743-23204063)
chr2 (9-331)||(23611382-23611702)
chr2 (9-331)||(23614987-23615307)
chr2 (157-331)||(22633765-22633939)
chr2 (9-164)||(24963771-24963926)
chr2 (91-294)||(24896611-24896814)
chr2 (686-841)||(24950565-24950719)
chr2 (91-274)||(39227406-39227589)
chr2 (491-822)||(23190561-23190890)
chr2 (491-822)||(23611816-23612145)
chr2 (145-279)||(16664690-16664823)
chr2 (133-279)||(31817908-31818053)
chr2 (146-279)||(22880937-22881069)
chr2 (491-822)||(22648010-22648339)
chr2 (491-822)||(23615464-23615800)
chr2 (9-162)||(22635243-22635394)
chr2 (146-274)||(22593739-22593866)
chr2 (146-273)||(20524136-20524262)
chr2 (146-272)||(34827636-34827761)
chr2 (149-279)||(23870534-23870663)
chr2 (146-279)||(37130394-37130527)
chr2 (146-279)||(28567731-28567862)
chr2 (146-279)||(23815003-23815137)
chr2 (146-273)||(21904983-21905109)
chr2 (146-279)||(23803373-23803509)
chr2 (173-279)||(21256506-21256611)
chr2 (149-272)||(22708169-22708291)
chr2 (146-201)||(23829851-23829906)
chr2 (146-273)||(23995672-23995797)
chr2 (207-273)||(30051973-30052039)
chr2 (207-273)||(30143017-30143083)
chr2 (208-273)||(20281220-20281285)
chr2 (146-273)||(10480411-10480538)
chr2 (146-273)||(25349286-25349415)
chr2 (146-273)||(20442213-20442338)
chr2 (535-566)||(23803778-23803809)
chr2 (207-273)||(30089988-30090054)
chr2 (207-273)||(30126593-30126659)
[»] chr6 (20 HSPs)
chr6 (9-233)||(16309973-16310197)
chr6 (9-331)||(23431851-23432171)
chr6 (9-331)||(23490893-23491211)
chr6 (9-331)||(23496491-23496809)
chr6 (91-298)||(16209767-16209974)
chr6 (116-303)||(1557660-1557847)
chr6 (116-331)||(19025367-19025583)
chr6 (116-331)||(19038410-19038626)
chr6 (91-298)||(30755481-30755688)
chr6 (91-279)||(19405738-19405926)
chr6 (138-279)||(11794094-11794234)
chr6 (150-279)||(18258120-18258248)
chr6 (725-822)||(23496009-23496106)
chr6 (492-660)||(19025721-19025887)
chr6 (724-822)||(19025959-19026057)
chr6 (146-247)||(26460597-26460697)
chr6 (146-279)||(16597257-16597389)
chr6 (535-577)||(26461014-26461056)
chr6 (146-242)||(19272323-19272417)
chr6 (535-577)||(16597669-16597711)
[»] scaffold0022 (1 HSPs)
scaffold0022 (85-631)||(58159-58684)
[»] scaffold0108 (2 HSPs)
scaffold0108 (118-774)||(43712-44353)
scaffold0108 (118-549)||(22758-23177)
[»] scaffold0040 (3 HSPs)
scaffold0040 (91-331)||(41272-41512)
scaffold0040 (491-660)||(40965-41132)
scaffold0040 (724-822)||(40791-40889)
[»] scaffold0270 (3 HSPs)
scaffold0270 (90-331)||(8031-8274)
scaffold0270 (90-331)||(15161-15404)
scaffold0270 (497-660)||(15555-15715)
[»] scaffold0064 (2 HSPs)
scaffold0064 (118-331)||(43100-43313)
scaffold0064 (455-549)||(43450-43545)
[»] chr5 (14 HSPs)
chr5 (91-298)||(20506271-20506478)
chr5 (91-298)||(21982565-21982772)
chr5 (91-298)||(21530278-21530485)
chr5 (91-298)||(26274049-26274256)
chr5 (151-298)||(21504611-21504758)
chr5 (146-279)||(20024462-20024593)
chr5 (91-190)||(21507876-21507975)
chr5 (146-279)||(18156137-18156269)
chr5 (146-274)||(40932877-40933004)
chr5 (146-268)||(10624309-10624430)
chr5 (497-568)||(21530025-21530096)
chr5 (146-232)||(16832149-16832234)
chr5 (724-822)||(21529767-21529864)
chr5 (207-271)||(19212377-19212441)
[»] scaffold0282 (1 HSPs)
scaffold0282 (91-294)||(8713-8916)
[»] scaffold0026 (4 HSPs)
scaffold0026 (91-294)||(118321-118524)
scaffold0026 (91-294)||(142172-142374)
scaffold0026 (497-616)||(118640-118759)
scaffold0026 (722-815)||(118869-118961)
[»] scaffold0023 (8 HSPs)
scaffold0023 (91-298)||(62115-62322)
scaffold0023 (91-298)||(84976-85183)
scaffold0023 (91-289)||(71302-71500)
scaffold0023 (91-279)||(6611-6799)
scaffold0023 (91-279)||(22608-22796)
scaffold0023 (116-198)||(116476-116558)
scaffold0023 (531-616)||(84706-84791)
scaffold0023 (531-580)||(22334-22382)
[»] scaffold0001 (8 HSPs)
scaffold0001 (116-298)||(25068-25250)
scaffold0001 (116-298)||(28566-28748)
scaffold0001 (91-298)||(115300-115507)
scaffold0001 (91-298)||(129852-130058)
scaffold0001 (91-294)||(390056-390259)
scaffold0001 (497-580)||(389803-389886)
scaffold0001 (509-571)||(115696-115758)
scaffold0001 (725-822)||(115915-116011)
[»] scaffold0304 (2 HSPs)
scaffold0304 (85-289)||(5727-5932)
scaffold0304 (497-660)||(6127-6288)
[»] scaffold0019 (4 HSPs)
scaffold0019 (91-294)||(151355-151558)
scaffold0019 (91-220)||(161700-161829)
scaffold0019 (212-294)||(162035-162117)
scaffold0019 (531-580)||(151769-151818)
[»] scaffold0081 (3 HSPs)
scaffold0081 (116-296)||(44240-44420)
scaffold0081 (497-571)||(44598-44672)
scaffold0081 (724-822)||(44829-44926)
[»] scaffold0241 (2 HSPs)
scaffold0241 (91-298)||(25051-25258)
scaffold0241 (497-571)||(24800-24875)
[»] scaffold0080 (1 HSPs)
scaffold0080 (91-298)||(2402-2609)
[»] scaffold0021 (2 HSPs)
scaffold0021 (91-298)||(18453-18660)
scaffold0021 (91-298)||(27984-28191)
[»] scaffold0516 (3 HSPs)
scaffold0516 (9-186)||(11145-11322)
scaffold0516 (428-559)||(11381-11511)
scaffold0516 (342-411)||(11316-11384)
[»] scaffold0358 (1 HSPs)
scaffold0358 (91-294)||(15689-15892)
[»] scaffold0193 (3 HSPs)
scaffold0193 (91-298)||(26731-26938)
scaffold0193 (724-818)||(27343-27436)
scaffold0193 (497-571)||(27113-27187)
[»] scaffold0005 (1 HSPs)
scaffold0005 (91-270)||(63772-63951)
[»] scaffold0509 (2 HSPs)
scaffold0509 (91-279)||(1174-1362)
scaffold0509 (91-279)||(7602-7790)
[»] scaffold0046 (2 HSPs)
scaffold0046 (91-279)||(30579-30767)
scaffold0046 (531-580)||(30300-30349)
[»] scaffold0051 (1 HSPs)
scaffold0051 (595-822)||(79249-79474)
[»] scaffold0060 (1 HSPs)
scaffold0060 (91-279)||(32065-32253)
[»] scaffold0053 (1 HSPs)
scaffold0053 (138-279)||(45235-45376)
[»] scaffold0423 (1 HSPs)
scaffold0423 (166-294)||(1706-1834)
[»] scaffold0239 (2 HSPs)
scaffold0239 (138-279)||(16995-17136)
scaffold0239 (533-580)||(17392-17440)
[»] scaffold0003 (1 HSPs)
scaffold0003 (133-274)||(33335-33475)
[»] scaffold0216 (2 HSPs)
scaffold0216 (138-274)||(19972-20108)
scaffold0216 (533-580)||(20369-20416)
[»] scaffold0107 (3 HSPs)
scaffold0107 (183-303)||(29088-29207)
scaffold0107 (116-186)||(32201-32271)
scaffold0107 (492-580)||(28834-28922)
[»] scaffold0362 (1 HSPs)
scaffold0362 (138-274)||(11293-11429)
[»] scaffold0059 (2 HSPs)
scaffold0059 (133-279)||(68105-68250)
scaffold0059 (149-279)||(76226-76355)
[»] scaffold0013 (2 HSPs)
scaffold0013 (133-274)||(129156-129296)
scaffold0013 (138-279)||(107406-107547)
[»] scaffold0016 (3 HSPs)
scaffold0016 (143-279)||(200111-200245)
scaffold0016 (9-129)||(127625-127743)
scaffold0016 (9-101)||(120787-120877)
[»] scaffold0168 (1 HSPs)
scaffold0168 (146-279)||(1415-1547)
[»] scaffold0077 (1 HSPs)
scaffold0077 (146-272)||(12321-12446)
[»] scaffold0012 (1 HSPs)
scaffold0012 (146-274)||(250092-250219)
[»] scaffold0770 (1 HSPs)
scaffold0770 (146-279)||(3711-3842)
[»] scaffold0100 (1 HSPs)
scaffold0100 (146-279)||(8974-9105)
[»] scaffold0029 (1 HSPs)
scaffold0029 (146-279)||(102015-102146)
[»] scaffold0151 (1 HSPs)
scaffold0151 (146-274)||(14155-14281)
[»] scaffold1701 (1 HSPs)
scaffold1701 (774-836)||(1395-1457)
[»] scaffold0063 (1 HSPs)
scaffold0063 (133-279)||(70628-70773)
[»] scaffold0190 (1 HSPs)
scaffold0190 (138-251)||(7441-7552)
[»] scaffold0480 (1 HSPs)
scaffold0480 (152-279)||(3685-3811)
[»] scaffold0504 (1 HSPs)
scaffold0504 (207-273)||(693-759)
[»] scaffold0096 (1 HSPs)
scaffold0096 (138-196)||(36396-36454)
[»] scaffold0297 (1 HSPs)
scaffold0297 (146-273)||(8791-8917)
[»] scaffold0035 (1 HSPs)
scaffold0035 (210-273)||(25825-25888)
[»] scaffold1496 (1 HSPs)
scaffold1496 (207-273)||(1396-1462)
[»] scaffold0417 (1 HSPs)
scaffold0417 (146-232)||(1336-1421)
[»] scaffold0126 (1 HSPs)
scaffold0126 (207-274)||(31293-31360)
[»] scaffold0319 (1 HSPs)
scaffold0319 (106-140)||(11669-11703)
[»] scaffold0014 (1 HSPs)
scaffold0014 (535-580)||(7102-7147)


Alignment Details
Target: chr3 (Bit Score: 610; Significance: 0; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 610; E-Value: 0
Query Start/End: Original strand, 9 - 836
Target Start/End: Original strand, 14683019 - 14683844
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||    
T  14683019 aatccgtgttgaattcaatcgaagttctgtaaataatagcaatgaaaagaagtacttggaaaagacttaataaaacaagacttaaattgcaaaagtgttt 14683118  T
Q  109 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtatt 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14683119 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtatt 14683218  T
Q  209 gagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 308  Q
    ||||||||||||||||||||||||| ||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14683219 gagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 14683318  T
Q  309 aatcaaaa-tcgaaactagccgttcacaaactagtcgtttgctaaccgcttggtcttatcaataaaacctgaagagcgcgtcgacaacttctttcatccg 407  Q
    | |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||     |||||||||||||||||||||||| |||||    
T  14683319 attcaaaaatcgaaactagccgttcacaaactagccgtttgctaaccgcttggtcttatccacaa-----gaagagcgcgtcgacaacttcttttatccg 14683413  T
Q  408 tcgaactaaaaacaacgtcttcgattcctgctgaagtacacttgtatttttcgatggatttccttcacaaagctacgccccatttttacgtcaaaccctt 507  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||  |||    
T  14683414 tcgaactaaaaacaacttcttcaattcctgctgaagtacacttgtatttttcgatggatttctttcacaaagctacgccccatttttaggtcaaatgctt 14683513  T
Q  508 gactgcattaaatgctcatgttctcacaaatattggctaacaaattgccccccagaaacgttattttcgaactttctctcca---tttaggagaaacttg 604  Q
    |||||||||||||| |||| |||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||     |||||||||||||||    
T  14683514 gactgcattaaatgatcatattctcacaaaaattggctaacaaattgccgcccagaaacgttatgttcgaactttctctctcgattttaggagaaacttg 14683613  T
Q  605 acgtttctgaaattttttcgataaagtgcaattcctcagcatgacatcattcttttgacaacgggatatttcaaaaggtgcagaaccgtcttcataagga 704  Q
    ||||||||||||  ||  |||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||  || ||||| ||||||||||||    
T  14683614 acgtttctgaaaagttc-cgatgaagtgcaattcctcagcatgacctcattcttttgacgacgggatatttcaaaagacgcggaaccatcttcataagga 14683712  T
Q  705 cttagtgggccataccgtcattgggaaccatcaaaaaacaacttttccatgcaatgattgacatctgtccagtatcaaaagctatgtatggccctgagtc 804  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||| |||||||||    
T  14683713 cttagtgggtcataccgtcattgggaaccatcaaaaaacaactgttccatgcgatgattgacatctgtccagtatcaaaagctatatatgaccctgagtc 14683812  T
Q  805 atacttttactcttacttcatttctctttagt 836  Q
    ||||||||||||||||||||||||||||||||    
T  14683813 atacttttactcttacttcatttctctttagt 14683844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 512; E-Value: 0
Query Start/End: Original strand, 9 - 841
Target Start/End: Original strand, 7341337 - 7342166
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    ||||||||||| ||||||||||||||||||||||||     |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  7341337 aatccgtgttgaattcaatcgaagttctgtaaataa-----atgaaaagcagtactttgaaaagacttagtaaaacaagacttaaattgcaaaagtgctt 7341431  T
Q  109 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtatt 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7341432 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtatt 7341531  T
Q  209 gagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 308  Q
    ||| ||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  7341532 gagcgtaagtttttagtatgattgaattgtgacctttttttcctaagaaaaactactatttatacagatagtcctataactacctaattgcatcctttcg 7341631  T
Q  309 aatcaaaatcgaaactagccg-ttcac-aaactagtcgtttgctaaccgcttggtcttatcaataaaacctgaagagcgcgtcgacaacttctttcatcc 406  Q
    | ||||||||||||||||||| ||||| ||||||| ||||||||||| |||||| ||||||  | | |||| ||||||||||||||||||||||||||||    
T  7341632 attcaaaatcgaaactagccgtttcacaaaactagccgtttgctaactgcttggccttatccgtgagacctaaagagcgcgtcgacaacttctttcatcc 7341731  T
Q  407 gtcgaactaaaaacaacgtcttcgattcctgctgaagtacacttgtatttttcgatggatttccttcacaaagctacgccccatttttacgtcaaa-ccc 505  Q
    ||||||||| |||||| || ||||||||||||||||||||| |||||||||||||||||||   ||| |||| || |||||||| |||  |||||| |||    
T  7341732 gtcgaactagaaacaatgtattcgattcctgctgaagtacatttgtatttttcgatggattcttttcccaaaacttcgccccatctttcggtcaaacccc 7341831  T
Q  506 ttgactgcattaaatgctcatgttctcacaaatattggctaacaaattgccccccagaaacgttattttcgaactttc--tctcca-tttaggagaaact 602  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| || ||||||||  |||| | |||||||||||||    
T  7341832 ttgactgcattaaatgctcaaattctcacaaatattggctaacaaattgccccccagaaacgttatgtttgaactttctttctcgattttaggagaaact 7341931  T
Q  603 tgacgtttctgaaattttttcgataaagtgcaattcctcagcatgacatcattcttttgacaacgggatatttc-aaaaggtgcagaaccgtcttcataa 701  Q
    ||||||||||||||  |    | | |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||    
T  7341932 tgacgtttctgaaaagt----ggtgaagtgcaattcctcagcatgacatcactcttttgacaacgggatatttcaaaaaggtgtagaaccgtcttcataa 7342027  T
Q  702 ggacttagtgggccataccgtcattgggaaccatcaaaaaacaacttttccatgcaatgattgacatctgtccagtatcaaaagctatgtatggccctga 801  Q
     |||||||||||||||||||||||||||||| ||| |||||||||  |||||||| |||||||||||||||||| ||||||||||||| |||| ||||||    
T  7342028 agacttagtgggccataccgtcattgggaactatc-aaaaacaaccgttccatgcgatgattgacatctgtccaatatcaaaagctatatatgaccctga 7342126  T
Q  802 gtcatacttttactcttacttcatttctctttagtatatt 841  Q
    |||||| ||||||| |||||||  ||||| ||||| ||||    
T  7342127 gtcatatttttacttttacttcgcttctccttagtttatt 7342166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 9 - 549
Target Start/End: Original strand, 7396083 - 7396621
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    ||||||||||| ||||||||||||||||||||||||     |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7396083 aatccgtgttgaattcaatcgaagttctgtaaataa-----atgaaaagaagtactttgaaaagacttagtaaaacaagacttaaattgcaaaagtgttt 7396177  T
Q  109 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtatt 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7396178 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtatt 7396277  T
Q  209 gagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 308  Q
    ||| ||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  7396278 gagcgtaagtttttagtatgattgaattgtgacctttttttcctaagaaaaactactatttatacagatagtcctataactacctaattgcatcctttcg 7396377  T
Q  309 aatcaaaatcgaaactagccg-ttcac-aaactagtcgtttgctaaccgcttggtcttatcaataaaacctgaagagcgcgtcgacaacttctttcatcc 406  Q
    | ||||||||||||||||||| ||||| ||||||| ||||||||||| |||||| ||||||  | | |||| ||||||||||||||||||||||||||||    
T  7396378 attcaaaatcgaaactagccgtttcacaaaactagccgtttgctaactgcttggccttatccgtgagacctaaagagcgcgtcgacaacttctttcatcc 7396477  T
Q  407 gtcgaactaaaaacaacgtcttcgattcctgctgaagtacacttgtatttttcgatggatttccttcacaaagctacgccccatttttacgtcaaa-ccc 505  Q
    ||||||||| |||||| || ||||||||||||||||||||| |||||||||||||||||||   ||| |||| || |||||||| |||  |||||| |||    
T  7396478 gtcgaactagaaacaatgtattcgattcctgctgaagtacatttgtatttttcgatggattcttttcccaaaacttcgccccatctttcggtcaaacccc 7396577  T
Q  506 ttgactgcattaaatgctcatgttctcacaaatattggctaaca 549  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  7396578 ttgactgcattaaatgctcatattctcacaaatattggctaaca 7396621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 69 - 822
Target Start/End: Complemental strand, 10792703 - 10791956
Alignment:
Q  69 aaagacttagtaaaataagacttaaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattg 168  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  10792703 aaagacttagtaaaacaagacttaaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatactttg 10792604  T
Q  169 caacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaag-aaaaactactat 267  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||  |||| ||||||||||||    
T  10792603 caacttgtaactcgtttgtcgcttccatacggacactattgagtgtaagtttttagtatgattgaattgtgacc-ctttttcttaagaaaaaactactat 10792505  T
Q  268 ttatacagatagtcctataactacctaatcacatcctttcgaatcaaaatcgaaactagccgttcacaaactagtcgtttgctaaccgcttggtcttatc 367  Q
    |||||||||||||||| |||||||||||||  || ||||||| || |||||||||||||||||||  ||||||| ||||||||||||||||||   ||||    
T  10792504 ttatacagatagtcctgtaactacctaatcctat-ctttcgattc-aaatcgaaactagccgttcgaaaactagccgtttgctaaccgcttggctctatc 10792407  T
Q  368 aataaaacctgaagagcgcgtcgacaacttctttcatccgtcgaactaaaaacaacgtcttcgattcctgctgaagtacacttgtat--ttttcgatgga 465  Q
     | ||||| || |  |||||||||||||||| || |  |||||||| ||||||    ||||||||||||||||||||| | || |||  ||||||||| |    
T  10792406 ca-aaaacttggaaggcgcgtcgacaacttcctttactcgtcgaac-aaaaacttattcttcgattcctgctgaagtagatttatatccttttcgatgaa 10792309  T
Q  466 tttccttcacaaagctacgccccatttttacgtcaaacccttgactgcattaaatgctcatgttctcacaaatattggctaacaaattgccccccagaaa 565  Q
    || | | |||||||||||||| |||||||  ||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||    
T  10792308 ttccatccacaaagctacgcctcattttttggtcaaacccttgactgcattaaatgatcatattttcacaaatattggctaacaaattgccccccagaaa 10792209  T
Q  566 cgttattttcgaactttctc----tccattt--aggagaaacttgacgtttctgaaattttttcgataaagtgcaattcctcagcatgacatcattcttt 659  Q
    |||||| |||||||||||||    || ||||  |||||||||||||||||||||||        || ||  || ||||||| ||||||||||||||||||    
T  10792208 cgttatgttcgaactttctcttcttcgattttcaggagaaacttgacgtttctgaa--------gaaaacatgtaattccttagcatgacatcattcttt 10792117  T
Q  660 tgacaacgggatatttcaaaaggtgcagaaccgtcttcataaggacttagtgggccataccgtcattgggaaccatcaaaaaacaacttttccatgcaat 759  Q
    ||  || |||||| |  |||| ||| ||||||||| |||||| ||||||||||||||||||| |||| |||| |||| ||||||||||  |||| || ||    
T  10792116 tggaaatgggata-tcaaaaaagtgtagaaccgtcatcataaagacttagtgggccataccgccatttggaatcatc-aaaaacaactgctccacgcgat 10792019  T
Q  760 gattgacatctgtccagtatcaaaagctatgtatggccctgagtcatacttttactcttactt 822  Q
    |||||||||||||||||||||||||| ||| |||| |   ||||||||||||| |||||||||    
T  10792018 gattgacatctgtccagtatcaaaagttatatatgactgcgagtcatacttttgctcttactt 10791956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 9 - 549
Target Start/End: Original strand, 13299332 - 13299873
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaag-aagtactttgaaaagacttagtaaaat-aagacttaaattgcaaaa-gtg 105  Q
    ||||||||||| || |||||||| ||||||| ||||| ||||| ||||| ||||||||||||| ||||||||||||  |||||||||||||||||| |||    
T  13299332 aatccgtgttgaatccaatcgaaattctgtagataatgacaataaaaaggaagtactttgaaaggacttagtaaaaacaagacttaaattgcaaaaagtg 13299431  T
Q  106 tttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagt 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||| |||||||||||||||||||||||    
T  13299432 tttaaaagattgtattgaatttgtaaagacttaatgaaagttggtgcacatattcatactttgcaacttgtgactcatttgtcgcttccatacggacagt 13299531  T
Q  206 attgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctt 305  Q
    |||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |    
T  13299532 attgagtgtaagtttttagtatgattgaattgtgacccctttttcctaagaaaaactactatttatacagatagtcctataactacctaatcatatccgt 13299631  T
Q  306 tcgaatcaaaatcgaaactagccgttcacaaactagtcgtttgctaaccgcttggtcttatcaataaaacctgaagagcgcgtcgacaacttctttcatc 405  Q
    |||| |||||||||||||||||||||   ||||||| ||||||||||| ||||| ||||||| | |||| |||||| |||| |||| |||||| || |||    
T  13299632 tcgattcaaaatcgaaactagccgtt-tgaaactagccgtttgctaactgcttgatcttatccaaaaaatctgaag-gcgcttcgataacttcctttatc 13299729  T
Q  406 cgtcgaactaaaaacaacgtcttcgattcctgctgaa-gtacacttgtatttttcgatggatttccttcacaaagctacgcccca-tttttacgtcaaac 503  Q
    | ||||||| |||||  | ||||||||||| ||| || ||| || | |||||||||||||| ||| |||||||||||| | || | |||||| |||||||    
T  13299730 catcgaact-aaaacggcttcttcgattcccgctaaaggtatacatatatttttcgatgga-ttctttcacaaagctaagtccaactttttaggtcaaac 13299827  T
Q  504 ccttgactgcattaaatgctcatgttctcacaaatattggctaaca 549  Q
    |||||||||||||||||| |  | ||||||||||||| ||||||||    
T  13299828 ccttgactgcattaaatgatactattctcacaaatatcggctaaca 13299873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 9 - 549
Target Start/End: Original strand, 13309990 - 13310531
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaag-aagtactttgaaaagacttagtaaaat-aagacttaaattgcaaaa-gtg 105  Q
    ||||||||||| || |||||||| ||||||| ||||| ||||| ||||| ||||||||||||| ||||||||||||  |||||||||||||||||| |||    
T  13309990 aatccgtgttgaatccaatcgaaattctgtagataatgacaataaaaaggaagtactttgaaaggacttagtaaaaacaagacttaaattgcaaaaagtg 13310089  T
Q  106 tttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagt 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||| |||||||||||||||||||||||    
T  13310090 tttaaaagattgtattgaatttgtaaagacttaatgaaagttggtgcacatattcatactttgcaacttgtgactcatttgtcgcttccatacggacagt 13310189  T
Q  206 attgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctt 305  Q
    |||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |    
T  13310190 attgagtgtaagtttttagtatgattgaattgtgacccctttttcctaagaaaaactactatttatacagatagtcctataactacctaatcatatccgt 13310289  T
Q  306 tcgaatcaaaatcgaaactagccgttcacaaactagtcgtttgctaaccgcttggtcttatcaataaaacctgaagagcgcgtcgacaacttctttcatc 405  Q
    |||| |||||||||||||||||||||   ||||||| ||||||||||| ||||| ||||||| | |||| |||||| |||| |||| |||||| || |||    
T  13310290 tcgattcaaaatcgaaactagccgtt-tgaaactagccgtttgctaactgcttgatcttatccaaaaaatctgaag-gcgcttcgataacttcctttatc 13310387  T
Q  406 cgtcgaactaaaaacaacgtcttcgattcctgctgaa-gtacacttgtatttttcgatggatttccttcacaaagctacgcccca-tttttacgtcaaac 503  Q
    | ||||||| |||||  | ||||||||||| ||| || ||| || | |||||||||||||| ||| |||||||||||| | || | |||||| |||||||    
T  13310388 catcgaact-aaaacggcttcttcgattcccgctaaaggtatacatatatttttcgatgga-ttctttcacaaagctaagtccaactttttaggtcaaac 13310485  T
Q  504 ccttgactgcattaaatgctcatgttctcacaaatattggctaaca 549  Q
    ||||||| |||||||||| |  | ||||||||||||| ||||||||    
T  13310486 ccttgacagcattaaatgatactattctcacaaatatcggctaaca 13310531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 69 - 549
Target Start/End: Complemental strand, 10779185 - 10778707
Alignment:
Q  69 aaagacttagtaaaataagacttaaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattg 168  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||    
T  10779185 aaagacttagtaaaacaagacttaaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaaggaaagttggtacacatattcatactttg 10779086  T
Q  169 caacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaag-aaaaactactat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||  |||| ||||||||||||    
T  10779085 caacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacc-ctttttcttaagaaaaaactactat 10778987  T
Q  268 ttatacagatagtcctataactacctaatcacatcctttcgaatcaaaatcgaaactagccgttcacaaactagtcgtttgctaaccgcttggtcttatc 367  Q
    |||||||||||||||| |||||||||||||  || ||||||| || |||||||||||||||||||  ||||||| ||||||||||||||||||   ||||    
T  10778986 ttatacagatagtcctgtaactacctaatcctat-ctttcgattc-aaatcgaaactagccgttcgaaaactagccgtttgctaaccgcttggctctatc 10778889  T
Q  368 aataaaacctgaagagcgcgtcgacaacttctttcatccgtcgaactaaaaacaacgtcttcgattcctgctgaagtacacttgtat--ttttcgatgga 465  Q
     | ||||| || |  |||||||||||||||| || |  ||| |||| ||||||    ||||||||||||||||||||| | || |||  ||||||||| |    
T  10778888 ca-aaaacttggaaggcgcgtcgacaacttcctttactcgttgaac-aaaaacttattcttcgattcctgctgaagtagatttatatccttttcgatgaa 10778791  T
Q  466 tttccttcacaaagctacgccccatttttacgtcaaacccttgactgcattaaatgctcatgttctcacaaatattggctaaca 549  Q
    || | | |||||||||||||| |||||||  ||||||||||||||||||||||||| |||| || |||||||||||||||||||    
T  10778790 ttccatccacaaagctacgcctcattttttggtcaaacccttgactgcattaaatgatcatattttcacaaatattggctaaca 10778707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 53 - 549
Target Start/End: Complemental strand, 11887477 - 11886989
Alignment:
Q  53 aaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtac 152  Q
    |||||||||||||||||| |||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11887477 aaaagaagtactttgaaa-gacttaataaaacaagacttaaattgtaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtac 11887379  T
Q  153 acatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttct 252  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||| ||    
T  11887378 acatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagttttaagtatgattgaattgtgacc-ctttttcct 11887280  T
Q  253 aag-aaaaactactatttatacagatagtcctataactacctaatcacatcctttcgaatcaaaatcgaaactagccgttcacaaactagtcgtttgcta 351  Q
    ||| |||||||||||||||||||||||||||||||||||||||| || ||||||   |||  ||||||| |||||||||||  ||||||| |||||||||    
T  11887279 aagaaaaaactactatttatacagatagtcctataactacctaaacatatcctt--caattcaaatcgagactagccgttcgaaaactagccgtttgcta 11887182  T
Q  352 accgcttggtcttatcaataaaacctgaagagcgcgtcgacaacttctttcatccgtcgaactaaaaacaacgtcttcgattcctgctgaagtacacttg 451  Q
    |||||||||  ||||| | ||||| || |  |||||||||||||||| || | | |||||   ||||||    ||||||||||||||||||||| | |||    
T  11887181 accgcttggctttatcca-aaaacttggaaggcgcgtcgacaacttccttaacctgtcga---aaaaacctattcttcgattcctgctgaagtagatttg 11887086  T
Q  452 tatttttcgatggatttccttcacaaagctacgccccatttttacgtcaaacccttgactgcattaaatgctcatgttctcacaaatattggctaaca 549  Q
    || ||||||||| ||| | | |  ||||||||||||||| |||| ||||||||||||||||||||||||| | || || |||||||||||||||||||    
T  11887085 ta-ttttcgatgaattccatccctaaagctacgccccatctttaggtcaaacccttgactgcattaaatgattatattttcacaaatattggctaaca 11886989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 91 - 331
Target Start/End: Complemental strand, 10139942 - 10139701
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    ||||||||||| |||||||||  | ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||    
T  10139942 taaattgcaaaggtgtttaaagaactgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgc 10139843  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataacta 290  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||||| |||||||||||||||    
T  10139842 ttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatacaaatagtcctataacta 10139743  T
Q  291 cctaatcacatcctttcga-atcaaaatcgaaactagccgtt 331  Q
    | |||||| |||  |||||  |||||||||||||||||||||    
T  10139742 cttaatcatatctgttcgatttcaaaatcgaaactagccgtt 10139701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 91 - 331
Target Start/End: Complemental strand, 10171309 - 10171068
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    ||||||||||| |||||||||  | ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||    
T  10171309 taaattgcaaaggtgtttaaagaactgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgc 10171210  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataacta 290  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  10171209 ttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttacacaaatagtcctataacta 10171110  T
Q  291 cctaatcacatcctttcga-atcaaaatcgaaactagccgtt 331  Q
    | |||||| |||  |||||  |||||||||||||||||||||    
T  10171109 cttaatcatatctgttcgatttcaaaatcgaaactagccgtt 10171068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 116 - 274
Target Start/End: Original strand, 12021453 - 12021611
Alignment:
Q  116 tgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgta 215  Q
    ||||||||| |||  | |||| |||| |||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||| ||| | |||||||||    
T  12021453 tgtattgaaattgccatgactgaatgtaagttggtgcacatattcatacattgcaacttgtgacttgtttgtcgcttccatacgaacaattttgagtgta 12021552  T
Q  216 agtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttataca 274  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  12021553 agtttttagtatgattgaattgtgacctctttttcctaagaaaaactactatttataca 12021611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 133 - 274
Target Start/End: Complemental strand, 12492056 - 12491915
Alignment:
Q  133 gacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattg 232  Q
    |||| ||| ||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  12492056 gactgaataaaagttggtgcacatgttcatacattgcaacttgtgactcgtttgtcgcttccatacggacattatttagtgtaagtttttagtatgattg 12491957  T
Q  233 agttgtgacctcttttttctaagaaaaactactatttataca 274  Q
    | ||||||||  ||||| ||||||||||||||||||||||||    
T  12491956 aattgtgacccttttttcctaagaaaaactactatttataca 12491915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 138 - 274
Target Start/End: Complemental strand, 13024007 - 13023872
Alignment:
Q  138 aatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttg 237  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||  || ||||||||||||||| | ||||||||||||||||||||||||||| |||    
T  13024007 aatgtaagttggtacacatattcatacattgcaacttgtgactcgtcagtggcttccatacggacaat-ttgagtgtaagtttttagtatgattgaattg 13023909  T
Q  238 tgacctcttttttctaagaaaaactactatttataca 274  Q
    |||||  ||||| ||||||||||||||| ||||||||    
T  13023908 tgacccttttttcctaagaaaaactactttttataca 13023872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 138 - 272
Target Start/End: Original strand, 12844571 - 12844704
Alignment:
Q  138 aatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttg 237  Q
    |||| ||||||||  |||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||| |||    
T  12844571 aatgtaagttggtgtacattttcatacattgcaacttgtaactcgttagtcgcttccatacggacagt-ttgagcgtaagtttttagtatgattgaattg 12844669  T
Q  238 tgacctcttttttctaagaaaaactactatttata 272  Q
    |||||  ||||  ||||||||||||||||||||||    
T  12844670 tgacccattttccctaagaaaaactactatttata 12844704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 146 - 279
Target Start/End: Original strand, 43135592 - 43135725
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||| |||||||||| |||||||| |||||||| || ||||||| |||| | | |||||||||||||||| |||||||||| ||||||||| |    
T  43135592 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgtgaccttt 43135690  T
Q  246 ttttt-ctaagaaaaactactatttatacagatag 279  Q
    ||||| ||| | |||||||||||||||||| ||||    
T  43135691 tttttcctagggaaaactactatttatacaaatag 43135725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 272
Target Start/End: Original strand, 132461 - 132587
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||| ||||||||||||||||||| |||||||| || ||||||| |  | | | ||| |||||||||||| |||||||||| ||||||||  |    
T  132461 ttggtacacatgttcatacattgcaacttgtgactcgtttctctcttccatgcaaataat-ttgcgtgtaagttttttgtatgattgaattgtgaccctt 132559  T
Q  246 tttttcta-agaaaaactactatttata 272  Q
    |||| |||  ||||| ||||||||||||    
T  132560 ttttcctagggaaaagctactatttata 132587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 500 - 631
Target Start/End: Complemental strand, 10170923 - 10170794
Alignment:
Q  500 aaacccttgactgcattaaatgctcatgttctcacaaatattggctaacaaattgccccccagaaacgttattttcgaactttctctccatttaggagaa 599  Q
    ||||| |||||||||||||||| |    || |||||||||| |||||||||||||||||||||||||||||| ||  |||| | | || | | | |||||    
T  10170923 aaacctttgactgcattaaatgatagcattttcacaaatatcggctaacaaattgccccccagaaacgttatgtttaaactctttttcga-tcaagagaa 10170825  T
Q  600 acttgacgtttctgaaattttttcgataaagt 631  Q
    |||||||||||||||||  |||||||||||||    
T  10170824 acttgacgtttctgaaa-attttcgataaagt 10170794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 724 - 822
Target Start/End: Complemental strand, 10170693 - 10170595
Alignment:
Q  724 attgggaaccatcaaaaaacaacttttccatgcaatgattgacatctgtccagtatcaaaagctatgtatggccctgagtcatacttttactcttactt 822  Q
    ||||||||| |||||||||||||| |||||||| ||| ||||||| |||| |  |||||| ||||| |||  |||| ||||||||||||||||| ||||    
T  10170693 attgggaactatcaaaaaacaactgttccatgcgatggttgacatttgtcaaacatcaaaggctatatataaccctaagtcatacttttactctcactt 10170595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 1934709 - 1934775
Alignment:
Q  207 ttgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatac 273  Q
    |||||||||||||||   ||||||||| ||||||||| ||||| ||| |||||||||||||||||||    
T  1934709 ttgagtgtaagttttatatatgattgaattgtgacctatttttcctatgaaaaactactatttatac 1934775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 22445060 - 22445013
Alignment:
Q  133 gacttaatgaaagttggtacacatattcatacattgcaacttgtaact 180  Q
    |||| |||| ||||||||||||| ||||||||||||||||||||||||    
T  22445060 gactaaatgtaagttggtacacaaattcatacattgcaacttgtaact 22445013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 535 - 577
Target Start/End: Original strand, 132861 - 132903
Alignment:
Q  535 aaatattggctaacaaattgccccccagaaacgttattttcga 577  Q
    ||||||||||||||||||||||| ||| |||||| ||||||||    
T  132861 aaatattggctaacaaattgccctccataaacgtcattttcga 132903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 535 - 580
Target Start/End: Original strand, 12021859 - 12021905
Alignment:
Q  535 aaatattggctaacaaattg-ccccccagaaacgttattttcgaact 580  Q
    |||||||||||||||| ||| ||||||||||||||||| ||||||||    
T  12021859 aaatattggctaacaagttgcccccccagaaacgttatgttcgaact 12021905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 606; Significance: 0; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 606; E-Value: 0
Query Start/End: Original strand, 9 - 836
Target Start/End: Original strand, 14323578 - 14324407
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  14323578 aatccgtgttgaattcaatcgaagttctgtaaataacaataatgaaaagaagtactttgaaaagacttggtaaaacaagacttaaattgcaaaagtgttt 14323677  T
Q  109 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtatt 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14323678 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtatt 14323777  T
Q  209 gagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 308  Q
    |||||||||| |||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14323778 gagtgtaagtgtttagtatgattgagttgtgacccttttttcctaagaaaaactactatttatacagatagtcctgtaactacctaatcacatcctttcg 14323877  T
Q  309 aatcaaaatcgaaactagccgttcac-aaactagtcgtttgctaaccgcttggtcttatcaataaaacctgaagagcgcgtcgacaacttctttcatccg 407  Q
    | |||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||   || ||||||||||||||||||||||||||||||||||    
T  14323878 attcaaaatcgaaactagccgttcacaaaactagccgtttgctaactgcttggtcttatccgcaagacctgaagagcgcgtcgacaacttctttcatccg 14323977  T
Q  408 tcgaactaaaaacaacgtcttcgattcctgctgaagtacacttgtatttttcgatggatttccttcacaaagctacgccccatttttacgtcaaaccctt 507  Q
    |||||||| ||||||||||||||||||||||||||| ||| ||||||||||| ||||||||| ||| ||||| | |||||||| |||  |||||||||||    
T  14323978 tcgaactagaaacaacgtcttcgattcctgctgaagcacatttgtatttttcaatggatttctttctcaaagtttcgccccatctttcggtcaaaccctt 14324077  T
Q  508 gactgcattaaatgctcatgttctcacaaatattggctaacaaattgccccccagaaacgttattttcgaactttctctc---catttaggagaaacttg 604  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||     |||||||||||||||    
T  14324078 gactgcattaaatgctcatattctcacaaatattggctaacaaattgccccccataaacgttatgttcgaactttctctctcgattttaggagaaacttg 14324177  T
Q  605 acgtttctgaaattttttcgataaagtgcaattcctcagcatgacatcattcttttgacaacgggatatttcaaaaggtgcagaaccgtcttcataagga 704  Q
    ||||||||||||  || | ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  14324178 acgtttctgaaaaattct-gatgaagtgcatttcctcagcatgacatcattcttttgacaacgggatatttcaaaaggtgcagaaccgtcttcataaaga 14324276  T
Q  705 cttagtgggccataccgtcattgggaaccatcaaaaaacaacttttccatgcaatgattgacatctgtccagtatcaaaagctatgtatggccctgagtc 804  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||| |||||||||||||||| |||| |||||||||    
T  14324277 cttagtgggccataccgtcattgggaaccatc-aaaaacaactgttccatgcgatgattgacatctgttcagtatcaaaagctatatatgaccctgagtc 14324375  T
Q  805 atacttttactcttacttcatttctctttagt 836  Q
    ||||||||||| ||||||| ||||||||||||    
T  14324376 atacttttacttttacttcgtttctctttagt 14324407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 410; E-Value: 0
Query Start/End: Original strand, 9 - 549
Target Start/End: Original strand, 14345771 - 14346312
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    ||||||||||| |||||||| ||||||||||||||| || |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  14345771 aatccgtgttgaattcaatctaagttctgtaaataacaataatgaaaagaagtactttgaaaagacttggtaaaacaagacttaaattgcaaaagtgttt 14345870  T
Q  109 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtatt 208  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14345871 aaaagattgtattgaatttgtaaagacttaatgaaaattggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtatt 14345970  T
Q  209 gagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 308  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14345971 gagtgtaagtttttagtatgattgagttgtgacccttttttcctaagaaaaactactatttatacagatagtcctgtaactacctaatcacatcctttcg 14346070  T
Q  309 aatcaaaatcgaaactagccgttcac-aaactagtcgtttgctaaccgcttggtcttatcaataaaacctgaagagcgcgtcgacaacttctttcatccg 407  Q
    | |||||||| ||||||||||||||| |||||||  |||||||||| |||||||||||||   || ||||||||||||||||||||||||||||||||||    
T  14346071 attcaaaatcaaaactagccgttcacaaaactagctgtttgctaactgcttggtcttatccgcaagacctgaagagcgcgtcgacaacttctttcatccg 14346170  T
Q  408 tcgaactaaaaacaacgtcttcgattcctgctgaagtacacttgtatttttcgatggatttccttcacaaagctacgccccatttttacgtcaaaccctt 507  Q
    |||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||| ||||||| |||||||| |||  |||||||||||    
T  14346171 tcgaactagaaacaacgtcttcgattcctgctgaagcacatttgtatttttcgatggatttctttctcaaagcttcgccccatctttcggtcaaaccctt 14346270  T
Q  508 gactgcattaaatgctcatgttctcacaaatattggctaaca 549  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  14346271 gactgcattaaatgctcatattctcacaaatattggctaaca 14346312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 402; E-Value: 0
Query Start/End: Original strand, 9 - 549
Target Start/End: Original strand, 14035741 - 14036282
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    ||||||||||| |||||||| ||||||||||||||| || |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  14035741 aatccgtgttgaattcaatctaagttctgtaaataacaataatgaaaagaagtactttgaaaagacttggtaaaacaagacttaaattgcaaaagtgttt 14035840  T
Q  109 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtatt 208  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14035841 aaaagattgtattgaatttgtaaagacttaatgaaatttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtatt 14035940  T
Q  209 gagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 308  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14035941 gagtgtaagtttttagtatgattgagttgtgacccttttttcctaagaaaaactactatttatacagatagtcctgtaactacctaatcacatcctttcg 14036040  T
Q  309 aatcaaaatcgaaactagccgttcac-aaactagtcgtttgctaaccgcttggtcttatcaataaaacctgaagagcgcgtcgacaacttctttcatccg 407  Q
    | |||||||| ||||||||||||||| |||||||  |||||||||| |||||||||||||   || ||||||| ||||||||||||||||||||||||||    
T  14036041 attcaaaatcaaaactagccgttcacaaaactagctgtttgctaactgcttggtcttatccgcaagacctgaatagcgcgtcgacaacttctttcatccg 14036140  T
Q  408 tcgaactaaaaacaacgtcttcgattcctgctgaagtacacttgtatttttcgatggatttccttcacaaagctacgccccatttttacgtcaaaccctt 507  Q
    |||||||| |||||||||||| |||||||||||||| ||| ||||||||||||||||||||| ||| ||||||| |||||||| |||  |||||||||||    
T  14036141 tcgaactagaaacaacgtctttgattcctgctgaagcacatttgtatttttcgatggatttctttctcaaagcttcgccccatctttcggtcaaaccctt 14036240  T
Q  508 gactgcattaaatgctcatgttctcacaaatattggctaaca 549  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  14036241 gactgcattaaatgctcatattctcacaaatattggctaaca 14036282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 9 - 550
Target Start/End: Original strand, 18141665 - 18142201
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    ||||||||||| ||||||||||| |  ||||||| |||  |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  18141665 aatccgtgttgaattcaatcgaaatgttgtaaatgatagtaatgaaaagaagtactttaaaaagacttagtaaaacaagacttaaattgcaaaagtgttt 18141764  T
Q  109 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtatt 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18141765 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtatt 18141864  T
Q  209 gagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 308  Q
    ||||||||| ||||||||||||||| ||||||||  ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  18141865 gagtgtaag-ttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatacagatagccctataactacctaatcatatcctttcg 18141963  T
Q  309 aatcaaaatcgaaactagccgttca-caaactagtcgtttgctaaccgcttggtcttatcaataaaacctgaagagcgcgtcgacaacttctttcatccg 407  Q
    | |||||||||||||||||||||||  ||||||| ||||||| ||||||||||||||||| | || ||||   ||| |||||||  |||||||| |||||    
T  18141964 attcaaaatcgaaactagccgttcataaaactagccgtttgcaaaccgcttggtcttatccacaagacct---gagtgcgtcgatgacttcttttatccg 18142060  T
Q  408 tcgaactaaaaacaacgtcttcgattcctgctgaagtacacttgtatttttcgatggatttccttcacaaagctacgccccatttttacgtcaaaccctt 507  Q
     ||||||||||||| | ||||||||||||||||||||| ||||| ||||||||||||| ||| ||||||||||||||||||| ||||| |||||||  ||    
T  18142061 acgaactaaaaacaccttcttcgattcctgctgaagtaaacttgcatttttcgatgga-ttctttcacaaagctacgcccca-ttttaggtcaaacgttt 18142158  T
Q  508 gactgcattaaatgctcatgttctcacaaatattggctaacaa 550  Q
    |||||||||||||| |||| ||  |||||||||||||||||||    
T  18142159 gactgcattaaatggtcatatttccacaaatattggctaacaa 18142201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 9 - 550
Target Start/End: Original strand, 18115097 - 18115633
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    ||||||||||| ||||||||||| |  ||||||| |||  |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  18115097 aatccgtgttgaattcaatcgaaatgttgtaaatgatagtaatgaaaagaagtactttaaaaagacttagtaaaacaagacttaaattgcaaaagtgttt 18115196  T
Q  109 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtatt 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  18115197 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatactttgcaacttgtaactcgtttgtcacttccatacggacagtatt 18115296  T
Q  209 gagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 308  Q
    ||||||||| ||||||||||||||| ||||||||  ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  18115297 gagtgtaag-ttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatacagatagccctataactacctaatcatatcctttcg 18115395  T
Q  309 aatcaaaatcgaaactagccgttca-caaactagtcgtttgctaaccgcttggtcttatcaataaaacctgaagagcgcgtcgacaacttctttcatccg 407  Q
    | |||||||||||||||| | ||||  ||||||||||||||||||||||||||||||||| | || | ||   |||||||||||  |||||||| |||||    
T  18115396 attcaaaatcgaaactagtccttcataaaactagtcgtttgctaaccgcttggtcttatccacaagatct---gagcgcgtcgatgacttcttttatccg 18115492  T
Q  408 tcgaactaaaaacaacgtcttcgattcctgctgaagtacacttgtatttttcgatggatttccttcacaaagctacgccccatttttacgtcaaaccctt 507  Q
     ||||||||||||| | ||||||||||||||||||||| ||||| ||||||||||||| ||| ||||||||||||||||||| ||||| |||||||  ||    
T  18115493 acgaactaaaaacaccttcttcgattcctgctgaagtaaacttgcatttttcgatgga-ttctttcacaaagctacgcccca-ttttaggtcaaacgttt 18115590  T
Q  508 gactgcattaaatgctcatgttctcacaaatattggctaacaa 550  Q
    |||||||||||||| |||| ||  |||||||||||||||||||    
T  18115591 gactgcattaaatggtcatatttccacaaatattggctaacaa 18115633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 9 - 549
Target Start/End: Original strand, 44277540 - 44278079
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    |||||| |||| || |||||||| ||||||||||||||||| |  || ||||||||||||||||||||||||||  ||||||| |||| |||||||||||    
T  44277540 aatccgagttgaatccaatcgaaattctgtaaataataacagtagaaggaagtactttgaaaagacttagtaaaccaagacttgaattacaaaagtgttt 44277639  T
Q  109 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtatt 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  44277640 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtatt 44277739  T
Q  209 gagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 308  Q
    ||||||||||||||||||||| ||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44277740 gagtgtaagtttttagtatgactgaattgtgacccattttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 44277839  T
Q  309 aatc-aaaatcgaaac-tagccgttcacaaactagtcgtttgctaaccgcttggtcttatcaataaaacctgaagagcgcgtcgacaacttctttcatcc 406  Q
    | || ||||||||||| |||||||||  ||||||| ||||||||||||||||||||||||| |  | || ||||| ||||||| ||| ||||||||||||    
T  44277840 attcaaaaatcgaaacttagccgttcgaaaactagccgtttgctaaccgcttggtcttatctaccagacttgaag-gcgcgtctacagcttctttcatcc 44277938  T
Q  407 gtcgaactaaaaacaacgtcttcgattcctgctgaagtacacttgtatttttcgatggatttccttcacaaagctacgccccatttttacgtcaaaccct 506  Q
    |||||||| |||||| | ||||||||||| ||||| |||||  |||||||  |||||||||| |||||||||||||||||||| ||||  ||||||||||    
T  44277939 gtcgaact-aaaacagcttcttcgattcccgctgaggtacatatgtatttgccgatggattt-cttcacaaagctacgccccaattttgggtcaaaccct 44278036  T
Q  507 tgactgcattaaatgctcatgttctcacaaatattggctaaca 549  Q
    ||||||||||||||| |||| || |||||||||||| ||||||    
T  44278037 tgactgcattaaatgatcatattttcacaaatattgactaaca 44278079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 24 - 331
Target Start/End: Original strand, 18174752 - 18175057
Alignment:
Q  24 caatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgtttaaaagattgtattga 123  Q
    |||||||| ||||||||| ||| |||||  ||  || ||||| ||||||| ||| |||||  ||||||||||||||||||||||||||||| ||||||||    
T  18174752 caatcgaaattctgtaaagaatgacaatagaagaaaatacttcgaaaagatttaataaaa--agacttaaattgcaaaagtgtttaaaagactgtattga 18174849  T
Q  124 atttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagttttta 223  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||  || |||||||||||||||||||||||||||    
T  18174850 atttgtaaagacttaatgaaagttggtacacatattcatactttgcaacttgtgactcgtttgtcgctctcacacggacagtattgagtgtaagttttta 18174949  T
Q  224 gtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcgaatcaaaatcgaaac 323  Q
    |||||||||| ||||||||  ||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||  |||||   |||||||||||    
T  18174950 gtatgattgaattgtgacccgtttttcctaagaaaaactactatttatacagataatcctataactacctaatcatatctattcgatcaaaaatcgaaac 18175049  T
Q  324 tagccgtt 331  Q
    ||||||||    
T  18175050 tagccgtt 18175057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 9 - 241
Target Start/End: Original strand, 18159967 - 18160197
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    ||||||||||| || |||||||| ||||||||| ||| | |||  ||  || ||||| ||| ||| ||| ||||  ||||||||||||||||||||||||    
T  18159967 aatccgtgttgaatccaatcgaaattctgtaaagaatgataatagaagaaaatacttcgaagagatttaataaa--aagacttaaattgcaaaagtgttt 18160064  T
Q  109 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtatt 208  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  18160065 aaaagactgtattgaatttgtaaagacttaatgaaagttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtatt 18160164  T
Q  209 gagtgtaagtttttagtatgattgagttgtgac 241  Q
    ||||||||||||||||||||||||| |||||||    
T  18160165 gagtgtaagtttttagtatgattgaattgtgac 18160197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 116 - 303
Target Start/End: Complemental strand, 15758715 - 15758528
Alignment:
Q  116 tgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgta 215  Q
    |||||| || ||||||||||||||||||| ||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  15758715 tgtattaaaattgtaaagacttaatgaaatttggtacacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggacaatattgagtgta 15758616  T
Q  216 agtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcc 303  Q
    |||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||| ||| ||||    
T  15758615 agttttgagtatgattgaattgtgacctctttttcctaagaaaaactactatttatacagatagacatataactacctagtcatatcc 15758528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 91 - 298
Target Start/End: Original strand, 1978174 - 1978381
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  ||||||||  | ||||||| | |||||||||||||| |||| ||||||||||| ||||||| ||||||||||| |||||||||||||    
T  1978174 taaattgcaaagatgtttaaagaaatgtattggaattgtaaagacttaacgaaatttggtacacatgttcatactttgcaacttgtgactcgtttgtcgc 1978273  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataacta 290  Q
    || |||||||||| |||||||||||| |||| ||||||||||| ||||||||  ||||  |||||||||||||||||||||||| |||| | ||||||||    
T  1978274 tttcatacggacaatattgagtgtaaattttgagtatgattgaattgtgacccgttttccctaagaaaaactactatttatacaaatagacttataacta 1978373  T
Q  291 cctaatca 298  Q
    ||||||||    
T  1978374 cctaatca 1978381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 116 - 274
Target Start/End: Original strand, 11989376 - 11989534
Alignment:
Q  116 tgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgta 215  Q
    ||||||||| ||| |  |||| ||| || |||||| ||||  ||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||    
T  11989376 tgtattgaaattgcattgactgaataaaggttggtgcacacgttcatacattgcaacttatgactcgtttgtcgcttccatacggatagtattgagtgta 11989475  T
Q  216 agtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttataca 274  Q
    |||||||||||||||||| ||||||||  ||||| ||||||||||||||||||||||||    
T  11989476 agtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttataca 11989534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 146 - 279
Target Start/End: Original strand, 40342863 - 40342995
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||| ||||||||||||||||||| |||||||| || ||||||| |||| | | |||||||||||||||| |||||||||| |||||||| ||    
T  40342863 ttggtacacatgttcatacattgcaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgtgaccact 40342961  T
Q  246 tttttctaagaaaaactactatttatacagatag 279  Q
    |||   |||| |||||||||||||||||| ||||    
T  40342962 tttcattaaggaaaactactatttatacaaatag 40342995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 138 - 279
Target Start/End: Complemental strand, 18752782 - 18752644
Alignment:
Q  138 aatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttg 237  Q
    |||| ||||||||||||| |||||||||||||||||||| |||| ||| ||| ||||||||||| | | ||||| |||||||||  |||||||||| |||    
T  18752782 aatgtaagttggtacacagattcatacattgcaacttgtgactcatttctcgattccatacggataat-ttgagcgtaagtttt--gtatgattgaattg 18752686  T
Q  238 tgacctcttttttctaagaaaaactactatttatacagatag 279  Q
    |||||  ||||| |||| ||||| ||||||||||||| ||||    
T  18752685 tgacccttttttcctaaaaaaaattactatttatacaaatag 18752644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 146 - 279
Target Start/End: Original strand, 10827806 - 10827940
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    |||||||||| |||||||||||||||||||| |||||||| || ||||||| |||| | | |||||||||||||||  |||||||||   ||||||| ||    
T  10827806 ttggtacacagattcatacattgcaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttgtgtatgattggactgtgacc-ct 10827903  T
Q  246 tttttc---taagaaaaactactatttatacagatag 279  Q
    ||||||   || | |||||||||||||||||| ||||    
T  10827904 tttttcccttagggaaaactactatttatacaaatag 10827940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 146 - 279
Target Start/End: Original strand, 11021598 - 11021732
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    |||||||||| |||||||||||||||||||| |||||||| || ||||||| |||| | | |||||||||||||||  |||||||||   ||||||| ||    
T  11021598 ttggtacacagattcatacattgcaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttgtgtatgattggactgtgacc-ct 11021695  T
Q  246 tttttc---taagaaaaactactatttatacagatag 279  Q
    ||||||   || | |||||||||||||||||| ||||    
T  11021696 tttttcccttagggaaaactactatttatacaaatag 11021732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 167 - 279
Target Start/End: Original strand, 24876397 - 24876509
Alignment:
Q  167 tgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtga-cctcttttttctaagaaaaactact 265  Q
    |||||||||| |||||||| || ||||||| |||| | | |||||||||||||||| |||||||||| |||||| ||| ||||| ||| | |||||||||    
T  24876397 tgcaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgtgaccctttttttcctagggaaaactact 24876495  T
Q  266 atttatacagatag 279  Q
    ||||||||| ||||    
T  24876496 atttatacaaatag 24876509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 196
Target Start/End: Complemental strand, 10864237 - 10864187
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccat 196  Q
    |||||||||| |||||||||||||||||||| |||||||| || |||||||    
T  10864237 ttggtacacagattcatacattgcaacttgtgactcgtttctctcttccat 10864187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 535 - 577
Target Start/End: Original strand, 10828208 - 10828250
Alignment:
Q  535 aaatattggctaacaaattgccccccagaaacgttattttcga 577  Q
    ||||||||||||||||||||||| |||||||||| || |||||    
T  10828208 aaatattggctaacaaattgcccaccagaaacgtcatcttcga 10828250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 535 - 565
Target Start/End: Complemental strand, 10863893 - 10863863
Alignment:
Q  535 aaatattggctaacaaattgccccccagaaa 565  Q
    |||||||||||||||||||||||||||||||    
T  10863893 aaatattggctaacaaattgccccccagaaa 10863863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 535 - 577
Target Start/End: Original strand, 11022000 - 11022042
Alignment:
Q  535 aaatattggctaacaaattgccccccagaaacgttattttcga 577  Q
    ||||||||||||||||||||||| |||||||||| || |||||    
T  11022000 aaatattggctaacaaattgcccaccagaaacgtcatcttcga 11022042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 535 - 577
Target Start/End: Original strand, 13347015 - 13347057
Alignment:
Q  535 aaatattggctaacaaattgccccccagaaacgttattttcga 577  Q
    ||||||||||||||||||||||||||| |||||| | ||||||    
T  13347015 aaatattggctaacaaattgccccccataaacgtcactttcga 13347057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 489; Significance: 0; HSPs: 2)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 489; E-Value: 0
Query Start/End: Original strand, 9 - 838
Target Start/End: Original strand, 46140 - 46966
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    ||||||||||| || |||||||| ||||||||||||| ||| | ||| |||||||||||||| |||||||||||| ||||||| |||| |||||||||||    
T  46140 aatccgtgttgaatccaatcgaaattctgtaaataatgacagtaaaaggaagtactttgaaaggacttagtaaaacaagacttgaattacaaaagtgttt 46239  T
Q  109 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtatt 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  46240 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatatacatactttgcaacttgtgactcgtttgtcgcttccatacggacagtatt 46339  T
Q  209 gagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 308  Q
    ||||||||||||||||||||||||| ||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46340 gagtgtaagtttttagtatgattgaattgtgacccatttttcctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 46439  T
Q  309 aatc-aaaatcgaaactagccgttcacaaactagtcgtttgctaaccgcttggtcttatcaataaaacctgaagagcgcgtcgacaacttctttcatccg 407  Q
    | || |||||| |||||||||||||  ||||||| |||||||||||| |||||||||||| | || |||||||| ||||||| ||| |||||||||||||    
T  46440 attcaaaaatcaaaactagccgttcgaaaactagccgtttgctaaccacttggtcttatccacaagacctgaag-gcgcgtctacagcttctttcatccg 46538  T
Q  408 tcgaactaaaaacaacgtcttcgattcctgctgaagtacacttgtatttttcgatggatttccttcacaaagctacgccccatttttacgtcaaaccctt 507  Q
    ||||||| |||||| | ||||||||||||||||| |||||| ||||||| ||||||||||| |||||||||||||||||| ||||||  |||||||||||    
T  46539 tcgaact-aaaacagcttcttcgattcctgctgaggtacacatgtatttgtcgatggattt-cttcacaaagctacgccctatttttgggtcaaaccctt 46636  T
Q  508 gactgcattaaatgctcatgttctcacaaatattggctaacaaattg-ccccccagaaacgttattttcgaactt-tctctccatttaggagaaacttga 605  Q
    |||||||||||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||||| || |||||| ||| || | | |||||||||||||    
T  46637 gactgcattaaatgatcatattctcacaaatattgactaacaaattgcccccccagaaacgttatgtttgaacttctctttcga-tcaggagaaacttga 46735  T
Q  606 cgtttctgaaattttttcgataaagtgcaattcctcagcatgacatcattcttttgacaacgggatatttcaaaaggtgcagaaccgtcttcataaggac 705  Q
    |||||||||||  ||| |||||||||   | ||||||||||||||||| |||||| || ||||||||||| ||||||| || ||||| |||||| |||||    
T  46736 cgtttctgaaa-atttccgataaagtatgactcctcagcatgacatcactcttttaactacgggatatttgaaaaggttcaaaaccgccttcatcaggac 46834  T
Q  706 ttagtgggccataccgtcattgggaaccatcaaaaaacaacttttccatgcaatgattgacatctgtccagtatcaaaagctatgtatggccctgagtca 805  Q
    |||||||||||| |||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||  |||||||||||| |||| ||||||||||    
T  46835 ttagtgggccatgccgtcattgggaaccatc-aaaaacaactgttccatgcgatgattgacatctgtccaacatcaaaagctatatatgaccctgagtca 46933  T
Q  806 tacttttactcttacttcatttctctttagtat 838  Q
    |||||||||||||||||  ||||||||||||||    
T  46934 tacttttactcttactttgtttctctttagtat 46966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101; HSP #2
Raw Score: 447; E-Value: 0
Query Start/End: Original strand, 98 - 837
Target Start/End: Original strand, 50867 - 51603
Alignment:
Q  98 caaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccata 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  50867 caaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccata 50966  T
Q  198 cggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatc 297  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  50967 cggacagtattgagtgtaagtttttagtatgattgaattgtgacccatttttcctaagaaaaactactatttatacagatagtcctataactacctaatc 51066  T
Q  298 acatcctttcgaatc-aaaatcgaaactagccgttcacaaactagtcgtttgctaaccgcttggtcttatcaataaaacctgaagagcgcgtcgacaact 396  Q
    |||||||||||| || |||||| |||||||||||||  ||||||| |||||||||||| |||||||||||| | || |||||||| ||||||| ||| ||    
T  51067 acatcctttcgattcaaaaatcaaaactagccgttcgaaaactagccgtttgctaaccacttggtcttatccacaagacctgaag-gcgcgtctacagct 51165  T
Q  397 tctttcatccgtcgaactaaaaacaacgtcttcgattcctgctgaagtacacttgtatttttcgatggatttccttcacaaagctacgccccatttttac 496  Q
    |||||||||||||||||| |||||| | ||||||||||||||||| |||||| ||||||| ||||||||||| |||||||||||||||||| ||||||      
T  51166 tctttcatccgtcgaact-aaaacagcttcttcgattcctgctgaggtacacatgtatttgtcgatggattt-cttcacaaagctacgccctatttttgg 51263  T
Q  497 gtcaaacccttgactgcattaaatgctcatgttctcacaaatattggctaacaaattg-ccccccagaaacgttattttcgaactt-tctctccatttag 594  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||||| || |||||| ||| || | | ||    
T  51264 gtcaaacccttgactgcattaaatgatcatattctcacaaatattgactaacaaattgcccccccagaaacgttatgtttgaacttctctttcga-tcag 51362  T
Q  595 gagaaacttgacgtttctgaaattttttcgataaagtgcaattcctcagcatgacatcattcttttgacaacgggatatttcaaaaggtgcagaaccgtc 694  Q
    ||||||||||||||||||||||  ||| |||||||||   | ||||||||||||||||| |||||| || ||||||||||| ||||||| || ||||| |    
T  51363 gagaaacttgacgtttctgaaa-atttccgataaagtatgactcctcagcatgacatcactcttttaactacgggatatttgaaaaggttcaaaaccgcc 51461  T
Q  695 ttcataaggacttagtgggccataccgtcattgggaaccatcaaaaaacaacttttccatgcaatgattgacatctgtccagtatcaaaagctatgtatg 794  Q
    ||||| ||||||||||||||||| |||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||  |||||||||||| ||||    
T  51462 ttcatcaggacttagtgggccatgccgtcattgggaaccatc-aaaaacaactgttccatgcgatgattgacatctgtccaacatcaaaagctatatatg 51560  T
Q  795 gccctgagtcatacttttactcttacttcatttctctttagta 837  Q
     |||||||||||||||||||||||||||  |||||||||||||    
T  51561 accctgagtcatacttttactcttactttgtttctctttagta 51603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 468; Significance: 0; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 468; E-Value: 0
Query Start/End: Original strand, 9 - 838
Target Start/End: Complemental strand, 22086662 - 22085837
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    ||||||||||| || |||||||| || |||||||||| ||| | ||| |||||||||||||| |||||||||||| ||||||| |||| || ||||||||    
T  22086662 aatccgtgttgaatccaatcgaaattttgtaaataatgacagtaaaaggaagtactttgaaaggacttagtaaaacaagacttgaattacataagtgttt 22086563  T
Q  109 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtatt 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||    
T  22086562 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacttttcaacttgtgactcgtttgtcgcttccatacggacagtatt 22086463  T
Q  209 gagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 308  Q
     |||||||||||||||||||||||| ||||||||  ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22086462 aagtgtaagtttttagtatgattgaattgtgacccatttttcctaagaaaaactactatttatacggatagtcctataactacctaatcacatcctttcg 22086363  T
Q  309 aatc-aaaatcgaaactagccgttcacaaactagtcgtttgctaaccgcttggtcttatcaataaaacctgaagagcgcgtcgacaacttctttcatccg 407  Q
    | || ||||||||||||||||||||   |||||| ||||||||||||||||||||||||| | || |||||||| || |||| ||| |||||||||||||    
T  22086362 attcaaaaatcgaaactagccgttcgagaactagccgtttgctaaccgcttggtcttatccacaagacctgaag-gctcgtctacagcttctttcatccg 22086264  T
Q  408 tcgaactaaaaacaacgtcttcgattcctgctgaagtacacttgtatttttcgatggatttccttcacaaagctacgccccatttttacgtcaaaccctt 507  Q
    ||||||| |||||| | |||||||||||| |||| |||||| ||||||| ||||||||||| |||||||||||||||||| ||||||  |||||||||||    
T  22086263 tcgaact-aaaacagcttcttcgattcctactgaggtacacatgtatttgtcgatggattt-cttcacaaagctacgccctatttttgggtcaaaccctt 22086166  T
Q  508 gactgcattaaatgctcatgttctcacaaatattggctaacaaattgccccccagaaacgttattttcgaactt-tctctccatttaggagaaacttgac 606  Q
    |||||||||||||| |||| ||||||||||||||| |||||||||||||||||| ||||||||| || |||||| ||| || | | ||||||||||||||    
T  22086165 gactgcattaaatgatcatattctcacaaatattgactaacaaattgccccccataaacgttatgtttgaacttctctttcga-tcaggagaaacttgac 22086067  T
Q  607 gtttctgaaattttttcgataaagtgcaattcctcagcatgacatcattcttttgacaacgggatatttcaaaaggtgcagaaccgtcttcataaggact 706  Q
    |||| |||||  ||| |||||||||   | ||||||||||||||||  |||||| |||||||||||||| ||||||| || ||||| |||||| ||||||    
T  22086066 gtttttgaaa-atttccgataaagtatgactcctcagcatgacatcgctcttttaacaacgggatatttgaaaaggttcaaaaccgccttcatcaggact 22085968  T
Q  707 tagtgggccataccgtcattgggaaccatcaaaaaacaacttttccatgcaatgattgacatctgtccagtatcaaaagctatgtatggccctgagtcat 806  Q
    ||||||||||| |||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||  |||||||||||| |||| |||||||||||    
T  22085967 tagtgggccatgccgtcattgggaaccatc-aaaaacaactgttccatgcgatgattgacatctgtccaacatcaaaagctatatatgaccctgagtcat 22085869  T
Q  807 acttttactcttacttcatttctctttagtat 838  Q
    ||||||||||||||||  ||||||||||||||    
T  22085868 acttttactcttactttgtttctctttagtat 22085837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 426; E-Value: 0
Query Start/End: Original strand, 9 - 828
Target Start/End: Original strand, 41368534 - 41369343
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    ||||||||||| ||||||||||| |  ||||||| ||| ||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  41368534 aatccgtgttgaattcaatcgaaatgttgtaaatgatagcaatgaaaagaagtactttaaaaagacttagtacaacaagacttaaattgcaaaagtgttt 41368633  T
Q  109 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtatt 208  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  41368634 aaaagattgtattgaatttgtaaagacttaatgaaaattggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacaatatt 41368733  T
Q  209 gagtgtaagtttttagtatgattgagttgtgacctcttttttctaag-aaaaactactatttatacagatagtcctataactacctaatcacatcctttc 307  Q
    ||||||||| ||||||||||||||| |||||||| |||||| ||||| |||||||| |||||||||||||||||||||||||||||||||| |||| |||    
T  41368734 gagtgtaag-ttttagtatgattgaattgtgacc-ctttttcctaagaaaaaactattatttatacagatagtcctataactacctaatcatatcc-ttc 41368830  T
Q  308 gaatcaaaatcgaaactagccgttcacaaactagtcgtttgctaaccgcttggtcttatcaataaaacctgaagagcgcgtcgacaacttctttcatccg 407  Q
    || |||||||||| |||||||||||  ||||||| ||||||||||||| |||| |||||| | ||||| || |  |||||||||||||||| || | | |    
T  41368831 gattcaaaatcgagactagccgttc-gaaactagccgtttgctaaccgtttggccttatccaaaaaacttggaaggcgcgtcgacaacttcctttacctg 41368929  T
Q  408 tcgaactaaaaacaacgtcttcgattcctgctgaagtacacttgtatttttcgatggatttccttcacaaagctacgccccatttttacgtcaaaccctt 507  Q
    |||||| |||| | || |||||||||| |||||||||| | |||||||||||||||||||   | ||||||||||||||||||||||| |||||||||||    
T  41368930 tcgaacaaaaacctac-tcttcgattcatgctgaagtagatttgtatttttcgatggattctttccacaaagctacgccccatttttaggtcaaaccctt 41369028  T
Q  508 gactgcattaaatgctcatgttctcacaaatattggctaacaaattgccccccagaaacgttattttcgaactttc-tctcc---atttaggagaaactt 603  Q
    |||||||||||||| |||| || |||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||| |    ||||||||||||||    
T  41369029 gactgcattaaatgatcatattttcacaaatattggctaacaaattg-cccccagaaacgttatgttcgaactttcttcttcgatttttaggagaaactt 41369127  T
Q  604 gacgtttctgaaattttttcgataaagtgcaattcctcagcatgacatcattcttttgacaacgggatatttcaaaaggtgcagaaccgtcttcataagg 703  Q
    ||||||||| ||        || ||  || || || |||||||||||||||||||||| |||||||||||||||| ||||| ||||||||| |||||| |    
T  41369128 gacgtttctaaa--------gaaaacatgtaactcgtcagcatgacatcattcttttggcaacgggatatttcaagaggtgtagaaccgtcatcataaag 41369219  T
Q  704 acttagtgggccataccgtcattgggaaccatcaaaaaacaacttttccatgcaatgattgacatctgtccagtatcaaaagctatgtatggccctgagt 803  Q
    |||||||||||||||||||| ||||||| ||| ||||||||||| ||||| || |||||||||||||||||||||||||||||||| |||| |  |||||    
T  41369220 acttagtgggccataccgtcgttgggaatcat-aaaaaacaactgttccacgcgatgattgacatctgtccagtatcaaaagctatatatgactatgagt 41369318  T
Q  804 catacttttactcttacttcatttc 828  Q
    ||||||||| |||||||||||||||    
T  41369319 catacttttgctcttacttcatttc 41369343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 9 - 549
Target Start/End: Original strand, 41383438 - 41383977
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    ||||||||||| ||||||||||| |  ||||||| ||| ||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  41383438 aatccgtgttgaattcaatcgaaatgttgtaaatgatagcaatgaaaagaagtactttaaaaagacttagtacaacaagacttaaattgcaaaagtgttt 41383537  T
Q  109 aaaaga---ttgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagt 205  Q
    ||||||   |||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||    
T  41383538 aaaagaatattgtattgaatttgtaaagacttaatgaaaattggtacacatattcatactttgcgacttgtaactcgtttgtcgcttccatatggacagt 41383637  T
Q  206 attgagtgtaagtttttagtatgattgagttgtgacctcttttttctaag-aaaaactactatttatacagatagtcctataactacctaatcacatcct 304  Q
    |||||||||||| ||||||||||||||| |||||||| |||||| ||||| |||||||| |||||||||||||||||||||||||||||||||| ||||     
T  41383638 attgagtgtaag-ttttagtatgattgaattgtgacc-ctttttcctaagaaaaaactattatttatacagatagtcctataactacctaatcatatcc- 41383734  T
Q  305 ttcgaatcaaaatcgaaactagccgttcacaaactagtcgtttgctaaccgcttggtcttatcaataaaacctgaagagcgcgtcgacaacttctttcat 404  Q
    ||||| |||||||||| |||||||||||| ||||||| ||||||||||||| |||| |||||| | ||||| || |  |||||||||||||||| || |     
T  41383735 ttcgattcaaaatcgagactagccgttca-aaactagccgtttgctaaccgtttggccttatccaaaaaacttggaaggcgcgtcgacaacttcctttac 41383833  T
Q  405 ccgtcgaactaaaaacaacgtcttcgattcctgctgaagtacacttgtatttttcgatggatttccttcacaaagctacgccccatttttacgtcaaacc 504  Q
    | ||||||| |||| | || ||||||||||||||||||||| | |||||||||||||||||||   | ||||||||||||||||||||||| ||||||||    
T  41383834 ctgtcgaacaaaaacctac-tcttcgattcctgctgaagtagatttgtatttttcgatggattctttccacaaagctacgccccatttttaggtcaaacc 41383932  T
Q  505 cttgactgcattaaatgctcatgttctcacaaatattggctaaca 549  Q
    ||||||||||||||||| |||| || |||||||||||||||||||    
T  41383933 cttgactgcattaaatgatcatattttcacaaatattggctaaca 41383977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 91 - 294
Target Start/End: Original strand, 22809018 - 22809221
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||| ||||||||  | ||| ||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| |||||||||| ||    
T  22809018 taaattgcaaaaatgtttaaagaaatgtcttgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgttgc 22809117  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataacta 290  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| ||||||||||| |||||||||||| |||| | ||||||||    
T  22809118 ttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaaccactatttatacaaatagacttataacta 22809217  T
Q  291 ccta 294  Q
    ||||    
T  22809218 ccta 22809221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 91 - 294
Target Start/End: Original strand, 31845613 - 31845816
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  ||||||||  | ||||||||| ||| ||||| ||||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||    
T  31845613 taaattgcaaagatgtttaaagaaatgtattgaaattgcaaagatttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgc 31845712  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataacta 290  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||  ||||| |||||||||||||||||||||||| |||| ||||||||||    
T  31845713 ttccatacggacagtattgagtgtaagttttgagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatacaaatagacctataacta 31845812  T
Q  291 ccta 294  Q
    ||||    
T  31845813 ccta 31845816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 116 - 298
Target Start/End: Original strand, 1528629 - 1528811
Alignment:
Q  116 tgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgta 215  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  1528629 tgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgtttccatacggacagtattgagtgta 1528728  T
Q  216 agtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatca 298  Q
    |||||||||||||||||| ||||||||  |||||  ||||||||||| ||||||||||| |||| | ||||||| ||||||||    
T  1528729 agtttttagtatgattgaattgtgacccgtttttcgtaagaaaaacttctatttatacaaatagacatataactgcctaatca 1528811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 116 - 298
Target Start/End: Complemental strand, 27562054 - 27561872
Alignment:
Q  116 tgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgta 215  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||    
T  27562054 tgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttacaacttgtgactcgtttgtcgcttccatacggacagtattgagtgta 27561955  T
Q  216 agtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatca 298  Q
    ||||||| |||| ||||| ||||||||| |||||  ||||||||||| ||||||||||| ||| |||||||||| ||||||||    
T  27561954 agttttttgtattattgaattgtgacctgtttttcttaagaaaaacttctatttatacaaataatcctataactgcctaatca 27561872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 91 - 279
Target Start/End: Complemental strand, 29305399 - 29305211
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  ||||||||  | ||||||||| ||  | ||||||||||||| ||||| ||||| ||||||| ||||||||||| |||||||||||||    
T  29305399 taaattgcaaagatgtttaaagaaatgtattgaaattacatagacttaatgaaaattggtgcacatgttcatactttgcaacttgtgactcgtttgtcgc 29305300  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatag 279  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||||| ||||    
T  29305299 ttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatacaaatag 29305211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 116 - 274
Target Start/End: Complemental strand, 21310885 - 21310727
Alignment:
Q  116 tgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgta 215  Q
    ||||||||| ||| |  |||| ||| ||||||||| ||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  21310885 tgtattgaaattgcatggactgaataaaagttggtgcacatgttcatacattgcaacttctgactcgtttgtcgcttccatacggacagtattgagtgta 21310786  T
Q  216 agtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttataca 274  Q
    |||||||||||||||||| ||||||||  ||||| ||||||||||||||||||||||||    
T  21310785 agtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttataca 21310727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 91 - 279
Target Start/End: Complemental strand, 21137835 - 21137648
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    ||||||||||| |  ||||||  | ||||||||| ||| |  |||| |||| |||||||||||||||||||||||||||||||||| |||||||| ||||    
T  21137835 taaattgcaaaggcatttaaagaaatgtattgaaattgcattgactgaatgtaagttggtacacatattcatacattgcaacttgtgactcgtttatcgc 21137736  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatag 279  Q
    ||||||||||| ||| ||||| ||||||||||||||||||||| |||||| |  ||||| |||||||||||||||||||||||| ||||    
T  21137735 ttccatacggatagt-ttgagcgtaagtttttagtatgattgaattgtgaacagtttttcctaagaaaaactactatttatacaaatag 21137648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 23511748 - 23511609
Alignment:
Q  133 gacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattg 232  Q
    |||| |||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||| ||||| ||||||||||||||||||||    
T  23511748 gactgaatgtaagttggtacacatattcatacattgcaacttgtgactcgtttatcgcttccatacggatagt-ttgagcgtaagtttttagtatgattg 23511650  T
Q  233 agttgtgacctcttttttctaagaaaaactactatttatac 273  Q
    | ||||||||  ||||| |||||||||||||||||||||||    
T  23511649 aattgtgacccgtttttcctaagaaaaactactatttatac 23511609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 138 - 274
Target Start/End: Complemental strand, 21076693 - 21076558
Alignment:
Q  138 aatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttg 237  Q
    |||| |||||||||||||||||||||||||||||||| | ||||||  |||||||||||||||| | | ||||||||||||||||||||||||||| |||    
T  21076693 aatgtaagttggtacacatattcatacattgcaacttatgactcgtcagtcgcttccatacggataat-ttgagtgtaagtttttagtatgattgaattg 21076595  T
Q  238 tgacctcttttttctaagaaaaactactatttataca 274  Q
    |||||  ||||| ||||||||||||||||||||||||    
T  21076594 tgaccattttttcctaagaaaaactactatttataca 21076558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 138 - 274
Target Start/End: Original strand, 22684640 - 22684776
Alignment:
Q  138 aatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttg 237  Q
    ||||||||||||||||||  ||||||| ||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  22684640 aatgaaagttggtacacaggttcatactttgcaacttgtgactcatttgtcgcttccatacggacagtattgagcgtaagtttttagtatgattgaattg 22684739  T
Q  238 tgacctcttttttctaagaaaaactactatttataca 274  Q
    |||||   |||| ||||  ||||||||||||||||||    
T  22684740 tgaccctgttttcctaaagaaaactactatttataca 22684776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 91 - 199
Target Start/End: Original strand, 22794418 - 22794526
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  ||||||||  | ||| ||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||    
T  22794418 taaattgcaaagatgtttaaagaaatgtcttgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgc 22794517  T
Q  191 ttccatacg 199  Q
    |||||||||    
T  22794518 ttccatacg 22794526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 138 - 279
Target Start/End: Original strand, 4229860 - 4230000
Alignment:
Q  138 aatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttg 237  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| || ||||||| |||| ||| ||||| ||||||| || ||||||| || |||    
T  4229860 aatgtaagttggtacacatattcatacattgcaacttgtgactcgtttatctcttccatgcggatagt-ttgagcgtaagttatttgtatgatagaattg 4229958  T
Q  238 tgacctcttttttctaagaaaaactactatttatacagatag 279  Q
    |||||  ||| | ||| | |||||||||||||||||| ||||    
T  4229959 tgacccttttctcctagggaaaactactatttatacaaatag 4230000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 150 - 279
Target Start/End: Original strand, 21168358 - 21168485
Alignment:
Q  150 tacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttt 249  Q
    ||||||||||||||||||||||||||| |||||||| || ||||||| |||| | | |||||||||||||||| |||||||||| ||||||||  ||||     
T  21168358 tacacatattcatacattgcaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttt-gtatgattgaattgtgaccctttttc 21168455  T
Q  250 tctaagaaaaactactatttatacagatag 279  Q
      ||||||||||||||||||||||| ||||    
T  21168456 gttaagaaaaactactatttatacaaatag 21168485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 146 - 279
Target Start/End: Original strand, 4361651 - 4361784
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||| |||||| |||||||||||| |||||||| || ||||||| |||| | | |||||| ||||||||| |||||||||| ||||||||| |    
T  4361651 ttggtacacatgttcatatattgcaacttgttactcgtttctctcttccatgcggataat-ttgagtataagttttttgtatgattgaattgtgaccttt 4361749  T
Q  246 tttttcta-agaaaaactactatttatacagatag 279  Q
    |||  |||  |||||||||||||||||||| ||||    
T  4361750 tttcgctagggaaaaactactatttatacaaatag 4361784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 273
Target Start/End: Complemental strand, 21550647 - 21550522
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    |||||||||||||||||||||||  |||||| |||||||| || ||   || |||| ||| |||||||||||||||  |||||||||| |||||| |  |    
T  21550647 ttggtacacatattcatacattgtgacttgttactcgtttctctctga-atgcggatagt-ttgagtgtaagttttctgtatgattgaattgtgatccgt 21550550  T
Q  246 tttttctaagaaaaactactatttatac 273  Q
    |||| ||| |||||||||||||||||||    
T  21550549 ttttcctatgaaaaactactatttatac 21550522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 21310499 - 21310450
Alignment:
Q  531 tcacaaatattggctaacaaattgccccccagaaacgttattttcgaact 580  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  21310499 tcacaaatattggctaacaaattgccccccataaacgttatgttcgaact 21310450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 279
Target Start/End: Complemental strand, 27902144 - 27902012
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||| ||||||||||||||||||| |||| ||| || |||||||  ||| | | |||||||||||||||  |||||||||  ||||||||| |    
T  27902144 ttggtacacatgttcatacattgcaacttgtgactcctttctctcttccatgtggataat-ttgagtgtaagttttgtgtatgattggattgtgaccttt 27902046  T
Q  246 tttttctaagaaaaactactatttatacagatag 279  Q
    ||    |  |||||||||||||||||||| ||||    
T  27902045 ttcccttgggaaaaactactatttatacaaatag 27902012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 533 - 580
Target Start/End: Original strand, 22685040 - 22685087
Alignment:
Q  533 acaaatattggctaacaaattgccccccagaaacgttattttcgaact 580  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||    
T  22685040 acaaatattggctaacaaattgccccccagaaacgttacgttcgaact 22685087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 248
Target Start/End: Original strand, 21382054 - 21382155
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||| ||||||||||| ||||||| |||||||| || ||||||| || | | | ||||||||||| |||| |||||||||| | |||||| ||    
T  21382054 ttggtacacatgttcatacattgtaacttgtgactcgtttctctcttccatgcgaataat-ttgagtgtaagctttttgtatgattgaatcgtgacccct 21382152  T
Q  246 ttt 248  Q
    |||    
T  21382153 ttt 21382155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 247
Target Start/End: Complemental strand, 27131831 - 27131731
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||| |||||||| |||||||||| |||||||| || |||||||  ||| | | |||||||||||||||  ||||||| |  |||||||| ||    
T  27131831 ttggtacacatgttcatacagtgcaacttgtgactcgtttctctcttccatgaggataat-ttgagtgtaagttttgtgtatgataggattgtgaccact 27131733  T
Q  246 tt 247  Q
    ||    
T  27131732 tt 27131731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 266
Target Start/End: Original strand, 2603493 - 2603613
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgt-aactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctc 244  Q
    |||||| |||| ||||||||||||||||||| | ||||||| || ||||||| |||| | | |||||| ||||||||| |||||||||| |||| |||      
T  2603493 ttggtatacatgttcatacattgcaacttgtgatctcgtttctctcttccatgcggataat-ttgagtttaagttttt-gtatgattgaattgtaaccct 2603590  T
Q  245 ttttttcta-agaaaaactacta 266  Q
    ||||  ||| |||||||||||||    
T  2603591 ttttccctacagaaaaactacta 2603613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 434; Significance: 0; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 434; E-Value: 0
Query Start/End: Original strand, 9 - 549
Target Start/End: Complemental strand, 18108953 - 18108417
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    ||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  18108953 aatccgtgttgaattcaattgaagttctgtaaataatagcaatgaaaagaagtactttgaaaagacttaataaaacaagacttaaattgcaaaagtgttt 18108854  T
Q  109 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtatt 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18108853 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtatt 18108754  T
Q  209 gagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 308  Q
    ||||||||||||||||||||||||| ||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18108753 gagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 18108654  T
Q  309 aatc-aaaatcgaaactagccgttcacaaactagtcgtttgctaaccgcttggtcttatcaataaaacctgaagagcgcgtcgacaacttctttcatccg 407  Q
    | || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||     |||||||||||||||||||||||| |||||    
T  18108653 attcaaaaatcgaaactagccgttcacaaactagccgtttgctaaccgcttggtcttatccacaa-----gaagagcgcgtcgacaacttcttttatccg 18108559  T
Q  408 tcgaactaaaaacaacgtcttcgattcctgctgaagtacacttgtatttttcgatggatttccttcacaaagctacgccccatttttacgtcaaaccctt 507  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  18108558 tcgaactaaaaacaacttcttcgattcctgctgaagtacacttgtatttttcgatggatttctttcacaaagctacgccccatttttaggtcaaaccctt 18108459  T
Q  508 gactgcattaaatgctcatgttctcacaaatattggctaaca 549  Q
    |||||||||||||| |||| ||||||||||||||||||||||    
T  18108458 gactgcattaaatgatcatattctcacaaatattggctaaca 18108417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 68 - 631
Target Start/End: Original strand, 13277152 - 13277693
Alignment:
Q  68 aaaagacttagtaaaataagacttaaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacatt 167  Q
    |||||||||| | ||| ||||||||||||||||| |||||||||  | ||||||||||||||||||| ||||||||| ||||| ||||||||||||| ||    
T  13277152 aaaagacttaatgaaa-aagacttaaattgcaaaggtgtttaaagaactgtattgaatttgtaaagatttaatgaaaattggtgcacatattcatacttt 13277250  T
Q  168 gcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactat 267  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||    
T  13277251 gcaactcgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacctgtttttcctaagaaaaactactat 13277350  T
Q  268 ttatacagatagtcctataactacctaatcacatcctttcgaatc-aaaatcgaaactagccgttcacaaactagtcgtttgctaaccgcttggtcttat 366  Q
    ||||||| ||| |||||||||| ||| |||| |||  ||||| |  ||||||||||||||||||                ||||||| ||||| ||||||    
T  13277351 ttatacaaataatcctataactgcctgatcatatctgttcgatttgaaaatcgaaactagccgt----------------tgctaactgcttgatcttat 13277434  T
Q  367 caataaaac-ctgaagagcgcgtcgacaacttctttcatccgtcgaactaaaaacaacgtcttcgattcctgctgaagtacacttgtatttttcgatgga 465  Q
    | | ||||  |||||| | || |||| |||||| || |||| || |||||||| |  | |||||||||||| ||||||   |  | |||||| |||| ||    
T  13277435 ccacaaaagtctgaag-gtgcttcgataacttcgtttatccatcaaactaaaa-cggcttcttcgattcctactgaag---atatatatttt-cgataga 13277528  T
Q  466 tttccttcacaaagctacgccc--catttttacgtcaaacccttgactgcattaaatgctcatgttctcacaaatattggctaacaaattgccccccaga 563  Q
    || |||||||||||||| | ||  | | |||| ||||||||||||||||||||||||| |  | || |||||||||| ||||||||||||||||||||||    
T  13277529 tt-ccttcacaaagctaagtccatcttctttatgtcaaacccttgactgcattaaatgatagtattttcacaaatatcggctaacaaattgccccccaga 13277627  T
Q  564 aacgttattttcgaactttctctccatttaggagaaacttgacgtttctgaaattttttcgataaagt 631  Q
    |||||||| || ||||| | | || | | | |||||||||||||||||||||| ||||||||||||||    
T  13277628 aacgttatgtttgaactctttttcga-tcaagagaaacttgacgtttctgaaa-tttttcgataaagt 13277693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 116 - 331
Target Start/End: Original strand, 14556908 - 14557124
Alignment:
Q  116 tgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgta 215  Q
    ||||||||||||||||||||||||||||||||| | |||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14556908 tgtattgaatttgtaaagacttaatgaaagttgatgcacagattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgta 14557007  T
Q  216 agtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcga-atcaa 314  Q
    | |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||  |||||  | ||    
T  14557008 attttttagtatgattgaattgtgacctgttttttctaagaaaaactactatttatacaaatagtcctataactacctaatcatatctgttcgatttgaa 14557107  T
Q  315 aatcgaaactagccgtt 331  Q
    ||||||| |||||||||    
T  14557108 aatcgaacctagccgtt 14557124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 147; E-Value: 5e-77
Query Start/End: Original strand, 116 - 298
Target Start/End: Original strand, 15153596 - 15153778
Alignment:
Q  116 tgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgta 215  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15153596 tgtattgaatttgtaaagacttaatgaaagttggtgcacagattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgta 15153695  T
Q  216 agtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatca 298  Q
    | ||||||||||||| || ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15153696 attttttagtatgatcgaattgtgacctgttttttctaagaaaaactactatttatacaaatagtcctataactacctaatca 15153778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 85 - 331
Target Start/End: Original strand, 13292546 - 13292793
Alignment:
Q  85 aagacttaaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtt 184  Q
    ||||||||||||||||| |||||||||  | ||||||||||||||||||| ||||||||| ||||| ||||||||||||| |||||||| || |||||||    
T  13292546 aagacttaaattgcaaaggtgtttaaagaactgtattgaatttgtaaagatttaatgaaaattggtgcacatattcatactttgcaactcgtgactcgtt 13292645  T
Q  185 tgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtccta 284  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||| |||||||||||||||||||||||| ||| |||||    
T  13292646 tgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacatgtttttcctaagaaaaactactatttatacaaataatccta 13292745  T
Q  285 taactacctaatcacatcctttcga-atcaaaatcgaaactagccgtt 331  Q
    ||||| ||| |||| |||  |||||  | |||| ||||||||||||||    
T  13292746 taactgcctgatcatatctgttcgatttgaaaagcgaaactagccgtt 13292793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 91 - 270
Target Start/End: Original strand, 14714099 - 14714278
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  ||||||||  | ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||    
T  14714099 taaattgcaaagatgtttaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgc 14714198  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactattta 270  Q
    |||||||||||||||||| ||||||| |||||||||||||||| ||||||||  ||||| ||||||||||||||||||||    
T  14714199 ttccatacggacagtattaagtgtaaatttttagtatgattgaattgtgacccgtttttcctaagaaaaactactattta 14714278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 91 - 270
Target Start/End: Original strand, 14775779 - 14775958
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  ||||||||  | ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||    
T  14775779 taaattgcaaagatgtttaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgc 14775878  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactattta 270  Q
    |||||||||||||||||| ||||||| |||||||||||||||| ||||||||  ||||| ||||||||||||||||||||    
T  14775879 ttccatacggacagtattaagtgtaaatttttagtatgattgaattgtgacccgtttttcctaagaaaaactactattta 14775958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 138 - 274
Target Start/End: Original strand, 14022430 - 14022565
Alignment:
Q  138 aatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttg 237  Q
    |||| ||||| |||||||||||||||||||||||||||| ||||||  || ||||| ||||||||| | ||||||||||||||||||||||||||| |||    
T  14022430 aatgtaagttagtacacatattcatacattgcaacttgtgactcgtcagttgcttctatacggacaat-ttgagtgtaagtttttagtatgattgaattg 14022528  T
Q  238 tgacctcttttttctaagaaaaactactatttataca 274  Q
    |||||  ||||| |||| |||||||||||||||||||    
T  14022529 tgacccttttttcctaaaaaaaactactatttataca 14022565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 138 - 279
Target Start/End: Original strand, 3077947 - 3078086
Alignment:
Q  138 aatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttg 237  Q
    |||| ||||||||||||| ||||||||||| ||||||||  ||||||| | ||||||||||||| | | |||||  ||||||||| |||||||||| |||    
T  3077947 aatgtaagttggtacacagattcatacattacaacttgtggctcgtttcttgcttccatacggataat-ttgagcttaagttttt-gtatgattgaattg 3078044  T
Q  238 tgacctcttttttctaagaaaaactactatttatacagatag 279  Q
    |||||| |||||||||||||||||||||||||||||| ||||    
T  3078045 tgaccttttttttctaagaaaaactactatttatacaaatag 3078086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 138 - 274
Target Start/End: Complemental strand, 1658718 - 1658583
Alignment:
Q  138 aatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttg 237  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| || ||||||| |||| | | |||||||||||||||| ||||||| || |||    
T  1658718 aatgtaagttggtacacatattcatacattgcaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttt-gtatgatagaattg 1658621  T
Q  238 tgac-ctcttttttctaagaaaaactactatttataca 274  Q
    |||| || ||||  ||||| ||||||||| ||||||||    
T  1658620 tgacacttttttccctaaggaaaactactgtttataca 1658583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 500 - 660
Target Start/End: Original strand, 14557235 - 14557392
Alignment:
Q  500 aaacccttgactgcattaaatgctcatgttctcacaaatattggctaacaaattgccccccagaaacgttattttcgaactttctctccatttaggagaa 599  Q
    |||| ||||||||||||||||| |  |||| |||||||||| |||||||||||||||||||||||||||||| ||  |||| | |  ||  | |||||||    
T  14557235 aaactcttgactgcattaaatgatagtgttttcacaaatatcggctaacaaattgccccccagaaacgttatgtttaaactct-ttaccgatcaggagaa 14557333  T
Q  600 acttgacgtttctgaaattttttcgataaagtgcaattcctcagcatgacatcattctttt 660  Q
    |||||| |||| ||||  |||||||||||| ||  | ||||||||||||||||||||||||    
T  14557334 acttgatgtttttgaa--tttttcgataaaatgtgactcctcagcatgacatcattctttt 14557392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 146 - 279
Target Start/End: Original strand, 18567017 - 18567147
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||||||||| ||||||||||||| |||||||| || ||||||| |||  | | |||||||||||||||| ||||||| || ||||||||| |    
T  18567017 ttggtacacatattcattcattgcaacttgtgactcgtttctctcttccatgcgggtaat-ttgagtgtaagttttt-gtatgatagaattgtgacct-t 18567113  T
Q  246 tttttctaagaaaaactactatttatacagatag 279  Q
    |||||||| | |||||||||||||||||| ||||    
T  18567114 tttttctagggaaaactactatttatacaaatag 18567147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 497 - 631
Target Start/End: Original strand, 14714470 - 14714604
Alignment:
Q  497 gtcaaacccttgactgcattaaatgctcatgttctcacaaatattggctaacaaattgccccccagaaacgttattttcgaact-ttctctccatttagg 595  Q
    |||||||| |||||||||||||||| |  | || ||||||||||||||||||||||||||| ||||||||||||| || |||||  ||| || | | | |    
T  14714470 gtcaaacctttgactgcattaaatgatactcttttcacaaatattggctaacaaattgcccgccagaaacgttatgtttgaactcgtctttcga-tcaag 14714568  T
Q  596 agaaacttgacgtttctgaaattttttcgataaagt 631  Q
    |||||||||||||||||||||  || ||||||||||    
T  14714569 agaaacttgacgtttctgaaaaattgtcgataaagt 14714604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 146 - 274
Target Start/End: Complemental strand, 10267346 - 10267220
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||| ||||||||||||||||||| | |||||| || ||||||| |||| | | |||||||||||||||| |||||||||| || ||||| ||    
T  10267346 ttggtacacatgttcatacattgcaacttgtgattcgtttctctcttccatgcggataat-ttgagtgtaagttttt-gtatgattgaattttgaccact 10267249  T
Q  246 tttttctaagaaaaactactatttataca 274  Q
    |||   || | ||||||||||||||||||    
T  10267248 tttccttagggaaaactactatttataca 10267220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 146 - 279
Target Start/End: Original strand, 31079772 - 31079906
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||| |||| ||||||||| |||| |||||||| || ||||||| |||| | | |||||||||||||||| |||||||||| |||||||| ||    
T  31079772 ttggtacacatgttcacacattgcaatttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgtgacccct 31079870  T
Q  246 tttttctaagaa--aaactactatttatacagatag 279  Q
    |||| ||  | |  ||||||||||||||||| ||||    
T  31079871 ttttcctttggaggaaactactatttatacaaatag 31079906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 724 - 822
Target Start/End: Original strand, 13277798 - 13277897
Alignment:
Q  724 attgggaaccatcaaaaaacaacttttccatgcaatgattgacatctgtccagtatcaaaagctatgtatggccctga-gtcatacttttactcttactt 822  Q
    |||||||||||||||||||||||| ||||| || ||| |||||||||||| |  |||||| ||||| |||| || | | |||||||||||||||| ||||    
T  13277798 attgggaaccatcaaaaaacaactgttccacgcgatggttgacatctgtcaaacatcaaaggctatatatgacctttaggtcatacttttactctcactt 13277897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 497 - 549
Target Start/End: Original strand, 15154001 - 15154053
Alignment:
Q  497 gtcaaacccttgactgcattaaatgctcatgttctcacaaatattggctaaca 549  Q
    ||||||||||||||||||||||||| |  |||| |||||||||| ||||||||    
T  15154001 gtcaaacccttgactgcattaaatgatagtgttttcacaaatatcggctaaca 15154053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 272
Target Start/End: Original strand, 49526474 - 49526601
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgc-ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctc 244  Q
    ||||||||||| ||||||||||||||||||| |||||||| || | ||  || |||| ||| |||| ||||||||||  |||||||||  |||| |||      
T  49526474 ttggtacacatgttcatacattgcaacttgtgactcgtttctctctttgaatgcggatagt-ttgattgtaagttttgtgtatgattggattgtcaccct 49526572  T
Q  245 ttttttctaa-gaaaaactactatttata 272  Q
    ||||  |||| ||||||||||||||||||    
T  49526573 ttttccctaaggaaaaactactatttata 49526601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 492 - 550
Target Start/End: Original strand, 13292934 - 13292992
Alignment:
Q  492 tttacgtcaaacccttgactgcattaaatgctcatgttctcacaaatattggctaacaa 550  Q
    |||| ||||||||||||||||||||||||| |  | || |||||||||| |||||||||    
T  13292934 tttaggtcaaacccttgactgcattaaatgatagtcttttcacaaatatcggctaacaa 13292992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 724 - 817
Target Start/End: Original strand, 14557465 - 14557557
Alignment:
Q  724 attgggaaccatcaaaaaacaacttttccatgcaatgattgacatctgtccagtatcaaaagctatgtatggccctgagtcatacttttactct 817  Q
    |||||||||  ||||||| ||||| |||||||| ||||||||||||||||  | |||||| ||||| |||| || |  |||||| |||||||||    
T  14557465 attgggaactgtcaaaaa-caactgttccatgcgatgattgacatctgtcaggcatcaaaggctatatatgaccttaggtcatatttttactct 14557557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 187
Target Start/End: Original strand, 27812325 - 27812366
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgt 187  Q
    |||||| |||||||||||||||||||||||| ||| ||||||    
T  27812325 ttggtagacatattcatacattgcaacttgtgacttgtttgt 27812366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 410; Significance: 0; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 410; E-Value: 0
Query Start/End: Original strand, 9 - 549
Target Start/End: Original strand, 16667828 - 16668369
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    ||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  16667828 aatccgtgttgaattcaatcgaagttctgtaaataacaataatgaaaagaagtactttgaaaagacttagtaaaacaagacttaaattgcaaaagtattt 16667927  T
Q  109 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtatt 208  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  16667928 aaaagattgtattgaatttgtaaagacttaataaaagttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatatggacagtatt 16668027  T
Q  209 gagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 308  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  16668028 gagtgtaagtttttagtatgattgaattgtgaccactttttcctaagaaaaactactatttatacagatagtcctattactacctaatcacatcgtttcg 16668127  T
Q  309 aatcaaaatcgaaactagccgttcac-aaactagtcgtttgctaaccgcttggtcttatcaataaaacctgaagagcgcgtcgacaacttctttcatccg 407  Q
    | |||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||   || ||||||| ||||||||||||||||||||||||||    
T  16668128 attcaaaatcgaaactagccgttcacaaaactagccgtttgctaactgcttggtcttatccgcaagacctgaatagcgcgtcgacaacttctttcatccg 16668227  T
Q  408 tcgaactaaaaacaacgtcttcgattcctgctgaagtacacttgtatttttcgatggatttccttcacaaagctacgccccatttttacgtcaaaccctt 507  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||||||||||||||||||||| ||| ||||||| |||||||| |||| |||||||||||    
T  16668228 tcgaactagaaacaacgttttcgattcctgctgaagcacatttgtatttttcgatggatttctttctcaaagcttcgccccatctttaggtcaaaccctt 16668327  T
Q  508 gactgcattaaatgctcatgttctcacaaatattggctaaca 549  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  16668328 gactgcattaaatgctcatattctcacaaatattggctaaca 16668369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 9 - 552
Target Start/End: Original strand, 17425970 - 17426511
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    ||||||||||| || |||||||| ||||||||||||| ||| | ||| |||||||||||||| |||||||||||| ||||||| |||| |||||||||||    
T  17425970 aatccgtgttgaatccaatcgaaattctgtaaataatgacagtaaaaggaagtactttgaaaggacttagtaaaacaagacttgaattacaaaagtgttt 17426069  T
Q  109 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtatt 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  17426070 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtatt 17426169  T
Q  209 gagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 308  Q
    ||||||||||||||||||||||||| ||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17426170 gagtgtaagtttttagtatgattgaattgtgacccatttttcctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 17426269  T
Q  309 aatc-aaaatcgaaactagccgttcacaaactagtcgtttgctaaccgcttggtcttatcaataaaacctgaagagcgcgtcgacaacttctttcatccg 407  Q
    | || ||||||||| ||||||||||  ||||||| ||||||||||||||||||||||||| | || |||||||| ||||||| ||| |||||||||||||    
T  17426270 attcaaaaatcgaatctagccgttcgaaaactagccgtttgctaaccgcttggtcttatccacaagacctgaag-gcgcgtctacagcttctttcatccg 17426368  T
Q  408 tcgaactaaaaacaacgtcttcgattcctgctgaagtacacttgtatttttcgatggatttccttcacaaagctacgccccatttttacgtcaaaccctt 507  Q
    ||||||| |||||| | ||||||||||||||||| |||||| ||||||| |||||| |||| |||||||||||||||||| ||||||  |||||||||||    
T  17426369 tcgaact-aaaacagcttcttcgattcctgctgaggtacacatgtatttgtcgatgaattt-cttcacaaagctacgccctatttttgggtcaaaccctt 17426466  T
Q  508 gactgcattaaatgctcatgttctcacaaatattggctaacaaat 552  Q
    || ||||||||||| |||| ||||||||||||||| |||||||||    
T  17426467 gagtgcattaaatgatcatattctcacaaatattgactaacaaat 17426511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 9 - 549
Target Start/End: Original strand, 20193028 - 20193567
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    |||||| |||| || |||||||| ||||||||||||||||| |  || ||||||||||||||||||||||||||  ||||||| |||| |||||||||||    
T  20193028 aatccgagttgaatccaatcgaaattctgtaaataataacagtagaaggaagtactttgaaaagacttagtaaaccaagacttgaattacaaaagtgttt 20193127  T
Q  109 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtatt 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  20193128 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtatt 20193227  T
Q  209 gagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 308  Q
    ||||||||||||||||||||| ||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20193228 gagtgtaagtttttagtatgactgaattgtgacccattttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 20193327  T
Q  309 aatc-aaaatcgaaac-tagccgttcacaaactagtcgtttgctaaccgcttggtcttatcaataaaacctgaagagcgcgtcgacaacttctttcatcc 406  Q
    | || ||||||||||| |||||||||  ||||||| ||||||||||||||||||||||||| |  | || ||||| ||||||| ||| ||||||||||||    
T  20193328 attcaaaaatcgaaacttagccgttcgaaaactagccgtttgctaaccgcttggtcttatctaccagacttgaag-gcgcgtctacagcttctttcatcc 20193426  T
Q  407 gtcgaactaaaaacaacgtcttcgattcctgctgaagtacacttgtatttttcgatggatttccttcacaaagctacgccccatttttacgtcaaaccct 506  Q
    |||||||| |||||| | ||||||||||| ||||| |||||  |||||||  |||||||||| |||||||||||||||||||| ||||  ||||||||||    
T  20193427 gtcgaact-aaaacagcttcttcgattcccgctgaggtacatatgtatttgccgatggattt-cttcacaaagctacgccccaattttgggtcaaaccct 20193524  T
Q  507 tgactgcattaaatgctcatgttctcacaaatattggctaaca 549  Q
    ||||||||||||||| |||| || |||||||||||| ||||||    
T  20193525 tgactgcattaaatgatcatattttcacaaatattgactaaca 20193567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 260 - 829
Target Start/End: Complemental strand, 1735315 - 1734755
Alignment:
Q  260 actactatttatacagatagtcctataactacctaatcacatcctttcgaatcaaaatcgaaactagccgttcacaaactagtcgtttgctaaccgcttg 359  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||| |||||||||||  ||||||| |||||||||||||||||    
T  1735315 actactatttatacagatagtcctataactacctaatcatatcctt-cgattcaaaatcgagactagccgttcg-aaactagccgtttgctaaccgcttg 1735218  T
Q  360 gtcttatcaataaaacctgaagagcgcgtcgacaacttctttcatccgtcgaactaaaaacaacgtcttcgattcctgctgaagtacacttgtatttttc 459  Q
    | |||||| | ||||| || |  |||||||||||||||| || |   ||||||| |||| | || |||||||||||| |||||||| | |||||||||||    
T  1735217 gccttatccaaaaaacttggaaggcgcgtcgacaacttcctttacttgtcgaacaaaaacccac-tcttcgattccttctgaagtagatttgtatttttc 1735119  T
Q  460 gatggatttccttcacaaagctacgccccatttttacgtcaaacccttgactgcattaaatgctcatgttctcacaaatattggctaacaaattgccccc 559  Q
    ||||||||   | ||||||||||||| ||||||||  ||||||||||||||||||||||||| |||| || | |||||||||||||||||||||||||||    
T  1735118 gatggattctgtccacaaagctacgctccattttttggtcaaacccttgactgcattaaatgatcatatttttacaaatattggctaacaaattgccccc 1735019  T
Q  560 cagaaacgttattttcgaactttc-tctcca--tttaggagaaacttgacgtttctgaaattttttcgataaagtgcaattcctcagcatgacatcattc 656  Q
    |||||||||||| ||||||||||| ||| ||  ||||||||||||||||||||||||||        || ||  ||  | ||||||||||||||||||||    
T  1735018 cagaaacgttatgttcgaactttcttcttcaattttaggagaaacttgacgtttctgaa--------gaaaacatgtgactcctcagcatgacatcattc 1734927  T
Q  657 ttttgacaacgggatatttcaaaaggtgcagaaccgtcttcataaggacttagtgggccataccgtcattgggaaccatcaaaaaacaacttttccatgc 756  Q
    ||||| |||| ||||||||||| | ||| ||||||||| |||||| ||||||||||||||||| ||| ||||||| |||| |||||||||| ||||| ||    
T  1734926 ttttggcaacaggatatttcaagaagtgtagaaccgtcatcataaagacttagtgggccatactgtcgttgggaatcatc-aaaaacaactattccacgc 1734828  T
Q  757 aatgattgacatctgtccagtatcaaaagctatgtatggccctgagtcatacttttactcttacttcatttct 829  Q
     |||||||||||||||||| ||||||||||||| |||| | ||||||||||||||| |||||||||| |||||    
T  1734827 gatgattgacatctgtccaatatcaaaagctatatatgactctgagtcatacttttgctcttacttcgtttct 1734755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 91 - 298
Target Start/End: Original strand, 22351969 - 22352176
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  ||||||||  | |||||||||||| |||||||||||||||| |||||  |||||||||||| ||||||||||| |||||||||||||    
T  22351969 taaattgcaaagatgtttaaagaaatgtattgaatttataaagacttaatgaaaattggtggacatattcatactttgcaacttgtgactcgtttgtcgc 22352068  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataacta 290  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||||| |||||||||||||||    
T  22352069 ttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatacaaatagtcctataacta 22352168  T
Q  291 cctaatca 298  Q
    ||||||||    
T  22352169 cctaatca 22352176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 91 - 309
Target Start/End: Original strand, 12821178 - 12821396
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  ||||||||| | ||||||||  ||| |||||| |||||||| ||||| ||||||||||||| ||||||||| | |||||||||||||    
T  12821178 taaattgcaaagatgtttaaaaaaatgtattgacattgcaaagacataatgaaaattggtgcacatattcatactttgcaacttatgactcgtttgtcgc 12821277  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataacta 290  Q
    |||||||||||||||||||| |||||||||| ||||||||||| ||||||| | ||||| |||||||||||| ||||||||||| |||| ||||||||||    
T  12821278 ttccatacggacagtattgattgtaagttttgagtatgattgaattgtgacatgtttttcctaagaaaaactgctatttatacaaatagacctataacta 12821377  T
Q  291 cctaatcacatcctttcga 309  Q
    |||| |||||||| |||||    
T  12821378 cctagtcacatccattcga 12821396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 25388963 - 25389141
Alignment:
Q  116 tgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgta 215  Q
    ||||||||| ||||||||| ||||||||| ||||| ||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25388963 tgtattgaaattgtaaagatttaatgaaaattggtgcacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgta 25389062  T
Q  216 agtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactaccta 294  Q
    |||||| ||||||||||| ||||||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||    
T  25389063 agttttgagtatgattgaattgtgaccaatttttcctaagaaaaactactatttatacaaatagacctataactaccta 25389141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 116 - 274
Target Start/End: Complemental strand, 22064743 - 22064585
Alignment:
Q  116 tgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgta 215  Q
    ||||||||| ||| |  |||| ||| ||||||||| ||||  ||||||||||||||||||| ||||||||||||||||||||||||||  ||| ||||||    
T  22064743 tgtattgaaattgcattgactgaataaaagttggtgcacacgttcatacattgcaacttgtgactcgtttgtcgcttccatacggacatcattaagtgta 22064644  T
Q  216 agtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttataca 274  Q
    |||||||||||||||||| ||||||||  ||||| ||||||||||||||||||||||||    
T  22064643 agtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttataca 22064585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 138 - 279
Target Start/End: Original strand, 29708170 - 29708310
Alignment:
Q  138 aatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttg 237  Q
    |||| |||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||| |||| | ||||| ||||||||||||||||||||| |||    
T  29708170 aatgtaagttggtgcacatattcatacattgcaacttgtgactcgttagtcgcttccatacagacaat-ttgagcgtaagtttttagtatgattgaattg 29708268  T
Q  238 tgacctcttttttctaagaaaaactactatttatacagatag 279  Q
    |||||  ||||| |||||||||||||||||||||||||||||    
T  29708269 tgacccgtttttcctaagaaaaactactatttatacagatag 29708310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 143 - 279
Target Start/End: Original strand, 41438853 - 41438988
Alignment:
Q  143 aagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacc 242  Q
    ||||||||| |||||||||||||||||||||||| |||||||  ||||||||||||||| | | ||||| ||||||||||||||||||||| ||||||||    
T  41438853 aagttggtatacatattcatacattgcaacttgtgactcgttcatcgcttccatacggatatt-ttgagcgtaagtttttagtatgattgaattgtgacc 41438951  T
Q  243 tcttttttctaagaaaaactactatttatacagatag 279  Q
      ||||| |||||||||||||||||||||||||||||    
T  41438952 cttttttcctaagaaaaactactatttatacagatag 41438988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 146 - 279
Target Start/End: Original strand, 22698110 - 22698242
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||| ||||||||||||||||||| |||||||| || ||||||| |||| | | |||||||||||||||| ||||||| || ||||||||  |    
T  22698110 ttggtacacatgttcatacattgcaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgatagaattgtgaccctt 22698208  T
Q  246 tttttctaagaaaaactactatttatacagatag 279  Q
    |||| ||| | |||||||||||||||||| ||||    
T  22698209 ttttcctagggaaaactactatttatacaaatag 22698242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 146 - 279
Target Start/End: Complemental strand, 18735495 - 18735364
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    |||||||| |||||||||||||||||||||| |||||||| |  ||||||| |||| | | |||||||||||||||| |||||||||| |||||||| ||    
T  18735495 ttggtacagatattcatacattgcaacttgtgactcgtttctttcttccatgcggataat-ttgagtgtaagttttt-gtatgattgaattgtgacc-ct 18735399  T
Q  246 tttttc-taagaaaaactactatttatacagatag 279  Q
    |||||| ||||| ||||||||||||||||| ||||    
T  18735398 tttttcttaagagaaactactatttatacaaatag 18735364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 146 - 279
Target Start/End: Complemental strand, 15337437 - 15337305
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||| ||||||||||||||||||| |||||||  || ||||||| |||| | | |||||||||||||||| ||||||| || |||||| || |    
T  15337437 ttggtacacatgttcatacattgcaacttgtgactcgttgctctcttccatgcggataat-ttgagtgtaagttttttgtatgatagaattgtgatcttt 15337339  T
Q  246 tttttctaagaaaaactactatttatacagatag 279  Q
    |||  ||| | |||||||||||||||||| ||||    
T  15337338 tttccctagggaaaactactatttatacaaatag 15337305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 146 - 279
Target Start/End: Complemental strand, 15426502 - 15426370
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||| ||||||||||||||||||| |||||||  || ||||||| |||| | | |||||||||||||||| ||||||| || |||||| || |    
T  15426502 ttggtacacatgttcatacattgcaacttgtgactcgttgctctcttccatgcggataat-ttgagtgtaagttttttgtatgatagaattgtgatcttt 15426404  T
Q  246 tttttctaagaaaaactactatttatacagatag 279  Q
    |||  ||| | |||||||||||||||||| ||||    
T  15426403 tttccctagggaaaactactatttatacaaatag 15426370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 146 - 279
Target Start/End: Complemental strand, 15517806 - 15517674
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||| ||||||||||||||||||| |||||||  || ||||||| |||| | | |||||||||||||||| ||||||| || |||||| || |    
T  15517806 ttggtacacatgttcatacattgcaacttgtgactcgttgctctcttccatgcggataat-ttgagtgtaagttttttgtatgatagaattgtgatcttt 15517708  T
Q  246 tttttctaagaaaaactactatttatacagatag 279  Q
    |||  ||| | |||||||||||||||||| ||||    
T  15517707 tttccctagggaaaactactatttatacaaatag 15517674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 146 - 273
Target Start/End: Complemental strand, 15911838 - 15911712
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||| ||||||||||| ||||||| |||||||| || |||  || |||| ||| |||||||||||||||  |||||||||  ||||||||| |    
T  15911838 ttggtacacatgttcatacattgtaacttgtgactcgtttctctcttgaatgcggatagt-ttgagtgtaagttttgtgtatgattggtttgtgacctat 15911740  T
Q  246 tttttctaagaaaaactactatttatac 273  Q
    |||   || |||||||||||||||||||    
T  15911739 tttccttatgaaaaactactatttatac 15911712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 273
Target Start/End: Complemental strand, 27818315 - 27818187
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacag-tattgagtgtaagtttttagtatgattgagttgtgacctc 244  Q
    ||||||||||| ||||||||||||||||||| |||||||| || ||| |||| ||| || | || ||||||||||||  |||| ||||  |||||||| |    
T  27818315 ttggtacacatgttcatacattgcaacttgtgactcgtttctctcttgcatatggatagtttttaagtgtaagttttgtgtatcattggattgtgacc-c 27818217  T
Q  245 ttttttctaa-gaaaaactactatttatac 273  Q
     |||  |||| |||||||||||||||||||    
T  27818216 ctttccctaaggaaaaactactatttatac 27818187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 207 - 273
Target Start/End: Complemental strand, 16778013 - 16777947
Alignment:
Q  207 ttgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatac 273  Q
    |||||||||||||||  |||||||||| |||||| |  ||||| ||| ||||||||| |||||||||    
T  16778013 ttgagtgtaagttttctgtatgattgaattgtgatccgtttttcctatgaaaaactattatttatac 16777947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 352; Significance: 0; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 9 - 551
Target Start/End: Complemental strand, 5891 - 5351
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    ||||||||||| || |||||||| ||||||||||||| ||| | ||| |||||||||||||| |||||||||||| ||||||| |||| |||||||||||    
T  5891 aatccgtgttgaatccaatcgaaattctgtaaataatgacagtaaaaggaagtactttgaaaggacttagtaaaacaagacttgaattacaaaagtgttt 5792  T
Q  109 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtatt 208  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||    
T  5791 aaaagattgtattgaatttttaaagacttaatgaaagttggtacacatattcatactttacaacttgtgactcgtttgtcgcttccatacggacagtatt 5692  T
Q  209 gagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 308  Q
    ||||||||||||||||||||||||| ||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5691 gagtgtaagtttttagtatgattgaattgtgacccatttttcctaagaaaaactactatttatacagatagtcctataactacctaatcccatcctttcg 5592  T
Q  309 aatc-aaaatcgaaactagccgttcacaaactagtcgtttgctaaccgcttggtcttatcaataaaacctgaagagcgcgtcgacaacttctttcatccg 407  Q
    | || ||||||||||||||||||||  |||||||  |||||||||||||||||||||||| | || || ||||| |||||||||||||||||||||||||    
T  5591 attcaaaaatcgaaactagccgttcgaaaactagctgtttgctaaccgcttggtcttatccacaagacatgaag-gcgcgtcgacaacttctttcatccg 5493  T
Q  408 tcgaactaaaaacaacgtcttcgattcctgctgaagtacacttgtatttttcgatggatttccttcacaaagctacgccccatttttacgtcaaaccctt 507  Q
    ||||||| |||||| | |||||||||||| |||| |||||| ||||||| ||||||||||| |||||||||||||||||||||||||  |||||||||||    
T  5492 tcgaact-aaaacagcttcttcgattcctactgaggtacacatgtatttgtcgatggattt-cttcacaaagctacgccccatttttgggtcaaaccctt 5395  T
Q  508 gactgcattaaatgctcatgttctcacaaatattggctaacaaa 551  Q
    |||||||||||||| |||| ||||||||||||||| ||||||||    
T  5394 gactgcattaaatgatcatattctcacaaatattgactaacaaa 5351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 333; Significance: 0; HSPs: 4)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 9 - 547
Target Start/End: Original strand, 28401 - 28921
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    ||||||||||| || |||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28401 aatccgtgttgaatccaatcgaaattctgtaaataataacaataaaaggaagtactttgaaaagacttagtaaaacaagacttaaattgcaaaagtgttt 28500  T
Q  109 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtatt 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||    
T  28501 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacgggcagtatt 28600  T
Q  209 gagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 308  Q
    | ||||||||||||||||||||||| || ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28601 gtgtgtaagtttttagtatgattgaattatgacccctttttcctaagaaaaactactatttatacagatagtcctataactacctaatcgcatcctttcg 28700  T
Q  309 aatcaaaatcgaaactagccgttcacaaactagtcgtttgctaaccgcttggtcttatcaataaaacctgaagagcgcgtcgacaacttctttcatccgt 408  Q
    | |||||||||||||||||               | ||||||||||||||||||||||  | || |||||||| ||||||||||||||||||||||| ||    
T  28701 attcaaaatcgaaactagc---------------catttgctaaccgcttggtcttattcacaagacctgaag-gcgcgtcgacaacttctttcatctgt 28784  T
Q  409 cgaactaaaaacaacgtcttcgattcctgctgaagtacacttgtatttttcgatggatttccttcacaaagctacgccccatttttacgtcaaacccttg 508  Q
    |||||| |||| | | ||||||||||||||||| |||||| ||||||| ||||||||||| |||||||||||||  ||||||||||| ||||||||||||    
T  28785 cgaact-aaaatagcttcttcgattcctgctgaggtacacatgtatttgtcgatggattt-cttcacaaagctaaaccccatttttaggtcaaacccttg 28882  T
Q  509 actgcattaaatgctcatgttctcacaaatattggctaa 547  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  28883 actgcattaaatgatcatattctcacaaatattggctaa 28921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 9 - 331
Target Start/End: Complemental strand, 40117 - 39796
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaa-gtgtt 107  Q
    ||||||||||| || |||||||| ||||||||| ||| |||||  ||  || ||||| ||||||||||| |||||  ||||||||||||||||| |||||    
T  40117 aatccgtgttgaatccaatcgaaattctgtaaagaatgacaatagaagaaaatacttcgaaaagacttaataaaa--agacttaaattgcaaaaagtgtt 40020  T
Q  108 taaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtat 207  Q
    |||| || ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||    
T  40019 taaaggactgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacttcgcaacttgtgactcgtttgtcgcttccatacggacagtat 39920  T
Q  208 tgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttc 307  Q
    ||||||||||||||| |||||||||| ||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||  ||     
T  39919 tgagtgtaagttttttgtatgattgaattgtgacctgtttttcctaagaaaaactactatttatacagataatcctataactacctaatcatatctgttt 39820  T
Q  308 gaatcaaaatcgaaactagccgtt 331  Q
    || |||||||||||||||||||||    
T  39819 gattcaaaatcgaaactagccgtt 39796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 91 - 294
Target Start/End: Original strand, 29295 - 29498
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  ||||||||  | ||||||||  ||| ||||||||||||||| ||||| ||||||||||||| || |||||||| |||||||||||||    
T  29295 taaattgcaaagatgtttaaagaaatgtattgacattgcaaagacttaatgaaaattggtgcacatattcatacttttcaacttgtgactcgtttgtcgc 29394  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataacta 290  Q
    || |||||| ||||||||||||||||||||| ||||||||||| ||||||||  ||||| |||||||||||||||||||||||| |||| ||||||||||    
T  29395 tttcatacgaacagtattgagtgtaagttttgagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatacaaatagacctataacta 29494  T
Q  291 ccta 294  Q
    ||||    
T  29495 ccta 29498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 497 - 577
Target Start/End: Original strand, 29675 - 29755
Alignment:
Q  497 gtcaaacccttgactgcattaaatgctcatgttctcacaaatattggctaacaaattgccccccagaaacgttattttcga 577  Q
    |||||||| ||||||| |||||||| |    || ||||||||||||||||||||||||||||||||||||||||| |||||    
T  29675 gtcaaacctttgactgtattaaatgatacccttttcacaaatattggctaacaaattgccccccagaaacgttatgttcga 29755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 24 - 789
Target Start/End: Complemental strand, 4764 - 4015
Alignment:
Q  24 caatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataa----gacttaaattgcaaaagtgtttaaaagattgta 119  Q
    |||||||| ||||||| ||||| ||||| ||| |||||||||||||| |||||||||||| ||    |||||||||||||||||||||||||||||||||    
T  4764 caatcgaaattctgtagataatgacaataaaaggaagtactttgaaaggacttagtaaaaaaaacaagacttaaattgcaaaagtgtttaaaagattgta 4665  T
Q  120 ttgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||| |    
T  4664 ttgaatttgtaaagacttaatgaaagttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatactgacagtattgagtgtaagat 4565  T
Q  220 tttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcgaatcaaa-atc 318  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||| ||||| |||    
T  4564 tttagtatgattgaattgtgacctctttttcctaagaaaaactactatttatacagatagtcctataactacctaatcgtatccgttcgattcaaatatc 4465  T
Q  319 gaaactagccgttcacaaactagtcgtttgctaaccgcttggtcttatcaataaaacctgaagagcgcgtcgacaacttctttcatccgtcgaactaaaa 418  Q
    |||||||||               ||||||||||||||||| ||||||| | |||| |||||| |||| |||  |||||| || |||| ||||||| |||    
T  4464 gaaactagc---------------cgtttgctaaccgcttgatcttatccacaaaatctgaag-gcgcttcg--aacttcctttatccatcgaact-aaa 4384  T
Q  419 acaacgtcttcgattcctgctgaa-gtacacttgtatttttcgatggatttccttcacaaagctacgcccca-tttttacgtc-aaacccttgactgcat 515  Q
    ||  | |||||||||||||||||| | |  | | || ||||||||||| ||| |||||||||||| | || | |||||| ||| ||||||||||||||||    
T  4383 acggcttcttcgattcctgctgaaggcatgcatata-ttttcgatgga-ttctttcacaaagctaagtccaactttttaggtcaaaacccttgactgcat 4286  T
Q  516 taaatgctcatgttctcacaaatattggctaacaaattgccccccagaaacgttattttcgaactttctctccatttaggagaaacttgacgtttctgaa 615  Q
    |||||| |  | ||||||||||||| |||||||||||||||||||||||||||||  || ||||| ||| || | | | |||||||||||||||||||||    
T  4285 taaatgatactattctcacaaatatcggctaacaaattgccccccagaaacgttaggtttgaactctctttcga-tcaagagaaacttgacgtttctgaa 4187  T
Q  616 attttttcgataaagtgcaattcctcagcatgacatcattcttttgacaacgggatatttcaaaaggtgcagaaccgtcttcataaggacttagtgggcc 715  Q
    |   ||||||| ||| |  | ||||||||||||||||| |||||| |||| |||||| ||||||| ||    |||||||||||| ||  |||||||||||    
T  4186 a--atttcgatgaagcgtgactcctcagcatgacatcactcttttaacaaagggataattcaaaa-gtcttaaaccgtcttcatcagagcttagtgggcc 4090  T
Q  716 at-accgtcattgggaaccatcaaaaaacaacttttccatgcaatgattgacatctgtccagtatcaaaagctat 789  Q
    ||    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||| |||||    
T  4089 atgtttgtcattgggaaccatcaaaaaacaactgttccatgcgatgattgacatctgtccaatatcaaaggctat 4015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 9 - 367
Target Start/End: Original strand, 15200 - 15554
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    ||||||||||| ||||||||||||||||||||||||     |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15200 aatccgtgttgaattcaatcgaagttctgtaaataa-----atgaaaagaagtactttgaaaagacttagtaaaacaagacttaaattgcaaaagtgttt 15294  T
Q  109 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtatt 208  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  15295 aaaagattgtattgaatttgtaaagacttaatgaaagttggtaaacatattaatactttgcaacttgtaactcgtttgtcgcttccatacggacagtatt 15394  T
Q  209 gagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 308  Q
    ||| ||||||||||||||||||||| ||||||||  ||| |  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15395 gagcgtaagtttttagtatgattgaattgtgaccattttatcataaaaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 15494  T
Q  309 aatcaaaatcgaaactagccgttcac-aaactagtcgtttgctaaccgcttggtcttatc 367  Q
    | |||||||||||||||||||||||| ||||||| ||||||||||| |||||| ||||||    
T  15495 attcaaaatcgaaactagccgttcacaaaactagccgtttgctaactgcttggccttatc 15554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 262; Significance: 1e-145; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 262; E-Value: 1e-145
Query Start/End: Original strand, 252 - 688
Target Start/End: Complemental strand, 24954360 - 24953914
Alignment:
Q  252 taagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcgaatcaaaatcgaaactagccgttcacaaa-ctagtcgtttgct 350  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  24954360 taagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcgattcaaaatcgaaactagccgttcacaaaactagccgtttgct 24954261  T
Q  351 aaccgcttggtcttatcaataaaacctgaagagcgcgtcgacaacttctttcatccgtcgaactaaaaacaacgtcttcgattcctgctgaagtacactt 450  Q
    ||| |||||| |||||   ||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||| ||    
T  24954260 aactgcttggccttatacgtaagacctaaagagcgcgtcgacaacttctttcatccgtcgaactagaaacaacgtattcgattcctgctgaagcacattt 24954161  T
Q  451 gtatttttcgatggatttccttcacaaagctacgccccatttttacgtc-aaacccttgactgcattaaatgctcatgttctcacaaatattggctaaca 549  Q
    ||||||||||||||||||  ||| |||| || |||||||| |||  ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24954160 gtatttttcgatggatttttttctcaaaacttcgccccatctttcggtcaaaacccttgactgcattaaatgctcatattctcacaaatattggctaaca 24954061  T
Q  550 aattg------ccccccagaaacgttattttcgaactttc--tctcca-tttaggagaaacttgacgtttctgaaattttttcgataaagtgcaattcct 640  Q
    |||||      ||||||| ||||||||| |||||||||||  |||| | ||||||||||| |||||||||||||||  || | ||| |||||||||||||    
T  24954060 aattgccccccccccccataaacgttatgttcgaactttctttctcgattttaggagaaaattgacgtttctgaaaagttct-gatgaagtgcaattcct 24953962  T
Q  641 cagcatgacatcattcttttgacaacgggatatttcaaaaggtgcaga 688  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24953961 cagcatgacatcattcttttgacaacgggatatttcaaaaggtgcaga 24953914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 192 - 549
Target Start/End: Complemental strand, 24967609 - 24967260
Alignment:
Q  192 tccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactac 291  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||    
T  24967609 tccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatacagatagtcctataactac 24967510  T
Q  292 ctaatcacatcctttcgaatcaaaatcgaaactagccgttcac-aaactagtcgtttgctaaccgcttggtcttatcaataaaacctgaagagcgcgtcg 390  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||| |||||| |||||   ||| |||| ||||||||||||    
T  24967509 ctaatcacatcctttcgattcaaaatcgaaactagccgttcacaaaactagccgtttgctaactgcttggccttatacgtaagacctaaagagcgcgtcg 24967410  T
Q  391 acaacttctttcatccgtcgaactaaaaacaacgtcttcgattcctgctgaagtacacttgtatttttcgatggatttccttcacaaagctacgccccat 490  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||| ||||||||||||| |||          ||| ||  |||||||    
T  24967409 acaacttctttcatccgtcgaactagaaacaacgtattcgattcctgctgaagcacatttgtatttttcgacgga----------aaaactttgccccat 24967320  T
Q  491 ttttacgtc-aaacccttgactgcattaaatgctcatgttctcacaaatattggctaaca 549  Q
     |||  ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24967319 ctttcggtcaaaacccttgactgcattaaatgctcatattctcacaaatattggctaaca 24967260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 24 - 331
Target Start/End: Complemental strand, 22648819 - 22648514
Alignment:
Q  24 caatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgtttaaaagattgtattga 123  Q
    |||||||| ||||||||| | | |||||  ||  || ||||| ||||||||||| |||||  |||||||||||| |||||||||||||  | ||||||||    
T  22648819 caatcgaaattctgtaaagattgacaatagaagaaaatacttcgaaaagacttaataaaa--agacttaaattgaaaaagtgtttaaagaactgtattga 22648722  T
Q  124 atttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagttttta 223  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22648721 atttgtaaagacttaatgaaagttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagttttta 22648622  T
Q  224 gtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcgaatcaaaatcgaaac 323  Q
    |||||||||| ||||||||| ||||| |||||||||||||||||||||||||||| ||||| ||||||||||||| |||  ||||| |||||||||||||    
T  22648621 gtatgattgaattgtgacctgtttttcctaagaaaaactactatttatacagataatcctagaactacctaatcatatctattcgattcaaaatcgaaac 22648522  T
Q  324 tagccgtt 331  Q
    ||||||||    
T  22648521 tagccgtt 22648514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 9 - 331
Target Start/End: Original strand, 23190127 - 23190447
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    ||||||||||| || |||||||| ||||||||| ||| |||||  ||  || ||||| ||||||||||| |||||  |||||||||||||||||||||||    
T  23190127 aatccgtgttgaatccaatcgaaattctgtaaagaatgacaatagaagaaaatacttcgaaaagacttaataaaa--agacttaaattgcaaaagtgttt 23190224  T
Q  109 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtatt 208  Q
    |||    ||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  23190225 aaagagctgtattgaatttgtaaatacttaatgaaagtttgtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtatt 23190324  T
Q  209 gagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 308  Q
    |||||||||||||||||| |||||| ||||||||  ||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||  ||||    
T  23190325 gagtgtaagtttttagtacgattgaattgtgacccgtttttcctaagaaaaactactatttatacagataatcctataactacctaatcatatctattcg 23190424  T
Q  309 aatcaaaatcgaaactagccgtt 331  Q
    | |||||||||||||||||||||    
T  23190425 attcaaaatcgaaactagccgtt 23190447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 9 - 331
Target Start/End: Original strand, 23203743 - 23204063
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    ||||||||||| ||  ||||||| ||||||||| ||| |||||  ||  || ||||| ||||||||||| |||||  |||||||||||||||||||||||    
T  23203743 aatccgtgttgaatctaatcgaaattctgtaaagaatgacaatagaagaaaatacttcgaaaagacttaataaaa--agacttaaattgcaaaagtgttt 23203840  T
Q  109 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtatt 208  Q
    |||    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||    
T  23203841 aaagagctgtattgaatttgtaaagacttaatgaaagttggtacacatattcatactttgcaacttgtgactcatttgtcgcttccatacggacagtatt 23203940  T
Q  209 gagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 308  Q
    |||||||||||||||||| |||||| ||||||||  ||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||  ||||    
T  23203941 gagtgtaagtttttagtacgattgaattgtgacccgtttttcctaagaaaaactactatttatacagataatcctataactacctaatcatatctattcg 23204040  T
Q  309 aatcaaaatcgaaactagccgtt 331  Q
    | |||||||||||||||||||||    
T  23204041 attcaaaatcgaaactagccgtt 23204063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 9 - 331
Target Start/End: Original strand, 23611382 - 23611702
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    ||||||||||| || |||||||| ||||||||| ||| |||||  ||  || ||||| ||||||||||| |||||  |||||||||||||||||||||||    
T  23611382 aatccgtgttgaatccaatcgaaattctgtaaagaatgacaatagaagaaaatacttcgaaaagacttaataaaa--agacttaaattgcaaaagtgttt 23611479  T
Q  109 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtatt 208  Q
    |||    ||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  23611480 aaagagctgtattgaatttgtaaatacttaatgaaagtttgtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtatt 23611579  T
Q  209 gagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 308  Q
    |||||||||||||||||| |||||| ||||||||  ||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||  ||||    
T  23611580 gagtgtaagtttttagtacgattgaattgtgacccgtttttcctaagaaaaactactatttatacagataatcctataactacctaatcatatctattcg 23611679  T
Q  309 aatcaaaatcgaaactagccgtt 331  Q
    | |||||||||||||||||||||    
T  23611680 attcaaaatcgaaactagccgtt 23611702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 180; E-Value: 9e-97
Query Start/End: Original strand, 9 - 331
Target Start/End: Original strand, 23614987 - 23615307
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    ||||||||| | || |||||||| ||||||||| ||| |||||  ||  || ||||| |||||| |||| |||||  |||||||||||||||||||||||    
T  23614987 aatccgtgtcgaatccaatcgaaattctgtaaagaatgacaatagaagaaaatacttcgaaaagtcttaataaaa--agacttaaattgcaaaagtgttt 23615084  T
Q  109 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtatt 208  Q
    |||  | ||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||    
T  23615085 aaagaactgtattgaatttgtaaagatttaatgaaggttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacagacagtatt 23615184  T
Q  209 gagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 308  Q
    ||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||| || |||||||||||||||| || |||  ||||    
T  23615185 gagtgtaagtttttagtatgattgaattgtgacctatttttcctaagaaaaactactatttatacaggtaatcctataactacctaaacatatctgttcg 23615284  T
Q  309 aatcaaaatcgaaactagccgtt 331  Q
    | ||||||||| |||||||||||    
T  23615285 attcaaaatcggaactagccgtt 23615307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 157 - 331
Target Start/End: Complemental strand, 22633939 - 22633765
Alignment:
Q  157 attcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaaga 256  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| | ||||    
T  22633939 attcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacctgtttttccaaaga 22633840  T
Q  257 aaaactactatttatacagatagtcctataactacctaatcacatcctttcgaatcaaaatcgaaactagccgtt 331  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  22633839 aaaactactatttatacagataatcctataactacctaatcatatctattcgattcaaaatcgaaactagccgtt 22633765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 9 - 164
Target Start/End: Complemental strand, 24963926 - 24963771
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    ||||||||||| |||||||||||||||||||||||| || ||| ||||||||||||| || |||||||||||||| |||||||||||| |||||||||||    
T  24963926 aatccgtgttgaattcaatcgaagttctgtaaataacaataataaaaagaagtacttcgacaagacttagtaaaacaagacttaaattacaaaagtgttt 24963827  T
Q  109 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatac 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24963826 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatgttcatac 24963771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 91 - 294
Target Start/End: Complemental strand, 24896814 - 24896611
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  ||||||||  | ||||||||| ||| ||||||||||||||| ||||| ||||| ||||||| ||||||||||| ||| |||||||||    
T  24896814 taaattgcaaagatgtttaaagaaatgtattgaaattgcaaagacttaatgaaaattggtgcacatgttcatactttgcaacttgtgactagtttgtcgc 24896715  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataacta 290  Q
    ||||||||| ||||||||||||||||||||| ||||||||||| ||||||||  ||||| |||||||||||||||||||||||| |||| | ||||||||    
T  24896714 ttccatacgaacagtattgagtgtaagttttgagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatacaaatagacttataacta 24896615  T
Q  291 ccta 294  Q
    ||||    
T  24896614 ccta 24896611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 686 - 841
Target Start/End: Complemental strand, 24950719 - 24950565
Alignment:
Q  686 agaaccgtcttcataaggacttagtgggccataccgtcattgggaaccatcaaaaaacaacttttccatgcaatgattgacatctgtccagtatcaaaag 785  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||  |||||||| |||||||||||||||||| |||||||||    
T  24950719 agaaccgtcttcctaaagacttagtgggccataccgtcattgggaaccatcaaaaa-caaccgttccatgcgatgattgacatctgtccaatatcaaaag 24950621  T
Q  786 ctatgtatggccctgagtcatacttttactcttacttcatttctctttagtatatt 841  Q
    |||| |||| |||||||||||| ||||||||||||||| |||||| ||||| ||||    
T  24950620 ctatatatgaccctgagtcatatttttactcttacttcgtttctccttagtttatt 24950565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 91 - 274
Target Start/End: Original strand, 39227406 - 39227589
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||   |||||||  | ||||||||| ||| |  |||| ||| ||||||||| ||||| ||||||||||||||||||| | ||||||||||     
T  39227406 taaattgcaaagacgtttaaagaaatgtattgaaattgcattgactgaataaaagttggtgcacatgttcatacattgcaacttgtgattcgtttgtcga 39227505  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttataca 274  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| ||||||||||||||||||||||||    
T  39227506 ttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttataca 39227589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 491 - 822
Target Start/End: Original strand, 23190561 - 23190890
Alignment:
Q  491 ttttacgtcaaacccttgactgcattaaatgctcatgttctcacaaatattggctaacaaattgccccccagaaacgttattttcgaactttctctccat 590  Q
    ||||| ||||||||||||||  ||||||||| |  | || |||||||||| |||||||||||||||||||||||||||||| || ||||| ||| || |     
T  23190561 ttttaggtcaaacccttgaccacattaaatgatagtattttcacaaatatcggctaacaaattgccccccagaaacgttatgtttgaactctctttcga- 23190659  T
Q  591 ttaggagaaac-ttgacgtttctgaaattttttcgataaagtgcaattcctcagcatgacatcattcttttgacaacgggatatttcaaaaggtgcagaa 689  Q
    ||| ||||||| ||||| |||||||||   |||||||||||||  | ||||| || |||||||| |||||||| || ||||||||||||||| |  | ||    
T  23190660 ttaagagaaactttgacctttctgaaa--atttcgataaagtgtgactcctctgcgtgacatcactcttttgaaaaggggatatttcaaaagtttta-aa 23190756  T
Q  690 ccgtcttcataaggacttagtgggccat-accgtcattgggaaccatcaaaaaacaacttttccatgcaatgattgacatctgtccagtatcaaaagcta 788  Q
    |||||| ||| ||  |||||||||||||    || ||||||||||| |||||||||||| |||||||| |||||||||||||||| |  |||||| ||||    
T  23190757 ccgtctccatcagagcttagtgggccatgtttgttattgggaaccaacaaaaaacaactgttccatgcgatgattgacatctgtcaaacatcaaaggcta 23190856  T
Q  789 tgtatggccctgagtcatacttttactcttactt 822  Q
    | |||| || | || |||||||||||||| ||||    
T  23190857 tatatgaccttaagccatacttttactctcactt 23190890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 491 - 822
Target Start/End: Original strand, 23611816 - 23612145
Alignment:
Q  491 ttttacgtcaaacccttgactgcattaaatgctcatgttctcacaaatattggctaacaaattgccccccagaaacgttattttcgaactttctctccat 590  Q
    ||||| ||||||||||||||  ||||||||| |  | || |||||||||| |||||||||||||||||||||||||||||| || ||||| ||| || |     
T  23611816 ttttaggtcaaacccttgaccacattaaatgatagtattttcacaaatatcggctaacaaattgccccccagaaacgttatgtttgaactctctttcga- 23611914  T
Q  591 ttaggagaaac-ttgacgtttctgaaattttttcgataaagtgcaattcctcagcatgacatcattcttttgacaacgggatatttcaaaaggtgcagaa 689  Q
    ||| ||||||| ||||| |||||||||   |||||||||||||  | ||||| || |||||||| |||||||| || ||||||||||||||| |  | ||    
T  23611915 ttaagagaaactttgacctttctgaaa--atttcgataaagtgtgactcctctgcgtgacatcactcttttgaaaaggggatatttcaaaagtttta-aa 23612011  T
Q  690 ccgtcttcataaggacttagtgggccat-accgtcattgggaaccatcaaaaaacaacttttccatgcaatgattgacatctgtccagtatcaaaagcta 788  Q
    |||||| ||| ||  |||||||||||||    || ||||||||||| |||||||||||| |||||||| |||||||||||||||| |  |||||| ||||    
T  23612012 ccgtctccatcagagcttagtgggccatgtttgttattgggaaccaacaaaaaacaactgttccatgcgatgattgacatctgtcaaacatcaaaggcta 23612111  T
Q  789 tgtatggccctgagtcatacttttactcttactt 822  Q
    | |||| || | || |||||||||||||| ||||    
T  23612112 tatatgaccttaagccatacttttactctcactt 23612145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 145 - 279
Target Start/End: Original strand, 16664690 - 16664823
Alignment:
Q  145 gttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctc 244  Q
    ||||||||| | |||||||||||||||||||| |||||||| ||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||||||      
T  16664690 gttggtacatagattcatacattgcaacttgtgactcgtttatcgcttccatacggatagt-ttgagcgtaagtttttagtatgattgaattgtgaccct 16664788  T
Q  245 ttttttctaagaaaaactactatttatacagatag 279  Q
    |||||||||||||||||||||||||||||| ||||    
T  16664789 ttttttctaagaaaaactactatttatacaaatag 16664823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 133 - 279
Target Start/End: Complemental strand, 31818053 - 31817908
Alignment:
Q  133 gacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattg 232  Q
    |||| |||| |||||||||| |||||||||| |||||||||||| |||||||| ||||||||||||||| ||| ||||| |||| ||||||||| |||||    
T  31818053 gactgaatgtaagttggtactcatattcatatattgcaacttgtgactcgtttatcgcttccatacggatagt-ttgagcgtaaatttttagtacgattg 31817955  T
Q  233 agttgtgacctcttttttctaagaaaaactactatttatacagatag 279  Q
    | ||||||||  |||||  ||||||||||||||||||||||||||||    
T  31817954 aattgtgacccgtttttcataagaaaaactactatttatacagatag 31817908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 146 - 279
Target Start/End: Complemental strand, 22881069 - 22880937
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||| |||||||| ||| |||||  || ||||||||||||||||| |||||||   |    
T  22881069 ttggtacacatattcatacattgcaacttgtgactcgtttatcgctttcatacggatagt-ttgagcatatgtttttagtatgattgaattgtgacactt 22880971  T
Q  246 tttttctaagaaaaactactatttatacagatag 279  Q
    |||| |||||||||||||||||||||||| ||||    
T  22880970 ttttcctaagaaaaactactatttatacaaatag 22880937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 491 - 822
Target Start/End: Complemental strand, 22648339 - 22648010
Alignment:
Q  491 ttttacgtcaaacccttgactgcattaaatgctcatgttctcacaaatattggctaacaaattgcc-ccccagaaacgttattttcgaactttctctcca 589  Q
    ||||| ||||||||||||||  ||||||||| |  | || |||||||||| || |||||||||||| ||||||||| ||||| || ||||| ||| || |    
T  22648339 ttttaggtcaaacccttgaccacattaaatgatagtattttcacaaatatcgggtaacaaattgcccccccagaaatgttatgtttgaactctctttcga 22648240  T
Q  590 tttaggagaaacttgacgtttctgaaattttttcgataaagtgcaattcctcagcatgacatcattcttttgacaacgggatatttcaaaaggtgcagaa 689  Q
     ||| ||||||||||||||||||||||   |||||||||||||  | |||||  | |||||||| |||||||| || |||| |||||||||| |  | ||    
T  22648239 -ttaagagaaacttgacgtttctgaaa--atttcgataaagtgtgactcctctacgtgacatcactcttttgaaaatgggacatttcaaaagtttta-aa 22648144  T
Q  690 ccgtcttcataaggacttagtgggccat-accgtcattgggaaccatcaaaaaacaacttttccatgcaatgattgacatctgtccagtatcaaaagcta 788  Q
     ||||| ||| ||  |||||||||||||    || ||||||||| |||||||||||| | || ||||| |||||||||||||||| |  |||||| ||||    
T  22648143 tcgtctccattagagcttagtgggccatgtttgttattgggaacaatcaaaaaacaaatgttacatgcgatgattgacatctgtcaaacatcaaaggcta 22648044  T
Q  789 tgtatggccctgagtcatacttttactcttactt 822  Q
    | |||| || | || |||||||||||||| ||||    
T  22648043 tatatgaccttaagccatacttttactctcactt 22648010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 491 - 822
Target Start/End: Original strand, 23615464 - 23615800
Alignment:
Q  491 ttttacgtcaaacccttgactgcattaaatgctcatgttctcacaaatattggctaacaaattgccccccagaaacgttattttcgaactttctctccat 590  Q
    ||||| ||||||||||||||  ||||||||| |  | || |||||||||| || ||||||||||||||||||||||||||| || ||||| | | || ||    
T  23615464 ttttaagtcaaacccttgaccacattaaatgatagtattttcacaaatatcggttaacaaattgccccccagaaacgttatgtttgaactctttttcgat 23615563  T
Q  591 ttaggagaaacttgacgtttctgaaattttttcgataaagtgcaattcctcagcatgacatcattcttttgacaacgggatatttcaaaaggtgcag--- 687  Q
      || ||||||||||||||||||||| |||  ||||||||||  | ||||| || ||||| || |||||||| || |||| |||||||||| |  |        
T  23615564 caag-agaaacttgacgtttctgaaaattt--cgataaagtgtgactcctctgcgtgacaccactcttttgaaaaggggacatttcaaaagttttaactt 23615660  T
Q  688 ----aaccgtcttcataaggacttagtgggccatacc-gtcattgggaaccatcaaaaaacaacttttccatgcaatgattgacatctgtccagtatcaa 782  Q
        |||||||| ||| ||  |||||||||||||    || |||||||||||||||||||||||| |||||||| |||||||||||||||| |  |||||    
T  23615661 tttaaaccgtctccatcagagcttagtgggccatgtttgttattgggaaccatcaaaaaacaactgttccatgcgatgattgacatctgtcaaacatcaa 23615760  T
Q  783 aagctatgtatggccctgagtcatacttttactcttactt 822  Q
    | ||||| |||| || |  | |||||||||||||| ||||    
T  23615761 aggctatatatgaccttaggccatacttttactctcactt 23615800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 9 - 162
Target Start/End: Complemental strand, 22635394 - 22635243
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    ||||||||||| || |||||||| ||||||||| ||| |||||  ||  || ||||| ||||||||||| |||||  |||| |||||||| ||| |||||    
T  22635394 aatccgtgttgaatccaatcgaaattctgtaaagaatgacaatagaagaaaatacttcgaaaagacttaataaaa--agacctaaattgcgaaattgttt 22635297  T
Q  109 aaaagat-tgtattgaatttgtaaagacttaatgaaagttggtacacatattcat 162  Q
    ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22635296 aaa-gatctgtattgaatttgtaaagacttaatgaaagttggtacacatattcat 22635243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 146 - 274
Target Start/End: Complemental strand, 22593866 - 22593739
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||| ||||||||||||||||||| |||||||| || ||||||| || | | | |||||||||||||||| |||||||||| |||||||| ||    
T  22593866 ttggtacacatgttcatacattgcaacttgtgactcgtttctctcttccatgcgcataat-ttgagtgtaagttttttgtatgattgaattgtgacc-ct 22593769  T
Q  246 tttttctaag-aaaaactactatttataca 274  Q
    |||  || || |||||||||||||||||||    
T  22593768 tttcccttagaaaaaactactatttataca 22593739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 146 - 273
Target Start/End: Complemental strand, 20524262 - 20524136
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    |||||||| | |||||||||||||||||||| |||||||| || |||  || |||| ||| |||||||||||||||  |||||||||| ||||||| | |    
T  20524262 ttggtacaaaaattcatacattgcaacttgtgactcgtttttctcttaaatgcggatagt-ttgagtgtaagttttctgtatgattgaattgtgacatgt 20524164  T
Q  246 tttttctaagaaaaactactatttatac 273  Q
    |||| ||| ||||||||| |||||||||    
T  20524163 ttttcctatgaaaaactattatttatac 20524136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 146 - 272
Target Start/End: Original strand, 34827636 - 34827761
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||| |||||||||| |||||||| |||||||| || ||||||| | || | | |||||||||||||||| |||||||||| |||||||| ||    
T  34827636 ttggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcagataat-ttgagtgtaagttttttgtatgattgaattgtgacc-ct 34827733  T
Q  246 tttttcta-agaaaaactactatttata 272  Q
    |||| |||  ||||||||||||||||||    
T  34827734 ttttcctagggaaaaactactatttata 34827761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 149 - 279
Target Start/End: Original strand, 23870534 - 23870663
Alignment:
Q  149 gtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctctttt 248  Q
    |||||||| ||||||||||||||||||| |||||||| || ||  | | |  | | | |||||||||||||||| |||||||||| |||||||| |||||    
T  23870534 gtacacatgttcatacattgcaacttgtgactcgtttctctctctcgtgcaaataat-ttgagtgtaagttttttgtatgattgaattgtgaccactttt 23870632  T
Q  249 ttctaagaaaaactactatttatacagatag 279  Q
    || || |||||||||||||||||||| ||||    
T  23870633 ttttaggaaaaactactatttatacaaatag 23870663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 146 - 279
Target Start/End: Complemental strand, 37130527 - 37130394
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||| ||||||||||||||||||| |||||||| || ||||||| |||| | | |||| ||||||||||| |||||||||| ||| ||||  |    
T  37130527 ttggtacacatgttcatacattgcaacttgtgactcgtttctctcttccatgcggataat-ttgattgtaagttttttgtatgattgaattgcgaccctt 37130429  T
Q  246 tttttcta-agaaaaactactatttatacagatag 279  Q
    |||  |||  |||||||||||||||||||| ||||    
T  37130428 tttccctagggaaaaactactatttatacaaatag 37130394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 146 - 279
Target Start/End: Original strand, 28567731 - 28567862
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||| ||||||||||||||||||| |||| ||| || ||||||| |||| | | |||||||||||||||| ||||||| || ||||||||| |    
T  28567731 ttggtacacatgttcatacattgcaacttgtgactcatttctctcttccatgcggataat-ttgagtgtaagttttt-gtatgatagaattgtgacct-t 28567827  T
Q  246 tttttct-aagaaaaactactatttatacagatag 279  Q
    |||| || ||| ||||||||||||| |||| ||||    
T  28567828 ttttcctgaaggaaaactactatttctacaaatag 28567862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 146 - 279
Target Start/End: Original strand, 23815003 - 23815137
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaag-tttttagtatgattgagttgtgacctc 244  Q
    ||||||||||| ||||||||||||||||||| |||||||| || ||||||| |||| | | || |||||||| ||||| ||||||| || |||||||| |    
T  23815003 ttggtacacatgttcatacattgcaacttgtgactcgtttctctcttccatgcggataat-tttagtgtaagtttttttgtatgatagaattgtgacc-c 23815100  T
Q  245 ttttttc--taagaaaaactactatttatacagatag 279  Q
    |||||||  || | |||||||||||||||||| ||||    
T  23815101 ttttttccttagggaaaactactatttatacaaatag 23815137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 273
Target Start/End: Original strand, 21904983 - 21905109
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||| ||||||||||| ||||||| |||||||  || |||  ||  ||| ||| |||||||||||||||| |||||||||  ||||||||| |    
T  21904983 ttggtacacatgttcatacattgtaacttgtgactcgttcctctcttgaatgtggatagt-ttgagtgtaagttttttgtatgattggtttgtgacctgt 21905081  T
Q  246 tttttctaagaaaaactactatttatac 273  Q
    |||  ||| ||||||||| |||||||||    
T  21905082 tttccctatgaaaaactattatttatac 21905109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 279
Target Start/End: Original strand, 23803373 - 23803509
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaag-tttttagtatgattgagttgtgacc-- 242  Q
    ||||||||||| ||||||||||||||||||| |||||||| || ||||||| |||| | | ||||||| ||| ||||| ||||||| || ||||||||      
T  23803373 ttggtacacatgttcatacattgcaacttgttactcgtttctctcttccatgcggataat-ttgagtgcaagtttttttgtatgatagaattgtgaccct 23803471  T
Q  243 -tcttttttctaagaaaaactactatttatacagatag 279  Q
     | || ||| || |||||||||||||||||||| ||||    
T  23803472 tttttatttataggaaaaactactatttatacaaatag 23803509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 279
Target Start/End: Original strand, 21256506 - 21256611
Alignment:
Q  173 ttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttata 272  Q
    |||| |||||||| || ||||||| |||| | | |||||||||||||||| |||||||||| |||||||| |||||   || | ||||||||||||||||    
T  21256506 ttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgaattgtgaccacttttccttagggaaaactactatttata 21256604  T
Q  273 cagatag 279  Q
    || ||||    
T  21256605 caaatag 21256611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 272
Target Start/End: Complemental strand, 22708291 - 22708169
Alignment:
Q  149 gtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctctttt 248  Q
    |||||||| |||||||||||||| |||| | |||||| || ||| ||| |||| | | || ||||||||||||| |||| ||||| |||||||| |||||    
T  22708291 gtacacatgttcatacattgcaatttgtgattcgtttctctcttgcatgcggataat-ttaagtgtaagttttttgtataattgaattgtgaccactttt 22708193  T
Q  249 ttctaagaaaaactactatttata 272  Q
        | ||||||||||||||||||    
T  22708192 cctgaggaaaaactactatttata 22708169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 23829851 - 23829906
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacgga 201  Q
    ||||||||||| ||||||||||||||||||| |||||||| || ||||||| ||||    
T  23829851 ttggtacacatgttcatacattgcaacttgtgactcgtttctctcttccatgcgga 23829906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 273
Target Start/End: Original strand, 23995672 - 23995797
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    |||||||||| ||||||||||||  |||||| |||||||| || ||   || | || ||| |||||||||||||||  |||||||||| ||||||| | |    
T  23995672 ttggtacacagattcatacattgtgacttgttactcgtttctctctaa-atgcagatagt-ttgagtgtaagttttctgtatgattgaattgtgacatgt 23995769  T
Q  246 tttttctaagaaaaactactatttatac 273  Q
    |||| |||  ||||||||||||||||||    
T  23995770 ttttcctataaaaaactactatttatac 23995797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 30051973 - 30052039
Alignment:
Q  207 ttgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatac 273  Q
    |||||||||||||||  |||||||||| ||||||||  ||||| ||| ||||| |||||||||||||    
T  30051973 ttgagtgtaagttttctgtatgattgaattgtgacccatttttcctatgaaaagctactatttatac 30052039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 30143017 - 30143083
Alignment:
Q  207 ttgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatac 273  Q
    |||||||||||||||  |||||||||| ||||||||  ||||| ||| ||||| |||||||||||||    
T  30143017 ttgagtgtaagttttctgtatgattgaattgtgacccatttttcctatgaaaagctactatttatac 30143083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 273
Target Start/End: Original strand, 20281220 - 20281285
Alignment:
Q  208 tgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatac 273  Q
    ||||||||| ||||  |||||| ||| ||||||||| ||||||||  |||||||||||||||||||    
T  20281220 tgagtgtaaattttctgtatgactgaattgtgacctgttttttctttgaaaaactactatttatac 20281285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 273
Target Start/End: Original strand, 10480411 - 10480538
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||| ||||||||||||||||||  ||| |||| || |||  || |||| ||| | |||||||||||||  |||||||||  ||||||||  |    
T  10480411 ttggtacacatgttcatacattgcaacttgcgacttgtttctctcttgaatgcggatagt-tcgagtgtaagttttgtgtatgattggattgtgaccctt 10480509  T
Q  246 tttttctaa-gaaaaactactatttatac 273  Q
    ||   |||| |||||||||||||||||||    
T  10480510 ttcccctaaggaaaaactactatttatac 10480538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 273
Target Start/End: Original strand, 25349286 - 25349415
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||||| ||||||||||||||| | |||||||  || |||  || |||| ||| |||||||||||||||  ||||||||   ||||||||  |    
T  25349286 ttggtacacatatccatacattgcaacttatgactcgttcctctcttgaatgcggatagt-ttgagtgtaagttttgtgtatgatttgattgtgacccgt 25349384  T
Q  246 tttttctaag---aaaaactactatttatac 273  Q
    |||  |||||   ||||||||||||||||||    
T  25349385 tttccctaagaaaaaaaactactatttatac 25349415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 273
Target Start/End: Complemental strand, 20442338 - 20442213
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    |||||||| | ||||||||||||  |||||| |||||||| || ||   || |||| ||| |||| ||||||||||  |||||||||| ||||||| |      
T  20442338 ttggtacagagattcatacattgtgacttgttactcgtttatctctga-atgcggatagt-ttgattgtaagttttctgtatgattgaattgtgacatgc 20442241  T
Q  246 tttttctaagaaaaactactatttatac 273  Q
    |||| ||| |||||||||||||||||||    
T  20442240 ttttcctatgaaaaactactatttatac 20442213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 535 - 566
Target Start/End: Original strand, 23803778 - 23803809
Alignment:
Q  535 aaatattggctaacaaattgccccccagaaac 566  Q
    ||||||||||||||||||||||||||||||||    
T  23803778 aaatattggctaacaaattgccccccagaaac 23803809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 30089988 - 30090054
Alignment:
Q  207 ttgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatac 273  Q
    |||||||||||||||  |||||||||| ||||||||  ||||| ||| ||||| | |||||||||||    
T  30089988 ttgagtgtaagttttctgtatgattgaattgtgacccgtttttcctatgaaaagcgactatttatac 30090054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 30126593 - 30126659
Alignment:
Q  207 ttgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatac 273  Q
    |||||||||||||||  |||||||||| ||||||||  ||||| ||| ||||| | |||||||||||    
T  30126593 ttgagtgtaagttttctgtatgattgaattgtgacccgtttttcctatgaaaagcgactatttatac 30126659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 209; Significance: 1e-114; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 9 - 233
Target Start/End: Original strand, 16309973 - 16310197
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16309973 aatccgtgttgaattcaatcgaagttctgtaaataataataatgaaaagaagtactttgaaaagacttagtaaaacaagacttaaattgcaaaagtgttt 16310072  T
Q  109 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtatt 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16310073 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtatt 16310172  T
Q  209 gagtgtaagtttttagtatgattga 233  Q
    |||||||||||||||||||||||||    
T  16310173 gagtgtaagtttttagtatgattga 16310197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 9 - 331
Target Start/End: Complemental strand, 23432171 - 23431851
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    ||||||||||| ||||||||||| ||||||||| ||| |||||  ||  || ||||| ||||||||||| |||||  |||||| ||||| ||||||||||    
T  23432171 aatccgtgttgaattcaatcgaaattctgtaaagaatgacaatagaagaaaatacttcgaaaagacttaataaaa--agacttgaattgtaaaagtgttt 23432074  T
Q  109 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtatt 208  Q
    |||  | |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||| ||||    
T  23432073 aaagaactgtactgaatttgtaaagacttaatgaaagttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacgaacaatatt 23431974  T
Q  209 gagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 308  Q
    ||||||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||||| ||| ||||||||||||||||||| |||  || |    
T  23431973 gagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatacaaataatcctataactacctaatcatatctattag 23431874  T
Q  309 aatcaaaatcgaaactagccgtt 331  Q
    | |||||||||||||||||||||    
T  23431873 attcaaaatcgaaactagccgtt 23431851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 9 - 331
Target Start/End: Complemental strand, 23491211 - 23490893
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    ||||||||||| ||||||| ||| |||| |||| ||| |||||  ||  || ||||| ||||||||||| |||||  |||||| ||||| ||||||||||    
T  23491211 aatccgtgttgaattcaattgaaattctataaagaatgacaatagaagaaaatacttcgaaaagacttaataaaa--agacttgaattgtaaaagtgttt 23491114  T
Q  109 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtatt 208  Q
    |||  | ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||    
T  23491113 aaagaactgtattgaatttgtaaagacttaatgagagttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggaaagtatt 23491014  T
Q  209 gagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 308  Q
    ||||||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||||| ||| ||||||||||||||||||| |||  ||||    
T  23491013 gagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatacaaataatcctataactacctaatcatatctattcg 23490914  T
Q  309 aatcaaaatcgaaactagccgtt 331  Q
    | ||  |||||||||||||||||    
T  23490913 attc--aatcgaaactagccgtt 23490893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 9 - 331
Target Start/End: Complemental strand, 23496809 - 23496491
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    ||||||||||| ||||||| ||| |||| |||| ||| |||||  ||  || ||||| ||||||||||| |||||  |||||| ||||| ||||||||||    
T  23496809 aatccgtgttgaattcaattgaaattctataaagaatgacaatagaagaaaatacttcgaaaagacttaataaaa--agacttgaattgtaaaagtgttt 23496712  T
Q  109 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtatt 208  Q
    |||  | ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||    
T  23496711 aaagaactgtattgaatttgtaaagacttaatgagagttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggatagtatt 23496612  T
Q  209 gagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcg 308  Q
    ||||||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||||| ||| ||||||||||||||||||| |||  ||||    
T  23496611 gagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatacaaataatcctataactacctaatcatatctattcg 23496512  T
Q  309 aatcaaaatcgaaactagccgtt 331  Q
    | ||  |||||||||||||||||    
T  23496511 attc--aatcgaaactagccgtt 23496491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 91 - 298
Target Start/End: Complemental strand, 16209974 - 16209767
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  ||||||||  | ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||    
T  16209974 taaattgcaaagatgtttaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgc 16209875  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataacta 290  Q
    ||||||| |||||||||||||||||||||||||||||||||||  |||||||  ||||| |||||||||||||||||||||||| |||| ||||||||||    
T  16209874 ttccatatggacagtattgagtgtaagtttttagtatgattgaactgtgacccgtttttcctaagaaaaactactatttatacaaatagacctataacta 16209775  T
Q  291 cctaatca 298  Q
    ||||||||    
T  16209774 cctaatca 16209767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 116 - 303
Target Start/End: Original strand, 1557660 - 1557847
Alignment:
Q  116 tgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgta 215  Q
    |||||| || ||||||||||||||||||| ||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  1557660 tgtattaaaattgtaaagacttaatgaaatttggtacacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggacaatattgagtgta 1557759  T
Q  216 agtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcc 303  Q
    |||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||| ||| ||||    
T  1557760 agttttgagtatgattgaattgtgacctctttttcctaagaaaaactactatttatacagatagacatataactacctagtcatatcc 1557847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 116 - 331
Target Start/End: Original strand, 19025367 - 19025583
Alignment:
Q  116 tgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgta 215  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19025367 tgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgta 19025466  T
Q  216 agtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcga-atcaa 314  Q
    |||||||||||||||||| ||||||||  |||||  ||||||||||| ||||||||||| ||| | |||||||| |||||||| | |  |||||  | ||    
T  19025467 agtttttagtatgattgaattgtgacccgtttttcttaagaaaaacttctatttatacaaataattctataactgcctaatcataactattcgatttgaa 19025566  T
Q  315 aatcgaaactagccgtt 331  Q
    |||||||||||||||||    
T  19025567 aatcgaaactagccgtt 19025583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 116 - 331
Target Start/End: Original strand, 19038410 - 19038626
Alignment:
Q  116 tgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgta 215  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  19038410 tgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacaatattgagtgta 19038509  T
Q  216 agtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcga-atcaa 314  Q
    |||||||||||||||||| ||||||||  |||||  ||||||||||| ||||||||||| ||| | |||||||| |||||||| | |  |||||  | ||    
T  19038510 agtttttagtatgattgaattgtgacccgtttttcttaagaaaaacttctatttatacaaataattctataactgcctaatcataactattcgatttgaa 19038609  T
Q  315 aatcgaaactagccgtt 331  Q
    |||||||||||||||||    
T  19038610 aatcgaaactagccgtt 19038626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 91 - 298
Target Start/End: Original strand, 30755481 - 30755688
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  ||| ||||  | ||||||||| ||| ||||||||||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||    
T  30755481 taaattgcaaagatgtgtaaagaaatgtattgaaattgcaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgc 30755580  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataacta 290  Q
    ||||||||||||| ||||||||||||||||| ||||||||||| ||||||||  ||||| |||||||||||||||||||||||| |||| | ||||||||    
T  30755581 ttccatacggacaatattgagtgtaagttttgagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatacaaatagacttataacta 30755680  T
Q  291 cctaatca 298  Q
    ||||||||    
T  30755681 cctaatca 30755688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 91 - 279
Target Start/End: Original strand, 19405738 - 19405926
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  || |||||  | ||||||||| ||| |  |||||||||||||||||| ||||| ||||||| ||||||||||| |||||||||||||    
T  19405738 taaattgcaaagatgattaaagaaatgtattgaaattgcattgacttaatgaaagttggtgcacatgttcatactttgcaacttgtgactcgtttgtcgc 19405837  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatag 279  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||||| ||||    
T  19405838 ttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatacaaatag 19405926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 138 - 279
Target Start/End: Complemental strand, 11794234 - 11794094
Alignment:
Q  138 aatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttg 237  Q
    |||| |||||||||||||| ||||||||||||||||||| | |||||| |  ||||||| |||| | | |||||||||| ||||| |||| ||||| |||    
T  11794234 aatgtaagttggtacacatgttcatacattgcaacttgtgattcgtttatatcttccatgcggataat-ttgagtgtaaattttttgtataattgaattg 11794136  T
Q  238 tgacctcttttttctaagaaaaactactatttatacagatag 279  Q
    |||||  ||||| ||| | |||||||||||||||||| ||||    
T  11794135 tgacccttttttcctatggaaaactactatttatacatatag 11794094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 150 - 279
Target Start/End: Original strand, 18258120 - 18258248
Alignment:
Q  150 tacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttt 249  Q
    ||||||| ||||||||||||||||||| |||||||| || ||| ||| |||| | | |||||||||| ||||| |||| | ||| ||||||||  |||||    
T  18258120 tacacatgttcatacattgcaacttgtgactcgtttctctctttcatgcggataat-ttgagtgtaacttttttgtattaatgaattgtgaccctttttt 18258218  T
Q  250 tctaagaaaaactactatttatacagatag 279  Q
    |||||| |||||||||||||||||| ||||    
T  18258219 tctaaggaaaactactatttatacaaatag 18258248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 725 - 822
Target Start/End: Complemental strand, 23496106 - 23496009
Alignment:
Q  725 ttgggaaccatcaaaaaacaacttttccatgcaatgattgacatctgtccagtatcaaaagctatgtatggccctgagtcatacttttactcttactt 822  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||| |  |||||| ||||| |||| || | || |||||||||||||| ||||    
T  23496106 ttgggaaccatcaaaaaacaactgttccatgcgatgattgacatctgtcaaacatcaaaggctatatatgaccttaagccatacttttactctcactt 23496009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 492 - 660
Target Start/End: Original strand, 19025721 - 19025887
Alignment:
Q  492 tttacgtcaaacccttgactgcattaaatgctcatgttctcacaaatattggctaacaaattgccccccagaaacgttattttcgaactttctctccatt 591  Q
    |||| ||||||||||||||||||||||||| |    || |||||||||| |||||||||||||||||||||||||||| | ||  |||| | | | || |    
T  19025721 tttaggtcaaacccttgactgcattaaatgatagcattttcacaaatatcggctaacaaattgccccccagaaacgttttgtttaaactct-ttttcaat 19025819  T
Q  592 taggagaaacttgacgtttctgaaattttttcgataaagtgcaattcctcagcatgacatcattctttt 660  Q
     | |||||||||||| |||||||||  |||||||||||||  || ||||  ||||||| ||||||||||    
T  19025820 caagagaaacttgacatttctgaaa-attttcgataaagtataactccttcgcatgacgtcattctttt 19025887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 724 - 822
Target Start/End: Original strand, 19025959 - 19026057
Alignment:
Q  724 attgggaaccatcaaaaaacaacttttccatgcaatgattgacatctgtccagtatcaaaagctatgtatggccctgagtcatacttttactcttactt 822  Q
    |||||||||||||||||||||||| |||||||| ||  |||||||||||| |  |||||| ||||| |||| || || |||||||||||||||| ||||    
T  19025959 attgggaaccatcaaaaaacaactgttccatgcgatcgttgacatctgtcaaacatcaaaggctatatatgaccttgggtcatacttttactctcactt 19026057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 146 - 247
Target Start/End: Original strand, 26460597 - 26460697
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||| ||||||||||||||||||| |||||||| || ||||||| |||| | | |||||||||||||||  |||||||||  |||||||| ||    
T  26460597 ttggtacacatgttcatacattgcaacttgtgactcgtttatctcttccatgcggataat-ttgagtgtaagttttgtgtatgattggattgtgaccact 26460695  T
Q  246 tt 247  Q
    ||    
T  26460696 tt 26460697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 279
Target Start/End: Original strand, 16597257 - 16597389
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||| ||||||||||||||||||| |||||||| |  ||||||| |||| | | ||||||||||||||||  ||||||||  |||| |||| |    
T  16597257 ttggtacacatgttcatacattgcaacttgtcactcgtttctttcttccatgcggataat-ttgagtgtaagttttttatatgattggattgtcacctgt 16597355  T
Q  246 tttttctaagaaaaactactatttatacagatag 279  Q
    |||   || ||||||||||||  |||||| ||||    
T  16597356 tttccttaggaaaaactactacgtatacaaatag 16597389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 535 - 577
Target Start/End: Original strand, 26461014 - 26461056
Alignment:
Q  535 aaatattggctaacaaattgccccccagaaacgttattttcga 577  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  26461014 aaatattggctaacaaattgccccccagaaacgtcattttcga 26461056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 242
Target Start/End: Original strand, 19272323 - 19272417
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacc 242  Q
    ||||||||||| ||||||||| ||||||||| |||||||| || ||||||| | || | | |||||||||||||||  |||||||||  ||||||||    
T  19272323 ttggtacacatgttcatacat-gcaacttgtgactcgtttctctcttccatgcagataat-ttgagtgtaagttttgtgtatgattggattgtgacc 19272417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 535 - 577
Target Start/End: Original strand, 16597669 - 16597711
Alignment:
Q  535 aaatattggctaacaaattgccccccagaaacgttattttcga 577  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||    
T  16597669 aaatattggctaacgaattgcccctcagaaacgtcattttcga 16597711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 185; Significance: 1e-99; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 85 - 631
Target Start/End: Complemental strand, 58684 - 58159
Alignment:
Q  85 aagacttaaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtt 184  Q
    |||| |||||||||||| |||||||||| | ||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||| |||||||    
T  58684 aagatttaaattgcaaaggtgtttaaaaaactgtattgaatttgtaaagacttaatgaaaattggtacacagattcatactttgcaacttgtgactcgtt 58585  T
Q  185 tgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtccta 284  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||| ||| |||||    
T  58584 tgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacctgtttttcctaagaaaaactactatttatacaaataatccta 58485  T
Q  285 taactacctaatcacatcctttcgaatcaaaatcgaaactagccgttcacaaactagtcgtttgctaaccgcttggtcttatcaataaaacctgaagagc 384  Q
    |||||||||||||| |||  ||||| | |||||||||||||||               ||||||||||  | ||| ||||||| | |||  |||||| ||    
T  58484 taactacctaatcatatctgttcgatttaaaatcgaaactagc---------------cgtttgctaattggttgatcttatccacaaagtctgaag-gc 58401  T
Q  385 gcgtcgacaacttctttcatccgtcgaactaaaaacaacgtcttcgattcctgctgaagtacacttgtatttttcgatggatttccttcacaaagctacg 484  Q
    || |||| |||||| || |||| || ||||  ||||  | | ||||||||||||||||| | |  | || |||||||| || ||||||||||||||||      
T  58400 gcttcgataacttcctttatccatcaaact--aaacggcttgttcgattcctgctgaag-atatatata-ttttcgataga-ttccttcacaaagctaaa 58306  T
Q  485 ccc--catttttacgtcaaacccttgactgcattaaatgctcatgttctcacaaatattggctaacaaattgccccccagaaacgttattttcgaacttt 582  Q
    |||  | | |||| ||||||||||||||||||||||||| |  | || |||||||||| ||||||||||| |||||||||||||||||| || ||||| |    
T  58305 cccatcttctttaggtcaaacccttgactgcattaaatgatagtattttcacaaatatcggctaacaaatggccccccagaaacgttatgtttgaactct 58206  T
Q  583 ctctccatttaggagaaacttgacgtttctgaaattttttcgataaagt 631  Q
     | || | | | |||||||||||||||||||||| ||||||||||||||    
T  58205 ttttcga-tcaagagaaacttgacgtttctgaaa-tttttcgataaagt 58159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 172; Significance: 6e-92; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 172; E-Value: 6e-92
Query Start/End: Original strand, 118 - 774
Target Start/End: Complemental strand, 44353 - 43712
Alignment:
Q  118 tattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaag 217  Q
    ||||||||||||||||||||||||||| ||||| |||| |||||||| ||||||||||| ||||||||||||||| |||||||||| |||||||||||||    
T  44353 tattgaatttgtaaagacttaatgaaaattggtgcacagattcatactttgcaacttgtgactcgtttgtcgctttcatacggacattattgagtgtaag 44254  T
Q  218 tttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcgaatcaaaat 317  Q
    |||||||||||||||| ||||||||  ||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||  ||| | |||||||    
T  44253 tttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatacagataatcctataactacctaatcatatctattcaattcaaaat 44154  T
Q  318 cgaaactagccgttcacaaactagtcgtttgctaaccgcttggtcttatcaataaaacctgaagagcgcgtcgacaacttctttcatccgtcgaactaaa 417  Q
    |||||               |||||||||||| ||||||||| || ||||   |||| |||||| | || |||| |||||| || |  | |||||||  |    
T  44153 cgaaa---------------ctagtcgtttgccaaccgcttgatcctatccgcaaaatctgaag-gtgcttcgataacttcctttaatcatcgaact-ga 44071  T
Q  418 aacaacgtcttcgattcctgctgaag---tacacttgtat-ttttcgatggatttccttcacaaagctacgcccca-tttttacgtcaaacccttgactg 512  Q
    |||||| |||||| ||||||||||||   || |  | ||| ||||||||||||||||||||||| |||| | | || |||||  ||||||||||||||||    
T  44070 aacaacttcttcgcttcctgctgaaggcatatatatatatattttcgatggatttccttcacaatgctaagtcgcactttttgggtcaaacccttgactg 43971  T
Q  513 cattaaatgctcatgttctcacaaatattggctaacaaattgccccccagaaacgttattttcgaactttctctccatttaggagaaacttgacgtttct 612  Q
    ||||||||| | || || |||||||||| |||||||||||||||||| ||||||||||| || ||| | |  || |  | | ||||||||||||||||||    
T  43970 cattaaatgataatattttcacaaatatcggctaacaaattgccccctagaaacgttatgtttgaaatcttccttcgatcaagagaaacttgacgtttct 43871  T
Q  613 gaaattttttcgataaagtgcaattcctcagcatgacatcattcttttgacaacgggatatttcaaaaggtgcagaaccgtcttcataaggacttagtgg 712  Q
     |||   |||||||||||||  | || |  || |||||||| ||||||||||| |||||||||||||| ||   ||||||||| ||| ||  ||||||||    
T  43870 aaaa--atttcgataaagtgtgactcttatgcgtgacatcactcttttgacaaggggatatttcaaaa-gttttgaaccgtctccattagcgcttagtgg 43774  T
Q  713 gccat-accgtcattgggaaccatcaaaaaacaacttttccatgcaatgattgacatctgtcc 774  Q
    |||||    ||  |||||||| ||| |||||||||| |||||||| |||||| ||| ||||||    
T  43773 gccatgtttgttcttgggaactatc-aaaaacaactgttccatgcgatgatttacacctgtcc 43712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 118 - 549
Target Start/End: Complemental strand, 23177 - 22758
Alignment:
Q  118 tattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaag 217  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23177 tattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaag 23078  T
Q  218 tttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcgaatcaaaat 317  Q
    |||||||||||||||| ||||||||  ||||| |||||||||||||||||||||||| ||| ||||||||||||||||||| |||  ||||| |||||||    
T  23077 tttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatacaaataatcctataactacctaatcatatctattcgattcaaaat 22978  T
Q  318 cgaaactagccgttcacaaactagtcgtttgctaaccgcttggtcttatcaataaaacctgaagagcgcgtcgacaacttctttcatccgtcgaactaaa 417  Q
    ||||||||||               ||||||| ||||||||| || ||||   |||| || ||| | || |||| |||||| || | || |||||||  |    
T  22977 cgaaactagc---------------cgtttgccaaccgcttgatcctatccgcaaaatctaaag-gtgcttcgataacttcctttacccatcgaact-ga 22895  T
Q  418 aacaacgtcttcgattcctgctgaag---tacacttgtat-ttttcgatggatttccttcacaaagctacgcccca-tttttacgtcaaacccttgactg 512  Q
    |||||| |||||||||||||||||||   || |  | ||| |||||||||||||||||||||||| ||| | |||| |||||  ||||||||||||||||    
T  22894 aacaacttcttcgattcctgctgaaggcatatatatatatattttcgatggatttccttcacaaatctaagtcccactttttgggtcaaacccttgactg 22795  T
Q  513 cattaaatgctcatgttctcacaaatattggctaaca 549  Q
    ||||||||| | || || |||||||||| ||||||||    
T  22794 cattaaatgataatattttcacaaatatcggctaaca 22758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 166; Significance: 2e-88; HSPs: 3)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 91 - 331
Target Start/End: Complemental strand, 41512 - 41272
Alignment:
Q  91 taaattgcaaaagtgtttaaaagat-tgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcg 189  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||    
T  41512 taaattgcaaaagtgtttaaa-gatctgtattgaatttgtaaagacttaatgaaagttggtgcacatattcatactttgcaacttgtgactcgtttgtcg 41414  T
Q  190 cttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataact 289  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||    
T  41413 cttccatacggacagtattgagtgtaagtttttagtatgattaaattgtgacctgtttttcctaagaaaaactactatttatacaaatagtcctataact 41314  T
Q  290 acctaatcacatcctttcgaatcaaaatcgaaactagccgtt 331  Q
    ||||||||  | |  ||||| | |||||||||||||||||||    
T  41313 acctaatcgtacctgttcgatttaaaatcgaaactagccgtt 41272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 491 - 660
Target Start/End: Complemental strand, 41132 - 40965
Alignment:
Q  491 ttttacgtcaaacccttgactgcattaaatgctcatgttctcacaaatattggctaacaaattgccccccagaaacgttattttcgaactttctctccat 590  Q
    ||||| ||||| ||||||||||||||||||  |    || |||||| ||| |||||||||||||||||||||||||||||| ||  |||| | | || |     
T  41132 ttttaggtcaagcccttgactgcattaaataatagcattttcacaattatcggctaacaaattgccccccagaaacgttatgtttaaactctttttcga- 41034  T
Q  591 ttaggagaaacttgacgtttctgaaattttttcgataaagtgcaattcctcagcatgacatcattctttt 660  Q
    | | |||||||||||||||||||||||||||| ||||||||   | ||||| || |||||||| ||||||    
T  41033 tcaagagaaacttgacgtttctgaaatttttt-gataaagtatgactcctccgcgtgacatcactctttt 40965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 724 - 822
Target Start/End: Complemental strand, 40889 - 40791
Alignment:
Q  724 attgggaaccatcaaaaaacaacttttccatgcaatgattgacatctgtccagtatcaaaagctatgtatggccctgagtcatacttttactcttactt 822  Q
    |||||||||||||||||||||||| ||||| || ||| |||||||||||| |  |||||| ||||| |||| ||    |||||||||||||||| ||||    
T  40889 attgggaaccatcaaaaaacaactgttccacgcgatggttgacatctgtcaaacatcaaaggctatatatgacctcaggtcatacttttactctcactt 40791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 152; Significance: 5e-80; HSPs: 3)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 90 - 331
Target Start/End: Original strand, 8031 - 8274
Alignment:
Q  90 ttaaattgcaaaagtgttt-aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtc 188  Q
    ||||||||||||  ||||| |||||| ||||||||||||||||||||||| ||||| ||||| |||| |||||||| ||||||||||| |||||||||||    
T  8031 ttaaattgcaaagatgttttaaaagactgtattgaatttgtaaagacttactgaaaattggtgcacaaattcatactttgcaacttgtgactcgtttgtc 8130  T
Q  189 gcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataac 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||| |||||||||||||    
T  8131 gcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgttttttctaagaaaaactactatttatacaaatagtcctataac 8230  T
Q  289 tacctaatcacatcctttcga-atcaaaatcgaaactagccgtt 331  Q
    |||||||||| |||  |||||  | ||||||||| |||||||||    
T  8231 tacctaatcatatctgttcgatttgaaaatcgaacctagccgtt 8274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 90 - 331
Target Start/End: Original strand, 15161 - 15404
Alignment:
Q  90 ttaaattgcaaaagtgttt-aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtc 188  Q
    ||||||||||||  ||||| |||||| ||||||||||||||||||||||| ||||| ||||| |||| |||||||| ||||||||||| |||||||||||    
T  15161 ttaaattgcaaagatgttttaaaagactgtattgaatttgtaaagacttactgaaaattggtgcacaaattcatactttgcaacttgtgactcgtttgtc 15260  T
Q  189 gcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataac 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||| |||||||||||||    
T  15261 gcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgttttttctaagaaaaactactatttatacaaatagtcctataac 15360  T
Q  289 tacctaatcacatcctttcga-atcaaaatcgaaactagccgtt 331  Q
    |||||||||| |||  |||||  | ||||||||| |||||||||    
T  15361 tacctaatcatatctgttcgatttgaaaatcgaacctagccgtt 15404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #3
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 497 - 660
Target Start/End: Original strand, 15555 - 15715
Alignment:
Q  497 gtcaaacccttgactgcattaaatgctcatgttctcacaaatattggctaacaaattgccccccagaaacgttattttcgaactttctctccatttagga 596  Q
    ||||||||| ||||||||||||||| |  | || |||||||||| ||||||||| || ||||||||||||||||| ||  |||| | |  ||  | | ||    
T  15555 gtcaaacccgtgactgcattaaatgatagtattttcacaaatatcggctaacaattttccccccagaaacgttatgtttaaactct-ttaccgatcaaga 15653  T
Q  597 gaaacttgacgtttctgaaattttttcgataaagtgcaattcctcagcatgacatcattctttt 660  Q
    |||||||||||||||||||  |||||||||||| ||  | ||||||||||||||||||||||||    
T  15654 gaaacttgacgtttctgaa--tttttcgataaaatgtgactcctcagcatgacatcattctttt 15715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 150; Significance: 8e-79; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 150; E-Value: 8e-79
Query Start/End: Original strand, 118 - 331
Target Start/End: Original strand, 43100 - 43313
Alignment:
Q  118 tattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaag 217  Q
    ||||||||||||||||||||||||||| ||||| |||| |||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  43100 tattgaatttgtaaagacttaatgaaaattggtgcacagattcatactttgcaacttatgactcgtttgtcgcttccatacggacagtattgagtgtaag 43199  T
Q  218 tttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcgaatcaaaat 317  Q
    | |||||||||||||| ||||||||  ||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||  ||||| |||||||    
T  43200 tgtttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatacagataatcctataactacctaatcatatctattcgattcaaaat 43299  T
Q  318 cgaaactagccgtt 331  Q
    ||||||||||||||    
T  43300 cgaaactagccgtt 43313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 455 - 549
Target Start/End: Original strand, 43450 - 43545
Alignment:
Q  455 ttttcgatggatttccttcacaaagctacgcccca-tttttacgtcaaacccttgactgcattaaatgctcatgttctcacaaatattggctaaca 549  Q
    |||||||||||||||||||||||||||| | |||| |||||  ||||||||||||||||||||||||| | || || |||||||||| ||||||||    
T  43450 ttttcgatggatttccttcacaaagctaagtcccactttttgggtcaaacccttgactgcattaaatgataatattttcacaaatatcggctaaca 43545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 148; Significance: 1e-77; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 91 - 298
Target Start/End: Original strand, 20506271 - 20506478
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  ||||||||  | ||||||||| ||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  20506271 taaattgcaaagatgtttaaagaaatgtattgaaattgcaaagacttaatgaaagttggtgcacatattcatactttgcaacttgtaactcgtttgtcgc 20506370  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataacta 290  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||| |||||||||||||||||||||||| |||| ||||||||||    
T  20506371 ttccatacggacagtattgagtgtaagttttgagtatgattgaattgtgacctgtttttcctaagaaaaactactatttatacaaatagacctataacta 20506470  T
Q  291 cctaatca 298  Q
    ||||||||    
T  20506471 cctaatca 20506478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 91 - 298
Target Start/End: Original strand, 21982565 - 21982772
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  ||||||||  | ||||||||||||||||||||||||||||| ||||| |||||||||||||  |||||||||| |||||||||||||    
T  21982565 taaattgcaaagatgtttaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactctgcaacttgtgactcgtttgtcgc 21982664  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataacta 290  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||| | |||||||||||||||    
T  21982665 ttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacctatttttcctaagaaaaactactatttatataaatagtcctataacta 21982764  T
Q  291 cctaatca 298  Q
    ||||||||    
T  21982765 cctaatca 21982772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 91 - 298
Target Start/End: Complemental strand, 21530485 - 21530278
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  |||| |||  | ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||    
T  21530485 taaattgcaaagttgttcaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgc 21530386  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataacta 290  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||||| ||||||||||| |||| |||||||||     
T  21530385 ttccatacggatagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatttatacaaatagacctataactg 21530286  T
Q  291 cctaatca 298  Q
    ||||||||    
T  21530285 cctaatca 21530278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 91 - 298
Target Start/End: Original strand, 26274049 - 26274256
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  |||| |||  | ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| ||||||||||| |    
T  26274049 taaattgcaaagttgttcaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcac 26274148  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataacta 290  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||||| ||||||||||| |||| |||||||||     
T  26274149 ttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatttatacaaatagacctataactg 26274248  T
Q  291 cctaatca 298  Q
    ||||||||    
T  26274249 cctaatca 26274256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 151 - 298
Target Start/End: Complemental strand, 21504758 - 21504611
Alignment:
Q  151 acacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctctttttt 250  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||     
T  21504758 acacatattcatactttgcaacttgttactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttc 21504659  T
Q  251 ctaagaaaaactactatttatacagatagtcctataactacctaatca 298  Q
    |||||||||||| ||||||||||| |||| ||||||||| ||||||||    
T  21504658 ctaagaaaaacttctatttatacaaatagacctataactgcctaatca 21504611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 146 - 279
Target Start/End: Original strand, 20024462 - 20024593
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||||||||||||||||||||||| |||||||| || ||||||| |||| | | |||||||||||||||| |||||||||| |||||||| ||    
T  20024462 ttggtacacatattcatacattgcaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttt-gtatgattgaattgtgacc-ct 20024558  T
Q  246 tttttc-taagaaaaactactatttatacagatag 279  Q
    |||| | ||||| ||||||||||||||||||||||    
T  20024559 ttttccttaagagaaactactatttatacagatag 20024593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 91 - 190
Target Start/End: Complemental strand, 21507975 - 21507876
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  |||| |||  | ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||    
T  21507975 taaattgcaaagttgttcaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgc 21507876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 146 - 279
Target Start/End: Complemental strand, 18156269 - 18156137
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    |||||||||| |||||||||||||||||||| |||||||| || ||||||| |||| | | |||||||||||||||  |||||||||  ||||||||| |    
T  18156269 ttggtacacagattcatacattgcaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttgtgtatgattggattgtgaccttt 18156171  T
Q  246 tttttctaagaaaaactactatttatacagatag 279  Q
    |||   || ||||| |||||||||||||| ||||    
T  18156170 tttccttaggaaaagctactatttatacaaatag 18156137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 146 - 274
Target Start/End: Complemental strand, 40933004 - 40932877
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||||||||||||||||||||||| |||||||| || ||||||| | || | | |||||||| ||||||| ||||||| || ||||||||  |    
T  40933004 ttggtacacatattcatacattgcaacttgtgactcgtttatctcttccatgcagataat-ttgagtgttagttttttgtatgatagaattgtgaccctt 40932906  T
Q  246 tttttctaagaaaaactactatttataca 274  Q
    |||  ||| | ||||||||||||||||||    
T  40932905 tttccctagggaaaactactatttataca 40932877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 146 - 268
Target Start/End: Complemental strand, 10624430 - 10624309
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||| ||||||||||||||||||| |||| ||| || ||||||| |||| | | |||||||||||||||| ||||||| || |||||||| ||    
T  10624430 ttggtacacatgttcatacattgcaacttgtgactcatttatctcttccatgcggataat-ttgagtgtaagttttt-gtatgatagaattgtgacc-ct 10624334  T
Q  246 ttttt--ctaagaaaaactactatt 268  Q
    |||||  ||| ||||||||||||||    
T  10624333 tttttccctaggaaaaactactatt 10624309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 497 - 568
Target Start/End: Complemental strand, 21530096 - 21530025
Alignment:
Q  497 gtcaaacccttgactgcattaaatgctcatgttctcacaaatattggctaacaaattgccccccagaaacgt 568  Q
    |||||||| |||||||||||||||| |    || ||||||||||||||||||||||||||||||||||||||    
T  21530096 gtcaaacctttgactgcattaaatgatagccttttcacaaatattggctaacaaattgccccccagaaacgt 21530025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 232
Target Start/End: Complemental strand, 16832234 - 16832149
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattg 232  Q
    ||||||||||| ||||||||||||||||||| |||||||| || |||| || |||| | | |||||||||||||||  |||||||||    
T  16832234 ttggtacacatgttcatacattgcaacttgtgactcgtttctctcttcaatgcggataat-ttgagtgtaagttttgtgtatgattg 16832149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 724 - 822
Target Start/End: Complemental strand, 21529864 - 21529767
Alignment:
Q  724 attgggaaccatcaaaaaacaacttttccatgcaatgattgacatctgtccagtatcaaaagctatgtatggccctgagtcatacttttactcttactt 822  Q
    |||||||||||||||||| ||||  |||||||| ||  |||||||||||| | ||||||| ||||| |||| || || ||| |||||||||||| ||||    
T  21529864 attgggaaccatcaaaaa-caaccgttccatgcgatcgttgacatctgtcaaatatcaaaggctatatatgaccttgggtcgtacttttactctcactt 21529767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 207 - 271
Target Start/End: Complemental strand, 19212441 - 19212377
Alignment:
Q  207 ttgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttat 271  Q
    ||||||||||||||||  ||||||||| ||||||||| ||||| ||| ||||||||  |||||||    
T  19212441 ttgagtgtaagttttttatatgattgaattgtgacctgtttttcctatgaaaaactgatatttat 19212377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 144; Significance: 3e-75; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 91 - 294
Target Start/End: Original strand, 8713 - 8916
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  ||||||||  | ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||    
T  8713 taaattgcaaagatgtttaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgc 8812  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataacta 290  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||| |||| | ||||||||    
T  8813 ttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacctgtttttcctaagaaaaactactatttatacaaatagacttataacta 8912  T
Q  291 ccta 294  Q
    ||||    
T  8913 ccta 8916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 140; Significance: 7e-73; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 91 - 294
Target Start/End: Original strand, 118321 - 118524
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    ||||||||||| |||||||||  | ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||     
T  118321 taaattgcaaaggtgtttaaagaaatgtattgaatttgtaaagacttaatgaaagttggtgcacatattcatactttgcaacttgtgactcgtttgtcga 118420  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataacta 290  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||||||  ||||| |||||||||||||||||||||||| |||| ||||||||||    
T  118421 ttccatacggacagtattgagtgtaagttttgcgtatgattgaattgtgacccgtttttcctaagaaaaactactatttatacaaatagacctataacta 118520  T
Q  291 ccta 294  Q
    ||||    
T  118521 ccta 118524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 91 - 294
Target Start/End: Original strand, 142172 - 142374
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    ||||||||||| |||||||||  | ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||    
T  142172 taaattgcaaa-gtgtttaaagaaatgtattgaatttgtaaagacttaatgaaagttggtgcacatattcatactttgcaacttgtgactcgtttgtcgc 142270  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataacta 290  Q
    ||||||||||||||||||||||||||||||| | ||||||||| ||||||||  ||||| |||||||||||||||||||||||| |||| ||||||||||    
T  142271 ttccatacggacagtattgagtgtaagttttgaatatgattgaattgtgacccgtttttcctaagaaaaactactatttatacaaatagacctataacta 142370  T
Q  291 ccta 294  Q
    ||||    
T  142371 ccta 142374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 497 - 616
Target Start/End: Original strand, 118640 - 118759
Alignment:
Q  497 gtcaaacccttgactgcattaaatgctcatgttctcacaaatattggctaacaaattgccccccagaaacgttattttcgaact-ttctctccatttagg 595  Q
    |||||||| |||||||||||||||| |    || ||||||||||||||||||||||| ||||||||||||||||| || |||||  ||| || | | | |    
T  118640 gtcaaacctttgactgcattaaatgatacccttttcacaaatattggctaacaaatttccccccagaaacgttatgtttgaactcgtctttcga-tcaag 118738  T
Q  596 agaaacttgacgtttctgaaa 616  Q
    |||||||||||||||||||||    
T  118739 agaaacttgacgtttctgaaa 118759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 722 - 815
Target Start/End: Original strand, 118869 - 118961
Alignment:
Q  722 tcattgggaaccatcaaaaaacaacttttccatgcaatgattgacatctgtccagtatcaaaagctatgtatggccctgagtcatacttttact 815  Q
    |||||||||||||| ||||||||||  |||||||  || | ||||||||||| | ||||||| ||||| |||| || |||||||||||||||||    
T  118869 tcattgggaaccat-aaaaaacaaccgttccatgagattaatgacatctgtcaaatatcaaaggctatatatgaccttgagtcatacttttact 118961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 136; Significance: 2e-70; HSPs: 8)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 91 - 298
Target Start/End: Complemental strand, 62322 - 62115
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  ||||||||  | ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| | |||||||||||    
T  62322 taaattgcaaagatgtttaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgattcgtttgtcgc 62223  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataacta 290  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||||| |||| ||||||||||    
T  62222 ttccatacggacaatattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatacaaatagacctataacta 62123  T
Q  291 cctaatca 298  Q
    || |||||    
T  62122 cccaatca 62115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 91 - 298
Target Start/End: Complemental strand, 85183 - 84976
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  ||||||||  | |||||||||||||||||||||||||| || ||||| ||||||||||||| ||||||||||| |||||||||||||    
T  85183 taaattgcaaagatgtttaaagaaatgtattgaatttgtaaagacttaatggaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgc 85084  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataacta 290  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||  ||||| |||||||||||||||||||||||| |||| ||||||||||    
T  85083 ttccatacggacagtattgagtgtaagttcttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatacaaatagacctataacta 84984  T
Q  291 cctaatca 298  Q
    || |||||    
T  84983 cccaatca 84976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 91 - 289
Target Start/End: Complemental strand, 71500 - 71302
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  ||||||||  | ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| | |||||||||||    
T  71500 taaattgcaaagatgtttaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgattcgtttgtcgc 71401  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataact 289  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||||| |||| |||||||||    
T  71400 ttccatacggacaatattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatacaaatagacctataact 71302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 91 - 279
Target Start/End: Original strand, 6611 - 6799
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  ||||||||  | ||||||||| ||||| ||||||||||||| ||||| ||||| ||||||| ||||||||||| |||||||||||||    
T  6611 taaattgcaaagatgtttaaagaaatgtattgaaattgtatagacttaatgaaaattggtgcacatgttcatactttgcaacttgtgactcgtttgtcgc 6710  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatag 279  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||| | |||||| |||||||||||||||||||||||| ||||    
T  6711 ttccatacggacagtattgagtgtaagttttttgtatgattgaattgtgatccctttttcctaagaaaaactactatttatacaaatag 6799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 91 - 279
Target Start/End: Complemental strand, 22796 - 22608
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  ||||||||  | ||||||||| ||  | ||||||||||||| ||||| ||||| ||||||| ||||||||||| |||||||||||||    
T  22796 taaattgcaaagatgtttaaagaaatgtattgaaattaaatagacttaatgaaaattggtgcacatgttcatactttgcaacttgtgactcgtttgtcgc 22697  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatag 279  Q
    |||||||||||||||||||||||||||||||||||||||| || || |||||  ||||| |||||||||||||||||||| ||| ||||    
T  22696 ttccatacggacagtattgagtgtaagtttttagtatgatcgaattatgacccgtttttcctaagaaaaactactatttacacaaatag 22608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 116 - 198
Target Start/End: Complemental strand, 116558 - 116476
Alignment:
Q  116 tgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatac 198  Q
    ||||||||| ||| |  |||| |||| |||||||||||||||||||||||||||||||||| |||||||  ||||||||||||    
T  116558 tgtattgaaattgcattgactgaatgtaagttggtacacatattcatacattgcaacttgtgactcgttcatcgcttccatac 116476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 531 - 616
Target Start/End: Complemental strand, 84791 - 84706
Alignment:
Q  531 tcacaaatattggctaacaaattgccccccagaaacgttattttcgaact-ttctctccatttaggagaaacttgacgtttctgaaa 616  Q
    ||||||||||||||||||||||||||||||||||||||||| ||  |||| |||| || | | | ||||||||||||||||||||||    
T  84791 tcacaaatattggctaacaaattgccccccagaaacgttatgtttaaactcttctttcga-tcacgagaaacttgacgtttctgaaa 84706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 22382 - 22334
Alignment:
Q  531 tcacaaatattggctaacaaattgccccccagaaacgttattttcgaact 580  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  22382 tcacaaatattggctaacaaattgc-ccccagaaacgttatgttcgaact 22334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 135; Significance: 7e-70; HSPs: 8)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 116 - 298
Target Start/End: Original strand, 25068 - 25250
Alignment:
Q  116 tgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgta 215  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25068 tgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgttactcgtttgtcgcttccatacggacagtattgagtgta 25167  T
Q  216 agtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatca 298  Q
    |||||||||||||||||| ||||||||  ||||| |||||||||||| ||||||||||| |||| ||||||||| ||||||||    
T  25168 agtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatttatacaaatagacctataactgcctaatca 25250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 116 - 298
Target Start/End: Original strand, 28566 - 28748
Alignment:
Q  116 tgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgta 215  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28566 tgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgttactcgtttgtcgcttccatacggacagtattgagtgta 28665  T
Q  216 agtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaatca 298  Q
    |||||||||||||||||| ||||||||  ||||| |||||||||||| ||||||||||| |||| ||||||||| ||||||||    
T  28666 agtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatttatacaaatagacctataactgcctaatca 28748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 91 - 298
Target Start/End: Original strand, 115300 - 115507
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  |||| |||  | ||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||| || ||| |||||||||    
T  115300 taaattgcaaagatgttcaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaactggtgacttgtttgtcgc 115399  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataacta 290  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||||| ||||||||||| |||| |||||||||     
T  115400 ttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatttatacaaatagacctataactg 115499  T
Q  291 cctaatca 298  Q
    ||||||||    
T  115500 cctaatca 115507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 91 - 298
Target Start/End: Original strand, 129852 - 130058
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  |||| |||  | ||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||| || ||| |||||||||    
T  129852 taaattgcaaagatgttcaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaactggtgacttgtttgtcgc 129951  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataacta 290  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||| |||||||||||| ||||||||||| |||| |||||||||     
T  129952 ttccatacggacagtattgagtgtaagtttttagtatgattgaattgtga-ctgtttttcctaagaaaaacttctatttatacaaatagacctataactg 130050  T
Q  291 cctaatca 298  Q
    ||||||||    
T  130051 cctaatca 130058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 91 - 294
Target Start/End: Complemental strand, 390259 - 390056
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  ||||||||  | ||||||||| ||| ||||| ||||||||| ||||| ||||||||||||| ||||||||||| ||||||||||| |    
T  390259 taaattgcaaagatgtttaaagaaatgtattgaaattgcaaagatttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtctc 390160  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataacta 290  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||  ||||| ||||||||||||| |||||||| | |||| ||||||||||    
T  390159 ttccatacggacagtattgagtgtaagttttgagtatgattgaattgtgacccgtttttcctaagaaaaactaatatttatagaaatagacctataacta 390060  T
Q  291 ccta 294  Q
    ||||    
T  390059 ccta 390056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #6
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 497 - 580
Target Start/End: Complemental strand, 389886 - 389803
Alignment:
Q  497 gtcaaacccttgactgcattaaatgctcatgttctcacaaatattggctaacaaattgccccccagaaacgttattttcgaact 580  Q
    |||||||||||||||| |||||||| |    || |||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  389886 gtcaaacccttgactgtattaaatgatacccttttcacaaatattggctaacaaattgccccgcagaaacgttatgttcgaact 389803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 509 - 571
Target Start/End: Original strand, 115696 - 115758
Alignment:
Q  509 actgcattaaatgctcatgttctcacaaatattggctaacaaattgccccccagaaacgttat 571  Q
    ||||||||||||| | |  || |||||||||||||||||||||||||||||||||||||||||    
T  115696 actgcattaaatgataaacttttcacaaatattggctaacaaattgccccccagaaacgttat 115758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 725 - 822
Target Start/End: Original strand, 115915 - 116011
Alignment:
Q  725 ttgggaaccatcaaaaaacaacttttccatgcaatgattgacatctgtccagtatcaaaagctatgtatggccctgagtcatacttttactcttactt 822  Q
    ||||||||||| ||||||||||  |||||||| || ||||||||||||| | ||||||| ||||| |||  || || |||||||||||||||| ||||    
T  115915 ttgggaaccat-aaaaaacaaccgttccatgcgatcattgacatctgtcaaatatcaaaggctatatataaccttgggtcatacttttactctcactt 116011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0304 (Bit Score: 134; Significance: 3e-69; HSPs: 2)
Name: scaffold0304
Description:

Target: scaffold0304; HSP #1
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 85 - 289
Target Start/End: Original strand, 5727 - 5932
Alignment:
Q  85 aagacttaaattgcaaaagtgttt-aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgt 183  Q
    ||||||||||||||||| |||||| |||| | ||||||||||||||||||||||||||||| ||||| |||| |||||||| ||||||||||| ||||||    
T  5727 aagacttaaattgcaaaggtgttttaaaaaactgtattgaatttgtaaagacttaatgaaaattggtgcacagattcatactttgcaacttgtgactcgt 5826  T
Q  184 ttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcct 283  Q
    ||||||||||||||||||||  ||| |||||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||||| ||||||||    
T  5827 ttgtcgcttccatacggacaaaattaagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatacaaatagtcct 5926  T
Q  284 ataact 289  Q
    ||||||    
T  5927 ataact 5932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0304; HSP #2
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 497 - 660
Target Start/End: Original strand, 6127 - 6288
Alignment:
Q  497 gtcaaacccttgactgcattaaatgctcatgttctcacaaatattggctaacaaattgccccccagaaacgttattttcgaactttctctccatttagga 596  Q
    ||||||||||||||||||||||||| |  | || |||||||||| |||||||||||||||||||| ||||||||| ||  |||| | | |||  | | ||    
T  6127 gtcaaacccttgactgcattaaatgatagtattttcacaaatatcggctaacaaattgccccccataaacgttatgtttaaactct-tttccgatcaaga 6225  T
Q  597 gaaacttgacgtttctgaaattttttcgataaagtgcaattcctcagcatgacatcattctttt 660  Q
    ||||||||||||||||| ||| ||||||||||| |   | |||||||| |||||||||||||||    
T  6226 gaaacttgacgtttctg-aatattttcgataaaatatgactcctcagcgtgacatcattctttt 6288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 132; Significance: 4e-68; HSPs: 4)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 91 - 294
Target Start/End: Original strand, 151355 - 151558
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  ||||||||  | ||||||||| ||| ||||||||||||||| ||||| ||||| ||||||| ||||||||||| |||||||||||||    
T  151355 taaattgcaaagatgtttaaagaaatgtattgaaattgcaaagacttaatgaaaattggtgcacatgttcatactttgcaacttgtgactcgtttgtcgc 151454  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataacta 290  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||| |||| ||||||||||    
T  151455 ttccatacggatagtattgagtgtaagtttttagtatgattgaattgtgacccctttttcctaagaaaaactactatttatacaaataggcctataacta 151554  T
Q  291 ccta 294  Q
    ||||    
T  151555 ccta 151558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 161700 - 161829
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  ||||||||  | ||||||||| ||| ||||||||||||||| ||||| ||||| ||||||| ||||||||||| |||| ||||||||    
T  161700 taaattgcaaagatgtttaaagaaatgtattgaaattgcaaagacttaatgaaaattggtgcacatgttcatactttgcaacttgtgactcatttgtcgc 161799  T
Q  191 ttccatacggacagtattgagtgtaagttt 220  Q
    |||||||| |||||||||||||||||||||    
T  161800 ttccatacagacagtattgagtgtaagttt 161829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 212 - 294
Target Start/End: Original strand, 162035 - 162117
Alignment:
Q  212 tgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactaccta 294  Q
    ||||| |||||||||||||| | |||||||| |||||| |||||||||||||||||||||||| |||| ||||||||||||||    
T  162035 tgtaattttttagtatgatttaattgtgacccctttttcctaagaaaaactactatttatacaaataggcctataactaccta 162117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 151769 - 151818
Alignment:
Q  531 tcacaaatattggctaacaaattgccccccagaaacgttattttcgaact 580  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||||||||    
T  151769 tcacaaatattggctaacaaatttccccccagaaacattatgttcgaact 151818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 129; Significance: 3e-66; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 116 - 296
Target Start/End: Original strand, 44240 - 44420
Alignment:
Q  116 tgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgta 215  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44240 tgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgta 44339  T
Q  216 agtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataactacctaat 296  Q
    ||||||| |||||||||| ||||||||| ||||| |||||||||||| ||||||||||| |||  ||||||||| ||||||    
T  44340 agttttttgtatgattgaattgtgacctgtttttcctaagaaaaactcctatttatacaaatacacctataactgcctaat 44420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 497 - 571
Target Start/End: Original strand, 44598 - 44672
Alignment:
Q  497 gtcaaacccttgactgcattaaatgctcatgttctcacaaatattggctaacaaattgccccccagaaacgttat 571  Q
    |||||||| |||||||||||||||| |    |  |||||||||||||||||||||||||||||||||||||||||    
T  44598 gtcaaacctttgactgcattaaatgatagcctcttcacaaatattggctaacaaattgccccccagaaacgttat 44672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 724 - 822
Target Start/End: Original strand, 44829 - 44926
Alignment:
Q  724 attgggaaccatcaaaaaacaacttttccatgcaatgattgacatctgtccagtatcaaaagctatgtatggccctgagtcatacttttactcttactt 822  Q
    |||||||||||| ||||||||||  | |||||| || | ||||||||||| | ||||||| ||||| |||| || ||||||||||||||||||||||||    
T  44829 attgggaaccat-aaaaaacaaccgtcccatgcgatcaatgacatctgtcaaatatcaaaggctatatatgaccttgagtcatacttttactcttactt 44926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 128; Significance: 1e-65; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 91 - 298
Target Start/End: Complemental strand, 25258 - 25051
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  |||| |||  | ||||||||| ||||||||||||||| ||| ||||| || |||||||||| ||||||||||| |||||||||||||    
T  25258 taaattgcaaagatgttcaaagaaatgtattgaacttgtaaagacttaataaaaattggtgcatatattcatactttgcaacttgtgactcgtttgtcgc 25159  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataacta 290  Q
     |||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||||| |||| ||||||||||    
T  25158 atccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccatttttcctaagaaaaactactatttatacaaatagacctataacta 25059  T
Q  291 cctaatca 298  Q
    ||||||||    
T  25058 cctaatca 25051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 497 - 571
Target Start/End: Complemental strand, 24875 - 24800
Alignment:
Q  497 gtcaaacccttgactgcattaaatgctcatgttctcacaaatattggctaacaaattgcc-ccccagaaacgttat 571  Q
    ||||| || |||||||||||||||| |    || |||||||||||||||||||||||||| |||||||||||||||    
T  24875 gtcaagcctttgactgcattaaatgatagccttttcacaaatattggctaacaaattgcccccccagaaacgttat 24800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 128; Significance: 1e-65; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 91 - 298
Target Start/End: Complemental strand, 2609 - 2402
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  |||| |||  | |||||||||||| |||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||    
T  2609 taaattgcaaagatgttcaaagaaatgtattgaatttataaagacttaatgaaaattggtgcacatattcatactttgcaacttgtaactcgtttgtcgc 2510  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataacta 290  Q
    ||||||||||||||||||||| |||||||||| |||||||||| ||||||||  |||||  ||||||||||| ||||||||||| ||| |||||||||||    
T  2509 ttccatacggacagtattgagggtaagtttttggtatgattgaattgtgacccgtttttcttaagaaaaacttctatttatacaaataatcctataacta 2410  T
Q  291 cctaatca 298  Q
    ||||||||    
T  2409 cctaatca 2402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 128; Significance: 1e-65; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 91 - 298
Target Start/End: Original strand, 18453 - 18660
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  |||| |||  | ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||| ||||||| |||||||||||||    
T  18453 taaattgcaaagatgttcaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgtaacttgtgactcgtttgtcgc 18552  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataacta 290  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||||| |||||| |||| |||| |||||||||     
T  18553 ttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatttctacaaatagacctataactg 18652  T
Q  291 cctaatca 298  Q
    ||||||||    
T  18653 cctaatca 18660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 91 - 298
Target Start/End: Original strand, 27984 - 28191
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  |||| |||  | ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||| ||||||| |||||||||||||    
T  27984 taaattgcaaagatgttcaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgtaacttgtgactcgtttgtcgc 28083  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataacta 290  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||||| |||||| |||| |||| |||||||||     
T  28084 ttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatttctacaaatagacctataactg 28183  T
Q  291 cctaatca 298  Q
    ||||||||    
T  28184 cctaatca 28191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 126; Significance: 2e-64; HSPs: 3)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 11145 - 11322
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    |||||| |||| || |||||||| ||||||||||||| ||| | ||| ||||||||||||||||||||||||||| ||||||| |||| |||||||||||    
T  11145 aatccgggttgaatccaatcgaaattctgtaaataatgacagtaaaaggaagtactttgaaaagacttagtaaaacaagacttgaattacaaaagtgttt 11244  T
Q  109 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttg 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  11245 aaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatactttgcaacttgtgactcgtttg 11322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 428 - 559
Target Start/End: Original strand, 11381 - 11511
Alignment:
Q  428 tcgattcctgctgaagtacacttgtatttttcgatggatttccttcacaaagctacgccccatttttacgtcaaacccttgactgcattaaatgctcatg 527  Q
    |||||||| ||||| ||||   ||||||| |||||||||||| ||||||||||||||||||| ||||  ||||||||||||||||||||||||| ||||     
T  11381 tcgattcccgctgaggtacttatgtatttgtcgatggatttc-ttcacaaagctacgccccaattttgggtcaaacccttgactgcattaaatgatcata 11479  T
Q  528 ttctcacaaatattggctaacaaattgccccc 559  Q
    || |||||||||||| ||||||||||||||||    
T  11480 ttttcacaaatattgactaacaaattgccccc 11511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 342 - 411
Target Start/End: Original strand, 11316 - 11384
Alignment:
Q  342 tcgtttgctaaccgcttggtcttatcaataaaacctgaagagcgcgtcgacaacttctttcatccgtcga 411  Q
    |||||||||||||||||||||||||| |  | || ||||| ||||||| |||||||||||||||||||||    
T  11316 tcgtttgctaaccgcttggtcttatctaccagacttgaag-gcgcgtctacaacttctttcatccgtcga 11384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 124; Significance: 2e-63; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 91 - 294
Target Start/End: Complemental strand, 15892 - 15689
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  ||||||||  | ||||||||| ||| ||||||||||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||    
T  15892 taaattgcaaagatgtttaaagaaatgtattgaaattgcaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgc 15793  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataacta 290  Q
    ||||||||||| ||||||||||||||||||| ||||||||||| ||||||||  ||||| |||||||||||||||||||||| | |||| ||||||||||    
T  15792 ttccatacggatagtattgagtgtaagttttgagtatgattgatttgtgacccgtttttcctaagaaaaactactatttatagaaatagacctataacta 15693  T
Q  291 ccta 294  Q
    ||||    
T  15692 ccta 15689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 120; Significance: 6e-61; HSPs: 3)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 91 - 298
Target Start/End: Original strand, 26731 - 26938
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  |||| |||  | ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| | |||||||||||    
T  26731 taaattgcaaagttgttcaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgaatcgtttgtcgc 26830  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcctataacta 290  Q
      ||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||||  ||||||||||| |||| |||||||||     
T  26831 aaccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacccctatttatacaaatagacctataactg 26930  T
Q  291 cctaatca 298  Q
    ||||||||    
T  26931 cctaatca 26938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 724 - 818
Target Start/End: Original strand, 27343 - 27436
Alignment:
Q  724 attgggaaccatcaaaaaacaacttttccatgcaatgattgacatctgtccagtatcaaaagctatgtatggccctgagtcatacttttactctt 818  Q
    |||||||||||| ||||||||||| | |||||| || ||||||||||||| | ||||||| ||||| |||| || ||||||||||||||||||||    
T  27343 attgggaaccat-aaaaaacaactgtcccatgcgatcattgacatctgtcaaatatcaaaggctatatatgaccttgagtcatacttttactctt 27436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 497 - 571
Target Start/End: Original strand, 27113 - 27187
Alignment:
Q  497 gtcaaacccttgactgcattaaatgctcatgttctcacaaatattggctaacaaattgccccccagaaacgttat 571  Q
    |||||||| |||||||||||||||| |    |  |||||||||||||||||||||||| ||||||||||||||||    
T  27113 gtcaaacctttgactgcattaaatgatagcctcttcacaaatattggctaacaaattgtcccccagaaacgttat 27187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 120; Significance: 6e-61; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 91 - 270
Target Start/End: Complemental strand, 63951 - 63772
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  ||||||||  | ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||    
T  63951 taaattgcaaagatgtttaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgc 63852  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactattta 270  Q
    |||||||||||||||||| ||||||| |||||||||||||||| ||||||||  ||||| ||||||||||||||||||||    
T  63851 ttccatacggacagtattaagtgtaaatttttagtatgattgaattgtgacccgtttttcctaagaaaaactactattta 63772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 113; Significance: 9e-57; HSPs: 2)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 91 - 279
Target Start/End: Original strand, 1174 - 1362
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  ||||||||  | ||||||||| ||| |  |||||||||||| ||||| ||||| ||||||| ||||||||||| |||||||||||||    
T  1174 taaattgcaaagatgtttaaagaaatgtattgaaattgcattgacttaatgaaaattggtgcacatgttcatactttgcaacttgtgactcgtttgtcgc 1273  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatag 279  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||| ||||    
T  1274 ttccatacggacagtatttagtgtaagtttttagtatgattgaattgtgacctgtttttcctaagaaaaactactatttatacaaatag 1362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509; HSP #2
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 91 - 279
Target Start/End: Original strand, 7602 - 7790
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  ||||||||  | ||||||||| ||| |  |||||||||||| ||||| ||||| ||||||| ||||||||||| |||||||||||||    
T  7602 taaattgcaaagatgtttaaagaaatgtattgaaattgcattgacttaatgaaaattggtgcacatgttcatactttgcaacttgtgactcgtttgtcgc 7701  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatag 279  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||| ||||    
T  7702 ttccatacggacagtatttagtgtaagtttttagtatgattgaattgtgacctgtttttcctaagaaaaactactatttatacaaatag 7790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 109; Significance: 2e-54; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 91 - 279
Target Start/End: Complemental strand, 30767 - 30579
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  ||||||||  | ||||||||| ||  |  |||||||||||| ||||| ||||| ||||||| ||||||||||| |||||||||||||    
T  30767 taaattgcaaagatgtttaaagaaatgtattgaaatttcattgacttaatgaaaattggtgcacatgttcatactttgcaacttgtgactcgtttgtcgc 30668  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatag 279  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||||| ||||    
T  30667 ttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatacaaatag 30579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 30349 - 30300
Alignment:
Q  531 tcacaaatattggctaacaaattgccccccagaaacgttattttcgaact 580  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30349 tcacaaatattggctaacaaattgccccccagaaacgttatgttcgaact 30300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 108; Significance: 9e-54; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 595 - 822
Target Start/End: Complemental strand, 79474 - 79249
Alignment:
Q  595 gagaaacttgacgtttctgaaattttttcgataaagtgcaattcctcagcatgacatcattcttttgacaacgggatatttcaaaaggtgcagaaccgtc 694  Q
    |||||||||||  ||||||||| |||| ||||||||||  | ||||||||||||||||||||||||||||| || ||||||||||||||    |||||||    
T  79474 gagaaacttgaaatttctgaaaatttt-cgataaagtgtgactcctcagcatgacatcattcttttgacaaaggaatatttcaaaaggttttaaaccgtc 79376  T
Q  695 ttcataaggacttagtgggccataccgtcattgggaaccatcaaaaaacaacttttccatgcaatgattgacatctgtccagtatcaaaagctatgtatg 794  Q
    ||||| || ||||||||||||||   ||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||  |||||| ||||| ||||    
T  79375 ttcatcagaacttagtgggccatgttgtcattgggaaccat-aaaaaacaactgttccatgcgatgattgacatctgtccaacatcaaaggctatatatg 79277  T
Q  795 gccctgagtcatacttttactcttactt 822  Q
     |||| || |||||||||||||||||||    
T  79276 accctaagccatacttttactcttactt 79249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 101; Significance: 1e-49; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 91 - 279
Target Start/End: Complemental strand, 32253 - 32065
Alignment:
Q  91 taaattgcaaaagtgtttaaaagattgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgc 190  Q
    |||||||||||  ||||||||  | ||| ||||| ||| |  |||||||||||| ||||| ||||| ||||||| ||||||||| | |||||||||||||    
T  32253 taaattgcaaagatgtttaaagaaatgtgttgaaattgcattgacttaatgaaaattggtgcacatgttcatactttgcaacttttgactcgtttgtcgc 32154  T
Q  191 ttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatag 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||||| ||||    
T  32153 ttccatacggacaatattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatacaaatag 32065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 98; Significance: 8e-48; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 138 - 279
Target Start/End: Original strand, 45235 - 45376
Alignment:
Q  138 aatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttg 237  Q
    |||| |||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||| |||    
T  45235 aatgtaagttggtgcacatattcatacattgcaacttgtgactcgtttgccgcttccatacggacaatattgagcgtaagtttttagtatgattgaattg 45334  T
Q  238 tgacctcttttttctaagaaaaactactatttatacagatag 279  Q
    |||||  ||||| |||||||||||||||||||||||| ||||    
T  45335 tgacccttttttcctaagaaaaactactatttatacaaatag 45376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 93; Significance: 8e-45; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 166 - 294
Target Start/End: Complemental strand, 1834 - 1706
Alignment:
Q  166 ttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactact 265  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||  ||||| |||||||||||||||    
T  1834 ttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagcataagtttttagtatgattgaattgtgacccatttttcctaagaaaaactact 1735  T
Q  266 atttatacagatagtcctataactaccta 294  Q
    ||||||||| |||| ||||||||||||||    
T  1734 atttatacaaataggcctataactaccta 1706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 90; Significance: 5e-43; HSPs: 2)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 138 - 279
Target Start/End: Original strand, 16995 - 17136
Alignment:
Q  138 aatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttg 237  Q
    |||| |||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||| ||| ||||||| | ||||||||||||||||||| |||    
T  16995 aatgtaagttggtgcacatgttcatacattgcaacttgtgactcgtttgtcgcttccatacgaacaatattgagcgcaagtttttagtatgattgaattg 17094  T
Q  238 tgacctcttttttctaagaaaaactactatttatacagatag 279  Q
    |||||  ||||||||||||||||||||| |||||||| ||||    
T  17095 tgaccctttttttctaagaaaaactactctttatacaaatag 17136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 533 - 580
Target Start/End: Original strand, 17392 - 17440
Alignment:
Q  533 acaaatattggctaacaaattg-ccccccagaaacgttattttcgaact 580  Q
    ||||||||||| |||||||||| ||||||||||||||||| ||||||||    
T  17392 acaaatattggataacaaattgcccccccagaaacgttatgttcgaact 17440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 86; Significance: 1e-40; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 133 - 274
Target Start/End: Original strand, 33335 - 33475
Alignment:
Q  133 gacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattg 232  Q
    |||| |||| ||||||||||||||||||||||||| |||||||| |||||||| ||||||||||| ||| ||| ||||| ||||||||||||||||||||    
T  33335 gactgaatgtaagttggtacacatattcatacattccaacttgtgactcgtttatcgcttccatatggatagt-ttgagcgtaagtttttagtatgattg 33433  T
Q  233 agttgtgacctcttttttctaagaaaaactactatttataca 274  Q
    | ||||||||  ||||| ||||||||||||||||||||||||    
T  33434 aattgtgacccgtttttcctaagaaaaactactatttataca 33475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 85; Significance: 5e-40; HSPs: 2)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 138 - 274
Target Start/End: Original strand, 19972 - 20108
Alignment:
Q  138 aatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttg 237  Q
    |||| |||||||| ||  ||||||||||||||||||||| |||| ||||| ||||||||||||||| ||||||| ||||||||||||||||||||| |||    
T  19972 aatgtaagttggtgcatctattcatacattgcaacttgtgactcatttgtagcttccatacggacaatattgagcgtaagtttttagtatgattgaattg 20071  T
Q  238 tgacctcttttttctaagaaaaactactatttataca 274  Q
    |||||  ||||| ||||||||||||||||||||||||    
T  20072 tgacccttttttcctaagaaaaactactatttataca 20108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 533 - 580
Target Start/End: Original strand, 20369 - 20416
Alignment:
Q  533 acaaatattggctaacaaattgccccccagaaacgttattttcgaact 580  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  20369 acaaatattggctaacaaattgccccctagaaacgttatgttcgaact 20416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 85; Significance: 5e-40; HSPs: 3)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 183 - 303
Target Start/End: Complemental strand, 29207 - 29088
Alignment:
Q  183 tttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatacagatagtcc 282  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |     
T  29207 tttgtcgcttccatacggacagtattgagtgtaagttttgagt-tgattgaattgtgacctctttttcctaagaaaaactactatttatacagatagaca 29109  T
Q  283 tataactacctaatcacatcc 303  Q
    |||||||||||| ||| ||||    
T  29108 tataactacctagtcatatcc 29088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 32271 - 32201
Alignment:
Q  116 tgtattgaatttgtaaagacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttg 186  Q
    ||||||||| ||||||||||||||||||| ||||||||||| ||||||| ||||||||||| |||||||||    
T  32271 tgtattgaaattgtaaagacttaatgaaatttggtacacatgttcatactttgcaacttgtgactcgtttg 32201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 492 - 580
Target Start/End: Complemental strand, 28922 - 28834
Alignment:
Q  492 tttacgtcaaacccttgactgcattaaatgctcatgttctcacaaatattggctaacaaattgccccccagaaacgttattttcgaact 580  Q
    |||| |||||||| ||||||| |||||||| |  | || |||||||||| ||||||||||||||||||||||||| |||| ||||||||    
T  28922 tttaggtcaaacctttgactgtattaaatgatactcttttcacaaatatcggctaacaaattgccccccagaaacattatgttcgaact 28834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 81; Significance: 1e-37; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 138 - 274
Target Start/End: Complemental strand, 11429 - 11293
Alignment:
Q  138 aatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttg 237  Q
    ||||||| ||||||||||  ||||||| ||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  11429 aatgaaatttggtacacaggttcatactttgcaacttgtgactcatttgtcgcttccatacggacagtattgagcgtaagtttttagtatgattgaattg 11330  T
Q  238 tgacctcttttttctaagaaaaactactatttataca 274  Q
    |||||   |||| ||||  ||||||||||||||||||    
T  11329 tgaccctgttttcctaaagaaaactactatttataca 11293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 80; Significance: 4e-37; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 133 - 279
Target Start/End: Original strand, 68105 - 68250
Alignment:
Q  133 gacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattg 232  Q
    |||| |||| ||||| ||||||| |||||||||||||||||||| |||||||| ||||||||||| ||| ||| ||||| ||||||||||||||||||||    
T  68105 gactgaatgtaagttagtacacagattcatacattgcaacttgtgactcgtttatcgcttccataaggatagt-ttgagcgtaagtttttagtatgattg 68203  T
Q  233 agttgtgacctctttttt-ctaagaaaaactactatttatacagatag 279  Q
    | |||||| ||||||||| |||||||||||||||||||||||| ||||    
T  68204 aattgtga-ctcttttttcctaagaaaaactactatttatacaaatag 68250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 149 - 279
Target Start/End: Original strand, 76226 - 76355
Alignment:
Q  149 gtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctctttt 248  Q
    ||||||| |||||||||||||||||||| |||||||| ||||||||||| ||| ||| ||||| ||||||||||||||||||||| |||||| |||||||    
T  76226 gtacacagattcatacattgcaacttgtgactcgtttatcgcttccataaggatagt-ttgagcgtaagtttttagtatgattgaattgtga-ctctttt 76323  T
Q  249 tt-ctaagaaaaactactatttatacagatag 279  Q
    || |||||||||||||||||||||||| ||||    
T  76324 ttcctaagaaaaactactatttatacaaatag 76355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 78; Significance: 7e-36; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 133 - 274
Target Start/End: Complemental strand, 129296 - 129156
Alignment:
Q  133 gacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattg 232  Q
    |||| |||| |||||| |||||| |||||||||||||||||||| |||||||| ||||||||||| ||| ||| ||||| |||| |||||||||||||||    
T  129296 gactgaatgtaagttgttacacagattcatacattgcaacttgtgactcgtttatcgcttccataaggatagt-ttgagcgtaaatttttagtatgattg 129198  T
Q  233 agttgtgacctcttttttctaagaaaaactactatttataca 274  Q
    | ||||||||  ||||| ||||||||||||||||||||||||    
T  129197 aattgtgacccttttttcctaagaaaaactactatttataca 129156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 138 - 279
Target Start/End: Complemental strand, 107547 - 107406
Alignment:
Q  138 aatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttg 237  Q
    |||| ||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| ||| |||  |||| ||||||||||||||||||||| |||    
T  107547 aatgtaagttggtacacagattcatacattgcaacttgtgactcgtttatcgcttccataaggatagt-ctgagcgtaagtttttagtatgattgaattg 107449  T
Q  238 tgacctcttttttctaag-aaaaactactatttatacagatag 279  Q
    |||||| ||||| ||||| ||||| ||||||||||||| ||||    
T  107448 tgacctttttttcctaagaaaaaaatactatttatacaaatag 107406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 69; Significance: 2e-30; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 143 - 279
Target Start/End: Complemental strand, 200245 - 200111
Alignment:
Q  143 aagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacc 242  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| ||||||||||| ||| | | |||||||||||||||| |||||||||| ||||||||    
T  200245 aagttggtacacagattcatacattgcaacttgtgactcatttctcgcttccataaggataat-ttgagtgtaagttttt-gtatgattgaattgtgacc 200148  T
Q  243 tcttttttctaagaaaaactactatttatacagatag 279  Q
      ||||| ||||||||||| |||||||||||| ||||    
T  200147 cttttttcctaagaaaaacaactatttatacaaatag 200111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 9 - 129
Target Start/End: Original strand, 127625 - 127743
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaaagtgttt 108  Q
    ||||||||||| || |||||||| ||||||||| ||| |||||  ||  || ||||| ||||||||||| |||||  |||||||||||||||| ||||||    
T  127625 aatccgtgttgaatccaatcgaaattctgtaaagaatgacaatagaagaaaatacttcgaaaagacttaataaaa--agacttaaattgcaaacgtgttt 127722  T
Q  109 aaaagattgtattgaatttgt 129  Q
    |||  | ||||||||||||||    
T  127723 aaagaactgtattgaatttgt 127743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 120787 - 120877
Alignment:
Q  9 aatccgtgttggattcaatcgaagttctgtaaataataacaatgaaaagaagtactttgaaaagacttagtaaaataagacttaaattgcaaa 101  Q
    ||||||||||| || |||||||| ||||||||| ||| |||||  ||  || ||||| ||||||||||| ||||  |||||||||||||||||    
T  120787 aatccgtgttgaatccaatcgaaattctgtaaagaatgacaatagaagaaaatacttcgaaaagacttaataaa--aagacttaaattgcaaa 120877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 63; Significance: 6e-27; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 146 - 279
Target Start/End: Original strand, 1415 - 1547
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||| ||||||||||||||||||| |||||||| || ||||||| |||| | | |||||||||||||||| |||||||||| |||||||| ||    
T  1415 ttggtacacatgttcatacattgcaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgacttgtgacc-ct 1512  T
Q  246 tttttc-taagaaaaactactatttatacagatag 279  Q
    |||| | || |||||||||||||||||||| ||||    
T  1513 ttttccttaggaaaaactactatttatacaaatag 1547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 60; Significance: 4e-25; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 146 - 272
Target Start/End: Complemental strand, 12446 - 12321
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||| ||||||||||||||||||| ||| |||| || ||||||| |||| | | |||||||||||||||| |||||||||| ||||||||||     
T  12446 ttggtacacatgttcatacattgcaacttgtgacttgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgattgatttgtgacctc- 12349  T
Q  246 tttttctaa-gaaaaactactatttata 272  Q
    |||| |||| ||||||||||||||||||    
T  12348 ttttcctaaggaaaaactactatttata 12321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 146 - 274
Target Start/End: Original strand, 250092 - 250219
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    |||||||||| |||||||||||||||||||| |||||||| ||||||||||| ||| | | |||||||||||||||  |||||||||  |||||||| ||    
T  250092 ttggtacacaaattcatacattgcaacttgtgactcgtttctcgcttccatatggataat-ttgagtgtaagttttgtgtatgattggattgtgaccact 250190  T
Q  246 tttttctaagaaaaactactatttataca 274  Q
    |||   |  ||||||||||||||||||||    
T  250191 tttccttgggaaaaactactatttataca 250219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0770 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold0770
Description:

Target: scaffold0770; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 146 - 279
Target Start/End: Original strand, 3711 - 3842
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||||||||||||||||||||| | |||||||| || ||||||| |||| | | |||||||||||||||| |||||||||| |||||||| ||    
T  3711 ttggtacacatattcatacattgcaacttttgactcgtttctctcttccatgcggataat-ttgagtgtaagttttt-gtatgattgaattgtgacc-ct 3807  T
Q  246 tttttc-taagaaaaactactatttatacagatag 279  Q
    |||| | ||||| |||||| |||||||||| ||||    
T  3808 ttttacttaagagaaactaatatttatacaaatag 3842  T

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Target: scaffold0100 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 146 - 279
Target Start/End: Complemental strand, 9105 - 8974
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||||||||||||||||||||||| ||| |||| || ||||||| |||| | | |||| ||||||||||| |||||||||| |||||| ||||    
T  9105 ttggtacacatattcatacattgcaacttgtgacttgtttctctcttccatgcggataat-ttgaatgtaagttttt-gtatgattgaattgtga-ctct 9009  T
Q  246 tttttc-taagaaaaactactatttatacagatag 279  Q
    |||| | ||||| ||||||||||||||||| ||||    
T  9008 ttttccttaagagaaactactatttatacaaatag 8974  T

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Target: scaffold0029 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 146 - 279
Target Start/End: Original strand, 102015 - 102146
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||||||||||||||||||||| | |||||||| || ||||||| |||| | | |||||||||||||||| |||||||||| |||||||| ||    
T  102015 ttggtacacatattcatacattgcaacttttgactcgtttctctcttccatgcggataat-ttgagtgtaagttttt-gtatgattgaattgtgacc-ct 102111  T
Q  246 tttttc-taagaaaaactactatttatacagatag 279  Q
    |||| | ||||| |||||| |||||||||| ||||    
T  102112 ttttccttaagagaaactattatttatacaaatag 102146  T

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Target: scaffold0151 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 146 - 274
Target Start/End: Original strand, 14155 - 14281
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||| ||||||||||||||||||| |||||||| || ||||||| |||| | | |||||||||||||||| |||||||||| |||||||| ||    
T  14155 ttggtacacatgttcatacattgcaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttt-gtatgattgaattgtgacc-ct 14251  T
Q  246 tttttc-taagaaaaactactatttataca 274  Q
    |||| | || | ||||||||||||||||||    
T  14252 ttttccttagggaaaactactatttataca 14281  T

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Target: scaffold1701 (Bit Score: 51; Significance: 9e-20; HSPs: 1)
Name: scaffold1701
Description:

Target: scaffold1701; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 774 - 836
Target Start/End: Complemental strand, 1457 - 1395
Alignment:
Q  774 cagtatcaaaagctatgtatggccctgagtcatacttttactcttacttcatttctctttagt 836  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||    
T  1457 cagtatcaaaagctatatatgaccctgagtcatacttttactcttacttcgtttctctttagt 1395  T

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Target: scaffold0063 (Bit Score: 51; Significance: 9e-20; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 133 - 279
Target Start/End: Complemental strand, 70773 - 70628
Alignment:
Q  133 gacttaatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattg 232  Q
    |||| |||| || |||||| |||| ||||||||||||||||||| |||||||| || ||||||| |||| | | |||||||||||| ||| |||||||||    
T  70773 gactgaatgtaaattggtaaacatgttcatacattgcaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagtattttgtatgattg 70675  T
Q  233 agttgtgacctcttttttctaagaaaaactactatttatacagatag 279  Q
    | |||||| |  ||||  ||| | |||||||||||||||||| ||||    
T  70674 aattgtgatccgttttccctatggaaaactactatttatacaaatag 70628  T

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Target: scaffold0190 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 138 - 251
Target Start/End: Complemental strand, 7552 - 7441
Alignment:
Q  138 aatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttg 237  Q
    |||| |||||| ||||||| ||||||||||||||||||| |||||||| || ||||||| |||| | | ||||||||| |||||| |||||||||| |||    
T  7552 aatgtaagttgatacacatgttcatacattgcaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtatgttttttgtatgattgaattg 7454  T
Q  238 tgacctcttttttc 251  Q
    ||| ||||||||||    
T  7453 tga-ctcttttttc 7441  T

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Target: scaffold0480 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 279
Target Start/End: Complemental strand, 3811 - 3685
Alignment:
Q  152 cacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctcttttttc 251  Q
    ||||| |||||||||| |||||||| |||||||| || ||||||| |||| | | |||||||||||||||| ||||||| || ||||||||  ||||  |    
T  3811 cacatgttcatacatttcaacttgtgactcgtttctctcttccatgcggataat-ttgagtgtaagttttttgtatgatagaattgtgacccattttccc 3713  T
Q  252 taagaaaaactactatttatacagatag 279  Q
    || | |||||||||| ||||||| ||||    
T  3712 tagggaaaactactacttatacaaatag 3685  T

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Target: scaffold0504 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 693 - 759
Alignment:
Q  207 ttgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatac 273  Q
    |||||||||||||||| |||||| ||| ||||||||| ||||  ||| |||||||||||||||||||    
T  693 ttgagtgtaagttttttgtatgactgaattgtgacctgttttccctatgaaaaactactatttatac 759  T

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Target: scaffold0096 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 36454 - 36396
Alignment:
Q  138 aatgaaagttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccat 196  Q
    |||| |||||||||||||| ||||||||||||||||||| |||||||| || |||||||    
T  36454 aatgtaagttggtacacatgttcatacattgcaacttgtgactcgtttctctcttccat 36396  T

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Target: scaffold0297 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 273
Target Start/End: Original strand, 8791 - 8917
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacctct 245  Q
    ||||||||||| ||||||||||| ||||||| |||||||| || |||  ||  ||| ||| |||||||||||||||  |||||||||  ||||||||  |    
T  8791 ttggtacacatgttcatacattgtaacttgtgactcgtttctctcttgaatgtggatagt-ttgagtgtaagttttgtgtatgattggattgtgacccgt 8889  T
Q  246 tttttctaagaaaaactactatttatac 273  Q
    |||   || | |||||||||||||||||    
T  8890 tttccttatggaaaactactatttatac 8917  T

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Target: scaffold0035 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 210 - 273
Target Start/End: Original strand, 25825 - 25888
Alignment:
Q  210 agtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatac 273  Q
    ||||||||||||  |||||||||| ||||||||  ||||| ||| |||||||||||||||||||    
T  25825 agtgtaagttttctgtatgattgaattgtgacccgtttttcctatgaaaaactactatttatac 25888  T

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Target: scaffold1496 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1496
Description:

Target: scaffold1496; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 207 - 273
Target Start/End: Complemental strand, 1462 - 1396
Alignment:
Q  207 ttgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttatac 273  Q
    |||||||||||||||  |||||||||| ||||||||  |||||  || |||||||||||||||||||    
T  1462 ttgagtgtaagttttccgtatgattgaattgtgacccgtttttcttatgaaaaactactatttatac 1396  T

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Target: scaffold0417 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 232
Target Start/End: Complemental strand, 1421 - 1336
Alignment:
Q  146 ttggtacacatattcatacattgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattg 232  Q
    |||||||||||  |||||||||||||||||| |||||||| || ||||||| || | | | |||||||||||||||  |||||||||    
T  1421 ttggtacacatgatcatacattgcaacttgtgactcgtttctctcttccatgcgaataat-ttgagtgtaagttttgtgtatgattg 1336  T

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Target: scaffold0126 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 31293 - 31360
Alignment:
Q  207 ttgagtgtaagtttttagtatgattgagttgtgacctcttttttctaagaaaaactactatttataca 274  Q
    |||||||| ||||||  ||||||||||  | |||| | ||||| ||||||||||||||||||||||||    
T  31293 ttgagtgttagttttctgtatgattgaactctgacatgtttttcctaagaaaaactactatttataca 31360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 140
Target Start/End: Complemental strand, 11703 - 11669
Alignment:
Q  106 tttaaaagattgtattgaatttgtaaagacttaat 140  Q
    ||||||||| |||||||||||||||||||||||||    
T  11703 tttaaaagactgtattgaatttgtaaagacttaat 11669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 535 - 580
Target Start/End: Complemental strand, 7147 - 7102
Alignment:
Q  535 aaatattggctaacaaattgccccccagaaacgttattttcgaact 580  Q
    ||||||||||||||||||||||||| ||||| || || ||||||||    
T  7147 aaatattggctaacaaattgcccccaagaaatgtcatattcgaact 7102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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