View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2995_low_9 (Length: 325)

Name: NF2995_low_9
Description: NF2995
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2995_low_9
NF2995_low_9
[»] chr5 (11 HSPs)
chr5 (10-261)||(22750998-22751249)
chr5 (58-241)||(38144532-38144714)
chr5 (66-241)||(28370058-28370232)
chr5 (66-241)||(19512263-19512438)
chr5 (53-176)||(23528573-23528695)
chr5 (66-127)||(18407947-18408008)
chr5 (66-127)||(23111203-23111264)
chr5 (66-118)||(22438751-22438803)
chr5 (66-117)||(19236900-19236951)
chr5 (66-115)||(22461158-22461207)
chr5 (66-115)||(22467782-22467831)
[»] chr7 (24 HSPs)
chr7 (10-261)||(18873217-18873468)
chr7 (66-261)||(15168032-15168227)
chr7 (67-261)||(10895795-10895989)
chr7 (59-261)||(14422841-14423043)
chr7 (58-258)||(12709839-12710038)
chr7 (58-258)||(13122910-13123109)
chr7 (58-261)||(13743566-13743768)
chr7 (66-241)||(16009454-16009628)
chr7 (58-254)||(12590639-12590832)
chr7 (58-176)||(13007374-13007491)
chr7 (66-231)||(16677180-16677347)
chr7 (66-231)||(17651416-17651583)
chr7 (66-118)||(11382874-11382926)
chr7 (66-118)||(11389351-11389403)
chr7 (66-118)||(20311055-20311107)
chr7 (66-118)||(21230963-21231015)
chr7 (66-126)||(13679485-13679545)
chr7 (66-117)||(2971254-2971305)
chr7 (66-117)||(11311059-11311110)
chr7 (66-117)||(20906465-20906516)
chr7 (68-119)||(46625961-46626012)
chr7 (58-98)||(831629-831669)
chr7 (58-98)||(1196809-1196849)
chr7 (58-98)||(34958578-34958618)
[»] scaffold0029 (1 HSPs)
scaffold0029 (58-261)||(111738-111942)
[»] scaffold0026 (2 HSPs)
scaffold0026 (58-261)||(11846-12049)
scaffold0026 (66-241)||(111563-111737)
[»] chr3 (22 HSPs)
chr3 (66-261)||(14762761-14762956)
chr3 (66-261)||(20247792-20247987)
chr3 (66-261)||(38310803-38310998)
chr3 (66-256)||(24192817-24193008)
chr3 (66-241)||(9534205-9534379)
chr3 (66-241)||(23370509-23370684)
chr3 (66-176)||(24933832-24933941)
chr3 (58-144)||(41455093-41455178)
chr3 (58-202)||(16801463-16801606)
chr3 (66-241)||(55499105-55499281)
chr3 (66-124)||(18929239-18929297)
chr3 (66-127)||(17240516-17240577)
chr3 (66-117)||(13302244-13302295)
chr3 (66-117)||(13323791-13323842)
chr3 (66-117)||(12033448-12033499)
chr3 (66-117)||(13312900-13312951)
chr3 (66-117)||(17131732-17131783)
chr3 (66-117)||(51301589-51301640)
chr3 (66-176)||(10389447-10389557)
chr3 (66-176)||(10414536-10414646)
chr3 (66-176)||(10421206-10421316)
chr3 (66-119)||(16801027-16801080)
[»] chr6 (24 HSPs)
chr6 (66-261)||(23057795-23057990)
chr6 (58-261)||(29614142-29614345)
chr6 (58-259)||(18800296-18800497)
chr6 (66-241)||(23839075-23839250)
chr6 (66-261)||(4477714-4477909)
chr6 (66-241)||(10986184-10986359)
chr6 (58-195)||(930091-930227)
chr6 (58-176)||(12168305-12168422)
chr6 (58-176)||(19287214-19287331)
chr6 (58-176)||(19785865-19785982)
chr6 (58-176)||(19878398-19878515)
chr6 (58-176)||(19884174-19884291)
chr6 (66-145)||(34639990-34640069)
chr6 (66-261)||(21565215-21565410)
chr6 (66-145)||(34646664-34646743)
chr6 (66-176)||(25469708-25469816)
chr6 (70-118)||(24512851-24512899)
chr6 (66-115)||(9187498-9187547)
chr6 (66-119)||(25348486-25348539)
chr6 (66-119)||(25598643-25598696)
chr6 (66-119)||(25397172-25397225)
chr6 (66-119)||(2286770-2286823)
chr6 (66-119)||(19471338-19471391)
chr6 (66-127)||(31252413-31252474)
[»] scaffold1773 (1 HSPs)
scaffold1773 (58-261)||(1036-1237)
[»] scaffold0006 (1 HSPs)
scaffold0006 (58-261)||(50037-50238)
[»] chr4 (12 HSPs)
chr4 (58-261)||(8045828-8046030)
chr4 (58-261)||(11847964-11848173)
chr4 (66-176)||(53483646-53483756)
chr4 (66-118)||(15408139-15408191)
chr4 (66-119)||(8834895-8834948)
chr4 (66-119)||(13888641-13888694)
chr4 (66-117)||(14486661-14486712)
chr4 (68-119)||(22724691-22724742)
chr4 (66-119)||(15245215-15245268)
chr4 (68-119)||(15308120-15308171)
chr4 (68-117)||(27906266-27906315)
chr4 (58-98)||(15747552-15747592)
[»] scaffold0025 (1 HSPs)
scaffold0025 (66-261)||(14399-14595)
[»] scaffold0924 (1 HSPs)
scaffold0924 (58-261)||(746-949)
[»] scaffold0247 (1 HSPs)
scaffold0247 (58-240)||(11219-11401)
[»] chr8 (14 HSPs)
chr8 (66-241)||(44477500-44477674)
chr8 (66-241)||(44492658-44492832)
chr8 (58-242)||(23866490-23866674)
chr8 (66-241)||(8727736-8727911)
chr8 (66-176)||(17054533-17054642)
chr8 (9-119)||(18614271-18614381)
chr8 (66-127)||(23482056-23482117)
chr8 (154-241)||(27940946-27941032)
chr8 (66-119)||(39364919-39364972)
chr8 (66-117)||(29643389-29643440)
chr8 (66-118)||(14056567-14056619)
chr8 (66-118)||(25111976-25112028)
chr8 (66-117)||(24320674-24320725)
chr8 (66-119)||(21931696-21931749)
[»] chr2 (15 HSPs)
chr2 (66-241)||(6483595-6483769)
chr2 (66-241)||(6487062-6487236)
chr2 (66-261)||(19661457-19661651)
chr2 (58-231)||(26583715-26583886)
chr2 (66-241)||(23878885-23879059)
chr2 (66-261)||(23089058-23089253)
chr2 (66-241)||(23101466-23101641)
chr2 (66-176)||(5706027-5706137)
chr2 (66-127)||(23265133-23265194)
chr2 (66-127)||(23280201-23280262)
chr2 (66-124)||(21908353-21908411)
chr2 (66-119)||(24661576-24661629)
chr2 (66-117)||(10577-10628)
chr2 (66-117)||(25180933-25180984)
chr2 (66-166)||(26885133-26885233)
[»] scaffold0117 (2 HSPs)
scaffold0117 (58-261)||(1893-2095)
scaffold0117 (58-261)||(8570-8772)
[»] chr1 (12 HSPs)
chr1 (66-241)||(20437027-20437202)
chr1 (58-176)||(41111977-41112094)
chr1 (9-127)||(32651563-32651681)
chr1 (66-127)||(18712790-18712851)
chr1 (66-118)||(19663520-19663572)
chr1 (66-119)||(10811786-10811839)
chr1 (66-119)||(20805320-20805373)
chr1 (66-118)||(11158093-11158145)
chr1 (66-117)||(20851136-20851187)
chr1 (66-117)||(20857763-20857814)
chr1 (66-117)||(21706276-21706327)
chr1 (66-117)||(21710818-21710869)
[»] scaffold0058 (1 HSPs)
scaffold0058 (58-261)||(149-350)
[»] scaffold0553 (1 HSPs)
scaffold0553 (66-241)||(10199-10374)
[»] scaffold0544 (1 HSPs)
scaffold0544 (66-241)||(1529-1704)
[»] scaffold0090 (1 HSPs)
scaffold0090 (58-260)||(18026-18229)
[»] scaffold0456 (4 HSPs)
scaffold0456 (10-145)||(904-1039)
scaffold0456 (10-145)||(8049-8184)
scaffold0456 (208-261)||(846-899)
scaffold0456 (208-261)||(7991-8044)
[»] scaffold0154 (1 HSPs)
scaffold0154 (58-202)||(30772-30917)
[»] scaffold0796 (2 HSPs)
scaffold0796 (58-176)||(1728-1845)
scaffold0796 (58-176)||(5751-5868)
[»] scaffold0476 (1 HSPs)
scaffold0476 (66-259)||(3296-3490)
[»] scaffold0077 (1 HSPs)
scaffold0077 (66-241)||(3625-3800)
[»] scaffold0004 (1 HSPs)
scaffold0004 (16-127)||(116887-116998)
[»] scaffold0129 (1 HSPs)
scaffold0129 (66-174)||(45278-45386)
[»] scaffold0222 (1 HSPs)
scaffold0222 (66-127)||(16811-16872)
[»] scaffold0461 (1 HSPs)
scaffold0461 (66-127)||(11-72)
[»] scaffold0146 (1 HSPs)
scaffold0146 (66-127)||(13623-13684)
[»] scaffold0020 (1 HSPs)
scaffold0020 (66-127)||(101931-101992)
[»] scaffold0310 (1 HSPs)
scaffold0310 (66-118)||(17643-17695)
[»] scaffold0107 (1 HSPs)
scaffold0107 (66-118)||(40535-40587)
[»] scaffold0019 (1 HSPs)
scaffold0019 (66-118)||(135473-135525)
[»] scaffold0235 (1 HSPs)
scaffold0235 (66-116)||(22596-22646)
[»] scaffold0124 (1 HSPs)
scaffold0124 (66-118)||(34279-34331)
[»] scaffold0138 (1 HSPs)
scaffold0138 (66-119)||(12296-12349)
[»] scaffold0317 (1 HSPs)
scaffold0317 (66-126)||(1378-1438)
[»] scaffold0139 (1 HSPs)
scaffold0139 (66-118)||(15000-15052)
[»] scaffold0634 (1 HSPs)
scaffold0634 (222-261)||(3519-3558)
[»] scaffold0096 (1 HSPs)
scaffold0096 (66-119)||(39510-39563)
[»] scaffold0815 (1 HSPs)
scaffold0815 (66-114)||(1453-1501)
[»] scaffold1318 (1 HSPs)
scaffold1318 (66-117)||(1916-1967)
[»] scaffold0348 (1 HSPs)
scaffold0348 (66-117)||(9336-9387)
[»] scaffold0127 (1 HSPs)
scaffold0127 (66-117)||(10239-10290)
[»] scaffold0023 (1 HSPs)
scaffold0023 (66-117)||(135438-135489)
[»] scaffold0001 (1 HSPs)
scaffold0001 (66-117)||(493032-493082)
[»] scaffold2054 (1 HSPs)
scaffold2054 (58-151)||(680-774)
[»] scaffold0609 (1 HSPs)
scaffold0609 (66-127)||(5861-5922)
[»] scaffold0335 (1 HSPs)
scaffold0335 (66-119)||(2631-2684)


Alignment Details
Target: chr5 (Bit Score: 208; Significance: 1e-114; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 10 - 261
Target Start/End: Complemental strand, 22751249 - 22750998
Alignment:
Q  10 gagatgaacaagtatagtcagagaatctggtcgttgtgcgtttcttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttc 109  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  22751249 gagaagaacaagtatagtcagagaatccggtcgttgtgcgtttcttctaaaactaaggtaagggtgagactttctctcgataatcataatctataatttc 22751150  T
Q  110 tgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattccctt 209  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| |||    
T  22751149 tgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctctt 22751050  T
Q  210 gtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22751049 gtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 22750998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 58 - 241
Target Start/End: Original strand, 38144532 - 38144714
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  38144532 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttag 38144631  T
Q  158 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 241  Q
    ||||| ||||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  38144632 ggtttgatgatgattctgaggggaa-tgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 38144714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 66 - 241
Target Start/End: Original strand, 28370058 - 28370232
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  28370058 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 28370157  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 241  Q
    ||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| ||||||||||||||||||    
T  28370158 gatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatct 28370232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 66 - 241
Target Start/End: Complemental strand, 19512438 - 19512263
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |    
T  19512438 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 19512339  T
Q  165 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 241  Q
    |||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| ||||||||||||||||||    
T  19512338 tgatgattttgaggggaa-tgggtattgatcatgttaattctattgtaacgtaatgtttagaatgaaaacttaatct 19512263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 53 - 176
Target Start/End: Complemental strand, 23528695 - 23528573
Alignment:
Q  53 cttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagg 152  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||      
T  23528695 cttctaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaa 23528597  T
Q  153 gttagggtttaatgatgattctga 176  Q
    |||||||||| |||||||||||||    
T  23528596 gttagggtttgatgatgattctga 23528573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 18407947 - 18408008
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 127  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  18407947 ggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattg 18408008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 23111203 - 23111264
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 127  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23111203 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23111264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 22438751 - 22438803
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22438751 ggtaagggtgagactatctctcaataatcataatgtataatttctgaaaattg 22438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 19236951 - 19236900
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  19236951 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 19236900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 22461207 - 22461158
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 115  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||    
T  22461207 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22461158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 22467831 - 22467782
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 115  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||    
T  22467831 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22467782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 10 - 261
Target Start/End: Complemental strand, 18873468 - 18873217
Alignment:
Q  10 gagatgaacaagtatagtcagagaatctggtcgttgtgcgtttcttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttc 109  Q
    |||| |||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  18873468 gagaagaacaagtatagtcagagaatccggccgttgtgcgtttcttctaaaactaaggtaagggtgagactttctctcgataatcataatctataatttc 18873369  T
Q  110 tgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattccctt 209  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| |||    
T  18873368 tgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctctt 18873269  T
Q  210 gtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18873268 gtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 18873217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 66 - 261
Target Start/End: Complemental strand, 15168227 - 15168032
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  15168227 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgat 15168128  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 261  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168127 gatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 15168032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 67 - 261
Target Start/End: Original strand, 10895795 - 10895989
Alignment:
Q  67 gtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtttt-ggaaaataaattgagggttagggtttaat 165  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||| |||||||| |||||||||||| ||    
T  10895795 gtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttgat 10895894  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 261  Q
    ||||||||||| |||||| ||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10895895 gatgattctgaggggaat-gggtattgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 10895989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 59 - 261
Target Start/End: Complemental strand, 14423043 - 14422841
Alignment:
Q  59 aaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttag 157  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  14423043 aaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttag 14422944  T
Q  158 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 257  Q
    ||||| ||||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| |||||||||||||||||| | ||| || ||||||    
T  14422943 ggtttgatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgat 14422845  T
Q  258 cata 261  Q
    ||||    
T  14422844 cata 14422841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 58 - 258
Target Start/End: Original strand, 12709839 - 12710038
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  12709839 aaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 12709937  T
Q  158 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 256  Q
    ||||| ||||||||| ||||| ||| |||||||||||| |||||||||   |||||||||||||||||||||  |||||||||| |||||| ||||||||    
T  12709938 ggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatc-ttgttgttgctgtga 12710036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 58 - 258
Target Start/End: Original strand, 13122910 - 13123109
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  13122910 aaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 13123008  T
Q  158 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 256  Q
    ||||| ||||||||| ||||| ||| |||||||||||| |||||||||   |||||||||||||||||||||  |||||||||| |||||| ||||||||    
T  13123009 ggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatc-ttgttgttgctgtga 13123107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 58 - 261
Target Start/End: Complemental strand, 13743768 - 13743566
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  13743768 aaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 13743670  T
Q  158 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 257  Q
    ||||| ||||||||| ||||| ||| |||||||||||| ||||||||  |||||| |||  |||||||| |||| ||||||||| ||||  |||||||||    
T  13743669 ggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattttcttgtattatgctgttcagattgaagacttaatctatgttattgctgtgat 13743570  T
Q  258 cata 261  Q
    ||||    
T  13743569 cata 13743566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 66 - 241
Target Start/End: Complemental strand, 16009628 - 16009454
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||| |||||| ||||| ||    
T  16009628 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatggttttggaagataaattgtgggttaaggtttgat 16009529  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 241  Q
    ||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  16009528 gatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatct 16009454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 58 - 254
Target Start/End: Original strand, 12590639 - 12590832
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  12590639 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaagttag 12590737  T
Q  158 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgt 254  Q
    ||||| ||||||||||||| ||  | || |||| |||  ||||| ||  |||| ||| ||||||| ||||||||| |||||||  ||||| ||||||    
T  12590738 ggtttgatgatgattctgatgg--aatgagtaaagatgatgttagttttcttggaatttaatgttaagaatgaaagcttaatccatgttgttgctgt 12590832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 58 - 176
Target Start/End: Complemental strand, 13007491 - 13007374
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  13007491 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 13007393  T
Q  158 ggtttaatgatgattctga 176  Q
    ||||| |||||||||||||    
T  13007392 ggtttgatgatgattctga 13007374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 16677347 - 16677180
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaat-aaattgagggttagggttta 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| || ||||| |||||||||||||     
T  16677347 ggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggtttg 16677248  T
Q  164 atgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaa 231  Q
    ||||||||| ||| | | || | ||||||||| |||||| |   ||||||  | ||||||||||||||    
T  16677247 atgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaa 16677180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 17651583 - 17651416
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaat-aaattgagggttagggttta 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| || ||||| |||||||||||||     
T  17651583 ggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggtttg 17651484  T
Q  164 atgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaa 231  Q
    ||||||||| ||| | | || | ||||||||| |||||| |   ||||||  | ||||||||||||||    
T  17651483 atgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaa 17651416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 11382874 - 11382926
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11382874 ggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 11389351 - 11389403
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11389351 ggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11389403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 20311055 - 20311107
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  20311055 ggtaagggtgagactatctctcaataatcataacgtataatttctgaaaattg 20311107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 21230963 - 21231015
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  21230963 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 21231015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 13679545 - 13679485
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaatt 126  Q
    ||||||||||||||||||| ||||| ||||| || |||||||| |||||||||| ||||||    
T  13679545 ggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaatt 13679485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 2971305 - 2971254
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  2971305 ggtaagggtgggattatctttcaatagtcataatttataatttctgaaaatt 2971254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 11311110 - 11311059
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||||||||||||||||||||||| ||| | || ||||||| ||||||    
T  11311110 ggtaagggtgagactatctctcaataataatagtgtagaatttctaaaaatt 11311059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 20906465 - 20906516
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20906465 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20906516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 46626012 - 46625961
Alignment:
Q  68 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||||| |||||||| || ||||| ||||||||| |||||||||    
T  46626012 taagggtgagactaactctcaatgattataatatataatttcggaaaattga 46625961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 831629 - 831669
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataa 98  Q
    ||||||| |||||||||||||||| ||||||||||| ||||    
T  831629 aaaactaaggtaagggtgagactaactctcaataattataa 831669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 1196809 - 1196849
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataa 98  Q
    ||||||| |||||||||||||||| ||||||||||| ||||    
T  1196809 aaaactaaggtaagggtgagactaactctcaataattataa 1196849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 34958618 - 34958578
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataa 98  Q
    ||||||| |||||||||||||||| ||||||||||| ||||    
T  34958618 aaaactaaggtaagggtgagactaactctcaataattataa 34958578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 58 - 261
Target Start/End: Complemental strand, 111942 - 111738
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaa-ttgacctaattgcttagttttggaaaataaattgagggtta 156  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||    
T  111942 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaaattgacctaattgcatagttttggaagataaattgagggtta 111843  T
Q  157 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 256  Q
    |||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  111842 gggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 111743  T
Q  257 tcata 261  Q
    |||||    
T  111742 tcata 111738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 168; Significance: 5e-90; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 58 - 261
Target Start/End: Original strand, 11846 - 12049
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  11846 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagagttag 11945  T
Q  158 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 257  Q
    ||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  11946 ggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatcttcagaatgaaaacttaatctttgttgttgctgtgat 12045  T
Q  258 cata 261  Q
    ||||    
T  12046 cata 12049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 66 - 241
Target Start/End: Complemental strand, 111737 - 111563
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  111737 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 111638  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 241  Q
    ||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  111637 gatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatct 111563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 168; Significance: 5e-90; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 66 - 261
Target Start/End: Original strand, 14762761 - 14762956
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  14762761 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgat 14762860  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 261  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762861 gatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 14762956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 66 - 261
Target Start/End: Original strand, 20247792 - 20247987
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  20247792 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgat 20247891  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 261  Q
    ||||||||||||||||| |||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247892 gatgattctgaagggaaatgggtaatgatcatgttaattttcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 20247987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 66 - 261
Target Start/End: Original strand, 38310803 - 38310998
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  38310803 ggtaagggtgagactatctctcgataatcataatctataatttctgaatattgacctaattgcatagttttggaagataaattgagggttagggtttgat 38310902  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 261  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38310903 gatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 38310998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 66 - 256
Target Start/End: Complemental strand, 24193008 - 24192817
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtttt-ggaaaataaattgagggttagggtttaa 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||| |    
T  24193008 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 24192909  T
Q  165 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 256  Q
    |||||||||||||||||| |||||||||||| |||||||||  ||||||| | |||||||||||||||||||||||| || || ||||||||    
T  24192908 tgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttcagaatgaaaacttaatctatgctgttgctgtga 24192817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 66 - 241
Target Start/End: Complemental strand, 9534379 - 9534205
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  9534379 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 9534280  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 241  Q
    |||||||||||  |||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  9534279 gatgattctgagtggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatct 9534205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 66 - 241
Target Start/End: Original strand, 23370509 - 23370684
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 164  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||| |    
T  23370509 ggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttga 23370608  T
Q  165 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 241  Q
    |||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  23370609 tgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatct 23370684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 66 - 176
Target Start/End: Original strand, 24933832 - 24933941
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||   ||||||||| ||    
T  24933832 ggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggtttgat 24933930  T
Q  166 gatgattctga 176  Q
    |||||||||||    
T  24933931 gatgattctga 24933941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 41455093 - 41455178
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaata 144  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  41455093 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaata 41455178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 58 - 202
Target Start/End: Original strand, 16801463 - 16801606
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaat-aaattgagggtta 156  Q
    ||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||| ||| ||| || ||||||| |||||    
T  16801463 aaaactaaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaattgacctgattgcttagcttttgaagataaaattgaaggtta 16801561  T
Q  157 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaa 202  Q
    ||| || ||||||||| ||| | |||| | ||||||||| ||||||    
T  16801562 ggg-ttgatgatgattttgaggagaatggtgtaatgatcatgttaa 16801606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 241
Target Start/End: Original strand, 55499105 - 55499281
Alignment:
Q  66 ggtaagggtgagactatctctcaataatc-ataatctataatttctg-aaaattgacctaattgcttagttttggaaaataaattgagggttagggttta 163  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| | ||||||||||||| ||||||   |||   |  |||||||||||||||||||     
T  55499105 ggtaagggtgagactatctctcattaatagataatatgtaatttcgggaaaattgacctaactgcttaaccttgaggataaaattgagggttagggtttg 55499204  T
Q  164 atgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 241  Q
    ||||||||||||| ||||| |||||||||||| ||||||||   ||||||| | |||||| |||||||| ||||||||    
T  55499205 atgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatct 55499281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 66 - 124
Target Start/End: Complemental strand, 18929297 - 18929239
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaa 124  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  18929297 ggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 18929239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 17240516 - 17240577
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 127  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  17240516 ggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 17240577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 13302244 - 13302295
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    ||||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  13302244 ggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13302295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 13323791 - 13323842
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    ||||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  13323791 ggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13323842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 12033448 - 12033499
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  12033448 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 12033499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 13312900 - 13312951
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    ||||||||||||| ||||| |||||||||||||| | |||||| ||||||||    
T  13312900 ggtaagggtgagattatctttcaataatcataatatgtaatttttgaaaatt 13312951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 17131783 - 17131732
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  17131783 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 17131732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 51301640 - 51301589
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    ||||||||||||| |||||  ||||||||||||| | |||||||||||||||    
T  51301640 ggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 51301589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 176
Target Start/End: Original strand, 10389447 - 10389557
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    |||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | |||||||  |||||||  | |||||  |||   ||||||||| ||    
T  10389447 ggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtttgat 10389546  T
Q  166 gatgattctga 176  Q
    |||||||||||    
T  10389547 gatgattctga 10389557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 176
Target Start/End: Original strand, 10414536 - 10414646
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    |||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | |||||||  |||||||  | |||||  |||   ||||||||| ||    
T  10414536 ggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtttgat 10414635  T
Q  166 gatgattctga 176  Q
    |||||||||||    
T  10414636 gatgattctga 10414646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 176
Target Start/End: Original strand, 10421206 - 10421316
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    |||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | |||||||  |||||||  | |||||  |||   ||||||||| ||    
T  10421206 ggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtttgat 10421305  T
Q  166 gatgattctga 176  Q
    |||||||||||    
T  10421306 gatgattctga 10421316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 16801080 - 16801027
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  16801080 ggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 16801027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 164; Significance: 1e-87; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 66 - 261
Target Start/End: Complemental strand, 23057990 - 23057795
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  23057990 ggtaagggtgagactatctctcgataatcataatctataattcctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgat 23057891  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 261  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23057890 gatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 23057795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 58 - 261
Target Start/End: Original strand, 29614142 - 29614345
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttgg-aaaataaattgagggtta 156  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||| ||||||||||||||||||    
T  29614142 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctagttgcataattttggaaaaataaattgagggtta 29614241  T
Q  157 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 256  Q
    |||||| ||||||||| ||||||||| |||||||||||| ||||||||| ||||| ||  |||||| |||||||||||||||||||||||| ||||||||    
T  29614242 gggtttgatgatgattatgaagggaaatgggtaatgatcatgttaattctcttgt-attgaatgtttagaatgaaaacttaatctttgttgttgctgtga 29614340  T
Q  257 tcata 261  Q
    |||||    
T  29614341 tcata 29614345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 58 - 259
Target Start/End: Complemental strand, 18800497 - 18800296
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaata-aattgagggtta 156  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18800497 aaaactaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattgagggtta 18800398  T
Q  157 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 256  Q
    |||||| |||||||||||| |||||| || ||||||||| |||||||||  ||||||| | ||||||| ||||||| |||||||| | ||| || |||||    
T  18800397 gggtttgatgatgattctggagggaa-tgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatctatattgttgttgtga 18800299  T
Q  257 tca 259  Q
    |||    
T  18800298 tca 18800296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 66 - 241
Target Start/End: Complemental strand, 23839250 - 23839075
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagt-tttggaaaataaattgagggttagggtttaa 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||| |    
T  23839250 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtgtttggaagataaattgagggttagggtttga 23839151  T
Q  165 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 241  Q
    |||||||||| ||||| | |||||| ||||| |||||||||  ||||||| ||||||||||||||||||||||||||    
T  23839150 tgatgattct-aaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatct 23839075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 66 - 261
Target Start/End: Complemental strand, 4477909 - 4477714
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||| |    
T  4477909 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttga 4477810  T
Q  165 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 261  Q
    |||||||||||| ||||| |||||| ||||| || ||||||  ||||||| ||||||| |||||||||||||||||| | ||| || ||||||||||    
T  4477809 tgatgattctgaggggaa-tgggtattgatcatgctaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcata 4477714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 66 - 241
Target Start/End: Original strand, 10986184 - 10986359
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 164  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |    
T  10986184 ggtaagggtgagactatctttcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 10986283  T
Q  165 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 241  Q
    |||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||||||||||||||||||||||    
T  10986284 tgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatct 10986359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 930091 - 930227
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  930091 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgtatagttttgaaaaataaattgagggttag 930190  T
Q  158 ggtttaatgatgattctgaagggaattgggtaatgatc 195  Q
    ||||| |||||| |||||||||||| ||||||||||||    
T  930191 ggtttgatgatgtttctgaagggaa-tgggtaatgatc 930227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 58 - 176
Target Start/End: Complemental strand, 12168422 - 12168305
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  12168422 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 12168324  T
Q  158 ggtttaatgatgattctga 176  Q
    ||||| |||||||||||||    
T  12168323 ggtttgatgatgattctga 12168305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 58 - 176
Target Start/End: Complemental strand, 19287331 - 19287214
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  19287331 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 19287233  T
Q  158 ggtttaatgatgattctga 176  Q
    ||||| |||||||||||||    
T  19287232 ggtttgatgatgattctga 19287214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 58 - 176
Target Start/End: Original strand, 19785865 - 19785982
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||  ||||||||||||||||| |||  |||||    
T  19785865 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctagttgaatagttttggaaaataaaatgaaagttag 19785963  T
Q  158 ggtttaatgatgattctga 176  Q
    ||||| |||||||||||||    
T  19785964 ggtttgatgatgattctga 19785982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 58 - 176
Target Start/End: Complemental strand, 19878515 - 19878398
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  19878515 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 19878417  T
Q  158 ggtttaatgatgattctga 176  Q
    ||||| |||||||||||||    
T  19878416 ggtttgatgatgattctga 19878398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 58 - 176
Target Start/End: Complemental strand, 19884291 - 19884174
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  19884291 aaaactaaggttagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 19884193  T
Q  158 ggtttaatgatgattctga 176  Q
    ||||| |||||||||||||    
T  19884192 ggtttgatgatgattctga 19884174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 34639990 - 34640069
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataa 145  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  34639990 ggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaatagttttggaaaataa 34640069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 261
Target Start/End: Original strand, 21565215 - 21565410
Alignment:
Q  66 ggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 164  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||||||   |||   |  ||||||||||||||||||| |    
T  21565215 ggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttga 21565314  T
Q  165 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 261  Q
    |||||||||| ||||| | |||||||||||| ||||||||   ||||||| | | |||| |||||||| |||||||| |  || |||||||||||||    
T  21565315 tgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcata 21565410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 34646664 - 34646743
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataa 145  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  || |||||||||||||    
T  34646664 ggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaataattttggaaaataa 34646743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 176
Target Start/End: Original strand, 25469708 - 25469816
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||  | ||||||||||||||  |||   ||||||||| ||    
T  25469708 ggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaaataatatgaaaattagggtttgat 25469805  T
Q  166 gatgattctga 176  Q
    ||| |||||||    
T  25469806 gataattctga 25469816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 24512851 - 24512899
Alignment:
Q  70 agggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  24512851 agggtgagactatctctcaataatcatagtatataatttctgaaaattg 24512899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 9187547 - 9187498
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 115  Q
    ||||||||||||||||||||||||||||| ||||  ||||||||||||||    
T  9187547 ggtaagggtgagactatctctcaataatcttaatacataatttctgaaaa 9187498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 25348539 - 25348486
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  25348539 ggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 25348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 25598696 - 25598643
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||||||| |||||||| |||||||| |||| ||||||||||||||    
T  25598696 ggtaagggtgagactaactctcaatgatcataatatatattttctgaaaattga 25598643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 25397225 - 25397172
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  25397225 ggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 25397172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 2286770 - 2286823
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  2286770 ggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 2286823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 19471338 - 19471391
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||| ||| ||||| || |||||||| ||||||||||| |||||||    
T  19471338 ggtaagggtgaggctacctctcgatgatcataatatataatttctggaaattga 19471391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 31252474 - 31252413
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 127  Q
    ||||||||||||| ||||| | ||| || ||||| ||||||||||||||||| | |||||||    
T  31252474 ggtaagggtgagattatcttttaatgattataatatataatttctgaaaattaatctaattg 31252413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 148; Significance: 4e-78; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 58 - 261
Target Start/End: Complemental strand, 1237 - 1036
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  1237 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 1139  T
Q  158 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 257  Q
    ||||| |||| |||| ||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  1138 ggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatc-ttgttgttgctgtgat 1040  T
Q  258 cata 261  Q
    ||||    
T  1039 cata 1036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 148; Significance: 4e-78; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 58 - 261
Target Start/End: Complemental strand, 50238 - 50037
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  50238 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 50140  T
Q  158 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 257  Q
    ||||| |||| |||| ||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  50139 ggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatc-ttgttgttgctgtgat 50041  T
Q  258 cata 261  Q
    ||||    
T  50040 cata 50037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 140; Significance: 3e-73; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 58 - 261
Target Start/End: Original strand, 8045828 - 8046030
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  8045828 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 8045926  T
Q  158 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 257  Q
    ||||| | ||  ||||||||||||| ||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  8045927 ggtttgacgagaattctgaagggaaatgggtaaagataatgttaattctcttgtaatataatgttcagaatgaaaacttaatccttgttgttgctgtgat 8046026  T
Q  258 cata 261  Q
    ||||    
T  8046027 cata 8046030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 58 - 261
Target Start/End: Complemental strand, 11848173 - 11847964
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaa------ttgag 151  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || |||||||| ||||| ||      |||||    
T  11848173 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaatcaattgag 11848074  T
Q  152 ggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgc 251  Q
    ||||||||||| |||| |||||||||| | | |||||||||||| ||||||| |  || ||||||||||||||||||||||||||||||||||||| |||    
T  11848073 ggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatccttttataatataatgttcagaatgaaaacttaatctttgttgttgc 11847974  T
Q  252 tgtgatcata 261  Q
    ||||||||||    
T  11847973 tgtgatcata 11847964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 66 - 176
Target Start/End: Complemental strand, 53483756 - 53483646
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaat-tgagggttagggtttaa 164  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||  ||||||| |||||  ||| |||   ||||||||| |    
T  53483756 ggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggtttga 53483658  T
Q  165 tgatgattctga 176  Q
    ||||||||||||    
T  53483657 tgatgattctga 53483646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 15408191 - 15408139
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  15408191 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 15408139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 8834948 - 8834895
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  8834948 ggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 8834895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 13888694 - 13888641
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  13888694 ggtaagggtgaggctaactctcaatgatcataatgtataatttctgaaaattga 13888641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 14486712 - 14486661
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    ||||||||||||||||||  ||||| |||||||| |||||||||||||||||    
T  14486712 ggtaagggtgagactatccttcaatgatcataatatataatttctgaaaatt 14486661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 22724691 - 22724742
Alignment:
Q  68 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  22724691 taagggtgagactatctctcaataataatagtatagaatttctgaaaattga 22724742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 15245268 - 15245215
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||| ||| |||||||| ||| |||| |||||||||||||||||||    
T  15245268 ggtaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15245215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 15308171 - 15308120
Alignment:
Q  68 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||| ||| |||||||| ||| |||| |||||||||||||||||||    
T  15308171 taagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 117
Target Start/End: Complemental strand, 27906315 - 27906266
Alignment:
Q  68 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||| || ||||| ||||| |||||||| |||||||||||||||||    
T  27906315 taagggtgggattatctttcaatgatcataatgtataatttctgaaaatt 27906266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 15747552 - 15747592
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataa 98  Q
    ||||||| |||||||||||||||| ||||||||||| ||||    
T  15747552 aaaactaaggtaagggtgagactaactctcaataattataa 15747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 66 - 261
Target Start/End: Original strand, 14399 - 14595
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtttt-ggaaaataaattgagggttagggtttaa 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||| |    
T  14399 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 14498  T
Q  165 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 261  Q
    |||||||||||||||||| |||||||||||| |||||||||  ||||||| | |||||| ||||||||||||||||| || || |||||||||||||    
T  14499 tgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttccgaatgaaaacttaatctatgctgttgctgtgatcata 14595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 133; Significance: 4e-69; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 58 - 261
Target Start/End: Original strand, 746 - 949
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggtta 156  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  746 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaaaataaattgagggtta 845  T
Q  157 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 256  Q
    |||||| |||| |||| ||||||||| |||||||||||| || |||| | ||||||||||||||||||| || ||||||||||| |||||| || |||||    
T  846 gggtttgatgaggattatgaagggaaatgggtaatgatcatgataatactcttgtaatataatgttcaggataaaaacttaatc-ttgttgttgatgtga 944  T
Q  257 tcata 261  Q
    |||||    
T  945 tcata 949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 124; Significance: 9e-64; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 58 - 240
Target Start/End: Complemental strand, 11401 - 11219
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaata-aattgagggtta 156  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11401 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattgagggtta 11302  T
Q  157 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatc 240  Q
    |||||| |||||||||||| |||||| || ||||||||| |||||||||  ||||||| | ||||||| ||||||| |||||||    
T  11301 gggtttgatgatgattctggagggaa-tgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatc 11219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 9e-64; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 66 - 241
Target Start/End: Complemental strand, 44477674 - 44477500
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  44477674 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 44477575  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 241  Q
    ||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| ||||||||||||||||||    
T  44477574 gatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatct 44477500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 66 - 241
Target Start/End: Complemental strand, 44492832 - 44492658
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  44492832 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 44492733  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 241  Q
    ||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| ||||||||||||||||||    
T  44492732 gatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatct 44492658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 58 - 242
Target Start/End: Complemental strand, 23866674 - 23866490
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  23866674 aaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 23866576  T
Q  158 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaacttaatctt 242  Q
    ||||| ||||||||| ||||| ||| |||||||||||| |||||||||   |||||||||||||||||||||  ||||||||||||    
T  23866575 ggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatctt 23866490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 66 - 241
Target Start/End: Original strand, 8727736 - 8727911
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 164  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |    
T  8727736 ggtaagggtgagattatccctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 8727835  T
Q  165 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 241  Q
     ||||||||||| ||| | |||||| ||||| |||||||||  ||||||| ||||||||||||||||||||||||||    
T  8727836 cgatgattctgaggggta-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatct 8727911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 66 - 176
Target Start/End: Complemental strand, 17054642 - 17054533
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||||  |||  |||||||||| ||    
T  17054642 ggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtttgat 17054544  T
Q  166 gatgattctga 176  Q
    |||||||||||    
T  17054543 gatgattctga 17054533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 119
Target Start/End: Complemental strand, 18614381 - 18614271
Alignment:
Q  9 tgagatgaacaagtatagtcagagaatctggtcgttgtgcgttt-cttctaaaactatggtaagggtgagactatctctcaataatcataatctataatt 107  Q
    ||||| ||||||||| |||||||||||| | || |||||||||| ||||||||  || ||||||||||||||||||||||||||||||| || |||||||    
T  18614381 tgagaagaacaagtagagtcagagaatccgatcattgtgcgttttcttctaaat-taaggtaagggtgagactatctctcaataatcatgatatataatt 18614283  T
Q  108 tctgaaaattga 119  Q
    ||||||||||||    
T  18614282 tctgaaaattga 18614271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 23482056 - 23482117
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 127  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23482056 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23482117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 241
Target Start/End: Original strand, 27940946 - 27941032
Alignment:
Q  154 ttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 241  Q
    ||||||||| ||||||||||||| |||||| ||||| ||||| |||||||||  ||||||| |||||||||||||||||| |||||||    
T  27940946 ttagggtttgatgatgattctgaggggaat-gggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaatttaatct 27941032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 39364972 - 39364919
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  39364972 ggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 39364919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 29643389 - 29643440
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    ||||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  29643389 ggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 29643440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 14056567 - 14056619
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    |||||||||||||||||||||||||||| ||| | | ||| ||||||||||||    
T  14056567 ggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 14056619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 25112028 - 25111976
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    |||||||||||||||||||||||||||| ||| | | ||| ||||||||||||    
T  25112028 ggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 25111976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 24320674 - 24320725
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  24320674 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 24320725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 21931749 - 21931696
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||| ||| |||||||| || ||||| ||||| |||||||||||||    
T  21931749 ggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 21931696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 9e-64; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 66 - 241
Target Start/End: Complemental strand, 6483769 - 6483595
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  6483769 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 6483670  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 241  Q
    ||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| ||||||||||||||||||    
T  6483669 gatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatct 6483595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 66 - 241
Target Start/End: Complemental strand, 6487236 - 6487062
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  6487236 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 6487137  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 241  Q
    ||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| ||||||||||||||||||    
T  6487136 gatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatct 6487062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 66 - 261
Target Start/End: Original strand, 19661457 - 19661651
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  19661457 ggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgat 19661556  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 261  Q
    ||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| |||||||||||||||||| | ||| || ||||||||||    
T  19661557 gatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcata 19661651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 58 - 231
Target Start/End: Complemental strand, 26583886 - 26583715
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  26583886 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 26583788  T
Q  158 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaa 231  Q
    || || ||||||||||||| |||||  ||||||||||| |||||| |   ||||||  | ||||||||||||||    
T  26583787 ggcttgatgatgattctgaggggaa-agggtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaa 26583715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 66 - 241
Target Start/End: Complemental strand, 23879059 - 23878885
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    ||||||||||||||||||||||| |||| || || |||||||||  ||||||||||||||||||||   |||   | |||||||||||||||||||   |    
T  23879059 ggtaagggtgagactatctctcattaataattatatataatttcgaaaaattgacctaattgcttaaccttgaggattaaattgagggttagggttgt-t 23878961  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 241  Q
    ||||||||||| |||||| ||||||||||| ||||||||   ||||||| | ||||||||||||||| ||||||||    
T  23878960 gatgattctgaggggaatggggtaatgatcatgttaattatgttgtaatgtgatgttcagaatgaaatcttaatct 23878885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 261
Target Start/End: Original strand, 23089058 - 23089253
Alignment:
Q  66 ggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 164  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||||||   |||   |  ||||||||||||||||||| |    
T  23089058 ggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttga 23089157  T
Q  165 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 261  Q
    |||||||||| ||||| | |||||||||||| ||||||||   ||||||| | | |||| |||||||| |||||||| |  || |||||||||||||    
T  23089158 tgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcata 23089253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 66 - 241
Target Start/End: Original strand, 23101466 - 23101641
Alignment:
Q  66 ggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 164  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| ||||||||||||||||| |||   |||   |  ||||||||||||||||||| |    
T  23101466 ggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgtttaaccttgaggataaaattgagggttagggtttga 23101565  T
Q  165 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 241  Q
    |||||||||||| ||||| |||||||||||| ||||||||   ||||||| | | |||| |||||||| ||||||||    
T  23101566 tgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatct 23101641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 66 - 176
Target Start/End: Original strand, 5706027 - 5706137
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaat-tgagggttagggtttaa 164  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||  ||||||| |||||  ||| |||   ||||||||| |    
T  5706027 ggtaagggtgagactatctctcattaatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggtttga 5706125  T
Q  165 tgatgattctga 176  Q
    ||||||||||||    
T  5706126 tgatgattctga 5706137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 23265194 - 23265133
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 127  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23265194 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23265133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 23280262 - 23280201
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 127  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23280262 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23280201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 66 - 124
Target Start/End: Complemental strand, 21908411 - 21908353
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaa 124  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  21908411 ggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 21908353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 24661629 - 24661576
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  24661629 ggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 24661576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 10628 - 10577
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  10628 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 10577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 25180933 - 25180984
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  25180933 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 25180984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 166
Target Start/End: Complemental strand, 26885233 - 26885133
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtt-ttggaaaataaattgagggttagggtttaa 164  Q
    |||||||||| || ||||| ||||||||| |||| ||||||||||||||||| | ||||| |  ||||| ||||| || ||||||||  ||||||| |||    
T  26885233 ggtaagggtgggattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagttcttggagaaaaaattgagaattagggtataa 26885135  T
Q  165 tg 166  Q
    ||    
T  26885134 tg 26885133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 58 - 261
Target Start/End: Original strand, 1893 - 2095
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcttagttttggaaaataaattgagggtta 156  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||| ||||||||||    
T  1893 aaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggtta 1992  T
Q  157 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 256  Q
    |||||| ||||||||| ||| ||  | |||||||||||  ||||||||| |||||||| ||||||||| ||||||||||||||| |||||| ||||||||    
T  1993 gggtttgatgatgattttgatgg--aatgggtaatgattatgttaattctcttgtaatttaatgttcataatgaaaacttaatccttgttgttgctgtga 2090  T
Q  257 tcata 261  Q
    |||||    
T  2091 tcata 2095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 58 - 261
Target Start/End: Original strand, 8570 - 8772
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcttagttttggaaaataaattgagggtta 156  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||| ||||||||||    
T  8570 aaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggtta 8669  T
Q  157 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 256  Q
    |||||| ||||||||| ||| ||  | |||||||||||  ||||||||| |||||||| ||||||||| ||||||||||||||| |||||| ||||||||    
T  8670 gggtttgatgatgattatgatgg--aatgggtaatgattatgttaattctcttgtaatttaatgttcaaaatgaaaacttaatccttgttgttgctgtga 8767  T
Q  257 tcata 261  Q
    |||||    
T  8768 tcata 8772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 121; Significance: 6e-62; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 66 - 241
Target Start/End: Original strand, 20437027 - 20437202
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |    
T  20437027 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 20437126  T
Q  165 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 241  Q
    |||||||||||| ||||| |||||| ||||| ||||||||   ||||||| ||||||||||||||||||||||||||    
T  20437127 tgatgattctgaggggaa-tgggtattgatcatgttaattatgttgtaatgtaatgttcagaatgaaaacttaatct 20437202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 58 - 176
Target Start/End: Complemental strand, 41112094 - 41111977
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||| |||||||  |||  |||||    
T  41112094 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttgaaaaataagatgaaagttag 41111996  T
Q  158 ggtttaatgatgattctga 176  Q
    ||||| |||||||||||||    
T  41111995 ggtttgatgatgattctga 41111977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 32651681 - 32651563
Alignment:
Q  9 tgagatgaacaagtatagtcagagaatctggtcgttgtgcgttt-cttctaaaactatggtaagggtgagactatctctcaataatcataatctataatt 107  Q
    ||||| ||||||||  |||||||||||| | |||||||| |||| ||||||||  || |||||||||||||||||||||||||||||||| | |||||||    
T  32651681 tgagaagaacaagtggagtcagagaatccgatcgttgtgtgttttcttctaaat-taaggtaagggtgagactatctctcaataatcatagtatataatt 32651583  T
Q  108 tctgaaaattgacctaattg 127  Q
    |||||||||||| |||||||    
T  32651582 tctgaaaattgatctaattg 32651563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 18712851 - 18712790
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 127  Q
    |||| ||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  18712851 ggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 18712790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 19663520 - 19663572
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  19663520 ggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 19663572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 10811786 - 10811839
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  10811786 ggtaagggtgagactatctctcaataataatagtgtagaatttctgaaaattga 10811839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 20805373 - 20805320
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  20805373 ggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 20805320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 11158145 - 11158093
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    |||||||||||||||| |||||||| ||| |||| ||||||||||||||||||    
T  11158145 ggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 11158093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 20851136 - 20851187
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20851136 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20851187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 20857763 - 20857814
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20857763 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20857814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 21706327 - 21706276
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  21706327 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21706276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 21710869 - 21710818
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  21710869 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21710818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 58 - 261
Target Start/End: Complemental strand, 350 - 149
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  350 aaaactaaggtaagggtgagactatctctcaataaccataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 252  T
Q  158 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 257  Q
    ||||| ||||||||||||| ||||| |||||||||||| ||||||||  |||||| |||  |||||||| |||| ||||||||| ||||  || ||||||    
T  251 ggtttgatgatgattctgaggggaa-tgggtaatgatcatgttaattttcttgtattatggtgttcagattgaagacttaatctatgttattgatgtgat 153  T
Q  258 cata 261  Q
    ||||    
T  152 cata 149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 66 - 241
Target Start/End: Original strand, 10199 - 10374
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 164  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||| |    
T  10199 ggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttga 10298  T
Q  165 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 241  Q
    |||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  10299 tgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatct 10374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 66 - 241
Target Start/End: Original strand, 1529 - 1704
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 164  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||| |    
T  1529 ggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttga 1628  T
Q  165 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 241  Q
    |||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  1629 tgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatct 1704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 58 - 260
Target Start/End: Complemental strand, 18229 - 18026
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggtta 156  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  18229 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcttagctttaggaaaataaattgagggtta 18130  T
Q  157 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtg 255  Q
     ||||||||||||||||| | ||||| | ||||||| || |||||||||   ||||||| | |||| |||||||||||||||| || ||||| |||||||    
T  18129 aggtttaatgatgattctaacgggaaat-ggtaatggtcatgttaattctgtttgtaatgtgatgtccagaatgaaaacttaacctatgttgttgctgtg 18031  T
Q  256 atcat 260  Q
    |||||    
T  18030 atcat 18026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 108; Significance: 3e-54; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 10 - 145
Target Start/End: Complemental strand, 1039 - 904
Alignment:
Q  10 gagatgaacaagtatagtcagagaatctggtcgttgtgcgtttcttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttc 109  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  1039 gagaagaacaagtatagtcagagaatccggtcgttgtgcgtttcttctaaaactaaggtaagggtgagactatctctcaataatcataatctatagtttc 940  T
Q  110 tgaaaattgacctaattgcttagttttggaaaataa 145  Q
    ||||||||||||||||||| |||| |||||| ||||    
T  939 tgaaaattgacctaattgcatagtcttggaagataa 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 10 - 145
Target Start/End: Complemental strand, 8184 - 8049
Alignment:
Q  10 gagatgaacaagtatagtcagagaatctggtcgttgtgcgtttcttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttc 109  Q
    |||| ||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  8184 gagaagaacaagtagagtcagagaatccggtcgttgtgcgtttcttctaaaactaaggtaagggtgagactatctctcaataatcataatctatagtttc 8085  T
Q  110 tgaaaattgacctaattgcttagttttggaaaataa 145  Q
    ||||||||||||||||||| |||| |||||| ||||    
T  8084 tgaaaattgacctaattgcatagtcttggaagataa 8049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 261
Target Start/End: Complemental strand, 899 - 846
Alignment:
Q  208 ttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 261  Q
    ||||||| | |||||||||||||||||||||||| ||||| |||||||||||||    
T  899 ttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcata 846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 261
Target Start/End: Complemental strand, 8044 - 7991
Alignment:
Q  208 ttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 261  Q
    ||||||| | |||||||||||||||||||||||| ||||| |||||||||||||    
T  8044 ttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcata 7991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 58 - 202
Target Start/End: Complemental strand, 30917 - 30772
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaat-aaattgagggtta 156  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  | ||||||||| |||    
T  30917 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaggtaaaattgaggatta 30818  T
Q  157 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaa 202  Q
    |||||| ||||||||| ||| |||||| | |||| |||| ||||||    
T  30817 gggtttgatgatgattttgaggggaatggtgtaacgatcatgttaa 30772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 58 - 176
Target Start/End: Original strand, 1728 - 1845
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  1728 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagttag 1826  T
Q  158 ggtttaatgatgattctga 176  Q
    ||||| |||||||||||||    
T  1827 ggtttgatgatgattctga 1845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 58 - 176
Target Start/End: Original strand, 5751 - 5868
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  5751 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagttag 5849  T
Q  158 ggtttaatgatgattctga 176  Q
    ||||| |||||||||||||    
T  5850 ggtttgatgatgattctga 5868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 66 - 259
Target Start/End: Original strand, 3296 - 3490
Alignment:
Q  66 ggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 164  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||||||   ||||  |  ||||||||||||||||||| |    
T  3296 ggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttggggataaaattgagggttagggtttga 3395  T
Q  165 tgatgattctgaagggaattgggtaatg-atcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatca 259  Q
    |||||||||||| ||||| ||||||||| ||| ||||||||   ||||||| | ||||||||||||||| |||||||| |  || |||||||||||    
T  3396 tgatgattctgaggggaa-tgggtaatgaatcatgttaattttgttgtaatgtgatgttcagaatgaaatcttaatctatactgttgctgtgatca 3490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 241
Target Start/End: Original strand, 3625 - 3800
Alignment:
Q  66 ggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 164  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||||||   |||   |  ||||||||||||||||||| |    
T  3625 ggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttga 3724  T
Q  165 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 241  Q
    |||||||||||| ||| | |||||||||||| ||||||||   ||||||| | |||||| |||||||| ||||||||    
T  3725 tgatgattctgaggggga-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatct 3800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 116998 - 116887
Alignment:
Q  16 aacaagtatagtcagagaatctggtcgttgtgcgttt-cttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaa 114  Q
    |||||||  |||||||||||| | |||||||| |||| ||||||||  || |||||||||||||||||||||||||||||||| | ||||||||||||||    
T  116998 aacaagtggagtcagagaatccgatcgttgtgtgttttcttctaaat-taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaa 116900  T
Q  115 attgacctaattg 127  Q
    ||||| |||||||    
T  116899 attgatctaattg 116887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 66 - 174
Target Start/End: Original strand, 45278 - 45386
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaat-tgagggttagggtttaa 164  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||  ||||||| |||||  ||| |||   ||||||||| |    
T  45278 ggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggtttga 45376  T
Q  165 tgatgattct 174  Q
    ||||||||||    
T  45377 tgatgattct 45386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 16872 - 16811
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 127  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  16872 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 16811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 11 - 72
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 127  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  11 ggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 72  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 13684 - 13623
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 127  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  13684 ggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 13623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 101931 - 101992
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 127  Q
    |||||||||||||||||||||||||||||||| | ||||||| ||||||||||| |||||||    
T  101931 ggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattg 101992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 17695 - 17643
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  17695 ggtaagggtgagactatctctcaataaccataatgtataatttctgaaaattg 17643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 40535 - 40587
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  40535 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 40587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 135525 - 135473
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  135525 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 135473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 22596 - 22646
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaat 116  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  22596 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaat 22646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 34279 - 34331
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  34279 ggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 34331  T

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Target: scaffold0138 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 12349 - 12296
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  12349 ggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 12296  T

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Target: scaffold0317 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 1438 - 1378
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaatt 126  Q
    ||||||||||||||||||| ||||| ||||| || |||||||| |||||||||| ||||||    
T  1438 ggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaatt 1378  T

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Target: scaffold0139 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 15000 - 15052
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    |||||||||||||||| |||||||| ||| |||| ||||||||||||||||||    
T  15000 ggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 15052  T

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Target: scaffold0634 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 261
Target Start/End: Complemental strand, 3558 - 3519
Alignment:
Q  222 tcagaatgaaaacttaatctttgttgctgctgtgatcata 261  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  3558 tcagaatgaaaacttaatctttgttgttgctgtgatcata 3519  T

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Target: scaffold0096 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 39510 - 39563
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||| ||| |||||||| |||||||| ||||||||| |||||||||    
T  39510 ggtaagggtgaggctaactctcaatgatcataatatataatttcagaaaattga 39563  T

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Target: scaffold0815 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 1501 - 1453
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaa 114  Q
    |||||||||||||||| |||||||| ||| |||| ||||||||||||||    
T  1501 ggtaagggtgagactaactctcaatgatcttaatgtataatttctgaaa 1453  T

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Target: scaffold1318 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 1916 - 1967
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  1916 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 1967  T

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Target: scaffold0348 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 9387 - 9336
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  9387 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 9336  T

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Target: scaffold0127 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 10290 - 10239
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    ||||||||||||| |||||  ||||||||||||| | |||||||||||||||    
T  10290 ggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 10239  T

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Target: scaffold0023 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 135489 - 135438
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||| |||||| ||||| |||||| ||||||| |||||||||||||||||    
T  135489 ggtaagcgtgagattatctttcaatagtcataatatataatttctgaaaatt 135438  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 493032 - 493082
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    ||||||||||||| ||||| ||||||||| |||| |||||||||||||||||    
T  493032 ggtaagggtgagattatctttcaataatc-taatgtataatttctgaaaatt 493082  T

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Target: scaffold2054 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 151
Target Start/End: Complemental strand, 774 - 680
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcttagttttggaaaataaattgag 151  Q
    ||||||| |||||||||| || ||||| ||||| ||| |||| ||||||||||| |||||| ||||||  |  ||||| | ||||||||||||||    
T  774 aaaactaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaaattaacctaaaagaatagttcttgaaaataaattgag 680  T

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Target: scaffold0609 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 5861 - 5922
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 127  Q
    |||||||||| || ||||| ||||| || ||||| ||||||||||||||||| | |||||||    
T  5861 ggtaagggtgggattatctttcaatgattataatatataatttctgaaaattaatctaattg 5922  T

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Target: scaffold0335 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 2631 - 2684
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||| ||| |||||||| || ||||| ||||| |||||||||||||    
T  2631 ggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 2684  T

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