View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2996_high_21 (Length: 203)
Name: NF2996_high_21
Description: NF2996
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2996_high_21 |
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Alignment Details
Target: chr8 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 3 - 187
Target Start/End: Complemental strand, 27051551 - 27051371
Alignment:
| Q |
3 |
gcaattaccttcaaagtctctgaaaatacctccacatgcaagaagtgccaggatttcgcaaagatgctccatctgtattacatttaagccaccgaagagg |
102 |
Q |
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| T |
27051551 |
gcaattaccttcaaagtctctgaaaatacctccaca----agaagtgctaggattttgcaaagatactccatctgtattacatttaagccaccgaagagg |
27051456 |
T |
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| Q |
103 |
aggaggctgctagattactttaataatggtgggagctctaggttgcttgatattgaccgtaaaagattttaggattgtaaagtct |
187 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27051455 |
aggaggctgctagattacttcaataatggtgggagctctaggttgcttgatattgaccgtaaaagattttaggattgtaaagtct |
27051371 |
T |
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