View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2997_low_2 (Length: 669)
Name: NF2997_low_2
Description: NF2997
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2997_low_2 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 521; Significance: 0; HSPs: 21)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 521; E-Value: 0
Query Start/End: Original strand, 35 - 659
Target Start/End: Complemental strand, 6333663 - 6333038
Alignment:
| Q |
35 |
catatttagaaggtcttgttacctccataccaattttgggagcagggcaatctgcatttcatgttcattttgaatgggacagtgagatgggaactccagg |
134 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
6333663 |
catatttagaaggtcttgttacctccataccaattttgggagcagggcaatctgcatttgatgttcattttgaatgggacagtgagatgggaattccagg |
6333564 |
T |
|
| Q |
135 |
agcattttatattgaaaatttcatgctaggagaattcttccttgtgagtttgacccttgaagatattcccattcatggaaccatcaactttgtttgcaac |
234 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
6333563 |
agcattttatattgaaaatttcatgctaggagaattcttccttgtaagtttgacgcttgaagatattcccatccatggaaccatcaactttgtttgcaac |
6333464 |
T |
|
| Q |
235 |
tcatggatttacaatgctaaaaagtataaaacgaaacgcatcttctttacaaacaaggtaatgnnnnnnn-tcataaatctctaacatgttaatacaaat |
333 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||| ||||||| |||||||||| |
|
|
| T |
6333463 |
tcatggatttacaatgctaaaaagtataaaacgaaacgcatcttctttacgaacaaggtaatgaaaaaaaatcatatttctttaacatgctaatacaaat |
6333364 |
T |
|
| Q |
334 |
tatatttctcaaaatttgacaccattaaataaatataaatatagacataccttccaagtgatacaccagctccattagtctactacagacaagaagaatt |
433 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6333363 |
tatatttctcaaaatttgacaccgataaataaatataaatatagacgtaccttccaagcgaaacaccagctccattagtctactacagacaagaagaatt |
6333264 |
T |
|
| Q |
434 |
gaagactttaagaggagatggaacgggtgagcgcaaagaatcagataggatctatgactacgatgtttacaatgacttgggtgatcctgacaggaaagaa |
533 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
6333263 |
gaagactttaagaggagatggaacgggtgagcgcaaagaatcggataggatctatgactacgatgtttacaatgacttgggtgatcctgacaagaaagaa |
6333164 |
T |
|
| Q |
534 |
agcttgggtcgtcccgttgttggaggatccaataacttgccttaccctcgaagggggagaaccggcaggaaacatgctaaaaaaggtgataaactttatg |
633 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6333163 |
agcttggctcgtcccgttgttggaggatccaataacttgccttaccctcgaagggggagaaccggcaggaaacatgctaaaaaaggtgataaactttatg |
6333064 |
T |
|
| Q |
634 |
ctctatcttaagttaacggtcctatg |
659 |
Q |
| |
|
|||||||||||||||| ||||||||| |
|
|
| T |
6333063 |
ctctatcttaagttaaaggtcctatg |
6333038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 43 - 620
Target Start/End: Complemental strand, 6276230 - 6275649
Alignment:
| Q |
43 |
gaaggtcttgttacctccataccaattttgggagcagggcaatctgcatttcatgttcattttgaatgggacagtgagatgggaactccaggagcatttt |
142 |
Q |
| |
|
|||||| |||||||||| ||||||| | ||||| || || ||||||| | ||||||||||||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
6276230 |
gaaggttttgttacctctgcaccaattctaggagctggacagtctgcatacaaagttcattttgaatgggatagtgagatgggaattccaggagcatttt |
6276131 |
T |
|
| Q |
143 |
atattgaaaatttcatgctaggagaattcttccttgtgagtttgacccttgaagatattcccattcatggaaccatcaactttgtttgcaactcatggat |
242 |
Q |
| |
|
||||||| ||||||||||||||||||||||| ||||| ||||| || |||||||||||||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
6276130 |
atattgagaatttcatgctaggagaattctttcttgtaagtttaacacttgaagatattcctaaccatggaaccatcaactttgtttgcaactcatggat |
6276031 |
T |
|
| Q |
243 |
ttacaatgctaaaaagtataaaacgaaacgcatcttctttacaaacaaggtaatgnnnnnnn----tcataaatctctaacatgttaatacaaattatat |
338 |
Q |
| |
|
||||||| | |||||| ||||| ||||||| |||||| | ||||||||||| ||| | | ||| |||| |||| | | ||| || |
|
|
| T |
6276030 |
ttacaattgtcgaaagtacaaaactgaacgcattttctttgccaacaaggtaattatcaaaaaatatcaaatttatcttacatcttaa-atatcttacat |
6275932 |
T |
|
| Q |
339 |
ttctcaaaatttgacaccattaaataaa-tataaatatagacataccttccaagtgatacaccagctccattagtctactacagacaagaagaattgaag |
437 |
Q |
| |
|
|| ||||||||||||| ||||| |||| |||||||||||||||| ||||||||||| |||||| |||||||||||||||| ||||||||||| ||||| |
|
|
| T |
6275931 |
tttccaaaatttgacactattaactaaaatataaatatagacatatcttccaagtgaaacaccacctccattagtctactatagacaagaagagttgaac |
6275832 |
T |
|
| Q |
438 |
actttaagaggagatggaacgggtgagcgcaaagaatcagataggatctatgactacgatgtttacaatgacttgggtgatcctgacaggaaagaaagct |
537 |
Q |
| |
|
|||||||||||||||||||| || ||||| ||||||| || |||||||||||||||||||| |||||||| ||||||||||||||| ||||| ||||| |
|
|
| T |
6275831 |
actttaagaggagatggaacaggagagcgtaaagaatgggaaaggatctatgactacgatgtctacaatgatgtgggtgatcctgacaagaaagcaagct |
6275732 |
T |
|
| Q |
538 |
tgggtcgtcccgttgttggaggatccaataacttgccttaccctcgaagggggagaaccggcaggaaacatgctaaaaaaggt |
620 |
Q |
| |
|
||| |||||||||| ||||||||||||| | |||||||||||||||||| ||||||||||||||||||| ||||| |||||| |
|
|
| T |
6275731 |
tggctcgtcccgttattggaggatccaacaccttgccttaccctcgaagagggagaaccggcaggaaaccagctaagaaaggt |
6275649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 75 - 630
Target Start/End: Complemental strand, 6290946 - 6290391
Alignment:
| Q |
75 |
agcagggcaatctgcatttcatgttcattttgaatgggacagtgagatgggaactccaggagcattttatattgaaaatttcatgctaggagaattcttc |
174 |
Q |
| |
|
|||||||||||||| |||| ||||||||||| ||||||| ||||| ||||||| ||||||||||||||||||| | ||| || || | |||||||||| |
|
|
| T |
6290946 |
agcagggcaatctgaatttgatgttcattttaaatgggatagtgacatgggaattccaggagcattttatattaagaatcgcaagcaaagagaattcttt |
6290847 |
T |
|
| Q |
175 |
cttgtgagtttgacccttgaagatattcccattcatggaaccatcaactttgtttgcaactcatggatttacaatgctaaaaagtataaaacgaaacgca |
274 |
Q |
| |
|
||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||| |||||| |
|
|
| T |
6290846 |
cttgtaagtttgacccttgaagatgttcccaaccatggaaccatcaactttgtttgcaactcatggatttacaatgctcaaaactacaaaactgaacgca |
6290747 |
T |
|
| Q |
275 |
tcttctttacaaacaaggtaatgnnnnnnntcataaatctctaacatgtt-aatacaaattatatttctcaaaatttgacaccattaaataaatataaat |
373 |
Q |
| |
|
|||||||| | |||||||||||| |||| | ||| |||||| |||| ||| |||| ||| |||||| ||||||| | | || | | |||| |
|
|
| T |
6290746 |
tcttctttgccaacaaggtaatgaatatac-catatttatcttgcatgttaaatataaactatagttcccaaaatctgacaccttcatatgatttaaaat |
6290648 |
T |
|
| Q |
374 |
atagacataccttccaagtgatacaccagctccattagtctactacagacaagaagaattgaagactttaagaggagatggaacgggtgagcgcaaagaa |
473 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| || |||||||| ||| |
|
|
| T |
6290647 |
atagacataccttccaagtgaaacaccagctccattagtgtactatagacaagaagaattgaagactttaagaggagatggaacaggagagcgcaaggaa |
6290548 |
T |
|
| Q |
474 |
tcagataggatctatgactacgatgtttacaatgacttgggtgatcctgacaggaaagaaagcttgggtcgtcccgttgttggaggatccaataacttgc |
573 |
Q |
| |
|
| || || || ||||| |||||||| |||||||| || ||||| |||||| |||| |||| |||| || |||| ||||| | || || | |
|
|
| T |
6290547 |
tgggaaagaatatatgattacgatgtctacaatgatttaggtgagcctgactcgaaacctcaattggcgcgtcaaattcttgggggatcgagcaatttcc |
6290448 |
T |
|
| Q |
574 |
cttaccctcgaagggggagaaccggcaggaaacatgctaaaaaaggtgataaacttt |
630 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||| ||||| |||||| ||||||||| |
|
|
| T |
6290447 |
cttaccctcgaaggggaagaaccggcagggaaccagctaagaaaggttataaacttt |
6290391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 352 - 625
Target Start/End: Complemental strand, 6322778 - 6322505
Alignment:
| Q |
352 |
acaccattaaataaatataaatatagacataccttccaagtgatacaccagctccattagtctactacagacaagaagaattgaagactttaagaggaga |
451 |
Q |
| |
|
||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
6322778 |
acaccatcaaataaataaaaatatagacataccttccaagtgaaacaccagctccattagtctactatagagaagaagaattgaagactttaagaggaga |
6322679 |
T |
|
| Q |
452 |
tggaacgggtgagcgcaaagaatcagataggatctatgactacgatgtttacaatgacttgggtgatcctgacaggaaagaaagcttgggtcgtcccgtt |
551 |
Q |
| |
|
|||||||||| ||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||| | | | | ||||| |||||||||| |
|
|
| T |
6322678 |
tggaacgggtcagcgcaaggaacacgatagaatctatgactacgatgtttacaatgacttgggtgatcctgacaagtacgcacacttggctcgtcccgtt |
6322579 |
T |
|
| Q |
552 |
gttggaggatccaataacttgccttaccctcgaagggggagaaccggcaggaaacatgctaaaaaaggtgataa |
625 |
Q |
| |
|
||||||||||| | | ||||||||||||||||||||| |||||||||||||||| |||||||||||| |||| |
|
|
| T |
6322578 |
attggaggatccgacaccttgccttaccctcgaaggggcagaaccggcaggaaaccagctaaaaaaggttataa |
6322505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 165; E-Value: 7e-88
Query Start/End: Original strand, 96 - 620
Target Start/End: Complemental strand, 6425705 - 6425183
Alignment:
| Q |
96 |
tgttcattttgaatgggacagtgagatgggaactccaggagcattttatattgaaaatttcatgctaggagaattcttccttgtgagtttgacccttgaa |
195 |
Q |
| |
|
||||||||||||||||| |||||| ||||||| |||||||||||| |||||||| ||||| ||| | || |||||||||||||||||||| |||||| |
|
|
| T |
6425705 |
tgttcattttgaatggggcagtgacatgggaattccaggagcattctatattgagaattttttgcaacatgagttcttccttgtgagtttgacacttgaa |
6425606 |
T |
|
| Q |
196 |
gatattcccattcatggaaccatcaactttgtttgcaactcatggatttacaatgctaaaaagtataaaacgaaacgcatcttctttacaaacaaggtaa |
295 |
Q |
| |
|
||| |||| | ||||||||||||||||||||||||||||| ||| ||||||||| ||||| || |||| | |||||||| || | |||||||||| |
|
|
| T |
6425605 |
gatgttccaaaccatggaaccatcaactttgtttgcaactcttgggtttacaatgacaaaaaatacaaaagtgaccgcatctttttcgctaacaaggtaa |
6425506 |
T |
|
| Q |
296 |
tgnnnnnnntcataaatctctaacatgttaa-tacaaattatatttctcaaaatttgacaccattaaataaatataaatatagacataccttccaagtga |
394 |
Q |
| |
|
| ||||| | | | | ||||| || ||||||| ||||||||| |||||| ||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
6425505 |
agaaaaac-tcatatttatttgtctagttaagtataaattat--ttctcaaaacttgacatgattaagtaaatataaatgtagacataccttccaagtga |
6425409 |
T |
|
| Q |
395 |
tacaccagctccattagtctactacagacaagaagaattgaagactttaagaggagatggaacgggtgagcgcaaagaatcagataggatctatgactac |
494 |
Q |
| |
|
||||| |||||||| || ||||| ||||||||||| ||||||||||||||||||||||||| || |||||||| |||| || ||||||||||| ||| |
|
|
| T |
6425408 |
aacaccggctccattggtgtactatagacaagaagagttgaagactttaagaggagatggaaaaggagagcgcaaggaatgggaaaggatctatgattac |
6425309 |
T |
|
| Q |
495 |
gatgtttacaatgacttgggtgatcctgacaggaaagaaagcttgggtcgtcccgttgttggaggatccaataacttgccttaccctcgaagggggagaa |
594 |
Q |
| |
|
||||| |||||||| |||||||| |||||| |||| | |||||||||||| ||| |||||||||| | | |||||||||||||||||||||||||| |
|
|
| T |
6425308 |
gatgtctacaatgatttgggtgagcctgactcgaaacctaccttgggtcgtccagttcttggaggatcgagcaccttgccttaccctcgaagggggagaa |
6425209 |
T |
|
| Q |
595 |
ccggcaggaaacatgctaaaaaaggt |
620 |
Q |
| |
|
| ||||| |||| |||||||||||| |
|
|
| T |
6425208 |
caggcagaaaaccagctaaaaaaggt |
6425183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 170 - 517
Target Start/End: Complemental strand, 6371658 - 6371300
Alignment:
| Q |
170 |
tcttccttgtgagtttgacccttgaagatattcccattcatggaaccatcaactttgtttgcaactcatggatttacaatgctaaaaagtataaaacgaa |
269 |
Q |
| |
|
||||||||||||||||||||||| | ||| |||| | ||||||||||||||||||| ||||||||||||||||||||||||||||| ||| | | | |
|
|
| T |
6371658 |
tcttccttgtgagtttgacccttaatgatgttccaaatcatggaaccatcaactttaactgcaactcatggatttacaatgctaaaaactatcactctga |
6371559 |
T |
|
| Q |
270 |
acgcatcttctttacaaacaaggtaatgnnnnnnntcataaa------tctctaacatgtta-atacaaattatattt------ctcaaaatttgacacc |
356 |
Q |
| |
|
|||||||||||||| |||||||||||| ||||| | ||| |||||||| ||| | ||||||||| ||||||||||||||| |
|
|
| T |
6371558 |
gcgcatcttctttaccaacaaggtaatgaaaactatcatattcatatttatcttacatgttatatatatattatatttatatatctcaaaatttgacact |
6371459 |
T |
|
| Q |
357 |
attaaataaatataaatatagacataccttccaagtgatacaccagctccattagtctactacagacaagaagaattgaagactttaagaggagatggaa |
456 |
Q |
| |
|
|| ||||||| | ||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
6371458 |
atgaaataaaaa--aatgtagacataccttctaagtgaaacaccagctccattagtctactacagacaagaagagttgaagactttaagaggagatggaa |
6371361 |
T |
|
| Q |
457 |
cgggtgagcgcaaagaatcagataggatctatgactacgatgtttacaatgacttgggtga |
517 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||| |
|
|
| T |
6371360 |
cgggtgagcgcaaagaatgggataggatctatgactacgatgtctacaatgatttgggtga |
6371300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 43 - 297
Target Start/End: Complemental strand, 6323205 - 6322951
Alignment:
| Q |
43 |
gaaggtcttgttacctccataccaattttgggagcagggcaatctgcatttcatgttcattttgaatgggacagtgagatgggaactccaggagcatttt |
142 |
Q |
| |
|
|||||| ||||||| ||||| ||||||||||||||||| || ||||||| | || |||||||||||||| | ||||| |||||| |||||||||||||| |
|
|
| T |
6323205 |
gaaggttttgttacttccatgccaattttgggagcaggacagtctgcatatgatattcattttgaatggaatagtgacatgggagttccaggagcatttt |
6323106 |
T |
|
| Q |
143 |
atattgaaaatttcatgctaggagaattcttccttgtgagtttgacccttgaagatattcccattcatggaaccatcaactttgtttgcaactcatggat |
242 |
Q |
| |
|
||||||| | | |||| | |||||||||||||||| |||||||| |||||||||||||| | |||||||||||||||||||| |||||||||||||| |
|
|
| T |
6323105 |
atattgagagtaacatgacacgagaattcttccttgtaagtttgacacttgaagatattccaaaccatggaaccatcaactttgtatgcaactcatggat |
6323006 |
T |
|
| Q |
243 |
ttacaatgctaaaaagtataaaacgaaacgcatcttctttacaaacaaggtaatg |
297 |
Q |
| |
|
||||| |||| | |||||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
6323005 |
ttacagtgctgacaagtataaaacgaaacgcatcttcttcgccaacaaggtaatg |
6322951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 375 - 620
Target Start/End: Complemental strand, 7460810 - 7460565
Alignment:
| Q |
375 |
tagacataccttccaagtgatacaccagctccattagtctactacagacaagaagaattgaagactttaagaggagatggaacgggtgagcgcaaagaat |
474 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |
|
|
| T |
7460810 |
tagacataccttccaagtgcaacaccagctccattagtgtactacagacaagaagaattgaagactttaagaggagatggaacgggagagcgcaaggaat |
7460711 |
T |
|
| Q |
475 |
cagataggatctatgactacgatgtttacaatgacttgggtgatcctgacaggaaagaaagcttgggtcgtcccgttgttggaggatccaataacttgcc |
574 |
Q |
| |
|
|| || || ||||| || ||||| |||||||||||||||||||| ||| ||||| ||||||| |||||| |||| ||||||| | |||||||| |
|
|
| T |
7460710 |
gggacagaatatatgattatgatgtctacaatgacttgggtgatcccgaccagaaagctagcttggctcgtcctgttgctggaggacctggaaacttgcc |
7460611 |
T |
|
| Q |
575 |
ttaccctcgaagggggagaaccggcaggaaacatgctaaaaaaggt |
620 |
Q |
| |
|
||||||||||||||| ||||||||||| |||| ||||||||||| |
|
|
| T |
7460610 |
ttaccctcgaaggggaagaaccggcagaaaaccatctaaaaaaggt |
7460565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 375 - 605
Target Start/End: Complemental strand, 6364611 - 6364381
Alignment:
| Q |
375 |
tagacataccttccaagtgatacaccagctccattagtctactacagacaagaagaattgaagactttaagaggagatggaacgggtgagcgcaaagaat |
474 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| || |||| |
|
|
| T |
6364611 |
tagacataccttccaagtgaaacaccagctcctttagtctactacagacaagaagaattgaagactttaagaggagatggaactggagagcgtaaggaat |
6364512 |
T |
|
| Q |
475 |
cagataggatctatgactacgatgtttacaatgacttgggtgatcctgacaggaaagaaagcttgggtcgtcccgttgttggaggatccaataacttgcc |
574 |
Q |
| |
|
|| || || ||||| || ||||| |||||||| ||||||||| |||| ||| | || |||| |||||| |||||||||||||| | | | | || |
|
|
| T |
6364511 |
gggaaagaatatatgattatgatgtctacaatgatttgggtgatgtggacaagaacgctagtttggctcgtcctgttgttggaggatctagcaccctccc |
6364412 |
T |
|
| Q |
575 |
ttaccctcgaagggggagaaccggcaggaaa |
605 |
Q |
| |
|
|||||||||||| |||||||||||||||||| |
|
|
| T |
6364411 |
ttaccctcgaagagggagaaccggcaggaaa |
6364381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 98 - 295
Target Start/End: Complemental strand, 7461168 - 7460971
Alignment:
| Q |
98 |
ttcattttgaatgggacagtgagatgggaactccaggagcattttatattgaaaatttcatgctaggagaattcttccttgtgagtttgacccttgaaga |
197 |
Q |
| |
|
|||||||| ||||||||||| ||||||| ||||||||| ||||||||||| || | |||| ||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
7461168 |
ttcattttcaatgggacagtaccatgggaattccaggagctttttatattgataactatatgcaaggtgaattcttccttgtgagtttgacacttgaaga |
7461069 |
T |
|
| Q |
198 |
tattcccattcatggaaccatcaactttgtttgcaactcatggatttacaatgctaaaaagtataaaacgaaacgcatcttctttacaaacaaggtaa |
295 |
Q |
| |
|
| |||| | |||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||| | |||||||||||| | |||||||||| |
|
|
| T |
7461068 |
tgttccaaaccatggaaccatcaactttgtttgcaactcatggattcacaattctaaaaagtacaaaacggaccgcatcttctttgccaacaaggtaa |
7460971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 98 - 295
Target Start/End: Complemental strand, 6354158 - 6353961
Alignment:
| Q |
98 |
ttcattttgaatgggacagtgagatgggaactccaggagcattttatattgaaaatttcatgctaggagaattcttccttgtgagtttgacccttgaaga |
197 |
Q |
| |
|
|||||||||||||||||||| | ||||||| ||| ||||| ||||| || || ||||| |||| ||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
6354158 |
ttcattttgaatgggacagtaacatgggaattcccggagctttttacatcgataattttatgcaaggtgaattcttccttgtgagtttgacacttgaaga |
6354059 |
T |
|
| Q |
198 |
tattcccattcatggaaccatcaactttgtttgcaactcatggatttacaatgctaaaaagtataaaacgaaacgcatcttctttacaaacaaggtaa |
295 |
Q |
| |
|
| |||| | |||||| ||||| ||||||| ||||||||||||||||||||| |||||||||| ||||| | |||||||||||| | |||||||||| |
|
|
| T |
6354058 |
tgttccaaaccatggatccatccactttgtctgcaactcatggatttacaattctaaaaagtacaaaaccgaccgcatcttctttgccaacaaggtaa |
6353961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 375 - 524
Target Start/End: Complemental strand, 6353738 - 6353589
Alignment:
| Q |
375 |
tagacataccttccaagtgatacaccagctccattagtctactacagacaagaagaattgaagactttaagaggagatggaacgggtgagcgcaaagaat |
474 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||| |
|
|
| T |
6353738 |
tagacataccttccaagtgaaacaccggctccattagtgtactacagacaagaagaattgaagactttaagaggagatggaactggagagcgcaaggaat |
6353639 |
T |
|
| Q |
475 |
cagataggatctatgactacgatgtttacaatgacttgggtgatcctgac |
524 |
Q |
| |
|
|| || || ||||| |||||||| |||||||| |||||||| |||||| |
|
|
| T |
6353638 |
gggaaagaatatatgattacgatgtctacaatgatttgggtgagcctgac |
6353589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 103 - 295
Target Start/End: Complemental strand, 6364911 - 6364716
Alignment:
| Q |
103 |
tttgaatgggacagtgagatgggaactccaggagcattttatattgaaaatttcatgctaggag---aattcttccttgtgagtttgacccttgaagata |
199 |
Q |
| |
|
||||||||||||| ||| ||||||||||||||||| ||||||||||| |||| ||| ||| | ||||||||||||| || ||||| ||||||||| |
|
|
| T |
6364911 |
tttgaatgggacaatgacatgggaactccaggagctttttatattgagaattatctgcaaggtggtgaattcttccttgtcagcttgactcttgaagatg |
6364812 |
T |
|
| Q |
200 |
ttcccattcatggaaccatcaactttgtttgcaactcatggatttacaatgctaaaaagtataaaacgaaacgcatcttctttacaaacaaggtaa |
295 |
Q |
| |
|
|||| | ||||||||||||||||||||||||||||||||| ||||||| |||||||| || ||||| |||||||| |||||| | |||||||||| |
|
|
| T |
6364811 |
ttccaaaccatggaaccatcaactttgtttgcaactcatgggtttacaacgctaaaaattacaaaactaaacgcattttctttgccaacaaggtaa |
6364716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 379 - 515
Target Start/End: Complemental strand, 6392230 - 6392094
Alignment:
| Q |
379 |
cataccttccaagtgatacaccagctccattagtctactacagacaagaagaattgaagactttaagaggagatggaacgggtgagcgcaaagaatcaga |
478 |
Q |
| |
|
||||||||| ||| || ||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||| || ||||| || |||| || |
|
|
| T |
6392230 |
cataccttctaagggaaacaccagctccattactgtactacagacaagaagaattgaatactttaagaggagatggaactggagagcgtaaggaatggga |
6392131 |
T |
|
| Q |
479 |
taggatctatgactacgatgtttacaatgacttgggt |
515 |
Q |
| |
|
|| || ||||| || ||||| |||||||| |||||| |
|
|
| T |
6392130 |
cagaatatatgattatgatgtctacaatgatttgggt |
6392094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 387 - 517
Target Start/End: Complemental strand, 6265057 - 6264927
Alignment:
| Q |
387 |
ccaagtgatacaccagctccattagtctactacagacaagaagaattgaagactttaagaggagatggaacgggtgagcgcaaagaatcagataggatct |
486 |
Q |
| |
|
|||||||| ||||| |||||| | |||||||| |||||| ||| ||||||||||||||||||||||||||||| ||||||||||||| || || | | |
|
|
| T |
6265057 |
ccaagtgaaacacctgctccacttgtctactatagacaattagagttgaagactttaagaggagatggaacgggggagcgcaaagaatgggacagagttt |
6264958 |
T |
|
| Q |
487 |
atgactacgatgtttacaatgacttgggtga |
517 |
Q |
| |
|
|||| || |||||||||||||| |||||||| |
|
|
| T |
6264957 |
atgattatgatgtttacaatgatttgggtga |
6264927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 121 - 297
Target Start/End: Complemental strand, 6392611 - 6392435
Alignment:
| Q |
121 |
atgggaactccaggagcattttatattgaaaatttcatgctaggagaattcttccttgtgagtttgacccttgaagatattcccattcatggaaccatca |
220 |
Q |
| |
|
||||||| ||||||||| || ||| || | ||||| | || || ||| ||||||||||||||||||||||||||||| || | |||| ||||| | |
|
|
| T |
6392611 |
atgggaattccaggagctttctatgttaagaattttacgcaagatgaaatcttccttgtgagtttgacccttgaagatgttgaaagccatgaaaccacaa |
6392512 |
T |
|
| Q |
221 |
actttgtttgcaactcatggatttacaatgctaaaaagtataaaacgaaacgcatcttctttacaaacaaggtaatg |
297 |
Q |
| |
|
||||| |||||||||||||||||||||||||| ||||||| |||| ||||||| |||||| | |||||||||||| |
|
|
| T |
6392511 |
actttatttgcaactcatggatttacaatgctgaaaagtaccaaactgaacgcattttctttgccaacaaggtaatg |
6392435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 121 - 297
Target Start/End: Complemental strand, 6411751 - 6411575
Alignment:
| Q |
121 |
atgggaactccaggagcattttatattgaaaatttcatgctaggagaattcttccttgtgagtttgacccttgaagatattcccattcatggaaccatca |
220 |
Q |
| |
|
||||||| ||||||||| || ||| || | ||||| | || || ||| ||||||||||||||||||||||||||||| || | |||| ||||| | |
|
|
| T |
6411751 |
atgggaattccaggagctttctatgttaagaattttacgcaagatgaaatcttccttgtgagtttgacccttgaagatgttgaaagccatgaaaccacaa |
6411652 |
T |
|
| Q |
221 |
actttgtttgcaactcatggatttacaatgctaaaaagtataaaacgaaacgcatcttctttacaaacaaggtaatg |
297 |
Q |
| |
|
||||| |||||||||||||||||||||||||| ||||||| |||| ||||||| |||||| | |||||||||||| |
|
|
| T |
6411651 |
actttatttgcaactcatggatttacaatgctgaaaagtaccaaactgaacgcattttctttgccaacaaggtaatg |
6411575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 379 - 515
Target Start/End: Complemental strand, 6411394 - 6411258
Alignment:
| Q |
379 |
cataccttccaagtgatacaccagctccattagtctactacagacaagaagaattgaagactttaagaggagatggaacgggtgagcgcaaagaatcaga |
478 |
Q |
| |
|
|||||||||||||| | ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| || ||||| || | || || |
|
|
| T |
6411394 |
cataccttccaagtcaagcaccacaaccattagtgtactacatcaaagaagaattgaagactttaagaggagatggaactggagagcgtaaggtatggga |
6411295 |
T |
|
| Q |
479 |
taggatctatgactacgatgtttacaatgacttgggt |
515 |
Q |
| |
|
|| || ||||| || ||||| |||||||| |||||| |
|
|
| T |
6411294 |
cagaatatatgattatgatgtctacaatgatttgggt |
6411258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 514
Target Start/End: Complemental strand, 6458392 - 6458262
Alignment:
| Q |
384 |
cttccaagtgatacaccagctccattagtctactacagacaagaagaattgaagactttaagaggagatggaacgggtgagcgcaaagaatcagatagga |
483 |
Q |
| |
|
||||||||| | ||||||||||||||| | || ||| ||||||| ||| ||||| |||||||||||||||| || |||||||||||| | ||||| |
|
|
| T |
6458392 |
cttccaagtcaaacaccagctccattaaatcattatagagaagaagagttgcagactctaagaggagatggaactggagagcgcaaagaagcggatagag |
6458293 |
T |
|
| Q |
484 |
tctatgactacgatgtttacaatgacttggg |
514 |
Q |
| |
|
| ||||| || ||| |||| ||||| ||||| |
|
|
| T |
6458292 |
tttatgattatgatatttataatgatttggg |
6458262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 173 - 257
Target Start/End: Complemental strand, 6265599 - 6265515
Alignment:
| Q |
173 |
tccttgtgagtttgacccttgaagatattcccattcatggaaccatcaactttgtttgcaactcatggatttacaatgctaaaaa |
257 |
Q |
| |
|
|||||||||||||||| ||||| ||||| || | ||||||||| |||||||||||||||| ||| |||||||||| ||||| |
|
|
| T |
6265599 |
tccttgtgagtttgactcttgatgatatcccaaacgttggaaccattcactttgtttgcaactcgtgggtttacaatgcgaaaaa |
6265515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 508
Target Start/End: Complemental strand, 6452299 - 6452175
Alignment:
| Q |
384 |
cttccaagtgatacaccagctccattagtctactacagacaagaagaattgaagactttaagaggagatggaacgggtgagcgcaaagaatcagatagga |
483 |
Q |
| |
|
||||||||| | ||||||||||||||| ||| ||| ||||||| ||| ||| | |||||||||||||||| || || |||||||||| ||||||| |
|
|
| T |
6452299 |
cttccaagtcaaacaccagctccattaaatcactttagagaagaagagttgcagaatctaagaggagatggaaccggagaacgcaaagaatgggatagga |
6452200 |
T |
|
| Q |
484 |
tctatgactacgatgtttacaatga |
508 |
Q |
| |
|
| || || || |||||||| ||||| |
|
|
| T |
6452199 |
tatacgattatgatgtttataatga |
6452175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 59; Significance: 1e-24; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 53 - 251
Target Start/End: Complemental strand, 42694935 - 42694737
Alignment:
| Q |
53 |
ttacctccataccaattttgggagcagggcaatctgcatttcatgttcattttgaatgggacagtgagatgggaactccaggagcattttatattgaaaa |
152 |
Q |
| |
|
|||| ||| |||||| ||||||||||| |||||||||||| | |||||||||||||||| ||| ||||||| ||| ||||||||||| || | || |
|
|
| T |
42694935 |
ttacttccttaccaacattgggagcaggacaatctgcatttaaaattcattttgaatgggatgatgacatgggaattcctggagcattttacatcaagaa |
42694836 |
T |
|
| Q |
153 |
tttcatgctaggagaattcttccttgtgagtttgacccttgaagatattcccattcatggaaccatcaactttgtttgcaactcatggatttacaatgc |
251 |
Q |
| |
|
|| |||| | || || ||||||||||||||||| |||||||| ||||| | |||||||| |||| ||||||| |||||||| |||||||| ||||| |
|
|
| T |
42694835 |
ctttatgcaaactgagtttttccttgtgagtttgactcttgaagacattccaaatcatggaagcatctactttgtatgcaactcctggatttataatgc |
42694737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 379 - 508
Target Start/End: Complemental strand, 42694526 - 42694397
Alignment:
| Q |
379 |
cataccttccaagtgatacaccagctccattagtctactacagacaagaagaattgaagactttaagaggagatggaacgggtgagcgcaaagaatcaga |
478 |
Q |
| |
|
|||| ||||| ||||| ||||| |||||||||||| | || ||| ||||||||||||| | |||||||||||||||||| || || |||||||||| || |
|
|
| T |
42694526 |
catatcttcctagtgaaacaccggctccattagtccattatagagaagaagaattgaacaatttaagaggagatggaacaggagaacgcaaagaatggga |
42694427 |
T |
|
| Q |
479 |
taggatctatgactacgatgtttacaatga |
508 |
Q |
| |
|
|| |||||||| || ||||| |||||||| |
|
|
| T |
42694426 |
aagaatctatgattatgatgtctacaatga |
42694397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 384 - 469
Target Start/End: Original strand, 42687136 - 42687221
Alignment:
| Q |
384 |
cttccaagtgatacaccagctccattagtctactacagacaagaagaattgaagactttaagaggagatggaacgggtgagcgcaa |
469 |
Q |
| |
|
||||||||||| |||||| ||||| ||||| | || ||| ||||||||||| | | |||||| ||||||||||| || |||||||| |
|
|
| T |
42687136 |
cttccaagtgaaacaccatctccactagtcaagtatagagaagaagaattgcaaaatttaaggggagatggaacaggagagcgcaa |
42687221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 376 - 454
Target Start/End: Original strand, 9603035 - 9603113
Alignment:
| Q |
376 |
agacataccttccaagtgatacaccagctccattagtctactacagacaagaagaattgaagactttaagaggagatgg |
454 |
Q |
| |
|
||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||| | | | ||||||||||||| |
|
|
| T |
9603035 |
agacatatcttccaagtcaaacaccagctccattagtctactacagacaagaagaattgcaaaatctaagaggagatgg |
9603113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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