View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3001_low_20 (Length: 394)

Name: NF3001_low_20
Description: NF3001
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3001_low_20
NF3001_low_20
[»] chr2 (71 HSPs)
chr2 (1-379)||(3323136-3323500)
chr2 (115-330)||(5789612-5789826)
chr2 (128-330)||(34120416-34120616)
chr2 (115-372)||(35313779-35314037)
chr2 (127-330)||(37322363-37322566)
chr2 (115-310)||(8947016-8947210)
chr2 (127-330)||(17695262-17695467)
chr2 (129-380)||(25637364-25637615)
chr2 (127-295)||(39691459-39691627)
chr2 (127-330)||(39785519-39785725)
chr2 (127-330)||(36794218-36794421)
chr2 (127-330)||(16463621-16463826)
chr2 (127-317)||(43115778-43115968)
chr2 (129-327)||(34225527-34225725)
chr2 (127-330)||(45235513-45235718)
chr2 (130-327)||(43410363-43410560)
chr2 (130-330)||(36354422-36354621)
chr2 (127-379)||(14523348-14523600)
chr2 (148-330)||(9458268-9458444)
chr2 (127-330)||(15359063-15359268)
chr2 (119-330)||(39329629-39329841)
chr2 (129-317)||(16805829-16806016)
chr2 (129-317)||(16845110-16845297)
chr2 (127-269)||(31448669-31448811)
chr2 (115-329)||(16377620-16377833)
chr2 (163-315)||(35242309-35242461)
chr2 (222-330)||(7494909-7495018)
chr2 (127-208)||(19937733-19937814)
chr2 (119-330)||(11742497-11742708)
chr2 (216-327)||(5272204-5272314)
chr2 (213-330)||(19937318-19937436)
chr2 (129-330)||(28186148-28186348)
chr2 (147-278)||(43699595-43699723)
chr2 (135-295)||(28170567-28170727)
chr2 (216-330)||(7438917-7439032)
chr2 (129-191)||(26607946-26608008)
chr2 (115-195)||(27501502-27501582)
chr2 (132-229)||(1206683-1206781)
chr2 (162-326)||(17346373-17346535)
chr2 (157-327)||(19426395-19426563)
chr2 (148-242)||(31976370-31976464)
chr2 (119-188)||(39443789-39443858)
chr2 (159-244)||(41220954-41221039)
chr2 (186-330)||(26608178-26608317)
chr2 (198-329)||(26863405-26863539)
chr2 (156-330)||(34451340-34451511)
chr2 (157-261)||(43730619-43730720)
chr2 (217-327)||(18202041-18202152)
chr2 (127-267)||(18853176-18853317)
chr2 (239-329)||(25904722-25904813)
chr2 (271-330)||(34120641-34120700)
chr2 (130-224)||(32783404-32783498)
chr2 (171-313)||(38187903-38188044)
chr2 (214-327)||(19444083-19444196)
chr2 (179-242)||(32831203-32831266)
chr2 (343-379)||(3601353-3601389)
chr2 (184-232)||(3601416-3601464)
chr2 (137-188)||(15435447-15435498)
chr2 (127-224)||(10005101-10005197)
chr2 (129-222)||(11367121-11367214)
chr2 (158-313)||(23492822-23492978)
chr2 (257-330)||(39443705-39443774)
chr2 (137-192)||(12520836-12520891)
chr2 (138-241)||(26337109-26337211)
chr2 (198-313)||(30996305-30996419)
chr2 (160-308)||(36173351-36173493)
chr2 (158-224)||(4411001-4411067)
chr2 (157-207)||(43730487-43730537)
chr2 (115-168)||(7438870-7438923)
chr2 (170-267)||(33406993-33407089)
chr2 (281-329)||(11366719-11366767)
[»] chr7 (80 HSPs)
chr7 (113-378)||(11373399-11373664)
chr7 (115-381)||(21350601-21350865)
chr7 (127-330)||(34947441-34947644)
chr7 (115-380)||(28103621-28103889)
chr7 (119-329)||(2459413-2459621)
chr7 (115-330)||(8592413-8592628)
chr7 (130-378)||(759079-759327)
chr7 (116-330)||(37245631-37245847)
chr7 (127-330)||(21759969-21760172)
chr7 (131-330)||(41506054-41506253)
chr7 (98-380)||(34100503-34100785)
chr7 (115-378)||(23670378-23670641)
chr7 (127-326)||(24516274-24516473)
chr7 (109-330)||(5524321-5524542)
chr7 (129-329)||(33819154-33819356)
chr7 (129-330)||(28202296-28202497)
chr7 (127-330)||(83325-83529)
chr7 (118-330)||(19271709-19271920)
chr7 (115-329)||(7457394-7457607)
chr7 (129-327)||(3178191-3178391)
chr7 (129-330)||(32346039-32346240)
chr7 (127-330)||(40076259-40076459)
chr7 (119-330)||(7463153-7463365)
chr7 (127-330)||(9785929-9786132)
chr7 (127-330)||(43873864-43874067)
chr7 (127-379)||(21390186-21390439)
chr7 (115-312)||(22738661-22738857)
chr7 (127-330)||(42935599-42935805)
chr7 (127-327)||(26973966-26974173)
chr7 (127-378)||(38391645-38391892)
chr7 (119-312)||(46478270-46478464)
chr7 (127-330)||(48608808-48609006)
chr7 (148-330)||(27920927-27921111)
chr7 (118-295)||(29835390-29835566)
chr7 (128-330)||(30865906-30866110)
chr7 (127-330)||(16904318-16904523)
chr7 (130-327)||(13961905-13962100)
chr7 (157-317)||(32018930-32019091)
chr7 (171-330)||(6494963-6495121)
chr7 (192-330)||(25571361-25571498)
chr7 (202-330)||(36790679-36790809)
chr7 (127-330)||(44424086-44424279)
chr7 (130-246)||(16560558-16560674)
chr7 (130-246)||(16604988-16605104)
chr7 (157-308)||(32018727-32018879)
chr7 (175-325)||(21937820-21937970)
chr7 (130-261)||(49101673-49101807)
chr7 (127-330)||(31930482-31930690)
chr7 (127-232)||(2850866-2850971)
chr7 (130-231)||(12631345-12631446)
chr7 (127-208)||(44180268-44180349)
chr7 (127-308)||(17828337-17828517)
chr7 (182-327)||(24166934-24167080)
chr7 (155-269)||(30546368-30546482)
chr7 (127-227)||(46211472-46211575)
chr7 (198-306)||(46602014-46602123)
chr7 (157-313)||(29121462-29121617)
chr7 (185-240)||(42796039-42796094)
chr7 (157-259)||(39005433-39005535)
chr7 (157-227)||(47045469-47045538)
chr7 (148-241)||(7930083-7930176)
chr7 (163-258)||(35333056-35333151)
chr7 (217-330)||(47045546-47045653)
chr7 (224-317)||(37490329-37490422)
chr7 (171-295)||(17610567-17610691)
chr7 (154-241)||(762187-762274)
chr7 (156-242)||(31665730-31665817)
chr7 (170-225)||(39452390-39452445)
chr7 (156-222)||(25531004-25531070)
chr7 (130-182)||(4958598-4958650)
chr7 (181-329)||(10042223-10042371)
chr7 (346-378)||(33819104-33819136)
chr7 (343-378)||(26973920-26973955)
chr7 (159-229)||(15464720-15464790)
chr7 (162-327)||(39519288-39519454)
chr7 (231-329)||(2851114-2851213)
chr7 (148-221)||(27556975-27557048)
chr7 (254-379)||(29835567-29835692)
chr7 (343-380)||(34947390-34947427)
chr7 (346-378)||(3178405-3178437)
[»] chr3 (79 HSPs)
chr3 (115-379)||(43253829-43254094)
chr3 (115-380)||(27471219-27471484)
chr3 (115-327)||(37311886-37312099)
chr3 (127-330)||(10366620-10366830)
chr3 (128-371)||(37772943-37773188)
chr3 (127-317)||(37695643-37695835)
chr3 (129-330)||(19822945-19823146)
chr3 (117-330)||(36460384-36460597)
chr3 (129-330)||(36476518-36476719)
chr3 (130-330)||(51837940-51838141)
chr3 (127-330)||(30190638-30190841)
chr3 (115-305)||(23004349-23004537)
chr3 (127-312)||(8679032-8679216)
chr3 (115-329)||(3313187-3313399)
chr3 (129-330)||(53560150-53560352)
chr3 (115-275)||(1778632-1778791)
chr3 (167-326)||(39043772-39043932)
chr3 (119-327)||(11905760-11905967)
chr3 (127-327)||(29023944-29024138)
chr3 (127-330)||(37497425-37497629)
chr3 (127-330)||(44301495-44301699)
chr3 (119-294)||(11632053-11632225)
chr3 (131-329)||(24569082-24569276)
chr3 (127-324)||(52290834-52291030)
chr3 (155-330)||(3901155-3901330)
chr3 (109-330)||(38795278-38795499)
chr3 (127-330)||(45710783-45710987)
chr3 (131-330)||(54726419-54726618)
chr3 (127-330)||(17652687-17652885)
chr3 (129-330)||(12736552-12736752)
chr3 (129-300)||(5322919-5323088)
chr3 (119-330)||(31158492-31158691)
chr3 (119-329)||(38137413-38137626)
chr3 (127-330)||(34957438-34957640)
chr3 (124-261)||(28690757-28690894)
chr3 (117-330)||(30711008-30711220)
chr3 (155-330)||(12904798-12904974)
chr3 (192-330)||(33491402-33491542)
chr3 (130-277)||(34750483-34750630)
chr3 (115-231)||(50035183-50035299)
chr3 (127-259)||(14194561-14194692)
chr3 (129-261)||(19611912-19612043)
chr3 (204-327)||(41038448-41038571)
chr3 (187-327)||(27549323-27549464)
chr3 (127-231)||(49830162-49830267)
chr3 (157-254)||(54477467-54477564)
chr3 (115-191)||(33491049-33491125)
chr3 (131-259)||(43719272-43719399)
chr3 (119-326)||(23068137-23068345)
chr3 (127-261)||(19609302-19609436)
chr3 (129-330)||(40462255-40462447)
chr3 (121-317)||(49447766-49447960)
chr3 (156-261)||(36462953-36463058)
chr3 (157-261)||(30682074-30682178)
chr3 (119-195)||(51064788-51064864)
chr3 (197-313)||(54225884-54225999)
chr3 (157-237)||(39931656-39931736)
chr3 (164-326)||(24245109-24245269)
chr3 (127-245)||(38512044-38512162)
chr3 (157-234)||(42278695-42278772)
chr3 (185-258)||(48541036-48541109)
chr3 (281-326)||(51065145-51065190)
chr3 (204-327)||(40194439-40194563)
chr3 (214-261)||(41351629-41351676)
chr3 (129-192)||(45811727-45811790)
chr3 (171-261)||(25108547-25108637)
chr3 (227-317)||(50036510-50036599)
chr3 (174-266)||(38705173-38705267)
chr3 (138-223)||(52206836-52206921)
chr3 (129-189)||(30861470-30861529)
chr3 (109-144)||(9196639-9196674)
chr3 (271-330)||(43715240-43715299)
chr3 (285-330)||(30710583-30710628)
chr3 (216-253)||(37804796-37804833)
chr3 (345-378)||(51065213-51065246)
chr3 (128-192)||(7757599-7757663)
chr3 (346-378)||(24569294-24569326)
chr3 (201-245)||(37804854-37804898)
chr3 (176-244)||(43870836-43870904)
[»] chr5 (60 HSPs)
chr5 (115-329)||(40530188-40530403)
chr5 (115-379)||(4818435-4818700)
chr5 (115-330)||(8698242-8698458)
chr5 (115-330)||(41496014-41496229)
chr5 (127-329)||(6753635-6753836)
chr5 (130-378)||(40899804-40900052)
chr5 (127-330)||(27542729-27542932)
chr5 (129-330)||(8724987-8725188)
chr5 (127-379)||(2232049-2232299)
chr5 (127-330)||(6315753-6315956)
chr5 (127-377)||(1248580-1248830)
chr5 (137-330)||(6615866-6616059)
chr5 (115-329)||(9515668-9515895)
chr5 (115-329)||(31654987-31655202)
chr5 (127-327)||(7827902-7828102)
chr5 (121-330)||(15818450-15818661)
chr5 (132-330)||(6753963-6754160)
chr5 (109-378)||(29570282-29570547)
chr5 (132-328)||(19929882-19930078)
chr5 (115-288)||(29374318-29374491)
chr5 (127-326)||(21060569-21060767)
chr5 (157-330)||(27580540-27580707)
chr5 (113-278)||(22848346-22848511)
chr5 (129-330)||(42803598-42803799)
chr5 (155-330)||(41062164-41062338)
chr5 (156-326)||(4440959-4441129)
chr5 (148-330)||(3348122-3348309)
chr5 (155-330)||(11796171-11796343)
chr5 (127-378)||(2588044-2588290)
chr5 (127-329)||(30512661-30512865)
chr5 (127-329)||(30553001-30553205)
chr5 (127-276)||(41478815-41478964)
chr5 (127-276)||(41492290-41492439)
chr5 (131-326)||(15439299-15439493)
chr5 (127-247)||(29856064-29856182)
chr5 (127-231)||(32440174-32440278)
chr5 (127-230)||(38508163-38508266)
chr5 (127-326)||(11904141-11904343)
chr5 (156-330)||(26285483-26285657)
chr5 (115-192)||(843509-843586)
chr5 (130-229)||(37184058-37184157)
chr5 (165-286)||(11761313-11761433)
chr5 (156-261)||(18841482-18841587)
chr5 (127-178)||(42922843-42922894)
chr5 (127-246)||(38161392-38161507)
chr5 (173-313)||(39213296-39213437)
chr5 (184-330)||(7330442-7330587)
chr5 (147-232)||(5731808-5731893)
chr5 (157-244)||(40616077-40616172)
chr5 (156-195)||(3076659-3076698)
chr5 (115-177)||(31747969-31748031)
chr5 (146-247)||(5129227-5129328)
chr5 (155-243)||(18890559-18890647)
chr5 (162-241)||(25494947-25495026)
chr5 (162-244)||(8493849-8493931)
chr5 (287-329)||(29374128-29374170)
chr5 (236-314)||(41478733-41478813)
chr5 (236-314)||(41480099-41480179)
chr5 (236-330)||(41492192-41492288)
chr5 (234-313)||(32439822-32439902)
[»] chr1 (99 HSPs)
chr1 (127-330)||(39864045-39864248)
chr1 (109-371)||(12038975-12039237)
chr1 (115-379)||(24991622-24991887)
chr1 (130-329)||(28748926-28749125)
chr1 (117-378)||(23168964-23169221)
chr1 (97-330)||(31042731-31042964)
chr1 (117-326)||(9307564-9307774)
chr1 (148-330)||(20209842-20210024)
chr1 (141-329)||(7759150-7759338)
chr1 (148-329)||(40144849-40145030)
chr1 (127-330)||(33733244-33733446)
chr1 (155-330)||(49223995-49224170)
chr1 (127-330)||(37506058-37506264)
chr1 (127-379)||(16395028-16395278)
chr1 (118-329)||(6023621-6023833)
chr1 (162-330)||(14757610-14757777)
chr1 (119-303)||(44707733-44707917)
chr1 (127-330)||(26093328-26093531)
chr1 (127-327)||(52429279-52429481)
chr1 (129-303)||(34031510-34031684)
chr1 (127-329)||(31978633-31978832)
chr1 (195-378)||(35367693-35367871)
chr1 (127-324)||(916967-917161)
chr1 (127-330)||(38787272-38787478)
chr1 (132-327)||(24880809-24881008)
chr1 (127-316)||(2572416-2572605)
chr1 (155-308)||(8896341-8896495)
chr1 (216-330)||(6785190-6785304)
chr1 (156-269)||(15699117-15699230)
chr1 (127-324)||(32825973-32826171)
chr1 (157-330)||(36701857-36702028)
chr1 (157-330)||(36717961-36718132)
chr1 (141-275)||(37276450-37276584)
chr1 (146-275)||(6160459-6160588)
chr1 (129-330)||(10495773-10495973)
chr1 (130-327)||(13579605-13579801)
chr1 (127-327)||(45331276-45331478)
chr1 (129-327)||(11449824-11450018)
chr1 (115-246)||(12151194-12151325)
chr1 (127-327)||(30754922-30755123)
chr1 (157-330)||(41121836-41122007)
chr1 (129-309)||(42409950-42410129)
chr1 (224-330)||(4659711-4659816)
chr1 (127-330)||(21909987-21910192)
chr1 (127-275)||(44761512-44761660)
chr1 (176-315)||(22856267-22856406)
chr1 (129-275)||(4441586-4441732)
chr1 (127-286)||(5179380-5179539)
chr1 (136-326)||(27896893-27897083)
chr1 (127-261)||(32970548-32970682)
chr1 (105-330)||(35682765-35682977)
chr1 (162-327)||(27721470-27721634)
chr1 (197-327)||(37539066-37539194)
chr1 (157-327)||(9379169-9379339)
chr1 (180-330)||(52837217-52837364)
chr1 (165-330)||(7351573-7351735)
chr1 (130-207)||(27687298-27687375)
chr1 (156-261)||(29074887-29074992)
chr1 (180-326)||(9412837-9412982)
chr1 (160-240)||(17988572-17988654)
chr1 (127-210)||(43500765-43500848)
chr1 (263-330)||(43500857-43500924)
chr1 (157-327)||(3260529-3260693)
chr1 (157-255)||(34688858-34688956)
chr1 (157-255)||(34693386-34693484)
chr1 (157-238)||(3312137-3312218)
chr1 (118-183)||(4659838-4659903)
chr1 (148-229)||(22181371-22181452)
chr1 (198-286)||(25089137-25089226)
chr1 (217-330)||(26256159-26256272)
chr1 (180-261)||(32219695-32219776)
chr1 (127-195)||(35367625-35367694)
chr1 (156-303)||(31154091-31154236)
chr1 (159-305)||(13365964-13366107)
chr1 (127-208)||(6267837-6267918)
chr1 (156-244)||(44426745-44426836)
chr1 (157-245)||(6365650-6365738)
chr1 (175-231)||(29778425-29778481)
chr1 (131-235)||(41080627-41080731)
chr1 (143-238)||(11642196-11642286)
chr1 (157-276)||(26257951-26258070)
chr1 (157-208)||(43614453-43614504)
chr1 (115-173)||(26252500-26252558)
chr1 (155-229)||(35538678-35538752)
chr1 (155-235)||(978866-978946)
chr1 (285-329)||(12151123-12151167)
chr1 (162-266)||(15057428-15057531)
chr1 (213-261)||(15904754-15904802)
chr1 (214-330)||(37177770-37177886)
chr1 (157-241)||(49176940-49177024)
chr1 (161-229)||(51028508-51028576)
chr1 (127-194)||(7439896-7439963)
chr1 (157-229)||(44122248-44122322)
chr1 (348-378)||(26252662-26252692)
chr1 (346-379)||(9307511-9307544)
chr1 (148-208)||(15444483-15444543)
chr1 (290-330)||(15699074-15699114)
chr1 (214-329)||(39887769-39887885)
chr1 (281-325)||(51028608-51028652)
[»] chr8 (80 HSPs)
chr8 (115-371)||(39482505-39482764)
chr8 (157-378)||(44761503-44761722)
chr8 (109-379)||(9300074-9300344)
chr8 (127-368)||(21216080-21216320)
chr8 (119-327)||(11976907-11977115)
chr8 (105-329)||(45425623-45425848)
chr8 (127-327)||(10179926-10180126)
chr8 (115-329)||(39405697-39405911)
chr8 (129-298)||(7172880-7173049)
chr8 (127-330)||(13335151-13335353)
chr8 (127-330)||(26626091-26626294)
chr8 (127-326)||(17719237-17719436)
chr8 (127-330)||(32476222-32476424)
chr8 (120-241)||(1875564-1875685)
chr8 (127-330)||(10097970-10098174)
chr8 (127-330)||(34948666-34948867)
chr8 (130-327)||(14854916-14855115)
chr8 (127-330)||(22771814-22772017)
chr8 (148-327)||(31231667-31231846)
chr8 (157-330)||(5053162-5053334)
chr8 (127-313)||(31270974-31271158)
chr8 (127-330)||(4428331-4428531)
chr8 (115-275)||(31082608-31082768)
chr8 (130-261)||(42972490-42972624)
chr8 (127-330)||(40996344-40996543)
chr8 (148-327)||(396611-396790)
chr8 (129-245)||(51132-51247)
chr8 (198-329)||(29226578-29226708)
chr8 (127-330)||(17823856-17824057)
chr8 (127-327)||(34393933-34394137)
chr8 (161-330)||(41091931-41092097)
chr8 (160-266)||(42886998-42887104)
chr8 (148-326)||(2767291-2767475)
chr8 (196-330)||(10953786-10953914)
chr8 (196-330)||(10961791-10961919)
chr8 (127-222)||(7703135-7703230)
chr8 (131-261)||(27294042-27294172)
chr8 (156-237)||(44648540-44648621)
chr8 (115-195)||(1739709-1739789)
chr8 (127-211)||(36967414-36967498)
chr8 (127-330)||(39300920-39301138)
chr8 (175-330)||(39466064-39466219)
chr8 (155-309)||(4924074-4924229)
chr8 (156-295)||(40028481-40028624)
chr8 (214-329)||(6796395-6796516)
chr8 (162-330)||(36006901-36007071)
chr8 (192-266)||(32678401-32678475)
chr8 (157-241)||(3117029-3117111)
chr8 (249-325)||(1875840-1875916)
chr8 (129-195)||(29226212-29226278)
chr8 (117-194)||(6611767-6611844)
chr8 (157-246)||(31331426-31331515)
chr8 (157-261)||(5356603-5356706)
chr8 (130-262)||(33765662-33765794)
chr8 (197-328)||(35732062-35732188)
chr8 (249-327)||(50753-50831)
chr8 (157-266)||(5878998-5879108)
chr8 (213-330)||(32631349-32631465)
chr8 (156-261)||(34057626-34057731)
chr8 (157-222)||(39890663-39890728)
chr8 (127-202)||(6796024-6796099)
chr8 (146-204)||(10953406-10953464)
chr8 (146-204)||(10961411-10961469)
chr8 (213-330)||(1739478-1739594)
chr8 (346-379)||(7172814-7172847)
chr8 (201-315)||(21649414-21649530)
chr8 (249-330)||(36967308-36967388)
chr8 (225-330)||(40109647-40109751)
chr8 (127-195)||(32678787-32678855)
chr8 (157-209)||(40109789-40109841)
chr8 (157-236)||(9839835-9839914)
chr8 (157-208)||(12559649-12559700)
chr8 (155-261)||(15809989-15810093)
chr8 (157-191)||(39329370-39329404)
chr8 (197-269)||(27976649-27976722)
chr8 (197-269)||(28033918-28033991)
chr8 (197-242)||(29806330-29806375)
chr8 (130-195)||(39329088-39329153)
chr8 (214-295)||(43719302-43719383)
chr8 (197-241)||(135716-135760)
[»] chr4 (103 HSPs)
chr4 (115-327)||(34360592-34360804)
chr4 (115-327)||(47464337-47464550)
chr4 (117-379)||(35311197-35311460)
chr4 (115-378)||(6643632-6643894)
chr4 (117-327)||(40122828-40123039)
chr4 (127-330)||(49175918-49176122)
chr4 (115-294)||(17237268-17237447)
chr4 (115-286)||(32884779-32884950)
chr4 (115-327)||(16821303-16821516)
chr4 (115-330)||(7061636-7061851)
chr4 (127-330)||(47773003-47773206)
chr4 (131-330)||(52859787-52859981)
chr4 (127-330)||(33790715-33790920)
chr4 (146-378)||(35380336-35380569)
chr4 (130-330)||(11907586-11907786)
chr4 (127-330)||(38405086-38405290)
chr4 (127-379)||(49428326-49428577)
chr4 (115-330)||(22129976-22130196)
chr4 (105-327)||(44536158-44536381)
chr4 (127-330)||(42616887-42617090)
chr4 (115-329)||(49746895-49747109)
chr4 (127-330)||(2066725-2066926)
chr4 (127-327)||(52247412-52247611)
chr4 (115-292)||(2942617-2942793)
chr4 (127-330)||(5841411-5841615)
chr4 (129-327)||(2653357-2653553)
chr4 (157-330)||(36985720-36985893)
chr4 (115-317)||(43237188-43237392)
chr4 (127-327)||(17114377-17114577)
chr4 (115-330)||(38663420-38663631)
chr4 (117-261)||(53346762-53346906)
chr4 (147-380)||(21240708-21240937)
chr4 (163-330)||(26147635-26147805)
chr4 (128-330)||(28500876-28501072)
chr4 (115-327)||(46396855-46397055)
chr4 (127-327)||(6609694-6609898)
chr4 (124-326)||(19265744-19265948)
chr4 (118-290)||(47358924-47359095)
chr4 (204-330)||(51624720-51624846)
chr4 (115-330)||(4972507-4972709)
chr4 (127-301)||(3689525-3689699)
chr4 (127-261)||(11288614-11288747)
chr4 (130-275)||(461947-462092)
chr4 (157-330)||(25233116-25233288)
chr4 (127-326)||(30682180-30682380)
chr4 (127-211)||(51625136-51625220)
chr4 (127-327)||(54506725-54506925)
chr4 (146-327)||(53412044-53412226)
chr4 (165-286)||(50264102-50264223)
chr4 (131-327)||(42517626-42517830)
chr4 (127-330)||(49579162-49579363)
chr4 (127-266)||(38502466-38502605)
chr4 (129-330)||(41711442-41711644)
chr4 (148-313)||(23915435-23915599)
chr4 (129-326)||(35998750-35998946)
chr4 (129-229)||(32469934-32470034)
chr4 (119-266)||(18741450-18741597)
chr4 (115-229)||(52869107-52869221)
chr4 (253-327)||(54921803-54921877)
chr4 (129-222)||(8175566-8175659)
chr4 (129-242)||(30192227-30192340)
chr4 (127-329)||(5618483-5618679)
chr4 (214-330)||(10754308-10754423)
chr4 (214-330)||(10968077-10968192)
chr4 (113-225)||(27880212-27880323)
chr4 (164-326)||(7986914-7987074)
chr4 (117-275)||(39397333-39397491)
chr4 (156-261)||(20612184-20612289)
chr4 (109-229)||(29575143-29575263)
chr4 (129-294)||(18532149-18532314)
chr4 (146-242)||(39157876-39157973)
chr4 (157-261)||(48914157-48914266)
chr4 (147-222)||(34321715-34321788)
chr4 (127-326)||(35251837-35252026)
chr4 (157-242)||(16506248-16506332)
chr4 (151-327)||(17512347-17512524)
chr4 (158-278)||(43902237-43902360)
chr4 (156-240)||(7270452-7270540)
chr4 (236-327)||(28911249-28911340)
chr4 (127-178)||(50263916-50263967)
chr4 (157-203)||(21325178-21325224)
chr4 (155-201)||(25869856-25869902)
chr4 (281-327)||(29295163-29295209)
chr4 (213-266)||(30261002-30261055)
chr4 (216-313)||(31370373-31370469)
chr4 (192-261)||(44526382-44526451)
chr4 (222-290)||(37836189-37836257)
chr4 (198-261)||(2400781-2400844)
chr4 (279-330)||(3098416-3098467)
chr4 (127-178)||(3669965-3670016)
chr4 (150-241)||(11024897-11024988)
chr4 (170-225)||(29295253-29295307)
chr4 (346-380)||(47464570-47464604)
chr4 (156-225)||(3098757-3098826)
chr4 (162-195)||(10672935-10672968)
chr4 (162-195)||(10699174-10699207)
chr4 (162-195)||(10754693-10754726)
chr4 (162-195)||(10886575-10886608)
chr4 (162-195)||(10912944-10912977)
chr4 (162-195)||(10968462-10968495)
chr4 (157-194)||(26885504-26885541)
chr4 (213-301)||(4739435-4739523)
chr4 (155-258)||(13016643-13016746)
[»] scaffold0159 (1 HSPs)
scaffold0159 (115-330)||(33985-34199)
[»] chr6 (59 HSPs)
chr6 (127-330)||(11655923-11656127)
chr6 (115-330)||(31894175-31894387)
chr6 (115-330)||(1781739-1781951)
chr6 (115-378)||(3720206-3720469)
chr6 (118-327)||(15058055-15058263)
chr6 (115-330)||(181491-181704)
chr6 (115-330)||(23142602-23142816)
chr6 (127-378)||(29363190-29363443)
chr6 (127-330)||(1063580-1063782)
chr6 (127-330)||(6801864-6802068)
chr6 (131-330)||(5302285-5302484)
chr6 (129-330)||(21010105-21010312)
chr6 (127-378)||(32440622-32440875)
chr6 (130-326)||(13909361-13909558)
chr6 (157-330)||(24983456-24983627)
chr6 (128-330)||(7920175-7920374)
chr6 (127-327)||(3291745-3291945)
chr6 (148-330)||(30716833-30717016)
chr6 (161-330)||(11143597-11143766)
chr6 (146-266)||(13087528-13087648)
chr6 (198-330)||(34657610-34657745)
chr6 (158-327)||(15582222-15582389)
chr6 (150-317)||(1955979-1956146)
chr6 (130-327)||(6834349-6834545)
chr6 (167-327)||(34299931-34300092)
chr6 (146-329)||(23397617-23397796)
chr6 (156-317)||(17835333-17835492)
chr6 (157-275)||(1225037-1225154)
chr6 (185-303)||(8695006-8695124)
chr6 (127-225)||(27448133-27448231)
chr6 (127-204)||(7072220-7072297)
chr6 (228-329)||(21425635-21425738)
chr6 (249-330)||(27367524-27367607)
chr6 (249-330)||(27457871-27457954)
chr6 (136-234)||(21804515-21804612)
chr6 (115-196)||(34639417-34639498)
chr6 (137-216)||(27367423-27367502)
chr6 (137-216)||(27457770-27457849)
chr6 (157-255)||(17828949-17829047)
chr6 (251-330)||(21478194-21478275)
chr6 (143-220)||(2423662-2423739)
chr6 (180-241)||(8115068-8115129)
chr6 (216-277)||(15046111-15046171)
chr6 (170-239)||(28101379-28101448)
chr6 (157-261)||(22398416-22398519)
chr6 (234-329)||(28106013-28106105)
chr6 (214-269)||(13206896-13206951)
chr6 (146-208)||(4581977-4582039)
chr6 (159-236)||(1671715-1671792)
chr6 (109-246)||(16431038-16431174)
chr6 (285-330)||(27367234-27367279)
chr6 (285-330)||(27457581-27457626)
chr6 (192-268)||(4367295-4367371)
chr6 (162-208)||(4590610-4590656)
chr6 (162-195)||(16406798-16406831)
chr6 (242-330)||(12307687-12307774)
chr6 (198-242)||(21425397-21425440)
chr6 (171-255)||(29444950-29445034)
chr6 (151-275)||(33510129-33510251)
[»] scaffold0294 (1 HSPs)
scaffold0294 (100-330)||(16973-17199)
[»] scaffold0095 (2 HSPs)
scaffold0095 (115-329)||(50139-50353)
scaffold0095 (175-330)||(22282-22437)
[»] scaffold1809 (1 HSPs)
scaffold1809 (162-381)||(697-912)
[»] scaffold0012 (1 HSPs)
scaffold0012 (128-286)||(105662-105820)
[»] scaffold0330 (1 HSPs)
scaffold0330 (127-330)||(5326-5527)
[»] scaffold0328 (1 HSPs)
scaffold0328 (127-330)||(7959-8163)
[»] scaffold0018 (1 HSPs)
scaffold0018 (115-329)||(136003-136218)
[»] scaffold0302 (1 HSPs)
scaffold0302 (115-267)||(16095-16247)
[»] scaffold0583 (1 HSPs)
scaffold0583 (127-327)||(1963-2162)
[»] scaffold0110 (2 HSPs)
scaffold0110 (127-288)||(1680-1841)
scaffold0110 (346-379)||(1441-1474)
[»] scaffold0182 (1 HSPs)
scaffold0182 (130-295)||(20334-20500)
[»] scaffold0003 (3 HSPs)
scaffold0003 (192-330)||(252848-252984)
scaffold0003 (127-225)||(39127-39225)
scaffold0003 (127-195)||(252507-252575)
[»] scaffold0016 (1 HSPs)
scaffold0016 (228-327)||(76229-76328)
[»] scaffold1391 (1 HSPs)
scaffold1391 (130-229)||(1798-1897)
[»] scaffold0188 (1 HSPs)
scaffold0188 (129-208)||(6793-6872)
[»] scaffold0470 (1 HSPs)
scaffold0470 (117-194)||(1055-1132)
[»] scaffold0011 (1 HSPs)
scaffold0011 (156-287)||(14177-14306)
[»] scaffold0464 (2 HSPs)
scaffold0464 (127-205)||(6263-6341)
scaffold0464 (212-330)||(5979-6090)
[»] scaffold2146 (1 HSPs)
scaffold2146 (175-244)||(425-494)
[»] scaffold0001 (1 HSPs)
scaffold0001 (157-202)||(143892-143937)
[»] scaffold0024 (1 HSPs)
scaffold0024 (115-153)||(84379-84417)
[»] scaffold0015 (1 HSPs)
scaffold0015 (175-329)||(42813-42966)
[»] scaffold0279 (1 HSPs)
scaffold0279 (148-221)||(12041-12114)


Alignment Details
Target: chr2 (Bit Score: 248; Significance: 1e-137; HSPs: 71)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 1 - 379
Target Start/End: Original strand, 3323136 - 3323500
Alignment:
Q  1 cctactttgtattgagaataatctcaatcaaatatggattgaatgggtaaacaacatttgatgaaaagactgaaatccatgttggtccaattatctttta 100  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3323136 cctactttgtattgagaataatctcaatcaaatatggtctgaatgggtaaacaacatttgatgaaaagactgaaatccatgttggtccaattacctttta 3323235  T
Q  101 ttattccttccatttcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatt 200  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||         
T  3323236 ttattccttccatttcacaatattagtcgtttaaggtttgtgcacgattattataaaaatgattaattgtgttgatttcaatggtaaaattagta----- 3323330  T
Q  201 tactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgca 300  Q
             ||| |||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3323331 ---------acatttattaattgtagttagtggagtagttaagttggatgaaattcaataagtaagagtgtaatagtgggaaaaaataataaatgctgca 3323421  T
Q  301 ttggtattgtaaagtgagaattattttgagnnnnnnnnnnnntgctaaagagacaataattgtgagacggagggagtat 379  Q
    ||||||||||||||||||||||||||||||            ||||||||||||||||||| ||||||| |||||||||    
T  3323422 ttggtattgtaaagtgagaattattttgagaaaaagaaaaaatgctaaagagacaataattatgagacgaagggagtat 3323500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 115 - 330
Target Start/End: Original strand, 5789612 - 5789826
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| || ||||||||||||||| |||||||| | |||||||||||||| |||| |||||| ||||||||||| |||||||||||||||| ||    
T  5789612 tcacaatattagtcatttaaggtttgtgcacgattattaaggaaatgattaattgtattgaattcaatagtaaaattagtggcatttactaaaacaccct 5789711  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaag 314  Q
    |||||||||||||||||| | |||||||||||  ||||||||||||| ||| ||| ||||||| ||||||||||||||||| ||||||| ||||||||||    
T  5789712 tattaattgtagttagtgaaatagttaagttggatgaaattcaataaataatggtataatagt-ggaaaaaataataaatgatgcattgatattgtaaag 5789810  T
Q  315 tgagaattattttgag 330  Q
    ||| ||||||||||||    
T  5789811 tgacaattattttgag 5789826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 128 - 330
Target Start/End: Original strand, 34120416 - 34120616
Alignment:
Q  128 cgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagt 227  Q
    ||||||| |||| ||||||||||||| ||||||||||||||||||||||||  ||||||||| |||||  ||||||||||| |   ||||||||||||||    
T  34120416 cgtttaaagtttatgcatgattattaagaaaatgattaattgtgttgattttgatggtaaaactagtattatttactaaaatat--ttattaattgtagt 34120513  T
Q  228 tagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
    ||||||| |||||||||||  |||||||||||||||||| || ||||| ||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  34120514 tagtggaatagttaagttggatgaaattcaataagtaagagtataataatggaaaaaaataataaatgctgcattggtattttaaagtgacaattatttt 34120613  T
Q  328 gag 330  Q
    |||    
T  34120614 gag 34120616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 115 - 372
Target Start/End: Complemental strand, 35314037 - 35313779
Alignment:
Q  115 tcacaatattactcgtttaaggtttg-tgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacac 213  Q
    ||||||||||| ||||||||   ||| |||| |||||||| | |||||||||||||||||||||||||||||||||||||||| ||||| |||| ||  |    
T  35314037 tcacaatattagtcgtttaaatattgatgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagtatttattaaagcaacc 35313938  T
Q  214 ttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaa 313  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||| |||| || ||||||||| ||||| ||||||||| ||||||  |||||||||    
T  35313937 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggaaaaaagtaataaatgttgcattattattgtaaa 35313838  T
Q  314 gtgagaattattttgagnnnnnnnnnnnntgctaaagagacaataattgtgagacggag 372  Q
    |||| ||||||||||||            || |||||||||||||||||||||||||||    
T  35313837 gtgacaattattttgagaaaaagaaaaaatgttaaagagacaataattgtgagacggag 35313779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 37322566 - 37322363
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatg-aaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgta 225  Q
    ||||||||||||| |||| |||||||| | ||||||||| ||||||||||||||||||||||||||| || |||||| ||||| || |||||||||||||    
T  37322566 tcgtttaaggtttatgcacgattattaaggaaaatgattgattgtgttgatttcaatggtaaaattaatatcatttattaaaatacccttattaattgta 37322467  T
Q  226 gttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattatt 325  Q
    ||||||||||||||||||||   ||||||||||||| ||||||| ||||| | ||||||||||||||||||| ||| |||||| |||||||| |||||||    
T  37322466 gttagtggagtagttaagttagatgaaattcaataaataagggtataataat-ggaaaaaataataaatgctacataggtattctaaagtgacaattatt 37322368  T
Q  326 ttgag 330  Q
    |||||    
T  37322367 ttgag 37322363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 115 - 310
Target Start/End: Original strand, 8947016 - 8947210
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| |||||||| |||||||||| ||||||| | ||||||||||||||||||||||||||| |||||||||||  |||||||||||||  ||    
T  8947016 tcacaatattaatcgtttaaagtttgtgcataattattaaggaaatgattaattgtgttgatttcaatgataaaattagtaatatttactaaaacatcct 8947115  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgt 310  Q
    |||||||| |||||||||||||||||||||||  ||||||||||||| ||||||| ||||| | | ||||||||||||||  ||||||||||||||    
T  8947116 tattaattatagttagtggagtagttaagttggatgaaattcaataaataagggtataataat-gaaaaaaataataaatattgcattggtattgt 8947210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 17695467 - 17695262
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||||||||||||| |||||||| | |||||||||||||| ||||||||||||||||||||  || ||||||| |||| |  |||||||||| |||    
T  17695467 tcgtttaaggtttgtgcacgattattaaggaaatgattaattgtattgatttcaatggtaaaattgatatcatttacaaaaatattcttattaattatag 17695368  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaa--aataataaatgctgcattggtattgtaaagtgagaattat 324  Q
    ||||| ||||||||||||||  ||||||||||||| ||||||| ||||||||| ||||  ||||||||||||||||||| |||| |||||||| ||||||    
T  17695367 ttagtagagtagttaagttggatgaaattcaataaataagggtataatagtggaaaaaataataataaatgctgcattgatattctaaagtgacaattat 17695268  T
Q  325 tttgag 330  Q
    ||||||    
T  17695267 tttgag 17695262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 129 - 380
Target Start/End: Complemental strand, 25637615 - 25637364
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    ||||||||||| |||| |||||| | |||| |||||||||||||||||||  ||||||||||||||  |||||||||||||||  |||||||||||||||    
T  25637615 gtttaaggtttatgcacgattataaggaaa-tgattaattgtgttgattttgatggtaaaattagtgtcatttactaaaacacctttattaattgtagtt 25637517  T
Q  229 agtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgg-gaaaaaataataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
    |  |||||||||||||||  ||||||| ||||| ||||||||||||| |||  |||||||||||||||||||||||||||| |||||||| |||||||||    
T  25637516 ataggagtagttaagttggatgaaatttaataaataagggtgtaataatggaaaaaaaataataaatgctgcattggtattctaaagtgacaattatttt 25637417  T
Q  328 gagnnnnnnnnnnnntgctaaagagacaataattgtgagacggagggagtata 380  Q
    |||            || |||||||||||| ||||||||||| ||||||||||    
T  25637416 gagaaaaagtaaaaatggtaaagagacaattattgtgagacgaagggagtata 25637364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 127 - 295
Target Start/End: Complemental strand, 39691627 - 39691459
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| || |||||||||||| || ||||||||||| ||    
T  39691627 tcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatgataaaattaatatcatttactaaaatactcttattaattgcag 39691528  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatg 295  Q
    ||||||||||||| ||||||| ||||||||||||| ||||||| ||||| ||| ||| |||||||||||    
T  39691527 ttagtggagtagtaaagttgaatgaaattcaataaataagggtataataatggaaaataataataaatg 39691459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 39785725 - 39785519
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtag---catttactaaaacacacttattaattg 223  Q
    ||||||||||||  |||| | |||||| | ||||||||||||||||||||||  |||||||||||||||    ||||||||||||||| |||||||||||    
T  39785725 tcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtactatcatttactaaaacactcttattaattg 39785626  T
Q  224 tagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaatta 323  Q
    |||||| ||||||||||||||||  |||| |||||||| ||||||| | ||| |||||||||||| ||||||||||||||||||| |||||||| |||||    
T  39785625 tagttaatggagtagttaagttggatgaagttcaataaataagggtattataatgggaaaaaatagtaaatgctgcattggtattctaaagtgacaatta 39785526  T
Q  324 ttttgag 330  Q
    |||||||    
T  39785525 ttttgag 39785519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 36794421 - 36794218
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||| ||  |||||| |||||| | ||||||||||||||||||||||  ||||||||||||||| | ||||||||||| | |||||||| |||||    
T  36794421 tcgtttaagattgatgcatggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcttttactaaaacgcccttattaactgtag 36794322  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||||||||||||||||||||  |||| |||||||| ||||||| | ||| ||  |||||||||||||||||||||||||||| |||||||| ||||||||    
T  36794321 ttagtggagtagttaagttggatgaagttcaataaataagggtattataatgaaaaaaaataataaatgctgcattggtattttaaagtgataattattt 36794222  T
Q  327 tgag 330  Q
    ||||    
T  36794221 tgag 36794218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 16463826 - 16463621
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||| |||| | |||||| | ||||||||||||||||||||||  ||||||||||||||| ||||||||||||||| ||||||||||||||    
T  16463826 tcgtttaaggtttatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtag 16463727  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaa--aataataaatgctgcattggtattgtaaagtgagaattat 324  Q
    ||||||||||||| |||||   ||||||| ||||| ||| |||  |||| ||| ||||  |||||||||||||||||||||||| |||||||| ||||||    
T  16463726 ttagtggagtagtaaagtttgatgaaatttaataaataatggtaaaataatggaaaaaataataataaatgctgcattggtattctaaagtgacaattat 16463627  T
Q  325 tttgag 330  Q
    ||||||    
T  16463626 tttgag 16463621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 127 - 317
Target Start/End: Original strand, 43115778 - 43115968
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||| ||||||||  ||||||||   ||||||||||||||||||||||||||| |||| ||||||||||||||||||| || |||||| |||||||    
T  43115778 tcgtttaaagtttgtgcgcgattattaaagaaatgattaattgtgttgatttcaatgataaagttagtagcatttactaaaatactcttatttattgtag 43115877  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtga 317  Q
    ||||||||||||||||||||| ||||||||||  | ||| ||| ||||| ||| ||||||||||||||||| ||||| |||||||||||||    
T  43115878 ttagtggagtagttaagttgaatgaaattcaacgaataatggtataataatggaaaaaaataataaatgctacattgatattgtaaagtga 43115968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 129 - 327
Target Start/End: Complemental strand, 34225725 - 34225527
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    |||||||||||||||| |||||||| | |||||| ||||| | ||||||| ||||||||| ||||||  |||||||||||||| ||||||||||||||||    
T  34225725 gtttaaggtttgtgcacgattattaaggaaatgaataattatattgattttaatggtaaacttagtattatttactaaaacacccttattaattgtagtt 34225626  T
Q  229 agtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
    | ||||||| ||||||||| ||||||| ||||| ||||||| ||||| ||  |||||||||||||| |||||||||||||  ||||||| |||||||||    
T  34225625 aatggagtatttaagttgaatgaaatttaataaataagggtataataatgaaaaaaaataataaatactgcattggtattccaaagtgacaattatttt 34225527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 45235718 - 45235513
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||||||||||||| |||||||| | |||||||| ||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||    
T  45235718 tcgtttaaggtttgtgcacgattattaaggaaatgattgattgtgttgatttcaatggtaaaattaatatcatttactaaaacacccttattaattgtag 45235619  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaa--aataataaatgctgcattggtattgtaaagtgagaattat 324  Q
    ||| || | ||||||||||   ||||||||||||| ||||| | || || ||  ||||  ||||||||||| |||||||||||| |||||||| ||||||    
T  45235618 ttaatgaaatagttaagtttgatgaaattcaataaataaggatatagtaatgaaaaaaataataataaatgttgcattggtattataaagtgacaattat 45235519  T
Q  325 tttgag 330  Q
    ||||||    
T  45235518 tttgag 45235513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 130 - 327
Target Start/End: Complemental strand, 43410560 - 43410363
Alignment:
Q  130 tttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtta 229  Q
    ||||| ||||||||| |||||||| | |||| ||||||||||||||| |||||| |||||||| || |||||||||||| |  |||||||||||||||||    
T  43410560 tttaatgtttgtgcacgattattaaggaaattattaattgtgttgatatcaatgataaaattaatatcatttactaaaatatccttattaattgtagtta 43410461  T
Q  230 gtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
     ||||||||||||||||| ||||||||||||| | || || ||||| ||| ||||||||||||||| |||||| ||||| |||||||| |||||||||    
T  43410460 atggagtagttaagttgaatgaaattcaataaatgagagtataataatggaaaaaaataataaatgttgcattagtattctaaagtgacaattatttt 43410363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 130 - 330
Target Start/End: Original strand, 36354422 - 36354621
Alignment:
Q  130 tttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtta 229  Q
    |||||||||| || | |||||||| | |||||| || ||||||||||||  |||||||||||||||  ||||| | |||||| |||||||||||||||||    
T  36354422 tttaaggtttatgtacgattattaaggaaatgactagttgtgttgattttgatggtaaaattagtattatttattgaaacactcttattaattgtagtta 36354521  T
Q  230 gtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttga 329  Q
    |||||||||||||||||  ||||||||||||| ||| ||| ||||| | |||||||||||||||| ||||||||||||| |||||||| |||||||||||    
T  36354522 gtggagtagttaagttggatgaaattcaataaataatggtataataat-ggaaaaaataataaattctgcattggtattctaaagtgacaattattttga 36354620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 127 - 379
Target Start/End: Original strand, 14523348 - 14523600
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||| |||| |||| | |||||| | ||||||||  |||||||||||||||||||||||||| || |||||||||||| |  ||||||||||||||    
T  14523348 tcgtttaaagtttatgcaaggttattaaggaaatgattttttgtgttgatttcaatggtaaaattaatatcatttactaaaatatccttattaattgtag 14523447  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    |||||||||||||||||||   ||||||||||| | ||||| | ||||| ||| ||| ||||||||||| ||||||| |||| |||||||| ||||||||    
T  14523448 ttagtggagtagttaagttagatgaaattcaattaataaggatataataatggaaaataataataaatgttgcattgatattctaaagtgacaattattt 14523547  T
Q  327 tgagnnnnnnnnnnnntgctaaagagacaataattgtgagacggagggagtat 379  Q
    ||||            || |||||||||||| ||| |||||||||||||||||    
T  14523548 tgagaaaaagaaaaagtgttaaagagacaattattatgagacggagggagtat 14523600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 148 - 330
Target Start/End: Original strand, 9458268 - 9458444
Alignment:
Q  148 ttattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttga 247  Q
    |||||| |||||| |||||||||||||||||  ||||||||||||||      || |||||||| ||||||||||||||||||||||||||| ||||||     
T  9458268 ttattaagaaaataattaattgtgttgattttgatggtaaaattagtg-----tattaaaacacccttattaattgtagttagtggagtagtaaagttgg 9458362  T
Q  248 ctgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
     ||||||| ||||| ||||||| ||||| | |||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  9458363 atgaaatttaataaataagggtataataat-ggaaaaaataataaatgctgcattggtattctaaagtgacaattattttgag 9458444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 127 - 330
Target Start/End: Original strand, 15359063 - 15359268
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||  |||| | |||||| ||| ||||||||||||||||||||  ||| |||||||| || ||||||||||||||| ||||||||||||||    
T  15359063 tcgtttaaggttgatgcacggttattaagaagatgattaattgtgttgattttgatgataaaattaatatcatttactaaaacacccttattaattgtag 15359162  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaa--aataataaatgctgcattggtattgtaaagtgagaattat 324  Q
    ||||||||||||||||||||  |||| |||||||| ||||||| | ||| ||  ||||  | |||||||| |||||||| |||| |||||| | ||||||    
T  15359163 ttagtggagtagttaagttggatgaagttcaataaataagggtattataatgaaaaaaatactaataaatactgcattgatattctaaagtaacaattat 15359262  T
Q  325 tttgag 330  Q
    ||||||    
T  15359263 tttgag 15359268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 119 - 330
Target Start/End: Original strand, 39329629 - 39329841
Alignment:
Q  119 aatattactcgtttaaggttt-gtgcatgattattatgaaaatgattaattgtgt--tgatttcaatggtaaaattagtagcatttactaaaacacactt 215  Q
    ||||||| |||||||| |||| ||||| ||||  || ||||||||| ||||||||  ||||||||||| |||||||| |||||||||||||||||| |||    
T  39329629 aatattagtcgtttaacgttttgtgcacgatttctaagaaaatgatcaattgtgtattgatttcaatgataaaattaatagcatttactaaaacactctt 39329728  T
Q  216 attaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagt 315  Q
    |||||||||||||| |||||||||||| |||  ||||||||||||| ||| | |  |||||| ||||||||||||||||||| ||||||||| |||||      
T  39329729 attaattgtagtta-tggagtagttaaattggatgaaattcaataaataacgatacaatagt-ggaaaaaataataaatgctacattggtatcgtaaaac 39329826  T
Q  316 gagaattattttgag 330  Q
     | ||||||||||||    
T  39329827 aacaattattttgag 39329841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 129 - 317
Target Start/End: Complemental strand, 16806016 - 16805829
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    |||||||||||||||| ||||||||   |||||||||||||||||||||| ||| |||||||||||| |||||||||||| |  ||||||||||||||||    
T  16806016 gtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgattttaatagtaaaattagtatcatttactaaaatatccttattaattgtagtt 16805917  T
Q  229 agtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtga 317  Q
    |||||||| |||||||||  | ||||| ||||  ||||||  ||||| ||  |||| |||||||||| ||||||| |||| ||||||||    
T  16805916 agtggagttgttaagttggattaaatttaatagataaggg-ataataatgaaaaaagataataaatgatgcattgatattctaaagtga 16805829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 129 - 317
Target Start/End: Complemental strand, 16845297 - 16845110
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    |||||||||||||||| ||||||||   |||||||||||||||||||||| ||| |||||||||||| |||||||||||| |  ||||||||||||||||    
T  16845297 gtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgattttaatagtaaaattagtatcatttactaaaatatccttattaattgtagtt 16845198  T
Q  229 agtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtga 317  Q
    |||||||| |||||||||  | ||||| ||||  ||||||  ||||| ||  |||| |||||||||| ||||||| |||| ||||||||    
T  16845197 agtggagttgttaagttggattaaatttaatagataaggg-ataataatgaaaaaagataataaatgatgcattgatattctaaagtga 16845110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 127 - 269
Target Start/End: Original strand, 31448669 - 31448811
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||||||||||||| |||||||| | ||||||||||||||||||||||  |||||||||||||   ||||||||||||||| |||| |||||| ||    
T  31448669 tcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattagagtcatttactaaaacacccttactaattgcag 31448768  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggt 269  Q
    |||||| | |||||||||||  ||||||||||||| |||||||    
T  31448769 ttagtgaaatagttaagttggatgaaattcaataaataagggt 31448811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 115 - 329
Target Start/End: Original strand, 16377620 - 16377833
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| ||||||||| |||||||| ||||||||   ||||||||||||||||||||| |||||||||||||| || ||||||| |||| |  ||    
T  16377620 tcacaatattaatcgtttaagatttgtgcacgattattaaagaaatgattaattgtgttgattacaatggtaaaattaatatcatttaccaaaataacct 16377719  T
Q  215 tattaattgtagttagtggagtagttaa----gttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgt 310  Q
    ||||||||||||||||||||||||||||    ||||  ||||||||||||| |||  || ||||||||     ||| || ||||| ||||||| |||| |    
T  16377720 tattaattgtagttagtggagtagttaattaagttggatgaaattcaataaataaaagtataatagtg-----aaaaaaaaaatgttgcattgatattct 16377814  T
Q  311 aaagtgagaattattttga 329  Q
    ||| ||| |||||||||||    
T  16377815 aaaatgacaattattttga 16377833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 163 - 315
Target Start/End: Original strand, 35242309 - 35242461
Alignment:
Q  163 ttaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataag 262  Q
    |||||||||||||||| |||| ||||||||| | ||||||||| || | | |||||||||||||||||| ||||||||||||||  |||||||||||||     
T  35242309 ttaattgtgttgattttaatgttaaaattagaatcatttactagaatatatttattaattgtagttagttgagtagttaagttggatgaaattcaataaa 35242408  T
Q  263 taagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagt 315  Q
    |||  || ||||||||  ||  ||||||||||  |||||||||||| ||||||    
T  35242409 taaaagtataatagtgaaaactaataataaatattgcattggtattctaaagt 35242461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 222 - 330
Target Start/End: Original strand, 7494909 - 7495018
Alignment:
Q  222 tgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaa-aataataaatgctgcattggtattgtaaagtgagaa 320  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||| ||||| ||  |||| |||||||||||||||||||||||| |||||||| ||    
T  7494909 tgtagttagcggagtagttaagttggatgaaattcaataaataagggtataataatgaaaaaaaaataataaatgctgcattggtattctaaagtgacaa 7495008  T
Q  321 ttattttgag 330  Q
    ||||||||||    
T  7495009 ttattttgag 7495018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 127 - 208
Target Start/End: Complemental strand, 19937814 - 19937733
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaa 208  Q
    |||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  19937814 tcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattaatatcatttactaaaa 19937733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 119 - 330
Target Start/End: Original strand, 11742497 - 11742708
Alignment:
Q  119 aatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttatt 218  Q
    ||||||| |||||||| |||| |||| |||||||| |||| |  |||||||| |||||||  |||||||| | | ||  ||||| |||||||| ||||||    
T  11742497 aatattagtcgtttaacgtttatgcacgattattaagaaattttttaattgtattgattttgatggtaaa-tcaatattatttattaaaacacccttatt 11742595  T
Q  219 aattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgg-gaaaaaataataaatgctgcattggtattgtaaagtga 317  Q
    ||||||||||| |||||||||||||||   |||| |||||||| ||||||| |  |  |||  ||||||||||||||| | |||| ||||| ||||||||    
T  11742596 aattgtagttaatggagtagttaagtttgatgaagttcaataaataagggtattgtcatggaaaaaaaataataaatgtttcattcgtattctaaagtga 11742695  T
Q  318 gaattattttgag 330  Q
     ||||||||||||    
T  11742696 caattattttgag 11742708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 216 - 327
Target Start/End: Original strand, 5272204 - 5272314
Alignment:
Q  216 attaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagt 315  Q
    |||||||||||||||||||||| |||| |||  ||||||||||||| ||||||| ||||| |||| |||||||||||||| |||||| ||||| ||||||    
T  5272204 attaattgtagttagtggagtaattaaattggatgaaattcaataaataagggtataataatggg-aaaaataataaatgttgcatttgtattctaaagt 5272302  T
Q  316 gagaattatttt 327  Q
    || |||||||||    
T  5272303 gacaattatttt 5272314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 213 - 330
Target Start/End: Complemental strand, 19937436 - 19937318
Alignment:
Q  213 cttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataa-taaatgctgcattggtattgta 311  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||| ||| ||| ||||| |||||||||| || |||||| ||||||| |||  ||    
T  19937436 cttattaattgtagttagtggagtagttaagttgaataaaattcaataaataaaggtataataatgggaaaaaaaaattaaatgttgcattgttatacta 19937337  T
Q  312 aagtgagaattattttgag 330  Q
    |||||| ||||||| ||||    
T  19937336 aagtgacaattattatgag 19937318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 129 - 330
Target Start/End: Complemental strand, 28186348 - 28186148
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    ||||||| |||||| |||||| ||| |||||| ||||||  ||||||| | |||||||||||||  | |||||| ||||| |  |||||| ||| |||||    
T  28186348 gtttaagttttgtggatgatttttaagaaaataattaata-tgttgatattaatggtaaaattataatcatttattaaaatatccttattcattttagtt 28186250  T
Q  229 agtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttg 328  Q
    ||  ||||||||||||||| ||||||||||||| |||     ||||||||| |||| ||||| ||| |||||||  |||| |||||||| ||||||||||    
T  28186249 agcagagtagttaagttgaatgaaattcaataaataaaaaaataatagtggaaaaatataattaatactgcatttatattataaagtgacaattattttg 28186150  T
Q  329 ag 330  Q
    ||    
T  28186149 ag 28186148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 147 - 278
Target Start/End: Original strand, 43699595 - 43699723
Alignment:
Q  147 attattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttg 246  Q
    ||||||| |||||||||||| ||||||||||||||| |||||||||||| |||||| ||||| |||| ||||||||    ||||||||||| ||||||||    
T  43699595 attattaagaaaatgattaactgtgttgatttcaatagtaaaattagtatcatttattaaaatacacctattaatt---tttagtggagtaattaagttg 43699691  T
Q  247 actgaaattcaataagtaagggtgtaatagtg 278  Q
      | |||||||||||  |||||| ||||||||    
T  43699692 gataaaattcaataaacaagggtataatagtg 43699723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 135 - 295
Target Start/End: Original strand, 28170567 - 28170727
Alignment:
Q  135 ggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtgga 234  Q
    |||||||||| || ||||   ||||||||||||| |||||||||||| |||||||||||| ||||||||||  |||   |||||||||||||||| | ||    
T  28170567 ggtttgtgcacgagtatttaaaaaatgattaattatgttgatttcaagggtaaaattagttgcatttactagtacagctttattaattgtagttaataga 28170666  T
Q  235 gtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatg 295  Q
     || |||| |||  |||||||| |||| |||| || ||||||||  |||||||||||||||    
T  28170667 ataattaaattggatgaaattctataaataagagtataatagtgaaaaaaaataataaatg 28170727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 216 - 330
Target Start/End: Original strand, 7438917 - 7439032
Alignment:
Q  216 attaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgca-ttggtattgtaaag 314  Q
    ||||||| || ||| ||||||||||||||||| ||||||||||||| ||||||| ||||||||||| ||||||||||||| || | ||| ||||  ||||    
T  7438917 attaattataattattggagtagttaagttgaatgaaattcaataaataagggtataatagtgggacaaaataataaatgatgtatttgatattcaaaag 7439016  T
Q  315 tgagaattattttgag 330  Q
    ||| ||||||||||||    
T  7439017 tgacaattattttgag 7439032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 26607946 - 26608008
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaatt 191  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  26607946 gtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaatt 26608008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 27501502 - 27501582
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagta 195  Q
    ||||||||||  |||||||||||||||| |||||||||| | ||||||| |||| ||||||||||||||||||||||||||    
T  27501502 tcacaatattcgtcgtttaaggtttgtgtatgattattaaggaaatgataaattatgttgatttcaatggtaaaattagta 27501582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 132 - 229
Target Start/End: Original strand, 1206683 - 1206781
Alignment:
Q  132 taaggtttgtgcatgattattatgaaaa-tgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtta 229  Q
    |||||||||| |||||||  || ||||| ||||||||| ||||||||||| |||||||||||||| |||||||||||| |  |||||||||||||||||    
T  1206683 taaggtttgttcatgatttgtaagaaaaatgattaattatgttgatttcagtggtaaaattagtaacatttactaaaatatccttattaattgtagtta 1206781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 162 - 326
Target Start/End: Original strand, 17346373 - 17346535
Alignment:
Q  162 attaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataa 261  Q
    ||||||| | ||||||||||  ||||||||| || |||||| ||||| |   |||||||||||||||||||||||||||||||||   ||||||||||||    
T  17346373 attaattattttgatttcaaaagtaaaattaatatcatttattaaaatatttttattaattgtagttagtggagtagttaagttggaagaaattcaataa 17346472  T
Q  262 gtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
     ||| | ||||||| |||  |||| | ||| ||  | |||||||||| |||||||| ||||||||    
T  17346473 ataaagatgtaataatgg--aaaagtgatatatattacattggtattttaaagtgacaattattt 17346535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 157 - 327
Target Start/End: Complemental strand, 19426563 - 19426395
Alignment:
Q  157 aaatgattaattgtgttgattt-caatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaatt 255  Q
    |||||||||||||||||||||| ||||| ||||||||| | |||||||||||| |   |||||||||||||| ||| ||||||||||||||  | || ||    
T  19426563 aaatgattaattgtgttgattttcaatgataaaattagcaacatttactaaaatatcattattaattgtagtaagtcgagtagttaagttggataaagtt 19426464  T
Q  256 caataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
      ||||  || ||| |||||||||| |||||||||||||| | || || |||| | |||||| |||||||||    
T  19426463 --ataaacaacggtataatagtggg-aaaaataataaatgttacactgatattttgaagtgaaaattatttt 19426395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 148 - 242
Target Start/End: Complemental strand, 31976464 - 31976370
Alignment:
Q  148 ttattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaa 242  Q
    |||||| | ||||||||| | |||||||||||||| |||||||  ||  ||||||||||||||| |||| ||||| |||||||||||||||||||    
T  31976464 ttattaaggaaatgattagtagtgttgatttcaatagtaaaatatgtttcatttactaaaacactcttaataattatagttagtggagtagttaa 31976370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 39443858 - 39443789
Alignment:
Q  119 aatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaa 188  Q
    ||||||| ||||||||||||||||||  ||||||| |||||||||||||| ||||||||||||| |||||    
T  39443858 aatattagtcgtttaaggtttgtgcacaattattaagaaaatgattaattttgttgatttcaatagtaaa 39443789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 41220954 - 41221039
Alignment:
Q  159 atgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagt 244  Q
    ||||||||||||||||||||||||  ||||||||||| |||||| ||||| |   |||||||||||||||| || |||||||||||    
T  41220954 atgattaattgtgttgatttcaattataaaattagtatcatttattaaaatatttttattaattgtagttaatgaagtagttaagt 41221039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 186 - 330
Target Start/End: Original strand, 26608178 - 26608317
Alignment:
Q  186 aaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaa 285  Q
    ||||||| || |||||||||||| || |||||||||| ||||||||||| |||||||||||| ||||| | | ||| ||||||| ||||| ||  |||||    
T  26608178 aaaattaatatcatttactaaaatactcttattaattatagttagtggattagttaagttgaatgaaaataattaaataagggtataataatgaaaaaaa 26608277  T
Q  286 ataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    ||     ||| | |||  |||||||||||||| ||||||||||||    
T  26608278 at-----atgttacatgagtattgtaaagtgacaattattttgag 26608317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 198 - 329
Target Start/End: Original strand, 26863405 - 26863539
Alignment:
Q  198 atttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtggga---aaaaataataaat 294  Q
    ||||| ||||||||  ||||||||||||||||||||||||||||||| |  ||||||||| ||| |||  || ||||||||| |   ||| |||||||||    
T  26863405 atttattaaaacacttttattaattgtagttagtggagtagttaagtcggatgaaattcattaaataaatgtataatagtggaaaagaaatataataaat 26863504  T
Q  295 gctgcattggtattgtaaagtgagaattattttga 329  Q
      | ||| | ||||||||||||| |||||||||||    
T  26863505 tttacatagatattgtaaagtgacaattattttga 26863539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 330
Target Start/End: Original strand, 34451340 - 34451511
Alignment:
Q  156 aaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaatt 255  Q
    ||||| ||||||| |||||||||| |||  ||||||||||  ||||||||||| |   | ||||||| |||||| || | ||||| |||||  |||||||    
T  34451340 aaaattattaattatgttgatttcgatgagaaaattagtattatttactaaaatattttcattaattctagttattgaaatagtttagttggatgaaatt 34451439  T
Q  256 caataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    |||||| ||| ||  ||||| ||||||||   | |||||| ||||||| |||| |||||||| ||||||||||||    
T  34451440 caataaataaaggcataatactgggaaaa---attaaatgttgcattgatattctaaagtgacaattattttgag 34451511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 261
Target Start/End: Complemental strand, 43730720 - 43730619
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattc 256  Q
    |||||||||  ||||||||||| ||||||||||||| || |||||||||||| || ||||||||||||||||| | |||||||||||| |  ||||||||    
T  43730720 aaatgattaggtgtgttgattttaatggtaaaattaatatcatttactaaaa-ac-cttattaattgtagttactagagtagttaagtag-gtgaaattc 43730624  T
Q  257 aataa 261  Q
    |||||    
T  43730623 aataa 43730619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 217 - 327
Target Start/End: Complemental strand, 18202152 - 18202041
Alignment:
Q  217 ttaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaa-taataaatgctgcattggtattgtaaagt 315  Q
    |||| ||||||||||| |||||||||||||  ||||||| ||||| |||  || | ||| |||||||||| ||| ||||||||||||||||||  |||||    
T  18202152 ttaaatgtagttagtgaagtagttaagttggatgaaatttaataaataaatgtattataatgggaaaaaaataacaaatgctgcattggtattcgaaagt 18202053  T
Q  316 gagaattatttt 327  Q
    || |||||||||    
T  18202052 gacaattatttt 18202041  T

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Target: chr2; HSP #49
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 127 - 267
Target Start/End: Original strand, 18853176 - 18853317
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaa--aattagtagcatttactaaaacacacttattaattgt 224  Q
    ||||||||  |||||||| |||  ||| | |||| |||||||||||||||||||||| |||  |||| ||| ||||||| |||| || ||||||| ||||    
T  18853176 tcgtttaaaatttgtgcacgatctttaaggaaataattaattgtgttgatttcaatgataattaatt-gtatcatttaccaaaatactcttattagttgt 18853274  T
Q  225 agttagtggagtagttaagttgactgaaattcaataagtaagg 267  Q
    ||||||| ||||| |||| |||  ||||||||||||| |||||    
T  18853275 agttagtagagtaattaatttggatgaaattcaataaataagg 18853317  T

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Target: chr2; HSP #50
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 25904813 - 25904722
Alignment:
Q  239 ttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaa-aataataaatgctgcattggtattgtaaagtgagaattattttga 329  Q
    ||||||||| ||||||||||||| | ||||| ||||||||| |||| ||||||||||| ||||||  |||| |||||||| |||||||||||    
T  25904813 ttaagttgaatgaaattcaataaattagggtataatagtggaaaaataataataaatgatgcattaatattttaaagtgacaattattttga 25904722  T

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Target: chr2; HSP #51
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 34120641 - 34120700
Alignment:
Q  271 taatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  34120641 taataatggaaaaaaataataaatgctgcattggtattttaaagtgacaattattttgag 34120700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 224
Target Start/End: Complemental strand, 32783498 - 32783404
Alignment:
Q  130 tttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgt 224  Q
    |||||||||  |||| | |||||| ||||||||||||||||||| ||||  || ||||||||| || |||||||||||||||  |||||||||||    
T  32783498 tttaaggttgatgcacggttattaagaaaatgattaattgtgtttattttgatagtaaaattaatatcatttactaaaacacctttattaattgt 32783404  T

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Target: chr2; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 313
Target Start/End: Original strand, 38187903 - 38188044
Alignment:
Q  171 gttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtg 270  Q
    ||||| || |||||||||||||||   |||||||||||||| | ||||||||||||||||| |||||  |||||  | ||||||||||||| ||| |||     
T  38187903 gttgactttaatggtaaaattagtttaatttactaaaacacccctattaattgtagttagtcgagtatgtaagtgaagtgaaattcaataaataatggta 38188002  T
Q  271 taatagtgggaaaaaataataaatgctgcattggtattgtaaa 313  Q
    ||  ||| ||||||| ||||||||| ||  |||||||| ||||    
T  38188003 tatgagt-ggaaaaattaataaatgttgatttggtattctaaa 38188044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 214 - 327
Target Start/End: Complemental strand, 19444196 - 19444083
Alignment:
Q  214 ttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaa 313  Q
    |||||||||||| ||||| ||||||||||| ||  | || ||||||||  |||||| ||||| ||  ||||||||||||||| ||||||| |||| | ||    
T  19444196 ttattaattgtaattagtcgagtagttaagatggataaatttcaataaacaagggtataataatgtaaaaaaataataaatgttgcattgatattttgaa 19444097  T
Q  314 gtgagaattatttt 327  Q
    |||| |||||||||    
T  19444096 gtgacaattatttt 19444083  T

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Target: chr2; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 242
Target Start/End: Original strand, 32831203 - 32831266
Alignment:
Q  179 caatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaa 242  Q
    |||||||||||||| || ||||||||||||||   |||||||||||||||| ||||||||||||    
T  32831203 caatggtaaaattaatatcatttactaaaacatctttattaattgtagttattggagtagttaa 32831266  T

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Target: chr2; HSP #56
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 343 - 379
Target Start/End: Complemental strand, 3601389 - 3601353
Alignment:
Q  343 tgctaaagagacaataattgtgagacggagggagtat 379  Q
    |||||||||||||||||||||||||||||||||||||    
T  3601389 tgctaaagagacaataattgtgagacggagggagtat 3601353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 3601464 - 3601416
Alignment:
Q  184 gtaaaattagtagcatttactaaaacacacttattaattgtagttagtg 232  Q
    |||||| |||| |||||||||||||||| ||||||||||||||||||||    
T  3601464 gtaaaaatagttgcatttactaaaacacccttattaattgtagttagtg 3601416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 15435498 - 15435447
Alignment:
Q  137 tttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaa 188  Q
    ||||||||||||| ||| |||||| |||||||||||||||||||||| ||||    
T  15435498 tttgtgcatgatttttaagaaaataattaattgtgttgatttcaatgataaa 15435447  T

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Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 224
Target Start/End: Original strand, 10005101 - 10005197
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgt 224  Q
    ||||||||||||||||||   |||| | ||||||||| ||||||||||||||||    ||||||||||| |||||||||||| |   |||||||||||    
T  10005101 tcgtttaaggtttgtgcacatttataa-gaaaatgatcaattgtgttgatttcagcaataaaattagtatcatttactaaaatatctttattaattgt 10005197  T

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Target: chr2; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 222
Target Start/End: Complemental strand, 11367214 - 11367121
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaatt 222  Q
    |||||| ||| ||||| ||||| || ||| |||||||||||||||||||| ||| ||||||||| |  |||||||| ||| ||  |||||||||    
T  11367214 gtttaaagttcgtgcaagattagtaagaagatgattaattgtgttgattttaattgtaaaattaatgtcatttacttaaatacctttattaatt 11367121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 313
Target Start/End: Complemental strand, 23492978 - 23492822
Alignment:
Q  158 aatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagtta-agttgactgaaattc 256  Q
    ||||||| || |||||||||| || ||||||||  |||  ||||||| ||||||| ||||||||| || || |  ||||||||  || ||| |||||| |    
T  23492978 aatgattgatagtgttgattttaacggtaaaatatgtattatttactgaaacacagttattaattataatttgcagagtagttttagatgattgaaatgc 23492879  T
Q  257 aataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaa 313  Q
    ||||| |||| || |  |||||| ||| ||||||||||| || ||| ||||||||||    
T  23492878 aataaataagagtatgttagtggaaaagaataataaatgttgtatttgtattgtaaa 23492822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 330
Target Start/End: Complemental strand, 39443774 - 39443705
Alignment:
Q  257 aataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    ||||| ||||||| ||||||||||||||||    ||||| ||||||| ||||||||| ||| ||||||||||||    
T  39443774 aataaataagggtataatagtgggaaaaaa----aaatgatgcattgatattgtaaaatgataattattttgag 39443705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 192
Target Start/End: Original strand, 12520836 - 12520891
Alignment:
Q  137 tttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaatta 192  Q
    |||||||| |||||| |  ||||| ||||||||||||||||| |||||||||||||    
T  12520836 tttgtgcacgattatcaataaaataattaattgtgttgattttaatggtaaaatta 12520891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 138 - 241
Target Start/End: Original strand, 26337109 - 26337211
Alignment:
Q  138 ttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagta 237  Q
    ||||||||| || ||| | ||||||||| ||  |||||||| |||| |||||||  || |||||| ||||||||   |||||||| ||||||||||||||    
T  26337109 ttgtgcatggtttttaaggaaatgatta-ttaagttgattttaatgttaaaattgatatcatttattaaaacacctctattaattatagttagtggagta 26337207  T
Q  238 gtta 241  Q
    ||||    
T  26337208 gtta 26337211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 313
Target Start/End: Complemental strand, 30996419 - 30996305
Alignment:
Q  198 atttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgct 297  Q
    |||||| ||||||| |||||||||| |||||| |||||||||| || | | |||||| |||||| |||| || |  |||| ||||| ||||||||||| |    
T  30996419 atttacaaaaacactcttattaattatagttactggagtagtt-agataaatgaaatgcaataaataagagtatgttagtcggaaagaataataaatgtt 30996321  T
Q  298 gcattggtattgtaaa 313  Q
    | |||| |||| ||||    
T  30996320 gtattgatattttaaa 30996305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 160 - 308
Target Start/End: Original strand, 36173351 - 36173493
Alignment:
Q  160 tgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaat 259  Q
    ||||||||| ||||||||| | || |||||||| || |||||| ||||| || ||||| |||| || ||||||||    ||||||| | |||||||||||    
T  36173351 tgattaattttgttgattttagtgataaaattaatatcatttattaaaatactcttat-aattataattagtgga----ttaagtttaatgaaattcaat 36173445  T
Q  260 aagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtatt 308  Q
    || |||  || ||||||| | ||| ||||||||||| ||||||| ||||    
T  36173446 aaataaaagtataatagttg-aaataataataaatgatgcattgatatt 36173493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 224
Target Start/End: Original strand, 4411001 - 4411067
Alignment:
Q  158 aatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgt 224  Q
    ||||||||||  ||||||||| ||||| ||||| | || ||||| ||||||| ||||||||||||||    
T  4411001 aatgattaataatgttgattttaatggcaaaatgaatatcatttgctaaaacgcacttattaattgt 4411067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 43730537 - 43730487
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaa 207  Q
    |||||||||  ||||||||||| ||||||||||||| || |||||||||||    
T  43730537 aaatgattaggtgtgttgattttaatggtaaaattaatatcatttactaaa 43730487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 7438870 - 7438923
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaatt 168  Q
    ||||||||||| | |||||||||||| ||| |||||||| | ||||||||||||    
T  7438870 tcacaatattagttgtttaaggtttgagcacgattattaaggaaatgattaatt 7438923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 267
Target Start/End: Original strand, 33406993 - 33407089
Alignment:
Q  170 tgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagg 267  Q
    ||||||||| |||||||||||  ||  |||||||  ||||||  ||||||||| ||||||||||| ||||| || ||| |||||| |||||| |||||    
T  33406993 tgttgattttaatggtaaaatatgtttcatttaccgaaacaccattattaattatagttagtggattagtt-agatgagtgaaatgcaataaataagg 33407089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 11366767 - 11366719
Alignment:
Q  281 aaaaaataataaatgctgcattggtattgtaaagtgagaattattttga 329  Q
    ||||||||||||||| ||||||| ||||||||| ||| || ||||||||    
T  11366767 aaaaaataataaatgttgcattgatattgtaaaatgacaaatattttga 11366719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 162; Significance: 2e-86; HSPs: 80)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 113 - 378
Target Start/End: Original strand, 11373399 - 11373664
Alignment:
Q  113 tttcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacaca 212  Q
    ||||||||||||| |||||||||| ||||||| |||||||| | ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||     
T  11373399 tttcacaatattagtcgtttaaggattgtgcacgattattaaggaaatgtttaattgtgttgatttcgatggtaaaattagtagcatttactaaaacacc 11373498  T
Q  213 cttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaa 312  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||| |||| || ||||||||||||||||||||||||||||||||| ||||||||    
T  11373499 cttattaattgtagttagtggagtagttaagttggatgaaattcaataaataagagtataatagtgggaaaaaataataaatgctgcattgatattgtaa 11373598  T
Q  313 agtgagaattattttgagnnnnnnnnnnnntgctaaagagacaataattgtgagacggagggagta 378  Q
    ||| | ||||||||||||            || |||||||||||||||||||||||||||||||||    
T  11373599 agtaacaattattttgagaaaaagaaaaaatggtaaagagacaataattgtgagacggagggagta 11373664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 115 - 381
Target Start/End: Original strand, 21350601 - 21350865
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| |||||||||||||||||| |||||||| | ||||   |||||||||||||||||||||||||| |||| | |||||||||||||| ||    
T  21350601 tcacaatattagtcgtttaaggtttgtgcacgattattaaggaaat---taattgtgttgatttcaatggtaaaaatagttgtatttactaaaacaccct 21350697  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgg-gaaaaaataataaatgctgcattggtattgtaaa 313  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||| ||||||| |||||||||  |||||||||||||||||||||||||||||||||    
T  21350698 tattaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtataatagtggaaaaaaaataataaatgctgcattggtattgtaaa 21350797  T
Q  314 gtgagaattattttgagnnnnnnnnnnnntgctaaagagacaataattgtgagacggagggagtataa 381  Q
    |||| ||||||||||||            || |||| |||||||||||||||||| ||||||||||||    
T  21350798 gtgacaattattttgagaaaaagaaaaaatgttaaaaagacaataattgtgagacagagggagtataa 21350865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 34947644 - 34947441
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||||||||||||||| ||||||   |||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||    
T  34947644 tcgtttaaggtttgtgcatgtttattaaagaaatgattaattgtgttgatttcaatggtaaaattattatcatttactaaaacacccttattaattgtag 34947545  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||||||||||||||||||||  ||||||||||||| | ||||| ||||| ||| ||||||||||||||| |||||||||||| |||||||| ||||||||    
T  34947544 ttagtggagtagttaagttggatgaaattcaataaatgagggtataataatggaaaaaaataataaatgttgcattggtattctaaagtgacaattattt 34947445  T
Q  327 tgag 330  Q
    ||||    
T  34947444 tgag 34947441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 115 - 380
Target Start/End: Complemental strand, 28103889 - 28103621
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||  |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||    
T  28103889 tcacaatatttgtcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagcagcatttaccaaaacaccct 28103790  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgg---gaaaaaataataaatgctgcattggtattgta 311  Q
    |||||||||||||||||| ||| |||||||||  ||||||||||||| |||| || |||||||||    ||||||||||||||| |||| | ||||||||    
T  28103789 tattaattgtagttagtgaagtggttaagttggatgaaattcaataaataagcgtataatagtggaaaaaaaaaataataaatgttgcaattgtattgta 28103690  T
Q  312 aagtgagaattattttgagnnnnnnnnnnnntgctaaagagacaataattgtgagacggagggagtata 380  Q
    |||||| ||||||||||||            || |||||||| ||||||||||||||||||||||||||    
T  28103689 aagtgacaattattttgagaaaaagaaaaattgttaaagagataataattgtgagacggagggagtata 28103621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 119 - 329
Target Start/End: Complemental strand, 2459621 - 2459413
Alignment:
Q  119 aatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttatt 218  Q
    ||||||| |||||||| ||||||||| |||||||| | ||||||||||||||||||||||||| ||||||||||||  ||||||||| ||||| ||||||    
T  2459621 aatattagtcgtttaatgtttgtgcacgattattaaggaaatgattaattgtgttgatttcaacggtaaaattagt--catttactacaacacccttatt 2459524  T
Q  219 aattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgag 318  Q
    |||||||||||||||||||||||||| |  ||||||||||||| ||||||| ||||||||  ||||||||||||||||||||||||||||||||||||      
T  2459523 aattgtagttagtggagtagttaagtaggatgaaattcaataaataagggtataatagtgaaaaaaaataataaatgctgcattggtattgtaaagtgtc 2459424  T
Q  319 aattattttga 329  Q
    |||||||||||    
T  2459423 aattattttga 2459413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 115 - 330
Target Start/End: Original strand, 8592413 - 8592628
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    |||||||||||  ||||||||||||||||||||||||||   ||||||||||||||||||||||||||||| |||||||||| ||||| |||||||| ||    
T  8592413 tcacaatattagccgtttaaggtttgtgcatgattattaaagaaatgattaattgtgttgatttcaatggttaaattagtagtatttaataaaacaccct 8592512  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaag 314  Q
    ||||||||||||||||||||||||| |||||   ||||||| ||||| |||| || ||||||| ||||||||||||||||||||||||| |||||||||     
T  8592513 tattaattgtagttagtggagtagtaaagttagatgaaatttaataaataagagtataatagtaggaaaaaataataaatgctgcattgatattgtaaaa 8592612  T
Q  315 tgagaattattttgag 330  Q
    ||| ||||||||||||    
T  8592613 tgaaaattattttgag 8592628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 130 - 378
Target Start/End: Original strand, 759079 - 759327
Alignment:
Q  130 tttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtta 229  Q
    |||||||||| ||||  ||||||| | ||||||||||||||||||||||  ||||||||| ||||| ||||||||||||||  |||||||||||||||||    
T  759079 tttaaggtttatgcacaattattaaggaaatgattaattgtgttgattttgatggtaaaactagtatcatttactaaaacatccttattaattgtagtta 759178  T
Q  230 gtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttga 329  Q
    | |||||||||||||||  ||||||||||||| ||||||| ||||| ||| |||||||||||||||||||||||||||| |||||||| |||||||||||    
T  759179 gcggagtagttaagttggatgaaattcaataaataagggtataataatggaaaaaaataataaatgctgcattggtattctaaagtgacaattattttga 759278  T
Q  330 gnnnnnnnnnnnntgctaaagagacaataattgtgagacggagggagta 378  Q
    |            || |||||||||||| ||||||||||||||||||||    
T  759279 gaaaaagaaaagatggtaaagagacaattattgtgagacggagggagta 759327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 116 - 330
Target Start/End: Complemental strand, 37245847 - 37245631
Alignment:
Q  116 cacaatattactcgtttaaggtttgtgcatgattatt---atgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacaca 212  Q
    |||||||||  | |||||||||||||||| |||||||   | ||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||     
T  37245847 cacaatatttatggtttaaggtttgtgcacgattatttataagaaaaagattaattctgttgatttcaatggtaaa-ttagtagcatttactaaaacact 37245749  T
Q  213 cttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaa 312  Q
    ||||||||||||| | |||||||| |||||||||  ||||||||||||| ||||||| |||||||| |||||||||||||||| ||||||||||||||||    
T  37245748 cttattaattgtaataagtggagtggttaagttggatgaaattcaataaataagggtataatagtgagaaaaaataataaatgttgcattggtattgtaa 37245649  T
Q  313 agtgagaattattttgag 330  Q
    ||||| ||||||||||||    
T  37245648 agtgacaattattttgag 37245631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 127 - 330
Target Start/End: Original strand, 21759969 - 21760172
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||| |||||||| |||| |||||||||    
T  21759969 tcgtttaaggtttgtgcatgattattaagaaaatgattaattgtgttgattttgatggtaaaattagtatcatttaataaaacacccttactaattgtag 21760068  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||| ||||||||||||||||  ||||||||||||| | ||||| |||||  || |||| |||||||||| ||||||| |||| |||||||| ||||||||    
T  21760069 ttaatggagtagttaagttggatgaaattcaataattgagggtataataaaggaaaaatataataaatgttgcattgatattctaaagtgacaattattt 21760168  T
Q  327 tgag 330  Q
    ||||    
T  21760169 tgag 21760172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 131 - 330
Target Start/End: Original strand, 41506054 - 41506253
Alignment:
Q  131 ttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttag 230  Q
    ||||||||| |||| |||||||| | ||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41506054 ttaaggtttatgcacgattattaaggaaatgattaattgtgttaattttaatggtaaaattagtagcatttactaaaacactcttattaattgtagttag 41506153  T
Q  231 tggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    ||||||||||||||||  ||||||||||||| |||| || ||||| ||  ||||| ||||||||  ||||||| ||||||||||||| ||||||||||||    
T  41506154 tggagtagttaagttggatgaaattcaataaataagagtataatattgaaaaaaattaataaatattgcattgatattgtaaagtgataattattttgag 41506253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 98 - 380
Target Start/End: Original strand, 34100503 - 34100785
Alignment:
Q  98 ttattattccttccatttcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagc 197  Q
    |||||| ||| ||| | ||||||||||| | ||||||| |||||  | |||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  34100503 ttattactccatccgtctcacaatattagttgtttaagatttgtcaacgattattaagaaaatgattaattgtgttgatttcaatagtaaaattagtagc 34100602  T
Q  198 atttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgct 297  Q
    ||||||||||| |   |||||||||||||||| || |||||||||||||  ||| ||||||||| ||||||| ||||||||  |||| |||||||||| |    
T  34100603 atttactaaaatatctttattaattgtagttactgaagtagttaagttggatgacattcaataaataagggtataatagtgaaaaaacataataaatgtt 34100702  T
Q  298 gcattggtattgtaaagtgagaattattttgagnnnnnnnnnnnntgctaaagagacaataattgtgagacggagggagtata 380  Q
    ||||| |||||||||||||| ||||||||| ||            || ||||| |||||||||||||||||||||||||||||    
T  34100703 gcattagtattgtaaagtgacaattattttaagaaaaataaaaaatgttaaagtgacaataattgtgagacggagggagtata 34100785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 115 - 378
Target Start/End: Complemental strand, 23670641 - 23670378
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| ||||||||||||||||||  ||||||| |  ||| |||||||||||||||||| |||||||||||| |||||||||||||||||| ||    
T  23670641 tcacaatattaatcgtttaaggtttgtgcacaattattaagggaat-attaattgtgttgatttccatggtaaaattaatagcatttactaaaacactct 23670543  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatag-tgggaaaaaataataaatgctgcattggtattgtaaa 313  Q
    ||||||| |||||||||||||||||||||||   ||||||| ||||| |||| || ||||||  |||  ||||||||||||| |||||| ||||||||||    
T  23670542 tattaatggtagttagtggagtagttaagtttgatgaaatttaataaataagagtataatagcggggggaaaataataaatgatgcattagtattgtaaa 23670443  T
Q  314 gtgagaattattttgagnnnnnnnnnnnntgctaaagagacaataattgtgagacggagggagta 378  Q
    |||| ||||||||||||            ||||||||||| ||||||||||||||||||||||||    
T  23670442 gtgacaattattttgagaaaaataaaaaatgctaaagagataataattgtgagacggagggagta 23670378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 127 - 326
Target Start/End: Original strand, 24516274 - 24516473
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||| | || ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||| |  ||||||||||||||    
T  24516274 tcgtttaaggtttatacacgattattaataaaatgattaattgtgttgatttcaatggtaaaattagtaacatttactaaaaaaaccttattaattgtag 24516373  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||||||||||||||||||||  ||||||||||||| ||| | |  ||||||||||||| |||||||||| ||||||| ||||||||| ||| ||||||||    
T  24516374 ttagtggagtagttaagttggatgaaattcaataaataaagataaaatagtgggaaaagataataaatgttgcattgatattgtaaaatgacaattattt 24516473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 109 - 330
Target Start/End: Complemental strand, 5524542 - 5524321
Alignment:
Q  109 tccatttcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaa 208  Q
    ||||| ||||||||||  |||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  5524542 tccatctcacaatatttgtcgtttaaagtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtaacatttaataaaa 5524443  T
Q  209 cacacttattaattgtagttagtggagtagttaagttgactgaaat---tcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggt 305  Q
    |||  ||||||||| |||||||| ||||||||||||||  ||||||   | ||||| ||| ||| |||||||||  ||||| || ||||||||||||| |    
T  5524442 cacttttattaattatagttagttgagtagttaagttggatgaaatttattaataaataaaggtataatagtgg--aaaaagaa-aaatgctgcattgat 5524346  T
Q  306 attgtaaagtgagaattattttgag 330  Q
    |||||||||||||||||||||||||    
T  5524345 attgtaaagtgagaattattttgag 5524321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 129 - 329
Target Start/End: Complemental strand, 33819356 - 33819154
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    ||||||||||  || | |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||| |||    
T  33819356 gtttaaggttaatgtacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttacaaaatcactcttattaattgttgtt 33819257  T
Q  229 agtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtggga--aaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
     |||||||||| ||||||| ||||||||| ||| ||||||| ||||||||  |  || ||||||||||||||||||||||||||||||||| ||||||||    
T  33819256 tgtggagtagtgaagttgaatgaaattcattaaataagggtataatagtgaaaataataataataaatgctgcattggtattgtaaagtgacaattattt 33819157  T
Q  327 tga 329  Q
    |||    
T  33819156 tga 33819154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 129 - 330
Target Start/End: Original strand, 28202296 - 28202497
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    ||||||||||| |||| | |||||| |||||| |||||||||||||||||  |||||||||||| |  ||||||||||||||  ||||||||||||||||    
T  28202296 gtttaaggtttatgcacggttattaagaaaataattaattgtgttgattttgatggtaaaattaatgtcatttactaaaacatccttattaattgtagtt 28202395  T
Q  229 agtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttg 328  Q
    ||||||||||| ||||||  ||||||||||||| |||| || ||||| ||| |||||||||||||||||| ||||||||| |||||||| ||||||||||    
T  28202396 agtggagtagtaaagttggatgaaattcaataaataagagtataataatggaaaaaaataataaatgctgtattggtattctaaagtgacaattattttg 28202495  T
Q  329 ag 330  Q
    ||    
T  28202496 ag 28202497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 83529 - 83325
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||| ||||  ||||||| | ||||||||||||||||||||||  ||||||||||||||| ||||||||||||||  ||||||||||||||    
T  83529 tcgtttaaggtttatgcacaattattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacattcttattaattgtag 83430  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgg-gaaaaaataataaatgctgcattggtattgtaaagtgagaattatt 325  Q
    |||| ||||||||||||||   ||||||||||||| |||| || | ||| |||  |||||||||||||||||||||||||||| |||||||| |||||||    
T  83429 ttagcggagtagttaagtttgatgaaattcaataaataagagtatgataatggaaaaaaaataataaatgctgcattggtattctaaagtgacaattatt 83330  T
Q  326 ttgag 330  Q
    |||||    
T  83329 ttgag 83325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 118 - 330
Target Start/End: Original strand, 19271709 - 19271920
Alignment:
Q  118 caatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttat 217  Q
    |||| ||| |||||||| | ||||||| ||||||||  |||||||||||||||||||||||||||| | |||||||| ||||| ||||||| ||  ||||    
T  19271709 caatgttagtcgtttaatgcttgtgcacgattattaaaaaaatgattaattgtgttgatttcaatgatcaaattagtggcattgactaaaatacttttat 19271808  T
Q  218 taattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtga 317  Q
    |||||||||||||||||||||||||||||  ||||| | ||||| ||||||| ||||| | ||||||||||||||||| ||||||||||||||||||| |    
T  19271809 taattgtagttagtggagtagttaagttggatgaaaattaataaataagggtataata-ttggaaaaaataataaatgttgcattggtattgtaaagtaa 19271907  T
Q  318 gaattattttgag 330  Q
     ||||||||||||    
T  19271908 caattattttgag 19271920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 115 - 329
Target Start/End: Original strand, 7457394 - 7457607
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| |  ||||| ||||||||| ||||||||  ||||||||||||| |||||||||||||||||||||||||  |||||||||||| || ||    
T  7457394 tcacaatattagttatttaatgtttgtgcacgattattaaaaaaatgattaattatgttgatttcaatggtaaaattagttacatttactaaaagaccct 7457493  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaag 314  Q
    |||||| ||||||||| ||| || ||||||| | | ||||||||||| |||| || ||||||| ||||||||||||||||| ||||||| ||||||||||    
T  7457494 tattaaatgtagttagcggaataattaagttaaattaaattcaataaataagagtataatagt-ggaaaaaataataaatgttgcattgatattgtaaag 7457592  T
Q  315 tgagaattattttga 329  Q
    ||| |||||||||||    
T  7457593 tgataattattttga 7457607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 129 - 327
Target Start/End: Original strand, 3178191 - 3178391
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    ||||||||||||||||||||||||| | |||||||| |||||||||||||  |||||||||||| || |||||||||||||||  |||||||||||||||    
T  3178191 gtttaaggtttgtgcatgattattaagtaaatgattgattgtgttgattttgatggtaaaattaatatcatttactaaaacacctttattaattgtagtt 3178290  T
Q  229 agtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataa--atgctgcattggtattgtaaagtgagaattattt 326  Q
    ||||||||||||||||||  ||||||||||||| ||||||| || || |||||||| |||||||  ||| |||||| ||||| |||||| | ||||||||    
T  3178291 agtggagtagttaagttggatgaaattcaataaataagggtatattaatgggaaaacataataaatatgttgcattagtattctaaagtaacaattattt 3178390  T
Q  327 t 327  Q
    |    
T  3178391 t 3178391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 129 - 330
Target Start/End: Original strand, 32346039 - 32346240
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    |||||||||||||| | | |||||| | |||| ||| ||||||||||||||||||||||||||| || ||| |||||||| || |||||||||| || ||    
T  32346039 gtttaaggtttgtgtacggttattaaggaaataattgattgtgttgatttcaatggtaaaattaatatcatctactaaaatactcttattaattataatt 32346138  T
Q  229 agtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttg 328  Q
    ||||||||||||||||||| ||||||||||||| ||||||| ||||| ||| |||| ||||||||||||||||| ||||| |||| ||| ||||||||||    
T  32346139 agtggagtagttaagttgaatgaaattcaataaataagggtataataatggaaaaagataataaatgctgcattagtattctaaaatgataattattttg 32346238  T
Q  329 ag 330  Q
    ||    
T  32346239 ag 32346240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 40076459 - 40076259
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||| |||| ||||||||   ||||||||||||||||| ||||  ||||||||||||||| |||||||||||||||  ||||||||||||     
T  40076459 tcgtttaaggtttatgcacgattattaaagaaatgattaattgtgttaattttgatggtaaaattagtatcatttactaaaacactattattaattgtac 40076360  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||||   | |||||||||||  ||||||||||||| ||||||||| ||| ||| |||||||||||||||||||||||||||| |||||||| ||||||||    
T  40076359 ttag---attagttaagttggatgaaattcaataaataagggtgtgataatggaaaaaaataataaatgctgcattggtattataaagtgacaattattt 40076263  T
Q  327 tgag 330  Q
    ||||    
T  40076262 tgag 40076259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 119 - 330
Target Start/End: Complemental strand, 7463365 - 7463153
Alignment:
Q  119 aatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttatt 218  Q
    ||||||| |||||||||| ||||||| | |||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||| || || |||    
T  7463365 aatattagtcgtttaaggattgtgcacggttattaaggaaatgattaattgtgttgatttcaatgataaaattagtagcatttacttaaataccctcatt 7463266  T
Q  219 aattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgca-ttggtattgtaaagtga 317  Q
    ||||||||||||||||||||||||||||  ||||||||||||| ||| | |  |||||||  ||| ||||||||||| |||| ||| |||||||||||||    
T  7463265 aattgtagttagtggagtagttaagttggatgaaattcaataaataaagatagaatagtgaaaaataataataaatgatgcatttgttattgtaaagtga 7463166  T
Q  318 gaattattttgag 330  Q
      |||||||||||    
T  7463165 cgattattttgag 7463153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 9786132 - 9785929
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||| |||||| |||||||| | ||||||||||||||||||||||  |||||||||||| |  ||||||||||||||| ||||||||||||||    
T  9786132 tcgtttaaggtctgtgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattaatttcatttactaaaacacgcttattaattgtag 9786033  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    |||||| |||||||||||||  | ||||||||||| ||||||| |||||  |  ||| ||||||||||||||||||  |||| |||||||| ||||||||    
T  9786032 ttagtgaagtagttaagttggataaaattcaataaataagggtataataaagaaaaataataataaatgctgcattaatattttaaagtgacaattattt 9785933  T
Q  327 tgag 330  Q
    ||||    
T  9785932 tgag 9785929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 43874067 - 43873864
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||  |||||| ||||||   ||||||||||||||||||||||  |||||||||||| || ||||||||||||||| |||||||| |||||    
T  43874067 tcgtttaaggttgatgcatggttattaaagaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacacccttattaaatgtag 43873968  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||||||||||||||||||||  |||| || ||||| |||  || | ||| ||||||||||||||||||||||||||| |||| |||||||| ||||||||    
T  43873967 ttagtggagtagttaagttggatgaagtttaataaataaatgtattataatgggaaaaaataataaatgctgcattgatattctaaagtgacaattattt 43873868  T
Q  327 tgag 330  Q
    ||||    
T  43873867 tgag 43873864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 127 - 379
Target Start/End: Complemental strand, 21390439 - 21390186
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||| |||| |||||||| | ||||||||||||||||| ||||  ||||||||| || || ||||||||||||||  |||||| |||||||    
T  21390439 tcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttaattttgatggtaaaactaatatcatttactaaaacatccttattgattgtag 21390340  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgg-gaaaaaataataaatgctgcattggtattgtaaagtgagaattatt 325  Q
    |||||||||||||||||||   ||||||||||||| ||||||| ||||| |||  ||||||||||||| | |||||||||||| |||||||| |||||||    
T  21390339 ttagtggagtagttaagttagatgaaattcaataaataagggtataataatggaaaaaaaataataaacgttgcattggtattataaagtgacaattatt 21390240  T
Q  326 ttgagnnnnnnnnnnnntgctaaagagacaataattgtgagacggagggagtat 379  Q
    |||||            ||||||||||||||| ||||| | |||||||||||||    
T  21390239 ttgagaaaaagaaaagatgctaaagagacaattattgtaacacggagggagtat 21390186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 115 - 312
Target Start/End: Complemental strand, 22738857 - 22738661
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| ||||||||||||| |||| ||||||||   |||||||||||||||| |||||||||||||||||||||| |||||||||||| |  ||    
T  22738857 tcacaatattagtcgtttaaggtttatgcacgattattaaagaaatgattaattgtgtagatttcaatggtaaaattagtatcatttactaaaatatcct 22738758  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaa 312  Q
     |||||||||||||||| || |||||||||||  ||||||| ||||| ||| ||| ||||||| ||||||||||||||||| | ||||||||||||||    
T  22738757 cattaattgtagttagtagattagttaagttggatgaaatttaataaataaaggtataatagt-ggaaaaaataataaatgttccattggtattgtaa 22738661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 42935805 - 42935599
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||  |||| | |||||| ||||||||||||||||||||||||  |||||||||||| || ||||||||||||||| ||||||||||||||    
T  42935805 tcgtttaaggttgatgcacggttattaagaaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacacccttattaattgtag 42935706  T
Q  227 ttagt---ggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaatta 323  Q
    |||||   |||| ||||||||||  |||| |||||||| |||| || | ||| | ||||||||||||||||| |||||| ||||| |||||||| |||||    
T  42935705 ttagtggaggaggagttaagttggatgaagttcaataaataagagtattataattggaaaaaataataaatgttgcatttgtattctaaagtgacaatta 42935606  T
Q  324 ttttgag 330  Q
    |||||||    
T  42935605 ttttgag 42935599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 127 - 327
Target Start/End: Complemental strand, 26974173 - 26973966
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagt---agcatttactaaaacacacttattaattg 223  Q
    |||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||| |   | |||||||||||| || |||||||||||    
T  26974173 tcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattaatatcatcatttactaaaatactcttattaattg 26974074  T
Q  224 tagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgg--gaaaaaataa--taaatgctgcattggtattgtaaagtgaga 319  Q
    |||||||||||||||||||||||| ||||||| | ||| |||  || |||||||||  ||||||| ||   |||| |||||||| ||||||||||||| |    
T  26974073 tagttagtggagtagttaagttgaatgaaatttattaaataaatgtataatagtggaagaaaaaaaaaataaaatactgcattgatattgtaaagtgaca 26973974  T
Q  320 attatttt 327  Q
    ||||||||    
T  26973973 attatttt 26973966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 127 - 378
Target Start/End: Complemental strand, 38391892 - 38391645
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||| ||||  ||||||| ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||| ||| ||||||||||    
T  38391892 tcgtttaaggtttatgcacaattattaagaaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacactcttgttaattgtag 38391793  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtg-ggaaaaaataataaatgctgcattggtattgtaaagtgagaattatt 325  Q
    |||||||| || ||||||||  ||||||||||||| |||  || ||||| ||   ||||||||||||||     |||| |||| |||||||| |||||||    
T  38391792 ttagtggaataattaagttggatgaaattcaataaataaaagtataataatgaaaaaaaaataataaat-----attgatattataaagtgacaattatt 38391698  T
Q  326 ttgagnnnnnnnnnnnntgctaaagagacaataattgtgagacggagggagta 378  Q
    |||||            || |||||||||||| ||||||||||||||||||||    
T  38391697 ttgagaaaaagaaaaaatggtaaagagacaattattgtgagacggagggagta 38391645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 119 - 312
Target Start/End: Original strand, 46478270 - 46478464
Alignment:
Q  119 aatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttatt 218  Q
    ||||||| |||||||| |||  | || ||||||||   ||||||||||||||||| |||| ||| ||||| ||||||||||||||||||| || ||||||    
T  46478270 aatattagtcgtttaaagttcatacacgattattaattaaatgattaattgtgttaattttaatagtaaagttagtagcatttactaaaatacccttatt 46478369  T
Q  219 aattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgg-gaaaaaataataaatgctgcattggtattgtaa 312  Q
    ||||||||||| | ||||||||||||||  ||||||||||||| |||| || |||||||||  ||||||||||||||| ||||| ||||||||||    
T  46478370 aattgtagttaattgagtagttaagttggatgaaattcaataaataagagtataatagtggaaaaaaaataataaatgttgcatcggtattgtaa 46478464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 48609006 - 48608808
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||| |||||| ||||||||||||| | ||||||||||||||||||||||  ||||||||| |||||    |||||||||||  ||||||||| ||||    
T  48609006 tcgtttgaggtttatgcatgattattaaggaaatgattaattgtgttgattttgatggtaaaactagta----ttactaaaacatccttattaatcgtag 48608911  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||||||  ||||||||||||  ||||||||||||| |||| || ||||| | |||||||||||||||| |||||||  |||| |||||||| ||||||||    
T  48608910 ttagtgatgtagttaagttggatgaaattcaataaataagagtataataat-ggaaaaaataataaatactgcattaatattttaaagtgacaattattt 48608812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 148 - 330
Target Start/End: Complemental strand, 27921111 - 27920927
Alignment:
Q  148 ttattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttga 247  Q
    |||||| |||||||||||||| ||||||||| |||||||||||||||| |||||| |||||||| |||||||||||||||||||| | |||||||||||     
T  27921111 ttattaagaaaatgattaattatgttgattttaatggtaaaattagtatcatttattaaaacactcttattaattgtagttagtgcattagttaagttgg 27921012  T
Q  248 ctgaaattcaataagtaagggtgtaatagtggg--aaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
     |||| |||||| | |||| || | ||| ||||  ||||||||||||||| ||||||  |||| |||||||| ||||||||||||    
T  27921011 atgaagttcaatcaataagagtattataatggggaaaaaaataataaatgttgcattaatattctaaagtgacaattattttgag 27920927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 118 - 295
Target Start/End: Original strand, 29835390 - 29835566
Alignment:
Q  118 caatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttat 217  Q
    |||||||| |||||||||||||||||  | |||||| | |||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||    
T  29835390 caatattaatcgtttaaggtttgtgcgcgcttattaaggaaatgattaattatgttgatttaaatggtaaaattagtagcatttactaaaacactcttat 29835489  T
Q  218 taattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatg 295  Q
    |||||| |||||  ||||||||| |||||  || |||||||||| ||| | | ||||||||| | |||||||||||||    
T  29835490 taattgcagttaacggagtagtt-agttggatgtaattcaataaataaagatataatagtggaacaaaataataaatg 29835566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 128 - 330
Target Start/End: Complemental strand, 30866110 - 30865906
Alignment:
Q  128 cgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagt 227  Q
    ||||||||||||||||| ||||||||   ||||||||||||||||| |||||||||||| ||||| || |||||||||||| || |||||||||| || |    
T  30866110 cgtttaaggtttgtgcacgattattaaagaaatgattaattgtgttaatttcaatggtataattaatatcatttactaaaatactcttattaattataat 30866011  T
Q  228 tagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaa--ataataaatgctgcattggtattgtaaagtgagaattatt 325  Q
    ||||||||||||||||||   ||||||||||||| ||| | | ||||| || ||||||  || ||||||||||||||  |||| |||||||| ||| |||    
T  30866010 tagtggagtagttaagttagatgaaattcaataaataaagatataataatgagaaaaaagattataaatgctgcattaatattctaaagtgacaatcatt 30865911  T
Q  326 ttgag 330  Q
    |||||    
T  30865910 ttgag 30865906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 16904523 - 16904318
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||||||||  ||| ||| |||||||||||||||||||||||||||| ||||||||| || || || |||||| || | |||||||| |||    
T  16904523 tcgtttaaggtttgtgcaaaatttttaagaaaatgattaattgtgttgatttcaatagtaaaattattatcactttctaaaatactcgtattaattatag 16904424  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaa--aataataaatgctgcattggtattgtaaagtgagaattat 324  Q
    |||||| | || ||||||||  | ||||||||||| ||||||| ||||||||| ||||  |||||||||| || ||||| |||| ||||  || ||||||    
T  16904423 ttagtgaaataattaagttggatcaaattcaataaataagggtataatagtggaaaaaataataataaatactacattgatattctaaaaagacaattat 16904324  T
Q  325 tttgag 330  Q
    ||||||    
T  16904323 tttgag 16904318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 130 - 327
Target Start/End: Complemental strand, 13962100 - 13961905
Alignment:
Q  130 tttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtta 229  Q
    |||||||||| |||| | |||||| | |||||||||||||||||||||| |||| |||||||| || || ||| ||||| |  |||||||| ||||||||    
T  13962100 tttaaggtttatgcacgtttattaaggaaatgattaattgtgttgattttaatgataaaattaatatcacttaataaaatatccttattaagtgtagtta 13962001  T
Q  230 gtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
    |||||||||||||||||  ||||||| ||||| ||| | | |  || || ||||||| ||||||||||||||||||||| |||||||| |||||||||    
T  13962000 gtggagtagttaagttggatgaaatttaataaataatgatatccta-tgagaaaaaa-aataaatgctgcattggtattctaaagtgataattatttt 13961905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 157 - 317
Target Start/End: Original strand, 32018930 - 32019091
Alignment:
Q  157 aaatgattaattgtgttgatttc-aatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaatt 255  Q
    ||||||||||||||||||||||  ||| ||||||||  || |||||||||||| || |||||||||||| |||||||||||| ||||||||  |||||||    
T  32018930 aaatgattaattgtgttgattttgaatagtaaaatttctatcatttactaaaatactcttattaattgttgttagtggagtaattaagttggatgaaatt 32019029  T
Q  256 caataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtga 317  Q
     ||||| ||||||  ||||||||||||||||||||||||| || ||| |||||  |||||||    
T  32019030 taataaataagggattaatagtgggaaaaaataataaatgttgtattagtattcaaaagtga 32019091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 171 - 330
Target Start/End: Original strand, 6494963 - 6495121
Alignment:
Q  171 gttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtg 270  Q
    ||||||||  ||||||||||||||   ||||||||||||||  |||||||||||||||||||||||||| ||||||  ||||||| ||||| |||||||     
T  6494963 gttgattttgatggtaaaattagtgttatttactaaaacacttttattaattgtagttagtggagtagtaaagttggatgaaatttaataaataagggta 6495062  T
Q  271 taatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    ||||| | | |||||| |||||||||| ||||| |||| |||||||| ||||||||||||    
T  6495063 taataat-gaaaaaaaaaataaatgctacattgatattctaaagtgacaattattttgag 6495121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 192 - 330
Target Start/End: Complemental strand, 25571498 - 25571361
Alignment:
Q  192 agtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataata 291  Q
    |||| |||||||||||| || ||||||| |||||||||||||| |||||||||||  ||||||||||||| ||||||| ||||| |   |||||||||||    
T  25571498 agtatcatttactaaaatacccttattagttgtagttagtggaatagttaagttggatgaaattcaataaataagggtataataat-taaaaaaataata 25571400  T
Q  292 aatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    |||| |||||||||||| |||||||| ||||||||||||    
T  25571399 aatgttgcattggtattctaaagtgacaattattttgag 25571361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 202 - 330
Target Start/End: Complemental strand, 36790809 - 36790679
Alignment:
Q  202 actaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaa--aataataaatgctgc 299  Q
    |||||||||| ||||||||||||||||||| ||||||||| || |  ||||||||||||| ||||||| ||||| ||| ||||  |||||||||||||||    
T  36790809 actaaaacacccttattaattgtagttagttgagtagttatgtcggatgaaattcaataaataagggtataataatggaaaaaataataataaatgctgc 36790710  T
Q  300 attggtattgtaaagtgagaattattttgag 330  Q
    |||| |||| |||||||| ||||||||||||    
T  36790709 attgctattctaaagtgacaattattttgag 36790679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 44424279 - 44424086
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||  |||| | |||||| | ||||||||||||||||||||||  ||||||||||||    |||||||      || |||||||| |||||    
T  44424279 tcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattat---catttac------acccttattaaatgtag 44424189  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||||||||||| ||||||||  |||| |||||||| ||||||| | ||| ||  ||||||||||||||||||||||| |||| |||||||| ||||||||    
T  44424188 ttagtggagtaattaagttggatgaagttcaataaataagggtattataatga-aaaaaataataaatgctgcattgatattttaaagtgataattattt 44424090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 130 - 246
Target Start/End: Original strand, 16560558 - 16560674
Alignment:
Q  130 tttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtta 229  Q
    |||||| ||| |||| |||||||| | ||||||||||||||||| ||||  ||||||||| ||||| ||||||||||||||  |||||||||||||||||    
T  16560558 tttaagatttatgcacgattattaaggaaatgattaattgtgtttattttgatggtaaaactagtatcatttactaaaacatccttattaattgtagtta 16560657  T
Q  230 gtggagtagttaagttg 246  Q
    |||| ||||||||||||    
T  16560658 gtggggtagttaagttg 16560674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 130 - 246
Target Start/End: Complemental strand, 16605104 - 16604988
Alignment:
Q  130 tttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtta 229  Q
    |||||| ||| |||| |||||||| | ||||||||||||||||| ||||  ||||||||| ||||| ||||||||||||||  |||||||||||||||||    
T  16605104 tttaagatttatgcacgattattaaggaaatgattaattgtgtttattttgatggtaaaactagtatcatttactaaaacatccttattaattgtagtta 16605005  T
Q  230 gtggagtagttaagttg 246  Q
    |||| ||||||||||||    
T  16605004 gtggggtagttaagttg 16604988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 157 - 308
Target Start/End: Original strand, 32018727 - 32018879
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattc 256  Q
    |||||| ||||||||||||||||||| ||||||||  || |||||||||||| || |||||||||||| |||||| ||||| ||||||||  | |||||     
T  32018727 aaatgaataattgtgttgatttcaatagtaaaatttctatcatttactaaaatactcttattaattgtcgttagtagagtaattaagttggattaaattt 32018826  T
Q  257 aataagtaagggtgtaatagtggg-aaaaaataataaatgctgcattggtatt 308  Q
    ||||| ||||||  |||||||||| ||||||||||||||| || ||| |||||    
T  32018827 aataaataagggcttaatagtgggaaaaaaataataaatgttgtattagtatt 32018879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 175 - 325
Target Start/End: Original strand, 21937820 - 21937970
Alignment:
Q  175 atttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttga-ctgaaattcaataagtaagggtgtaa 273  Q
    |||| |||| ||||||||||  ||||||||||| ||| |||||||||||||||||||||||||||||| ||||  || |||| |||||  |||||||||     
T  21937820 attttaatgataaaattagtgtcatttactaaagcactcttattaattgtagttagtggagtagttaa-ttgaggtggaatttaataaacaagggtgtat 21937918  T
Q  274 tagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattatt 325  Q
    |||||||  |||||||||||||||||||||| ||| |||| ||| |||||||    
T  21937919 tagtgggggaaaataataaatgctgcattggcattctaaattgacaattatt 21937970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 130 - 261
Target Start/End: Complemental strand, 49101807 - 49101673
Alignment:
Q  130 tttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttacta---aaacacacttattaattgtag 226  Q
    ||||||||||||  | |||| ||| ||||||||||||||||||| |||| || | |||||||| || |||||||||   ||| || | ||||||||||||    
T  49101807 tttaaggtttgtttacgatttttaagaaaatgattaattgtgtttattttaaggataaaattaatatcatttactattaaaatactcatattaattgtag 49101708  T
Q  227 ttagtggagtagttaagttgactgaaattcaataa 261  Q
    ||||||||||||||||||||| |||||||||||||    
T  49101707 ttagtggagtagttaagttgaatgaaattcaataa 49101673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 127 - 330
Target Start/End: Original strand, 31930482 - 31930690
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||| |||| |||| ||||||||   |||||||| | ||||||||||| |||||||||| || |   ||||  ||||| || ||||||||||||||    
T  31930482 tcgtttaaagtttatgcacgattattaaagaaatgattgactgtgttgattttaatggtaaaactaatctaattttttaaaatacccttattaattgtag 31930581  T
Q  227 ttagtggagta--gttaagttgactgaaattcaataagtaagggtgt--aatagtgggaaaa-aataataaatgctgcattggtattgtaaagtgagaat 321  Q
    |||||||||||  ||||||||   ||||||||||||| |||| ||||  ||||  ||||||| ||||||||||| | ||||| |||| |||||||| |||    
T  31930582 ttagtggagtatagttaagtttgatgaaattcaataaataagagtgtttaataaagggaaaaaaataataaatgtttcattgatattctaaagtgacaat 31930681  T
Q  322 tattttgag 330  Q
    |||||||||    
T  31930682 tattttgag 31930690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 127 - 232
Target Start/End: Original strand, 2850866 - 2850971
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||| ||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| ||  ||||||||||| || || ||||||| |||    
T  2850866 tcgtttatggtttgtgcatgattattaaggaaatgattaattatgttgatttcaatgataaaattaatattatttactaaaataccctcattaattatag 2850965  T
Q  227 ttagtg 232  Q
    ||||||    
T  2850966 ttagtg 2850971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 130 - 231
Target Start/End: Complemental strand, 12631446 - 12631345
Alignment:
Q  130 tttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtta 229  Q
    ||||||||||||||| |||||||| | |||| ||||||||| ||||||||||| ||||||||||||| |||||  ||||||  |||||||||||||||||    
T  12631446 tttaaggtttgtgcacgattattaaggaaataattaattgtattgatttcaatagtaaaattagtagtatttatcaaaacatccttattaattgtagtta 12631347  T
Q  230 gt 231  Q
    ||    
T  12631346 gt 12631345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 127 - 208
Target Start/End: Complemental strand, 44180349 - 44180268
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaa 208  Q
    ||||||||||||| | || |||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  44180349 tcgtttaaggtttatacacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtataatttactaaaa 44180268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 127 - 308
Target Start/End: Original strand, 17828337 - 17828517
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||| ||||||||| ||| |||| | ||| ||||| || ||||||||||||||||||||||| || ||||||| |||  || ||||| ||||||||    
T  17828337 tcgtttaaagtttgtgcacgat-attaaggaaacgattatttttgttgatttcaatggtaaaattaatatcatttacaaaattactcttatcaattgtag 17828435  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtg-ggaaaaaataataaatgctgcattggtatt 308  Q
    ||||||||||| ||||||||  || |||||||||| ||| | | ||||| ||   ||||||||||||||||  ||||||||||    
T  17828436 ttagtggagtaattaagttggatg-aattcaataaataatgatataataatgaaaaaaaaataataaatgcaacattggtatt 17828517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 182 - 327
Target Start/End: Complemental strand, 24167080 - 24166934
Alignment:
Q  182 tggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtggga 281  Q
    ||||||||||| |   ||||||||||| || ||||||||| |||||||||| ||||||||  |||| |||||||||| || ||||||  ||| ||||  |    
T  24167080 tggtaaaattaatgttatttactaaaatacccttattaatagtagttagtgcagtagttacattgaatgaaattcaagaaataagggaataaaagtgaaa 24166981  T
Q  282 -aaaaataataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
     |||||||||||||  ||||||||||||||||||||| |||||||||    
T  24166980 taaaaataataaatattgcattggtattgtaaagtgacaattatttt 24166934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 30546368 - 30546482
Alignment:
Q  155 gaaaatgatta-attgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaa 253  Q
    ||||||||||| |||| ||||| |||||||| ||||||  |  || ||||||||||||  |||||||||||||||| |||||||||||||| || |||||    
T  30546368 gaaaatgattagattg-gttgagttcaatggaaaaattgatttcacttactaaaacacctttattaattgtagttattggagtagttaagtggagtgaaa 30546466  T
Q  254 ttcaataagtaagggt 269  Q
    |||||||| |||||||    
T  30546467 ttcaataaataagggt 30546482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 127 - 227
Target Start/End: Complemental strand, 46211575 - 46211472
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattag---tagcatttactaaaacacacttattaattg 223  Q
    ||||||||||||| ||||  ||||||| | ||||||||||||||||||||||  ||||||||| |||   || ||||||||||||||  |||||||||||    
T  46211575 tcgtttaaggtttatgcacaattattaaggaaatgattaattgtgttgattttgatggtaaaactagtactatcatttactaaaacatccttattaattg 46211476  T
Q  224 tagt 227  Q
    ||||    
T  46211475 tagt 46211472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 198 - 306
Target Start/End: Complemental strand, 46602123 - 46602014
Alignment:
Q  198 atttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaa-tagtgggaaaaaataataaatgc 296  Q
    |||||||||||||| |||||| ||||||||||||| ||||||| |||  | || |||| ||||| ||||||| ||| ||  ||||||||||||||||||     
T  46602123 atttactaaaacacccttattcattgtagttagtgcagtagtttagtgcagtggaattgaataaataagggtataattatggggaaaaaataataaatgt 46602024  T
Q  297 tgcattggta 306  Q
    ||||||||||    
T  46602023 tgcattggta 46602014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 313
Target Start/End: Complemental strand, 29121617 - 29121462
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattc 256  Q
    ||||||| |||  ||||||||| |||||||||||  ||   |||||||||||||| || ||||||| | ||||||||||||||| || ||| |||||| |    
T  29121617 aaatgatcaatattgttgattttaatggtaaaatatgtctaatttactaaaacaccctcattaattattgttagtggagtagtt-agatgattgaaatgc 29121519  T
Q  257 aataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaa 313  Q
    ||||| ||||| | |  |||||| |||||||| |||||| || ||| ||||||||||    
T  29121518 aataaataaggttatgttagtggaaaaaaatagtaaatgttgtattagtattgtaaa 29121462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 42796094 - 42796039
Alignment:
Q  185 taaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagtt 240  Q
    ||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||    
T  42796094 taaaattagtaacatttattaaaacacccttattaattgtagttagtggagtagtt 42796039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 259
Target Start/End: Complemental strand, 39005535 - 39005433
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattc 256  Q
    |||| |||| ||| |||||||  |||||||||||||||| |||||||||||| ||  ||| |||||||||||||| || || ||||||| | ||||||||    
T  39005535 aaattattagttgagttgattaaaatggtaaaattagtatcatttactaaaatacctttaataattgtagttagtagattaattaagttaagtgaaattc 39005436  T
Q  257 aat 259  Q
    |||    
T  39005435 aat 39005433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 47045469 - 47045538
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagt 227  Q
    ||||||||||||| ||||||||||||| ||||||||||| ||||| |||||| || |||||||||||||||    
T  47045469 aaatgattaattgagttgatttcaatg-taaaattagtatcatttcctaaaatacccttattaattgtagt 47045538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 148 - 241
Target Start/End: Complemental strand, 7930176 - 7930083
Alignment:
Q  148 ttattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagtta 241  Q
    |||||| ||||||||||| | |||||||||||||||| |||||  |   ||||||||||||||| |||||||||| ||||||||| | ||||||    
T  7930176 ttattaagaaaatgattagtagtgttgatttcaatggaaaaatatggttcatttactaaaacacccttattaattatagttagtgaaatagtta 7930083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 258
Target Start/End: Complemental strand, 35333151 - 35333056
Alignment:
Q  163 ttaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaa 258  Q
    ||||||||||||||||||||  || ||||| ||  ||||| ||||| |   ||||||||||||||||||||||||||||||||   ||||||||||    
T  35333151 ttaattgtgttgatttcaattatataattaatattatttattaaaatattattattaattgtagttagtggagtagttaagttagatgaaattcaa 35333056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 217 - 330
Target Start/End: Original strand, 47045546 - 47045653
Alignment:
Q  217 ttaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtg 316  Q
    |||||||| ||||||| |||||||||||||  |||||||||| || |||| || ||||||||| ||||      ||| | |||||||||||| |||||||    
T  47045546 ttaattgtggttagtgtagtagttaagttggatgaaattcaacaaataagagtataatagtggaaaaa------aaaagttgcattggtattctaaagtg 47045639  T
Q  317 agaattattttgag 330  Q
    | ||||||||||||    
T  47045640 acaattattttgag 47045653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 317
Target Start/End: Complemental strand, 37490422 - 37490329
Alignment:
Q  224 tagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtga 317  Q
    |||||||||||||| |||| |||| ||||||||||||| |||| |  || ||||   ||| ||||||||||| |||||||||||| ||||||||    
T  37490422 tagttagtggagtaattaaattgaatgaaattcaataaataagagcatactagtaaaaaataataataaatgttgcattggtattttaaagtga 37490329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 17610567 - 17610691
Alignment:
Q  171 gttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtg 270  Q
    |||||||| ||||||||||||||||  ||||| ||||| |  |||||||||| || |||||| | ||||||| | || ||||||||||||| || || |     
T  17610567 gttgattttaatggtaaaattagtataatttattaaaatattcttattaattttaattagtgaaatagttaattagagtgaaattcaataaatagggata 17610666  T
Q  271 taatagtgggaaaaaataataaatg 295  Q
    || |||||| |||||  ||||||||    
T  17610667 tattagtggaaaaaataaataaatg 17610691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 154 - 241
Target Start/End: Complemental strand, 762274 - 762187
Alignment:
Q  154 tgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagtta 241  Q
    |||||||||||| | ||||| |||| |||| ||||||  ||  |||||||||||||||||||||||||  |||||  |||||||||||    
T  762274 tgaaaatgattagtagtgttaattttaatgataaaatgtgttacatttactaaaacacacttattaatcatagttcatggagtagtta 762187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 31665730 - 31665817
Alignment:
Q  156 aaaatgattaattgtgttgatttcaatggtaaaattagtag-catttactaaaacacacttattaattgtagttagtggagtagttaa 242  Q
    ||||| |||| |||||||||||| ||||||||||||| |   |||||||||||| | | |||||||| ||||||||| ||||||||||    
T  31665730 aaaataattagttgtgttgattttaatggtaaaattaattttcatttactaaaatatatttattaatagtagttagtagagtagttaa 31665817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 39452445 - 39452390
Alignment:
Q  170 tgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgta 225  Q
    ||||||||| ||||||||||||| || |||||||||||| || |||||||||||||    
T  39452445 tgttgattttaatggtaaaattaatatcatttactaaaatacccttattaattgta 39452390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 222
Target Start/End: Original strand, 25531004 - 25531070
Alignment:
Q  156 aaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaatt 222  Q
    |||||||||||| |||||||||| ||||| |||||  | | ||||||||||||||| ||||||||||    
T  25531004 aaaatgattaatagtgttgattttaatggcaaaatgtgcatcatttactaaaacactcttattaatt 25531070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 4958598 - 4958650
Alignment:
Q  130 tttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaat 182  Q
    |||||||||||||||| ||| ||| |||||||| ||||| |||||||||||||    
T  4958598 tttaaggtttgtgcataatttttaagaaaatgaataattatgttgatttcaat 4958650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 329
Target Start/End: Complemental strand, 10042371 - 10042223
Alignment:
Q  181 atggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtggg 280  Q
    |||||||| ||| || |||||| ||||| |  |||||||||| || ||| ||||||||||||||  | |  || ||||||| |||| || ||  |||| |    
T  10042371 atggtaaacttaatatcatttattaaaatattcttattaattataattattggagtagttaagtaaaatagaactcaataaataagagtatatcagtgag 10042272  T
Q  281 aaaaaataataaatgctgcattggtattgtaaagtgagaattattttga 329  Q
    ||||||||||||| | ||||||| |||| |||| |||  ||||||||||    
T  10042271 aaaaaataataaacgatgcattgatattctaaaatgaagattattttga 10042223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 33819136 - 33819104
Alignment:
Q  346 taaagagacaataattgtgagacggagggagta 378  Q
    |||||||||||||||||||||||||||||||||    
T  33819136 taaagagacaataattgtgagacggagggagta 33819104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 378
Target Start/End: Complemental strand, 26973955 - 26973920
Alignment:
Q  343 tgctaaagagacaataattgtgagacggagggagta 378  Q
    ||||||||||||||| ||||||||||||||||||||    
T  26973955 tgctaaagagacaattattgtgagacggagggagta 26973920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 15464790 - 15464720
Alignment:
Q  159 atgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtta 229  Q
    ||||||||| |||||||||| |||||||||||  ||| |||||||||||  || ||| |||||| ||||||    
T  15464790 atgattaatagtgttgattttaatggtaaaatgtgtatcatttactaaagtactcttgttaattatagtta 15464720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 327
Target Start/End: Complemental strand, 39519454 - 39519288
Alignment:
Q  162 attaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataa 261  Q
    |||| |||||||  ||| ||| ||||||||||||  | | ||| |||||| ||||||||  ||| || ||||| ||||||| | || |||||||||||||    
T  39519454 attagttgtgtttgttttaatagtaaaattagtattaatcacttaaacactcttattaagcgtaatttgtggactagttaaatcgagtgaaattcaataa 39519355  T
Q  262 gtaagggtgtaatagtgggaa-aaaataataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
     ||| | | || | ||||||| ||||||| ||||  || |||| |||| |||||||| |||||||||    
T  39519354 ataaagttatatttgtgggaaaaaaataacaaatattgtattgatattctaaagtgataattatttt 39519288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 329
Target Start/End: Original strand, 2851114 - 2851213
Alignment:
Q  231 tggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataa--taaatgctgcattggtattgtaaagtgagaattattttg 328  Q
    ||||||||||||||||| | ||||||| ||| ||||| | ||||| ||| || ||| ||  |||||| | ||||| ||||||||||||| ||||||||||    
T  2851114 tggagtagttaagttgaattaaattcattaaataagg-tataataatggaaagaaaaaaattaaatgttacattgttattgtaaagtgaaaattattttg 2851212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 27556975 - 27557048
Alignment:
Q  148 ttattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaat 221  Q
    |||||| | ||||||||| |  ||||||||| ||||| |||||  ||| ||||||||||||||| |||||||||    
T  27556975 ttattaaggaaatgattactgatgttgattttaatggcaaaatgtgtatcatttactaaaacactcttattaat 27557048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 379
Target Start/End: Original strand, 29835567 - 29835692
Alignment:
Q  254 ttcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgagnnnnnnnnnnnntgctaaagaga 353  Q
    |||||||| ||| | | ||||||||| | ||||||||||||| ||||||||||  |||||   | ||||||||||||            |||||||| ||    
T  29835567 ttcaataaataaagatataatagtggaacaaaataataaatgttgcattggtaccgtaaaacaacaattattttgagaaaaagataaaatgctaaagcga 29835666  T
Q  354 caataattgtgagacggagggagtat 379  Q
    ||||||||||||||||||| ||||||    
T  29835667 caataattgtgagacggagtgagtat 29835692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 380
Target Start/End: Complemental strand, 34947427 - 34947390
Alignment:
Q  343 tgctaaagagacaataattgtgagacggagggagtata 380  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  34947427 tgctaaagagacaaatattgtgagacggagggagtata 34947390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 3178405 - 3178437
Alignment:
Q  346 taaagagacaataattgtgagacggagggagta 378  Q
    |||||||||||| ||||||||||||||||||||    
T  3178405 taaagagacaattattgtgagacggagggagta 3178437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 162; Significance: 2e-86; HSPs: 79)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 115 - 379
Target Start/End: Original strand, 43253829 - 43254094
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||  |||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  43253829 tcacaatattgatcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacaccct 43253928  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaa-taataaatgctgcattggtattgtaaa 313  Q
    |||||||||||||||||||||||||||||| |  ||||||||| ||| ||||||| ||||||||| |||||| ||||||||| |||||||||||||||||    
T  43253929 tattaattgtagttagtggagtagttaagtgggatgaaattcattaaataagggtataatagtggaaaaaaactaataaatgttgcattggtattgtaaa 43254028  T
Q  314 gtgagaattattttgagnnnnnnnnnnnntgctaaagagacaataattgtgagacggagggagtat 379  Q
    |||| ||||||||||||            |||||||||||||||||||||||||||||||||||||    
T  43254029 gtgacaattattttgagaaatagaaaaaatgctaaagagacaataattgtgagacggagggagtat 43254094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 115 - 380
Target Start/End: Complemental strand, 27471484 - 27471219
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    |||||| |||| ||||||||| |||||||| |||||||| |||||||||||||| |||||||||||||||| |||||||| |||||||||||||||| ||    
T  27471484 tcacaacattaatcgtttaagatttgtgcacgattattaagaaaatgattaattatgttgatttcaatggtgaaattagttgcatttactaaaacactct 27471385  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaag 314  Q
    |||||||| ||  |||||||||||||||||||| ||||||||||||| ||| ||| |  ||||||  ||||||||||||||||| ||||||||| |||||    
T  27471384 tattaattataagtagtggagtagttaagttgaatgaaattcaataaataaaggtatggtagtggacaaaaataataaatgctgtattggtattataaag 27471285  T
Q  315 tgagaattattttgagnnnnnnnnnnnntgctaaagagacaataattgtgagacggagggagtata 380  Q
    ||| ||||||||||||            ||||||||||||||||||||||||||||||||| ||||    
T  27471284 tgacaattattttgagaaaaagaaaaaatgctaaagagacaataattgtgagacggagggattata 27471219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 115 - 327
Target Start/End: Complemental strand, 37312099 - 37311886
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| ||||||||||||| |||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  37312099 tcacaatattagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaaaaccct 37312000  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaa-aataataaatgctgcattggtattgtaaa 313  Q
    |||||||||||||||||||||||||||| || | ||||||||||||| |||| || ||||| | | |||| ||||||||||||||||||| |||||||||    
T  37311999 tattaattgtagttagtggagtagttaaatttaatgaaattcaataaataagagtataataatagaaaaataataataaatgctgcattgatattgtaaa 37311900  T
Q  314 gtgagaattatttt 327  Q
    |||| |||||||||    
T  37311899 gtgacaattatttt 37311886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 127 - 330
Target Start/End: Original strand, 10366620 - 10366830
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttat-------ta 219  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||       ||    
T  10366620 tcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtatcatttattaaaacactcttattaattatta 10366719  T
Q  220 attgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgaga 319  Q
    ||||||||||||| |||||||||||||  ||||||||||||| ||||||| ||||| ||||||||||||||||||| |||||||||||| |||||||| |    
T  10366720 attgtagttagtgaagtagttaagttggatgaaattcaataaataagggtataataatgggaaaaaataataaatgttgcattggtattctaaagtgaca 10366819  T
Q  320 attattttgag 330  Q
    |||||||||||    
T  10366820 attattttgag 10366830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 128 - 371
Target Start/End: Original strand, 37772943 - 37773188
Alignment:
Q  128 cgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagt 227  Q
    |||||||||||||||||||||||||| | |||||||||||||| |||||| |||||||||||||| || |||||||||||| || |||||||||| ||||    
T  37772943 cgtttaaggtttgtgcatgattattaaggaaatgattaattgtattgattacaatggtaaaattaatatcatttactaaaatacccttattaattatagt 37773042  T
Q  228 tagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaat--aataaatgctgcattggtattgtaaagtgagaattatt 325  Q
     |||||| |||||||||||| ||||||||| ||| ||||||| ||||| ||| |||||||  |||||||||||||||||||||||||||||| |||||||    
T  37773043 cagtggaatagttaagttgaatgaaattcattaaataagggtataataatggaaaaaaataaaataaatgctgcattggtattgtaaagtgacaattatt 37773142  T
Q  326 ttgagnnnnnnnnnnnntgctaaagagacaataattgtgagacgga 371  Q
    |||||            ||||||||||||||| |||||||||||||    
T  37773143 ttgagaaaaagaaaaattgctaaagagacaattattgtgagacgga 37773188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 127 - 317
Target Start/End: Original strand, 37695643 - 37695835
Alignment:
Q  127 tcgtttaaggttt-gtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgta 225  Q
    ||||||||||||| ||||| |||||||| | |||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||    
T  37695643 tcgtttaaggttttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattaatatcatttactaaaacacccttattaattgta 37695742  T
Q  226 gttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgg-gaaaaaataataaatgctgcattggtattgtaaagtga 317  Q
    ||||||||||||||||||||   ||||||||||||| ||||||| ||||| |||  ||||||||||||||| |||||||||||| ||||||||    
T  37695743 gttagtggagtagttaagttagatgaaattcaataaataagggtataataatggaaaaaaaataataaatgttgcattggtattctaaagtga 37695835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 129 - 330
Target Start/End: Complemental strand, 19823146 - 19822945
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    |||||||||||||||| |||||||| | ||||||||||||||||||||||  |||||| |||||||| ||||||||||||||| ||||||||||||||||    
T  19823146 gtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgattttgatggtagaattagtatcatttactaaaacacccttattaattgtagtt 19823047  T
Q  229 agtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgt-aaagtgagaattatttt 327  Q
    |||||| |||||||||||  ||||||||||||| ||||||| || || | | |||||||||||||||||||||||||||| | ||||||| |||||||||    
T  19823046 agtggaatagttaagttggatgaaattcaataaataagggtatattaat-gaaaaaaataataaatgctgcattggtattctaaaagtgacaattatttt 19822948  T
Q  328 gag 330  Q
    |||    
T  19822947 gag 19822945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 117 - 330
Target Start/End: Original strand, 36460384 - 36460597
Alignment:
Q  117 acaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacactta 216  Q
    ||||||||| |||||||| ||||||||| |||||||| |||||| |||||||||||| |||||||| |||||||||||| |||||| ||||| |  ||||    
T  36460384 acaatattagtcgtttaaagtttgtgcacgattattaagaaaattattaattgtgttaatttcaatagtaaaattagtaacatttattaaaatattctta 36460483  T
Q  217 ttaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtg 316  Q
    ||||||||||||| ||||||| ||||||||  ||||||||||||| ||||||| ||||||||| || |||||||||||  ||||||| ||| ||||||||    
T  36460484 ttaattgtagttaatggagtaattaagttggatgaaattcaataaataagggtataatagtggaaacaaataataaatattgcattgatatcgtaaagtg 36460583  T
Q  317 agaattattttgag 330  Q
    | ||||||||||||    
T  36460584 acaattattttgag 36460597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 129 - 330
Target Start/End: Complemental strand, 36476719 - 36476518
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    ||||||||||||| || | |||||| |||||| ||| |||||||||||| |||||||||||||| || |||||||||||| || ||||||||||||||||    
T  36476719 gtttaaggtttgttcacggttattaagaaaataattgattgtgttgattgcaatggtaaaattaatatcatttactaaaatacccttattaattgtagtt 36476620  T
Q  229 agtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttg 328  Q
    ||| |||||||||||||   ||||||||||||| ||||||| ||||| | | ||||| |||||||||||||||||||||| |||||||| ||||||||||    
T  36476619 agtagagtagttaagtttgatgaaattcaataaataagggtataataatagaaaaaagtaataaatgctgcattggtattctaaagtgacaattattttg 36476520  T
Q  329 ag 330  Q
    ||    
T  36476519 ag 36476518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 130 - 330
Target Start/End: Original strand, 51837940 - 51838141
Alignment:
Q  130 tttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtta 229  Q
    |||||||||||||||||| ||||| | ||||||||||||||||||||||||||| |||||||| || |||||||||||| || ||||||| |||||| ||    
T  51837940 tttaaggtttgtgcatgagtattaagtaaatgattaattgtgttgatttcaatgataaaattaatatcatttactaaaatacccttattagttgtagcta 51838039  T
Q  230 gtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgg-gaaaaaataataaatgctgcattggtattgtaaagtgagaattattttg 328  Q
    |||||||||||| ||||| ||||||||| ||| ||||||| |||||||||  ||||||||||||||| ||||||   |||||||||||| ||||||||||    
T  51838040 gtggagtagttacgttgaatgaaattcattaaataagggtataatagtggaaaaaaaataataaatgttgcattataattgtaaagtgacaattattttg 51838139  T
Q  329 ag 330  Q
    ||    
T  51838140 ag 51838141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 127 - 330
Target Start/End: Original strand, 30190638 - 30190841
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||||||||||||| | |||| | | ||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||    
T  30190638 tcgtttaaggtttgtgcacggttatgaaggaaatgattaattgtgttgatttcaatggtaaaattagtatcatttactaaaatacccttattaattgtag 30190737  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||||||||||||||||||||  ||||||||||| | |||||||  |||| ||| ||  ||||||||||| | ||||  |||| |||||||| ||||||||    
T  30190738 ttagtggagtagttaagttggatgaaattcaattaataagggtaaaataatggaaattaataataaatgttacatttttattctaaagtgacaattattt 30190837  T
Q  327 tgag 330  Q
    ||||    
T  30190838 tgag 30190841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 115 - 305
Target Start/End: Original strand, 23004349 - 23004537
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| |||||||||||||||   | ||||||| | |||||||||||||||| ||||||||||||||||||||||| || ||||||||||| ||    
T  23004349 tcacaatattagtcgtttaaggtttgttact-attattaaggaaatgattaattgtgtcgatttcaatggtaaaattagtagtatatactaaaacaccct 23004447  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggt 305  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||| ||| | |||||| || |||||||||||||||    
T  23004448 tattaattgtagttagtggagtagttaagttgtatgaaattcaataaataagggtgtaaaagt-gaaaaaaaaaaaaaatgctgcattggt 23004537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 127 - 312
Target Start/End: Original strand, 8679032 - 8679216
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||| ||| |||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||| |||    
T  8679032 tcgtttaagatttatgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaagatccttattaattatag 8679131  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaa 312  Q
    |||||| | || ||||||||  ||||||||||||| ||||||| ||||||| ||||||||||||||||| |||||| || ||||||    
T  8679132 ttagtgaattaattaagttggatgaaattcaataaataagggtataatagt-ggaaaaaataataaatgatgcatttgttttgtaa 8679216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 115 - 329
Target Start/End: Complemental strand, 3313399 - 3313187
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||||||    ||| ||||||||||||||||||||||| ||| |||||||||| ||    
T  3313399 tcacaatattagtcgtttaaggtttgtgcacgattattaagaaaatgatta----tgtcgatttcaatggtaaaattagtagaattaactaaaacaccct 3313304  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtggga--aaaaataataaatgctgcattggtattgtaa 312  Q
    ||||||||||||||| ||||||| ||||||||  ||||||||||||| ||||  | ||||| ||  |  || ||||||||||||||||||  ||||||||    
T  3313303 tattaattgtagttaatggagtatttaagttggatgaaattcaataaataagattataataatgaaaataataataataaatgctgcatttatattgtaa 3313204  T
Q  313 agtgagaattattttga 329  Q
    ||||| |||||||||||    
T  3313203 agtgacaattattttga 3313187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 129 - 330
Target Start/End: Complemental strand, 53560352 - 53560150
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    ||||||||||  |||| ||| |||| | |||||||||||| |||||||||  ||||||||||| ||| ||||||||||||||| |||||||| | |||||    
T  53560352 gtttaaggttgatgcacgatgattaaggaaatgattaattatgttgattttgatggtaaaatttgtatcatttactaaaacacccttattaaatatagtt 53560253  T
Q  229 agtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaat-aataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
    ||| ||||||||||||||| |||| |||||||| ||||||||| ||| ||| ||||||| ||||||||||||||| ||||| |||||||| |||||||||    
T  53560252 agtagagtagttaagttgaatgaagttcaataaataagggtgttataatggaaaaaaataaataaatgctgcattagtattctaaagtgacaattatttt 53560153  T
Q  328 gag 330  Q
    |||    
T  53560152 gag 53560150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 115 - 275
Target Start/End: Complemental strand, 1778791 - 1778632
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| |  ||||||||||||||  ||    
T  1778791 tcacaatattagtcgtttaaggtttgtgcatgattattaaggaaatgattaattgtgttgatttcaatgataaaattaatgacatttactaaaacatcct 1778692  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaata 275  Q
    |||| ||||||||||||||||||| |||||||  ||||||||||||| ||||||| |||||    
T  1778691 tatt-attgtagttagtggagtagataagttggatgaaattcaataaataagggtataata 1778632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 167 - 326
Target Start/End: Original strand, 39043772 - 39043932
Alignment:
Q  167 ttgtgttgatttcaatggtaaaattagtag---catttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagt 263  Q
    |||||||||||||||||||||||||| |||   |||||||||||| ||  |||||||||||||||||||||||||||||||||| ||||||||||||| |    
T  39043772 ttgtgttgatttcaatggtaaaattaatagtatcatttactaaaatacctttattaattgtagttagtggagtagttaagttgaatgaaattcaataaat 39043871  T
Q  264 aagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    |||||| ||||| |  |||||||||||||||| |||||||||||| |||||||| ||||||||    
T  39043872 aagggtataataat--gaaaaaataataaatgttgcattggtattctaaagtgacaattattt 39043932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 119 - 327
Target Start/End: Complemental strand, 11905967 - 11905760
Alignment:
Q  119 aatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttatt 218  Q
    |||| ||||||||||| |||| |||| |||||||| ||||||||||||||||||| ||||  ||| ||||||||||| ||||||||||| ||| ||||||    
T  11905967 aataatactcgtttaaagtttatgcacgattattaagaaaatgattaattgtgttaattttgatgataaaattagtatcatttactaaagcacccttatt 11905868  T
Q  219 aattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgag 318  Q
    ||||||||||| |||||| |||||||||  ||||||||||||| ||| | | ||||| | ||||||||||||||||| ||||||| |||| |||| | |     
T  11905867 aattgtagttaatggagttgttaagttggatgaaattcaataaataaagatataataat-ggaaaaaataataaatgttgcattgatattctaaaataaa 11905769  T
Q  319 aattatttt 327  Q
    |||||||||    
T  11905768 aattatttt 11905760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 127 - 327
Target Start/End: Original strand, 29023944 - 29024138
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||| |||| ||||||||  |||||||||||||||||||||||  ||||||||||||||| ||||||||||||||  ||||||||||||||    
T  29023944 tcgtttaaggtttatgcacgattattaaaaaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaaca-tcttattaattgtag 29024042  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||||||||||| ||||||||  ||||||||||||| ||| ||| ||||| ||| |||||     ||||||| ||||| |||| |||||||| ||||||||    
T  29024043 ttagtggagtaattaagttggatgaaattcaataaataatggtataataatggaaaaaa-----aaatgctacattgatattctaaagtgacaattattt 29024137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 37497629 - 37497425
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||| ||| |||| |||||||| | |||||||| |||||||||||||  ||||||||||||||| |||||||||||||||  || |||| |||||    
T  37497629 tcgtttaagatttatgcacgattattaaggaaatgatttattgtgttgattttgatggtaaaattagtatcatttactaaaacaccgttgttaactgtag 37497530  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaa-aataataaatgctgcattggtattgtaaagtgagaattatt 325  Q
    ||||||||||||||||||||  ||||||||||||| |||  || ||||| ||  |||| ||||||||||| || ||||||||| |||||||| |||||||    
T  37497529 ttagtggagtagttaagttggatgaaattcaataaataaacgtataataatgaaaaaataataataaatgttgtattggtattataaagtgacaattatt 37497430  T
Q  326 ttgag 330  Q
    |||||    
T  37497429 ttgag 37497425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 44301699 - 44301495
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||||||||||||  || | ||| | ||||  |||||| |||||||||||||| ||||||||||| |||||||||||| || ||||| |||||||     
T  44301699 tcgtttaaggtttgtgcccgacttttaaggaaatatttaattatgttgatttcaatgataaaattagtatcatttactaaaatacccttatcaattgtaa 44301600  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaa-aataataaatgctgcattggtattgtaaagtgagaattatt 325  Q
    ||||||||||||||||||||  ||||||||||||| |||| || ||||||||| |||| | ||||||||| ||||||| |||| |||||||| |||||||    
T  44301599 ttagtggagtagttaagttggatgaaattcaataaataagagtataatagtggaaaaatattaataaatgttgcattgatattataaagtgacaattatt 44301500  T
Q  326 ttgag 330  Q
    |||||    
T  44301499 ttgag 44301495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 119 - 294
Target Start/End: Complemental strand, 11632225 - 11632053
Alignment:
Q  119 aatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttatt 218  Q
    ||||||| || |||||| |||||||| ||||||||  |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||  |||||    
T  11632225 aatattagtcatttaagatttgtgcacgattattaa-aaaatgattaattgtgttgatttcaacggtaaaattagtagtatttactaaaacacctttatt 11632127  T
Q  219 aattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaat 294  Q
    ||||||||||||||||  ||||||||||  ||||||||||||| |||  || |||||||  |||||||||||||||    
T  11632126 aattgtagttagtggaaaagttaagttggatgaaattcaataaataaaagtataatagt--gaaaaaataataaat 11632053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 131 - 329
Target Start/End: Original strand, 24569082 - 24569276
Alignment:
Q  131 ttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttag 230  Q
    ||||| ||| |||| |||||||| |||||||||||||||||||||||||||||||||||||| ||  ||||||||||| || ||||||||||||||||||    
T  24569082 ttaagatttatgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattaatattatttactaaaatacccttattaattgtagttag 24569181  T
Q  231 tggagtagttaagttgactgaaattcaataagt-aagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttga 329  Q
    ||||||||||||||||| ||||||||| ||| | |||||| ||| |     | |||  ||||||||   ||||||||||||||||||| |||||||||||    
T  24569182 tggagtagttaagttgaatgaaattcattaaatgaagggtataaaa-----ataaataaataaatgtcacattggtattgtaaagtgacaattattttga 24569276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 127 - 324
Target Start/End: Complemental strand, 52291030 - 52290834
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||  || | | |||||| |||||||||||||||| |||||||  ||||||||||||||| |||||| |||||||  |||||||||| |||    
T  52291030 tcgtttaaggttgatgtacggttattaagaaaatgattaattgtattgattttgatggtaaaattagtaccatttattaaaacagccttattaattatag 52290931  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattat 324  Q
    ||||||||||||||||||||| | || |||||||| ||||| | | ||| | | |||||||||||||||||||||||||||| |||||| | ||||||    
T  52290930 ttagtggagtagttaagttgaataaagttcaataaataaggatattataat-gtaaaaaataataaatgctgcattggtattctaaagtcacaattat 52290834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 155 - 330
Target Start/End: Original strand, 3901155 - 3901330
Alignment:
Q  155 gaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaat 254  Q
    |||||||||||||||| || ||||||||| |||||||| || ||||||||||||||  ||||||| ||||||||||||| ||| ||||||||  ||||||    
T  3901155 gaaaatgattaattgtattaatttcaatgataaaattaatatcatttactaaaacattcttattagttgtagttagtggggtacttaagttggatgaaat 3901254  T
Q  255 tcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    ||||||| ||||||| ||||| ||| ||||||||||||||| | ||||||||||  | ||| | ||||||||||||    
T  3901255 tcaataaataagggtataataatggaaaaaaataataaatgttacattggtattcaagagtaacaattattttgag 3901330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 109 - 330
Target Start/End: Complemental strand, 38795499 - 38795278
Alignment:
Q  109 tccatttcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaa 208  Q
    ||||| ||| |||| || |||||||| ||||||||| |||  ||| | ||||||||||||||||| ||||||||||||||||||||| |||||||  |||    
T  38795499 tccatctcaaaataatagtcgtttaatgtttgtgcacgatatttaaggaaatgattaattgtgtttatttcaatggtaaaattagtatcatttacccaaa 38795400  T
Q  209 cacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtatt 308  Q
      | |||||||||||||||| ||||||| |||||||||  ||||||| |||||  |||||  ||||||||| ||| || |  ||||  ||||||||||||    
T  38795399 tgcccttattaattgtagttggtggagttgttaagttggatgaaatttaataaaaaagggcataatagtggaaaataaaataaaatattgcattggtatt 38795300  T
Q  309 gtaaagtgagaattattttgag 330  Q
     |||||||| ||||||||||||    
T  38795299 ctaaagtgacaattattttgag 38795278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 45710987 - 45710783
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||  |||| | || ||| |||||||||||||| |||||||||  |||||||||||| || |||||||||||||||  |||||||||||||    
T  45710987 tcgtttaaggttgatgcacggttgttaagaaaatgattaattatgttgattttgatggtaaaattaatatcatttactaaaacacttttattaattgtag 45710888  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaata-ataaatgctgcattggtattgtaaagtgagaattatt 325  Q
    ||||||||||||||||||||  |||| |||||||| ||||||||| ||  ||  |||||| | | ||||  || ||||||||| |||||||| |||||||    
T  45710887 ttagtggagtagttaagttggatgaagttcaataaataagggtgttattatgaaaaaaaaaataaaaatattgtattggtattataaagtgacaattatt 45710788  T
Q  326 ttgag 330  Q
    |||||    
T  45710787 ttgag 45710783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 131 - 330
Target Start/End: Complemental strand, 54726618 - 54726419
Alignment:
Q  131 ttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttag 230  Q
    ||||||||  |||| | |||||| |||||||||||| |||||||||||  |||||||||||| || ||||||||||||||   ||||||||||||||||     
T  54726618 ttaaggttgatgcacggttattaagaaaatgattaaatgtgttgattttgatggtaaaattaatatcatttactaaaacatctttattaattgtagttaa 54726519  T
Q  231 tggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    |||||||||||||||   |||| || ||||| ||||||| | ||| ||||||||| ||||||||| |||||| ||||| ||||||   ||||||||||||    
T  54726518 tggagtagttaagttagatgaagtttaataaataagggtattataatgggaaaaactaataaatgttgcattagtattctaaagttgcaattattttgag 54726419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 17652885 - 17652687
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||| |||||| |||| |||||||| | ||||||||||||||||||||||  ||||||||| |||||    |||||||||||  ||||||||||||||    
T  17652885 tcgtttgaggtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaactagta----ttactaaaacatccttattaattgtag 17652790  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||||||  ||||||||||||  ||||||| ||||| ||||||| ||||| |  |||||||| |||||| |||||||  |||| |||||||| ||||||||    
T  17652789 ttagtgaggtagttaagttggatgaaatttaataaataagggtataataat-tgaaaaaattataaatactgcattaatattctaaagtgacaattattt 17652691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 129 - 330
Target Start/End: Original strand, 12736552 - 12736752
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    |||||| ||||||||| |||| ||| | |||||||||||||||||||||  |||| ||||||||||| ||||||||| || || ||||||||||||| ||    
T  12736552 gtttaaagtttgtgcacgatttttaaggaaatgattaattgtgttgattctaatgataaaattagtatcatttactacaatacccttattaattgtactt 12736651  T
Q  229 agtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttg 328  Q
    |||| ||||||||| |||  | ||||||||||| ||||||| ||||||| | ||| |||||||||| ||  ||||  ||| |||||||| ||||||||||    
T  12736652 agtgtagtagttaatttggataaaattcaataaataagggtataatagt-gaaaacaataataaatactagattgacattctaaagtgacaattattttg 12736750  T
Q  329 ag 330  Q
    ||    
T  12736751 ag 12736752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 129 - 300
Target Start/End: Original strand, 5322919 - 5323088
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    |||||||||||||||| ||||||||  ||||||||||||| ||||||||||| || |||||||| || |||||||||||| ||||||||||||| || ||    
T  5322919 gtttaaggtttgtgcacgattatta--aaaatgattaattatgttgatttcagtgataaaattaatatcatttactaaaatacacttattaattataatt 5323016  T
Q  229 agtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgca 300  Q
    |||  ||||||||||||   ||||||||||||| ||||||| ||||| ||| ||||  |||||||| |||||    
T  5323017 agtaaagtagttaagtttgatgaaattcaataaataagggtataataatggaaaaaggtaataaatactgca 5323088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 119 - 330
Target Start/End: Original strand, 31158492 - 31158691
Alignment:
Q  119 aatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttatt 218  Q
    ||||||| |||||||||||||||||| ||||||||  |||||||||||||||| ||||||| || ||||||||| || ||||||||||||||| | ||||    
T  31158492 aatattagtcgtttaaggtttgtgcacgattattaa-aaaatgattaattgtgctgatttcgatagtaaaattaataacatttactaaaacactcctatt 31158590  T
Q  219 aattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgag 318  Q
    | ||          || ||||||||||   ||||||||||||| ||| ||| ||||||| | |||||||||||||| ||||||| |||||||||||||||    
T  31158591 attt----------gaatagttaagttagatgaaattcaataaataatggtataatagt-gaaaaaaataataaatactgcatttgtattgtaaagtgag 31158679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 119 - 329
Target Start/End: Original strand, 38137413 - 38137626
Alignment:
Q  119 aatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtag---catttactaaaacacactt 215  Q
    ||||||| ||||||||||||||||||||||||| |   |||| ||| ||||||| ||||||||| ||||||||||||    ||| |||||||| |  |||    
T  38137413 aatattagtcgtttaaggtttgtgcatgattataaatgaaataattcattgtgtcgatttcaatagtaaaattagtactgacatctactaaaatattctt 38137512  T
Q  216 attaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagt 315  Q
    ||||| |||||||||||| |||||||| ||   ||||||||||||| ||| | | ||||||||| ||| ||||||||||  |||||| |||||| |||||    
T  38137513 attaactgtagttagtggggtagttaaattcgatgaaattcaataaataaagatataatagtggaaaataataataaatattgcattagtattgcaaagt 38137612  T
Q  316 gagaattattttga 329  Q
    || |||||||||||    
T  38137613 gacaattattttga 38137626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 34957640 - 34957438
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||| || |  |||| || | ||||||||||||||||||| ||  ||||||||||| |||  ||||||| ||| |  |||||||||| |||    
T  34957640 tcgtttaaggtttatggacaattactaaggaaatgattaattgtgttgaatttgatggtaaaatttgtataatttacttaaatatccttattaattatag 34957541  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    |||||||||||||| |||| | ||||||||||||| ||||| | || ||   ||||||||||||||||| | |||||||||| |||||||| ||||||||    
T  34957540 ttagtggagtagttcagttaaatgaaattcaataaataaggatatagta-acggaaaaaataataaatgttacattggtattttaaagtgataattattt 34957442  T
Q  327 tgag 330  Q
    ||||    
T  34957441 tgag 34957438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 124 - 261
Target Start/End: Original strand, 28690757 - 28690894
Alignment:
Q  124 tactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattg 223  Q
    |||| |||||||||||||||| ||||||||   ||||||||||||||||||||||||| |||||||||| || |||||||||||| |   ||||||||||    
T  28690757 tacttgtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgatttcaacggtaaaattaatatcatttactaaaatatctttattaattg 28690856  T
Q  224 tagttagtggagtagttaagttgactgaaattcaataa 261  Q
    |||||||||   |||||||||||  |||||||||||||    
T  28690857 tagttagtgagatagttaagttggatgaaattcaataa 28690894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 117 - 330
Target Start/End: Complemental strand, 30711220 - 30711008
Alignment:
Q  117 acaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacactta 216  Q
    ||||||||| |  ||||||||||||||||  ||||||   |||| ||||||| ||||||||| |||| |||||||| || |||||||||||||||  |||    
T  30711220 acaatattagtattttaaggtttgtgcattgttattaaagaaataattaattatgttgattttaatgataaaattaatatcatttactaaaacaccatta 30711121  T
Q  217 ttaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtg 316  Q
    ||||||||||||| ||||| | |||||||   ||||||||||||| ||||  | ||||||| | ||||||||||||||| || |||| |||| |||| ||    
T  30711120 ttaattgtagttaatggagcaattaagttagatgaaattcaataaataagattataatagt-gaaaaaaataataaatgttgtattgatattctaaaatg 30711022  T
Q  317 agaattattttgag 330  Q
    | |||||| |||||    
T  30711021 acaattatgttgag 30711008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 155 - 330
Target Start/End: Complemental strand, 12904974 - 12904798
Alignment:
Q  155 gaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaaca-cacttattaattgtagttagtggagtagttaagttgactgaaa 253  Q
    |||||| ||||||| |||||||||||||  |||||||||||  |||||  |||| | |  |||||||||||||||||||||||| ||||||||  |||||    
T  12904974 gaaaataattaattatgttgatttcaattataaaattagtatgatttatcaaaatatcttttattaattgtagttagtggagtaattaagttggatgaaa 12904875  T
Q  254 ttcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    |||||||| ||||||| ||||||||| |||||| |||||| ||| |||| ||||| |||| | | ||||||||||||    
T  12904874 ttcaataaataagggtataatagtggaaaaaaaaaataaaagctccattagtattataaattaacaattattttgag 12904798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 192 - 330
Target Start/End: Original strand, 33491402 - 33491542
Alignment:
Q  192 agtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaa-ttcaataagtaagggtgtaatagtg-ggaaaaaataa 289  Q
    ||||| |||||||||||||| |||||||||| |||||||||||||||||||||||  ||||| || ||||| ||||||| |||||||| | ||||||| |    
T  33491402 agtagaatttactaaaacactcttattaattatagttagtggagtagttaagttgtatgaaattttaataaataagggtataatagtgcgaaaaaaatca 33491501  T
Q  290 taaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    ||||| || |||| |||||||||||||| ||||||||||||    
T  33491502 taaatactacattagtattgtaaagtgacaattattttgag 33491542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 130 - 277
Target Start/End: Complemental strand, 34750630 - 34750483
Alignment:
Q  130 tttaaggtttgtgcatgattatt-atgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    ||||||||||||||| |||| || |||||| ||||| ||||||||||||| |||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  34750630 tttaaggtttgtgcacgatttttgatgaaa-tgattgattgtgttgattttaatggtaaaattagtatcatttactaaaacatccttattaattgtagtt 34750532  T
Q  229 agtggagtagttaagttgactgaaattcaataagtaagggtgtaatagt 277  Q
     ||||||||||||| |||  ||||| | ||||| ||| ||| |||||||    
T  34750531 ggtggagtagttaacttggatgaaaattaataaataatggtataatagt 34750483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 115 - 231
Target Start/End: Original strand, 50035183 - 50035299
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    |||||||||||  | |||||||||||||||||||||||| |||||||| ||||| |||||||||||||  ||||||||||||||||||| |||||||  |    
T  50035183 tcacaatattagacttttaaggtttgtgcatgattattaagaaaatgaataattatgttgatttcaataataaaattagtagcatttaccaaaacaccgt 50035282  T
Q  215 tattaattgtagttagt 231  Q
    | |||||||||||||||    
T  50035283 tgttaattgtagttagt 50035299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 127 - 259
Target Start/End: Complemental strand, 14194692 - 14194561
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||||||||||||| |||| |||   ||||||| ||||||||||||||||||| ||||||||||| |||||||||||| ||  |||| |||||| |    
T  14194692 tcgtttaaggtttgtgcacgatttttaaagaaatgatcaattgtgttgatttcaatgataaaattagtaccatttactaaaatacttttatgaattgt-g 14194594  T
Q  227 ttagtggagtagttaagttgactgaaattcaat 259  Q
    ||||||||||| ||||||||  |||||||||||    
T  14194593 ttagtggagtaattaagttggatgaaattcaat 14194561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 129 - 261
Target Start/End: Complemental strand, 19612043 - 19611912
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    |||||| ||||||| | |||| ||| |||| |||||||||||||||||||||||| |||||||| ||  ||||||||||| |  |||||||||||| |||    
T  19612043 gtttaaagtttgtgtacgatttttaagaaagtgattaattgtgttgatttcaatgttaaaatta-tataatttactaaaatatccttattaattgttgtt 19611945  T
Q  229 agtggagtagttaagttgactgaaattcaataa 261  Q
    |||||||||||||||||   |||||||||||||    
T  19611944 agtggagtagttaagtttgatgaaattcaataa 19611912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 204 - 327
Target Start/End: Original strand, 41038448 - 41038571
Alignment:
Q  204 taaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattg 303  Q
    ||||| || ||||||||||||||||| || |||||||||||||  |||| |||||||| ||||| | | ||| ||| ||||||||||||||||||||||     
T  41038448 taaaatactcttattaattgtagttaatgaagtagttaagttggttgaagttcaataaataaggatattataatggaaaaaaataataaatgctgcattt 41038547  T
Q  304 gtattgtaaagtgagaattatttt 327  Q
    ||||| |||||||| |||||||||    
T  41038548 gtattttaaagtgacaattatttt 41038571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 187 - 327
Target Start/End: Original strand, 27549323 - 27549464
Alignment:
Q  187 aaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtggg-aaaaa 285  Q
    |||||||| |||||||||||||||   |||||| || |||||||||| |||||||| || | | ||||||||||| ||| | | |||||||||| |||||    
T  27549323 aaattagttgcatttactaaaacaacattattagttatagttagtggcgtagttaaattaaattaaattcaataaataaagttataatagtgggaaaaaa 27549422  T
Q  286 ataataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
    |||||||||| ||||||| ||||||||||||| | |||||||    
T  27549423 ataataaatgttgcattgatattgtaaagtgacagttatttt 27549464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 127 - 231
Target Start/End: Complemental strand, 49830267 - 49830162
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaa-tgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgta 225  Q
    |||||||| ||||||||| ||||||||  |||| ||||||||||||||||||||||| ||||||||| || |||||||||||| ||  ||||||||||||    
T  49830267 tcgtttaacgtttgtgcacgattattaaaaaaaatgattaattgtgttgatttcaatagtaaaattaatatcatttactaaaataccattattaattgta 49830168  T
Q  226 gttagt 231  Q
    ||||||    
T  49830167 gttagt 49830162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 157 - 254
Target Start/End: Original strand, 54477467 - 54477564
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaat 254  Q
    ||||| |||||||||||||||| ||||||||||||| || |||||||||||| |   |||||||||||||||| ||||||||||||||||| ||||||    
T  54477467 aaatggttaattgtgttgattttaatggtaaaattaatatcatttactaaaatatttttattaattgtagttaatggagtagttaagttgaatgaaat 54477564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 115 - 191
Target Start/End: Original strand, 33491049 - 33491125
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaatt 191  Q
    ||||||||||| |||||||||||||||||| |||||||| | |||||||||||||||||||||||||| ||||||||    
T  33491049 tcacaatattagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatagtaaaatt 33491125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 131 - 259
Target Start/End: Complemental strand, 43719399 - 43719272
Alignment:
Q  131 ttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttag 230  Q
    |||| |||||| || ||| ||||  ||||||||||||||||||||||| ||||||||||||| || |||| ||| |||||  ||||||||||||||||||    
T  43719399 ttaaagtttgtacacgatcattaataaaatgattaattgtgttgattttaatggtaaaatta-tatcattcactgaaacatccttattaattgtagttag 43719301  T
Q  231 tggagtagttaagttgactgaaattcaat 259  Q
    |||||||||||| |||  || ||||||||    
T  43719300 tggagtagttaaattggatggaattcaat 43719272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 119 - 326
Target Start/End: Complemental strand, 23068345 - 23068137
Alignment:
Q  119 aatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaa-aat--tagtagcatttactaaaacacactt 215  Q
    ||||||| || ||||| |||||||||||||||| | |||||| ||||||| ||||||||| | |||||| |||  |||||||||| ||| |||||| |||    
T  23068345 aatattagtcatttaaagtttgtgcatgattatcaagaaaataattaattatgttgattttagtggtaagaataatagtagcattcactgaaacac-ctt 23068247  T
Q  216 attaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagt 315  Q
    ||||||||||||| ||| | || |||||||   ||||||||||||| |||  || ||||| | |  |||||||||||||| || |||| |||||||||||    
T  23068246 attaattgtagtttgtgaaatatttaagttagatgaaattcaataaataaaagtataataat-gacaaaaataataaatgttgtattgatattgtaaagt 23068148  T
Q  316 gagaattattt 326  Q
     | ||||||||    
T  23068147 aacaattattt 23068137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 127 - 261
Target Start/End: Complemental strand, 19609436 - 19609302
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||| |||||| |||| | ||| ||||||||||| |||||||||||||||| ||||||||| || ||||||| |||| |  ||||||| |||| |    
T  19609436 tcgtttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatcgtaaaattaatatcatttacaaaaatattcttattacttgttg 19609337  T
Q  227 ttagtggagtagttaagttgactgaaattcaataa 261  Q
    |||||||||||| ||||||   | |||||||||||    
T  19609336 ttagtggagtagataagtttgataaaattcaataa 19609302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 129 - 330
Target Start/End: Complemental strand, 40462447 - 40462255
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    |||||||||||| || ||||| ||| |||||||||||||||| ||||||||| || ||||||      ||||| |||||| ||  || ||||||||||||    
T  40462447 gtttaaggtttgagcgtgatttttaagaaaatgattaattgttttgatttcagtgataaaat------cattt-ctaaaatacttttgttaattgtagtt 40462355  T
Q  229 agtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttg 328  Q
    ||  ||||||||||||||  | ||||||||||| ||   || |||||||||||||||  |||||||| |||||||  ||| |||||||| || |||||||    
T  40462354 agaagagtagttaagttggataaaattcaataaatagttgtataatagtgggaaaaa--aataaatgttgcattgacattctaaagtgacaactattttg 40462257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 317
Target Start/End: Original strand, 49447766 - 49447960
Alignment:
Q  121 tattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaa 220  Q
    ||||| |||||||| ||||||| | ||| ||||   ||||||||||||||||||||||||| |   ||| || ||  |||||| |||| || ||||||||    
T  49447766 tattagtcgtttaatgtttgtgtacgataattaacgaaatgattaattgtgttgatttcaacg---aaaataatattatttaccaaaatacccttattaa 49447862  T
Q  221 ttgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaata-ataaatgctgcattggtattgtaaagtga 317  Q
    ||||||||||| || ||||||| ||   ||||||| ||||| ||||||| ||||||| | |||||||| ||||||  ||||||| | || ||||||||    
T  49447863 ttgtagttagtagaatagttaaatttgatgaaatttaataaataagggtataatagtagaaaaaaatatataaatagtgcattgattttctaaagtga 49447960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 261
Target Start/End: Original strand, 36462953 - 36463058
Alignment:
Q  156 aaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaatt 255  Q
    ||||||||| || || ||||||| |||| ||||||| |||||||||||||||| |  |||||||||||| ||| |||||||| ||||||||  |||||||    
T  36462953 aaaatgattgatagtattgattttaatgttaaaattggtagcatttactaaaataaccttattaattgttgtttgtggagtaattaagttggatgaaatt 36463052  T
Q  256 caataa 261  Q
     |||||    
T  36463053 aaataa 36463058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 261
Target Start/End: Original strand, 30682074 - 30682178
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattc 256  Q
    |||||||||||||| || |||| |||| |||||| |||| |||||||||||| |  ||||||||||||||||| |||| || ||||||||   |||||||    
T  30682074 aaatgattaattgttttaattttaatgttaaaatgagtatcatttactaaaataatcttattaattgtagttaatggaataattaagttggacgaaattc 30682173  T
Q  257 aataa 261  Q
    |||||    
T  30682174 aataa 30682178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 119 - 195
Target Start/End: Original strand, 51064788 - 51064864
Alignment:
Q  119 aatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagta 195  Q
    ||||||| |||||||| |||| |||| || |||||  ||||||||||||||||||| ||||||||||||||||||||    
T  51064788 aatattagtcgtttaaagtttatgcacgaatattaaaaaaatgattaattgtgttgctttcaatggtaaaattagta 51064864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 313
Target Start/End: Original strand, 54225884 - 54225999
Alignment:
Q  197 catttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgc 296  Q
    ||||||||||||||  |||||||||| ||||||||||||| ||| || ||| |||||| |||||| ||||||| |  || ||| ||| |||||||||||     
T  54225884 catttactaaaacagccttattaattatagttagtggagtggtt-agatgattgaaatgcaataaataagggtatgttaatggaaaagaataataaatgt 54225982  T
Q  297 tgcattggtattgtaaa 313  Q
    || ||||||||||||||    
T  54225983 tgtattggtattgtaaa 54225999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 237
Target Start/End: Complemental strand, 39931736 - 39931656
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagta 237  Q
    |||| |||||| |||||||||| ||||| |||||  ||| |||||| ||||||||||||||||||| ||||||||| ||||    
T  39931736 aaattattaatagtgttgattttaatggcaaaatatgtatcatttattaaaacacacttattaattatagttagtgaagta 39931656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 164 - 326
Target Start/End: Original strand, 24245109 - 24245269
Alignment:
Q  164 taattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagt 263  Q
    ||||| |||||||||||||  |||||||||||  ||||||||||||| | |||||||||||| |||||  ||||||||| | |  || |||||||||| |    
T  24245109 taattatgttgatttcaataataaaattagtattatttactaaaacata-ttattaattgtacttagtaaagtagttaaatcggatgcaattcaataaat 24245207  T
Q  264 aagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||   | |||||||  |||||||||||||||  |  |||| |||| |||||||| ||||||||    
T  24245208 aataatataatagt-tgaaaaaataataaataatatattgatattttaaagtgataattattt 24245269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 245
Target Start/End: Complemental strand, 38512162 - 38512044
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||| ||||||| |||||| || | ||||| ||||||| | ||||||| |||| |||||||  || |||||| ||||| | | ||||| ||||||     
T  38512162 tcgtttaaagtttgtgtatgatttttttaaaaataattaattttattgattttaatgataaaattgatatcatttattaaaatatatttattgattgtaa 38512063  T
Q  227 ttagtggagtagttaagtt 245  Q
    ||| |||||||||||||||    
T  38512062 ttattggagtagttaagtt 38512044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 42278772 - 42278695
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtgga 234  Q
    ||||||||| |||  ||||||||||| |||||||||  | ||||||||||||||| | |||||||| |||||||||||    
T  42278772 aaatgattagttgaattgatttcaatcgtaaaattaacatcatttactaaaacactcatattaattatagttagtgga 42278695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 258
Target Start/End: Original strand, 48541036 - 48541109
Alignment:
Q  185 taaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaa 258  Q
    |||||||| || |||||| ||||| |  ||||||||||||| ||||| ||||||||||||||| ||||||||||    
T  48541036 taaaattaatatcatttattaaaatattcttattaattgtaattagttgagtagttaagttgaatgaaattcaa 48541109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 326
Target Start/End: Original strand, 51065145 - 51065190
Alignment:
Q  281 aaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||    
T  51065145 aaaaaataataaatgctgcattggtattgtaaaatgacaattattt 51065190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 204 - 327
Target Start/End: Complemental strand, 40194563 - 40194439
Alignment:
Q  204 taaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgg-gaaaaaataataaatgctgcatt 302  Q
    ||||| || ||||||||||||||||||||| |||||| |||||   |||||| ||||| ||| | | |||||||||  |||||||||| ||| || ||||    
T  40194563 taaaatactcttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggaaaaaaaataatgaatactacatt 40194464  T
Q  303 ggtattgtaaagtgagaattatttt 327  Q
    | |||| |||| ||| |||||||||    
T  40194463 gatattctaaattgacaattatttt 40194439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 41351629 - 41351676
Alignment:
Q  214 ttattaattgtagttagtggagtagttaagttgactgaaattcaataa 261  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||    
T  41351629 ttattaatgatagttagtggagtagttaagttgaatgaaattcaataa 41351676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 45811790 - 45811727
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaatta 192  Q
    ||||||||||||||  ||||  ||| |||||||||||||| ||||||||| |||||||||||||    
T  45811790 gtttaaggtttgtgtgtgatatttaagaaaatgattaattatgttgattttaatggtaaaatta 45811727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 261
Target Start/End: Original strand, 25108547 - 25108637
Alignment:
Q  171 gttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataa 261  Q
    |||||||||||||||||||||| || ||| | |||||||| |  || |||| ||||||| || ||||||||| | || |||||||||||||    
T  25108547 gttgatttcaatggtaaaattaatatcatcttctaaaacataagtactaatcgtagttaatgaagtagttaaatagaatgaaattcaataa 25108637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 317
Target Start/End: Original strand, 50036510 - 50036599
Alignment:
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtga 317  Q
    ||||| || ||||||||||   ||||||||||||| ||| ||| |||||| || ||||||||||||||||| ||||  |||||||||||||    
T  50036510 ttagttgaatagttaagtttgatgaaattcaataaataaaggtataatagcgg-aaaaaataataaatgctacattaatattgtaaagtga 50036599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 38705267 - 38705173
Alignment:
Q  174 gatttcaatggtaaaattagtag---catttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaag 266  Q
    ||||||||||||||||||||||    |||||||||||  |  ||||||||||||||||||| ||||| |||||||   ||||||||||||| ||||    
T  38705267 gatttcaatggtaaaattagtactatcatttactaaat-attcttattaattgtagttagttgagtaattaagttagatgaaattcaataaataag 38705173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 138 - 223
Target Start/End: Original strand, 52206836 - 52206921
Alignment:
Q  138 ttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattg 223  Q
    |||||||| ||| ||| | ||||||||| ||   ||||||||||||||||||||| || |||||||||||| | | ||||||||||    
T  52206836 ttgtgcattattcttaaggaaatgattagttaaattgatttcaatggtaaaattaatatcatttactaaaatatatttattaattg 52206921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 30861529 - 30861470
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaa 189  Q
    ||||||| ||||||||||||| ||| |||| | |||||||||||||||||||||| |||||    
T  30861529 gtttaagatttgtgcatgatttttaggaaatt-attaattgtgttgatttcaatgataaaa 30861470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 109 - 144
Target Start/End: Complemental strand, 9196674 - 9196639
Alignment:
Q  109 tccatttcacaatattactcgtttaaggtttgtgca 144  Q
    ||||||||||||||||| ||||||||||||||||||    
T  9196674 tccatttcacaatattagtcgtttaaggtttgtgca 9196639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 43715299 - 43715240
Alignment:
Q  271 taatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    ||||| ||| ||||||||||||||| | ||||| |||| |||||||| ||||||||||||    
T  43715299 taataatggaaaaaaataataaatgttacattgatattctaaagtgacaattattttgag 43715240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 30710628 - 30710583
Alignment:
Q  285 aataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    ||||||||||| ||||||| |||| |||||||| ||||||||||||    
T  30710628 aataataaatgttgcattgatattctaaagtgacaattattttgag 30710583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 253
Target Start/End: Complemental strand, 37804833 - 37804796
Alignment:
Q  216 attaattgtagttagtggagtagttaagttgactgaaa 253  Q
    ||||||||||||||||| |||||||||||||| |||||    
T  37804833 attaattgtagttagtgaagtagttaagttgaatgaaa 37804796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 378
Target Start/End: Original strand, 51065213 - 51065246
Alignment:
Q  345 ctaaagagacaataattgtgagacggagggagta 378  Q
    ||||||||||||||||| ||||||||||||||||    
T  51065213 ctaaagagacaataattatgagacggagggagta 51065246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 7757663 - 7757599
Alignment:
Q  128 cgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaatta 192  Q
    |||||| ||||| |||| | || ||| | ||| ||||||||||||||||||||||| ||||||||    
T  7757663 cgtttagggtttatgcacgtttgttaaggaaaagattaattgtgttgatttcaatgataaaatta 7757599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 24569294 - 24569326
Alignment:
Q  346 taaagagacaataattgtgagacggagggagta 378  Q
    |||||||||||| ||||||||||||||||||||    
T  24569294 taaagagacaattattgtgagacggagggagta 24569326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 245
Target Start/End: Complemental strand, 37804898 - 37804854
Alignment:
Q  201 tactaaaacacacttattaattgtagttagtggagtagttaagtt 245  Q
    |||||||| || |||||||||| | ||||||||||||||||||||    
T  37804898 tactaaaatacccttattaattatggttagtggagtagttaagtt 37804854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 244
Target Start/End: Original strand, 43870836 - 43870904
Alignment:
Q  176 tttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagt 244  Q
    |||| ||| ||||||||||  |||||||||||  || ||| ||||| |||||||||| |||||||||||    
T  43870836 tttctatgataaaattagtttcatttactaaagtactctttttaatagtagttagtgaagtagttaagt 43870904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 156; Significance: 9e-83; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 115 - 329
Target Start/End: Original strand, 40530188 - 40530403
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||  ||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  40530188 tcacaatatttgtcgtttaaggtctgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacaccct 40530287  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaa-aaataataaatgctgcattggtattgtaaa 313  Q
    |||||||||||||||||||||| |||||||||  ||||||| ||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  40530288 tattaattgtagttagtggagtggttaagttggatgaaattaaataaataagggtataatagtgggaaataaataataaatgctgcattggtattgtaaa 40530387  T
Q  314 gtgagaattattttga 329  Q
    |||| |||||||||||    
T  40530388 gtgacaattattttga 40530403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 115 - 379
Target Start/End: Complemental strand, 4818700 - 4818435
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||  |||||||||||||||||| |||||||| | |||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  4818700 tcacaatatttgtcgtttaaggtttgtgcacgattattaaggaaataattaattgtgttgatttcaattgtaaaattagtagcatttactaaaacaccct 4818601  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaa-aaaataataaatgctgcattggtattgtaaa 313  Q
    ||||||||||||||||||||||  |||||||   ||||||||||||| ||||||| |||||||||||| ||||||||||||||| |||||||||| ||||    
T  4818600 tattaattgtagttagtggagtgattaagttagatgaaattcaataaataagggtataatagtgggaaaaaaataataaatgctacattggtattataaa 4818501  T
Q  314 gtgagaattattttgagnnnnnnnnnnnntgctaaagagacaataattgtgagacggagggagtat 379  Q
    |||| ||||||||||||            || |||||||||||||||||||||||||| |||||||    
T  4818500 gtgacaattattttgagaaaaagaaaaattgttaaagagacaataattgtgagacggatggagtat 4818435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 115 - 330
Target Start/End: Complemental strand, 8698458 - 8698242
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||  | |||||||||||||||| ||||||||   |||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||    
T  8698458 tcacaatatttgttgtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgatttcaatggtaaaattagttgcatttaccaaaacaccct 8698359  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgg-gaaaaaataataaatgctgcattggtattgtaaa 313  Q
    |||||||||||||||||||||| |||||||||  ||||||||||||| ||||||| |||||||||  |||||||||||||| || ||||| |||||||||    
T  8698358 tattaattgtagttagtggagtggttaagttggatgaaattcaataaataagggtataatagtggaaaaaaaataataaatactacattgatattgtaaa 8698259  T
Q  314 gtgagaattattttgag 330  Q
    |||| ||||||||||||    
T  8698258 gtgacaattattttgag 8698242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 115 - 330
Target Start/End: Complemental strand, 41496229 - 41496014
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| ||| ||||||||||| || ||||||||  ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||   |    
T  41496229 tcacaatattagtcgattaaggtttgtacacgattattaaaaaaataattaattgtgttgatttcaatggtaaaattagttgcatttagtaaaacatcat 41496130  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaag 314  Q
    |||||||||||||||||||||||||||| |||  |||||| |||||| ||| ||| ||||||||| ||| ||||||||||| |||||| |||||||||||    
T  41496129 tattaattgtagttagtggagtagttaaattggatgaaatgcaataaataaaggtataatagtggaaaagaataataaatgttgcattagtattgtaaag 41496030  T
Q  315 tgagaattattttgag 330  Q
    ||| ||||||||||||    
T  41496029 tgacaattattttgag 41496014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 127 - 329
Target Start/End: Original strand, 6753635 - 6753836
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||| |||| |||||||| |||||||||||||| | || ||||||||||||||||||||| |||||||||||| || ||||||||||||||    
T  6753635 tcgtttaaggtttatgcacgattattaagaaaatgattaatt-tattaatttcaatggtaaaattagtatcatttactaaaatacccttattaattgtag 6753733  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||||||||||||||||||||  ||||||| ||||| ||||||| ||||| ||| |||| |||||||||| |||||||||||| |||||||| ||||||||    
T  6753734 ttagtggagtagttaagttggatgaaatttaataaataagggtataataatggaaaaagataataaatgttgcattggtattctaaagtgataattattt 6753833  T
Q  327 tga 329  Q
    |||    
T  6753834 tga 6753836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 130 - 378
Target Start/End: Complemental strand, 40900052 - 40899804
Alignment:
Q  130 tttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtta 229  Q
    |||||||||| |||| | |||||| | ||||||||||||||||||||||  |||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  40900052 tttaaggtttatgcacggttattaaggaaatgattaattgtgttgattttgatggcaaaattagtatcatttactaaaacacccttattaattgtagtta 40899953  T
Q  230 gtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttga 329  Q
    ||||||||||||||||   ||||||||||||| ||||||| ||||| ||| ||| |||||||||||||||| || |||| |||||||| |||||||||||    
T  40899952 gtggagtagttaagttagatgaaattcaataaataagggtataataatggaaaataataataaatgctgcaatgttattctaaagtgacaattattttga 40899853  T
Q  330 gnnnnnnnnnnnntgctaaagagacaataattgtgagacggagggagta 378  Q
    |            || |||||||||||| ||||||||||||||||||||    
T  40899852 gaaaaagaaaatttgataaagagacaattattgtgagacggagggagta 40899804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 27542932 - 27542729
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||||||||||||| |||||||| | |||||||| ||||||||||||||||||||||||||| || |||||||||||| || ||||||||||||||    
T  27542932 tcgtttaaggtttgtgcacgattattaaggaaatgattgattgtgttgatttcaatggtaaaattaataccatttactaaaatactcttattaattgtag 27542833  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||||||||||||||||||||  | ||||||||||| |||| || ||||| ||| ||||| ||||| |||||||||| ||||| |||||| | ||||||||    
T  27542832 ttagtggagtagttaagttggataaaattcaataaataagagtataataatggaaaaaagtaatacatgctgcattagtattctaaagtcacaattattt 27542733  T
Q  327 tgag 330  Q
    ||||    
T  27542732 tgag 27542729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 129 - 330
Target Start/End: Original strand, 8724987 - 8725188
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    |||||||||||||||| ||||||||   |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  8724987 gtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgatttcaatggtaaaattaatatcatttactaaaacacacttattaattgtagtt 8725086  T
Q  229 agtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttg 328  Q
    |||||||||||||| |||| ||||||||||||| |||  || ||||| ||  ||| ||||| || |||||||||| |||| |||| ||| ||||||||||    
T  8725087 agtggagtagttaacttgaatgaaattcaataaataatagtataataatgaaaaataataaaaactgctgcattgttattctaaaatgacaattattttg 8725186  T
Q  329 ag 330  Q
    ||    
T  8725187 ag 8725188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 127 - 379
Target Start/End: Original strand, 2232049 - 2232299
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||        
T  2232049 tcgtttaaggtttgtgcacgattattaagaaaatgaataattgtgttgatttcaatggtaaaattagtagcatttattaaaaaactcttattaatt---- 2232144  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaa---aataataaatgctgcattggtattgtaaagtgagaatta 323  Q
    ||||||||||||||||||||  ||||||||||||| ||||||| ||||||| | ||||   ||||||||||||| ||||||||||||||| ||| |||||    
T  2232145 ttagtggagtagttaagttggatgaaattcaataaataagggtataatagtagaaaaaaataataataaatgctacattggtattgtaaaatgacaatta 2232244  T
Q  324 ttttgagnnnnnnnnnnnntgctaaagagacaataattgtgagacggagggagtat 379  Q
    ||| |||            || ||||||||||||||||||||||| ||||||||||    
T  2232245 tttagagataaagaaaaaatgttaaagagacaataattgtgagac-gagggagtat 2232299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 127 - 330
Target Start/End: Original strand, 6315753 - 6315956
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||||| |||| |  |||||||| | |||||||| |||||||| ||||||||| |||||||| || |||||||||||| || ||||||||||||||    
T  6315753 tcgtttaagggttgtactcgattattaaggaaatgattgattgtgttaatttcaatgataaaattaatatcatttactaaaatacccttattaattgtag 6315852  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    |||||| |||||||||||||  ||||||||||||| ||||||| ||||| ||| ||| ||||||||||| |||||||||||| |||||||| ||||||||    
T  6315853 ttagtgaagtagttaagttggatgaaattcaataaataagggtataataatggaaaataataataaatgttgcattggtattctaaagtgacaattattt 6315952  T
Q  327 tgag 330  Q
    ||||    
T  6315953 tgag 6315956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 127 - 377
Target Start/End: Original strand, 1248580 - 1248830
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||| |||||||| | |||||| | |||| ||||||| ||||||||||||||||||||||| || |||||||||||| || ||||||||||||||    
T  1248580 tcgtttaagatttgtgcacggttattaaggaaattattaattatgttgatttcaatggtaaaattaatatcatttactaaaatacccttattaattgtag 1248679  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    |||||| |||||||||||||| | ||||||||| | ||||||| ||||| ||  ||| ||||||||||| ||||||| |||| |||||||| ||||||||    
T  1248680 ttagtgaagtagttaagttgaataaaattcaattaataagggtataataatgaaaaataataataaatgttgcattgatattctaaagtgacaattattt 1248779  T
Q  327 tgagnnnnnnnnnnnntgctaaagagacaataattgtgagacggagggagt 377  Q
    ||||            ||||||||||||||| ||| |||||||||||||||    
T  1248780 tgagaaaacgaaaaagtgctaaagagacaattattatgagacggagggagt 1248830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 137 - 330
Target Start/End: Original strand, 6615866 - 6616059
Alignment:
Q  137 tttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagt 236  Q
    |||||||| ||||||||   |||| |||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||| |||||||||||||    
T  6615866 tttgtgcacgattattaaataaataattaattgtgttgatttcaatggtaaaattagtagcatttaccaaaacatccttattaattttagttagtggagt 6615965  T
Q  237 agttaagttgactgaaattcaataagtaagggtgtaatagtgg-gaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
     |||||||||  || |||||||||| ||||||| |||||||||  ||||||||||||||| ||||| ||||||||||||||| ||||||||||||    
T  6615966 ggttaagttggatg-aattcaataaataagggtataatagtggaaaaaaaataataaatgttgcataggtattgtaaagtgacaattattttgag 6616059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 115 - 329
Target Start/End: Complemental strand, 9515895 - 9515668
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| |||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||    
T  9515895 tcacaatattagtcgtttaaggtttgtgcacgattattaagataatgattaattgtgttgatttcaatggtaaaattagtatcatttactaaaacatcct 9515796  T
Q  215 tatta----------attgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtggga---aaaaataataaatgctgcat 301  Q
    |||||          || ||||||||||||||||||||||||| ||||||||| ||| |||| || ||||||||| |   || ||||||||||| |||||    
T  9515795 tattaatagtaggtcatagtagttagtggagtagttaagttgaatgaaattcattaaataagagtataatagtggaaaataataataataaatgatgcat 9515696  T
Q  302 tggtattgtaaagtgagaattattttga 329  Q
    | |||||||||||||| |||||||||||    
T  9515695 tagtattgtaaagtgacaattattttga 9515668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 115 - 329
Target Start/End: Complemental strand, 31655202 - 31654987
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| |||||||| ||||||| | ||||||||   |||||||||||||||||||||||||||||||||||| || ||||||||| || |  ||    
T  31655202 tcacaatattagtcgtttaaagtttgtgtacgattattaaagaaatgattaattgtgttgatttcaatggtaaaattaatatcatttactataatatcct 31655103  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggta-ttgtaaa 313  Q
    ||||||||||||||||||||||| ||| ||||| ||||||||||||| ||||||| ||||||||| || ||||||||| |  || ||||||| || ||||    
T  31655102 tattaattgtagttagtggagtaattatgttgaatgaaattcaataaataagggtataatagtggaaataaataataattattgtattggtatttttaaa 31655003  T
Q  314 gtgagaattattttga 329  Q
    |||| |||||||||||    
T  31655002 gtgacaattattttga 31654987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 127 - 327
Target Start/End: Original strand, 7827902 - 7828102
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||||| || |||||||| |||||| |||||||||||||||||||||||||||||||||| |||||| ||||| || ||||||||||||||    
T  7827902 tcgtttaaggtttgtacacgattattaagaaaataattaattgtgttgatttcaatggtaaaattagtatcatttattaaaatacccttattaattgtag 7828001  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||||||||||||||||||||  ||||||| ||||| ||||| | ||||| ||  |||| |||||||||  ||||||| |||| |||| ||| |||| |||    
T  7828002 ttagtggagtagttaagttggatgaaatttaataaataaggatataataatgaaaaaagataataaatattgcattgatattttaaaatgataatttttt 7828101  T
Q  327 t 327  Q
    |    
T  7828102 t 7828102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 121 - 330
Target Start/End: Original strand, 15818450 - 15818661
Alignment:
Q  121 tattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcat--ttactaaaacacacttatt 218  Q
    ||||| ||||||||||||| |||| |||||||| | ||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||  |||||    
T  15818450 tattagtcgtttaaggtttatgcacgattattaaggaaatgtttaattgtgttgatttcaatggtaaaattagtagcatatttactaaaacacctttatt 15818549  T
Q  219 aattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgag 318  Q
    ||||||| | |||||||||||||| |||  ||||||| ||||| ||| ||  ||||||||| || || |||| |||| |||||||||||||||||||||     
T  15818550 aattgtaatcagtggagtagttaaattggatgaaatttaataaataaaggcataatagtggaaacaagtaattaatgttgcattggtattgtaaagtgac 15818649  T
Q  319 aattattttgag 330  Q
    | ||||||||||    
T  15818650 agttattttgag 15818661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 132 - 330
Target Start/End: Complemental strand, 6754160 - 6753963
Alignment:
Q  132 taaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagt 231  Q
    |||||||| ||||  |||| || |||||||||||||| ||||||||||||| ||||||||| |  ||||||||||||||| |||||||||||||||||||    
T  6754160 taaggtttatgcactattaataagaaaatgattaatt-tgttgatttcaatagtaaaattaatgtcatttactaaaacactcttattaattgtagttagt 6754062  T
Q  232 ggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    |||||||||||||||  ||||||||||||| ||||||| || |  ||| |||||| || ||||| |||||||||||| |||||||| ||||||||||||    
T  6754061 ggagtagttaagttggatgaaattcaataaataagggtatattgatggaaaaaaaaaaaaaatgttgcattggtattataaagtgacaattattttgag 6753963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 109 - 378
Target Start/End: Complemental strand, 29570547 - 29570282
Alignment:
Q  109 tccatttcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaa 208  Q
    ||||| ||||||||||| ||||||||| |||||||| ||||||||   |||||||||||||||||||||| |||| |||||||| ||| |||| ||||||    
T  29570547 tccatctcacaatattagtcgtttaagatttgtgcacgattattaaagaaatgattaattgtgttgattttaatgttaaaattattagtatttgctaaaa 29570448  T
Q  209 cacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaa-aaaataataaatgctgcattggtat 307  Q
    |||  |||||||||||||||| |||| |||||||||||  ||||||||||||| |||| || ||||||||  || |||| |||||| | || ||||||||    
T  29570447 cacctttattaattgtagttaatggaatagttaagttggatgaaattcaataaataagagtataatagtgaaaagaaaaaaataaacgttgtattggtat 29570348  T
Q  308 tgtaaagtgagaattattttgagnnnnnnnnnnnntgctaaagagacaataattgtgagacggagggagta 378  Q
    |||||||||| ||||| ||| ||            ||||||||||| ||||||||||||||||||||||||    
T  29570347 tgtaaagtgataattactttaag-----aaaaaaatgctaaagagataataattgtgagacggagggagta 29570282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 132 - 328
Target Start/End: Complemental strand, 19930078 - 19929882
Alignment:
Q  132 taaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagt 231  Q
    |||| ||| |||| |||||||| |||||||||||||| |||||||||  ||||||||| |||   ||||||||||||||  |||||||||||||||||||    
T  19930078 taagatttatgcacgattattaagaaaatgattaattttgttgattttgatggtaaaactagcgtcatttactaaaacatccttattaattgtagttagt 19929979  T
Q  232 ggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttg 328  Q
    | | |||||||||||  ||||||||||||| ||||||| ||||| ||| ||| ||||||||||| |||||||||||| |||||||| ||||||||||    
T  19929978 gaaatagttaagttggatgaaattcaataaataagggtataataatggaaaataataataaatgttgcattggtattctaaagtgacaattattttg 19929882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 115 - 288
Target Start/End: Complemental strand, 29374491 - 29374318
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| ||||||||||||| |  | | |||||| |||||||||||||| |||||||||||||| |||||||| ||||||||||||||| ||  |    
T  29374491 tcacaatattagtcgtttaaggtttatttaaggttattaagaaaatgattaattatgttgatttcaatgataaaattaatagcatttactaaaagacctt 29374392  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaata 288  Q
    |||||||||||||||||||||||||||| |||| | ||||||||||| ||||||| ||||||||  ||||||||    
T  29374391 tattaattgtagttagtggagtagttaaattgaataaaattcaataaataagggtataatagtgaaaaaaaata 29374318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 127 - 326
Target Start/End: Complemental strand, 21060767 - 21060569
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||| |||| | |||||| | ||||||||||||||||| ||||  |||||||||||||||  ||||||||||| || ||||||||||||||    
T  21060767 tcgtttaaggtttatgcacggttattagggaaatgattaattgtgtttattttgatggtaaaattagtattatttactaaaatactcttattaattgtag 21060668  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||||||||||||||||||||  | ||||||||||| ||| ||| ||||| | |||||| | |||||||| ||||||| |||| |||||||| ||||||||    
T  21060667 ttagtggagtagttaagttggataaaattcaataaataatggtataataat-ggaaaataaaataaatgatgcattgatattctaaagtgacaattattt 21060569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 157 - 330
Target Start/End: Complemental strand, 27580707 - 27580540
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattc 256  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||     
T  27580707 aaatgattaattgtgttgatttcaatggtaaaattaatatcatttactaaaatacccttattaattgtagttagtggagtagttaagttgaatgaaatta 27580608  T
Q  257 aataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    | ||| |||  || ||||| ||||||||      ||||| |||||||||  |||||||||| ||||||||||||    
T  27580607 attaaataaatgtataataatgggaaaa------aaatgttgcattggttatgtaaagtgacaattattttgag 27580540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 113 - 278
Target Start/End: Original strand, 22848346 - 22848511
Alignment:
Q  113 tttcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacaca 212  Q
    ||||||||||||| |||||||||| |||| || |||||||| | ||  |||||||||||||||||||||| ||||||||| ||| ||||| ||||||||     
T  22848346 tttcacaatattagtcgtttaaggcttgtacaagattattaaggaagcgattaattgtgttgatttcaatagtaaaattaatagtatttattaaaacacc 22848445  T
Q  213 cttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtg 278  Q
    ||||||||||||||||| |||||||||||  |||  ||||||||||||| ||||||| ||||||||    
T  22848446 cttattaattgtagttaatggagtagttagattggatgaaattcaataaataagggtataatagtg 22848511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 129 - 330
Target Start/End: Original strand, 42803598 - 42803799
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    ||||||||||| |||| |||||| |   |||| |||||||||||| |||||||| ||||||||||||| ||||||||||||||  |||||||||||||||    
T  42803598 gtttaaggtttatgcacgattatcaaagaaataattaattgtgttcatttcaattgtaaaattagtagtatttactaaaacaccattattaattgtagtt 42803697  T
Q  229 agtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttg 328  Q
    | |||||| |||||||||  ||||||||||||| |||| || ||||| |   | ||||||||||||| |||||| ||| |||||| ||| ||||||||||    
T  42803698 aatggagtggttaagttggatgaaattcaataaataagagtataatattaaaagaaaataataaatgatgcattagtactgtaaaatgacaattattttg 42803797  T
Q  329 ag 330  Q
    ||    
T  42803798 ag 42803799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 155 - 330
Target Start/End: Original strand, 41062164 - 41062338
Alignment:
Q  155 gaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaat 254  Q
    |||||| ||||||| |||||||||  ||| ||||||||||| ||||||||||||||| ||||||||||||||||||| || || ||||| ||  || | |    
T  41062164 gaaaataattaattatgttgattttgatgataaaattagtatcatttactaaaacacccttattaattgtagttagtagaataattaagctggatggagt 41062263  T
Q  255 tcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    ||||||| ||||||| | ||| | ||||||||||||||||| |||||||||||| |||||| | ||||||||||||    
T  41062264 tcaataaataagggtattataat-ggaaaaaataataaatgttgcattggtattctaaagttataattattttgag 41062338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 156 - 326
Target Start/End: Complemental strand, 4441129 - 4440959
Alignment:
Q  156 aaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaatt 255  Q
    ||||| ||||||||||||||||| |||| |||||||| ||  ||||||||||| |   ||||||||||||||||||||||||||||| |||  |||||||    
T  4441129 aaaataattaattgtgttgattttaatgataaaattaatattatttactaaaatatttttattaattgtagttagtggagtagttaaattggatgaaatt 4441030  T
Q  256 caataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    |||||| ||| ||| ||||||| | ||||||||||||||| ||   | ||||| |||||||| ||||||||    
T  4441029 caataaataacggtataatagtagaaaaaaataataaatgttgtcctcgtattataaagtgacaattattt 4440959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 148 - 330
Target Start/End: Original strand, 3348122 - 3348309
Alignment:
Q  148 ttattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagc-----atttactaaaacacacttattaattgtagttagtggagtagttaa 242  Q
    |||||| | |||| ||||||| |||||||||  ||||||||||||||| |     ||||| |||||||| |||||||| ||||||| ||| |||| ||||    
T  3348122 ttattaaggaaattattaattatgttgattttgatggtaaaattagtaccccattatttattaaaacacccttattaaatgtagttggtgaagtaattaa 3348221  T
Q  243 gttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    ||||  |||| |||||||| ||||| | | ||| ||| |||||||||||||||||||||||||||| |||| ||| ||||||||||||    
T  3348222 gttggatgaagttcaataaataaggatattataatggaaaaaaataataaatgctgcattggtattctaaaatgacaattattttgag 3348309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 155 - 330
Target Start/End: Original strand, 11796171 - 11796343
Alignment:
Q  155 gaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaat 254  Q
    ||||||| |||||||||||||||| |||| |||||||| ||  ||||||||||| |   ||||||||||||||||||| ||||||||||||   ||||||    
T  11796171 gaaaatggttaattgtgttgattttaatgataaaattaatattatttactaaaatattattattaattgtagttagtgtagtagttaagttagatgaaat 11796270  T
Q  255 tcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    | ||||| |||| || || ||||||   |||| |||||||||| ||||  |||| |||||||| ||||||||||||    
T  11796271 ttaataaataagagtatactagtgg---aaaaaaataaatgctacattattattttaaagtgacaattattttgag 11796343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 127 - 378
Target Start/End: Original strand, 2588044 - 2588290
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||  ||||   |||||| | ||||||||||||||||||||||  |||||||||||||||       ||||||||| ||||||||||||||    
T  2588044 tcgtttaaggttgatgcacagttattaaggaaatgattaattgtgttgattttgatggtaaaattagta-------ctaaaacacccttattaattgtag 2588136  T
Q  227 ttagtgg--agtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattat 324  Q
    ||||||   ||||||||| |||  | || |||||||| ||||||| | ||| ||  |||| | |||||||||||||||| |||| |||||||| ||||||    
T  2588137 ttagtgtgcagtagttaaattggataaagttcaataaataagggtattataatgaaaaaataaaataaatgctgcattgatattctaaagtgacaattat 2588236  T
Q  325 tttgagnnnnnnnnnnnntgctaaagagacaataattgtgagacggagggagta 378  Q
    ||||||             | |||||||||||| ||||||||||||||||||||    
T  2588237 tttgagaaaaagaaaaataggtaaagagacaattattgtgagacggagggagta 2588290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 127 - 329
Target Start/End: Original strand, 30512661 - 30512865
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaa-ttgta 225  Q
    |||| ||| |||| |||| |||||||| | |||||||||||||| |||||||||||||||||||||  | |||||||||| | || ||||||||  ||||    
T  30512661 tcgtataaagtttatgcacgattattaaggaaatgattaattgtattgatttcaatggtaaaattaacatcatttactaagatactcttattaacatgta 30512760  T
Q  226 gttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggta-ttgtaaagtgagaattat 324  Q
    ||||||| | |||||||||||  ||||||| ||||| ||||| | ||||  ||| |||||  ||| |||| |||||| ||| |||||||| || ||||||    
T  30512761 gttagtgaaatagttaagttggatgaaatttaataaataaggatataatgatggaaaaaataaatgaatgttgcattagtatttgtaaagcgacaattat 30512860  T
Q  325 tttga 329  Q
    |||||    
T  30512861 tttga 30512865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 127 - 329
Target Start/End: Original strand, 30553001 - 30553205
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaa-ttgta 225  Q
    |||| ||| |||| |||| |||||||| | |||||||||||||| |||||||||||||||||||||  | |||||||||| | || ||||||||  ||||    
T  30553001 tcgtataaagtttatgcacgattattaaggaaatgattaattgtattgatttcaatggtaaaattaacatcatttactaagatactcttattaacatgta 30553100  T
Q  226 gttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggta-ttgtaaagtgagaattat 324  Q
    ||||||| | |||||||||||  ||||||| ||||| ||||| | ||||  ||| |||||  ||| |||| |||||| ||| |||||||| || ||||||    
T  30553101 gttagtgaaatagttaagttggatgaaatttaataaataaggatataatgatggaaaaaataaatgaatgttgcattagtatttgtaaagcgacaattat 30553200  T
Q  325 tttga 329  Q
    |||||    
T  30553201 tttga 30553205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 127 - 276
Target Start/End: Complemental strand, 41478964 - 41478815
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaaca-cacttattaattgta 225  Q
    |||| ||||||||||||  |||| ||| ||||||||||||||||| | ||||||||||||||||||||  |||||||||||| | | ||| ||||||| |    
T  41478964 tcgtctaaggtttgtgcgcgatttttaagaaaatgattaattgtgcttatttcaatggtaaaattagtgtcatttactaaaatatcccttgttaattgca 41478865  T
Q  226 gttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatag 276  Q
    |||| |||| ||||||||||   ||||||||||||| ||||||| ||||||    
T  41478864 gttaatgga-tagttaagttagatgaaattcaataaataagggtataatag 41478815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 127 - 276
Target Start/End: Complemental strand, 41492439 - 41492290
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaaca-cacttattaattgta 225  Q
    |||| ||||||||||||  |||| ||| ||||||||||||||||| | ||||||||||||||||||||  |||||||||||| | | ||| |||| ||||    
T  41492439 tcgtctaaggtttgtgcgcgatttttaagaaaatgattaattgtgcttatttcaatggtaaaattagtgacatttactaaaatatcccttgttaaatgta 41492340  T
Q  226 gttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatag 276  Q
    |||| |||| ||||||||||   ||||||||||||| ||||||| ||||||    
T  41492339 gttaatgga-tagttaagttagatgaaattcaataaataagggtataatag 41492290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 131 - 326
Target Start/End: Original strand, 15439299 - 15439493
Alignment:
Q  131 ttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttag 230  Q
    ||||| |||||||| |||  ||| | |||||||||||||| || ||||||||||||||||||||| |||||||||||| ||  |||||||||||| ||||    
T  15439299 ttaagttttgtgcacgatatttaaggaaatgattaattgtattaatttcaatggtaaaattagtatcatttactaaaatacttttattaattgtatttag 15439398  T
Q  231 tggagtagttaagtt-gactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
     | |||||||||||| || |  |||| ||||| ||||||| ||||| |   ||| ||||||||||| ||||||   ||| |||||||||||| ||||    
T  15439399 agtagtagttaagtttgatt--aatttaataaataagggtataataattaaaaataataataaatgttgcatttaaattttaaagtgagaatgattt 15439493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 127 - 247
Target Start/End: Complemental strand, 29856182 - 29856064
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||| |||||||| |||||||| | |||| |  ||||| ||||||||||||| |||||||| || || || |||||| || ||||||||||||||    
T  29856182 tcgtttaagatttgtgcacgattattaaggaaataa--aattgcgttgatttcaatgataaaattaatatcacttgctaaaatactcttattaattgtag 29856085  T
Q  227 ttagtggagtagttaagttga 247  Q
    |||||||||||||||||||||    
T  29856084 ttagtggagtagttaagttga 29856064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 127 - 231
Target Start/End: Complemental strand, 32440278 - 32440174
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||| ||||||||||||||||| |||   ||||||||||||||||| ||||||||| |||||||| || |||||||||||| || |||||||||||||     
T  32440278 tcgttaaaggtttgtgcatgatttttaaagaaatgattaattgtgttaatttcaatgataaaattaatatcatttactaaaatacccttattaattgtac 32440179  T
Q  227 ttagt 231  Q
    |||||    
T  32440178 ttagt 32440174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 127 - 230
Target Start/End: Original strand, 38508163 - 38508266
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||| |||||||  |||| ||| ||||||||||||||||||| ||||||||||||||||||||| || | | ||||| || ||||||||||||||    
T  38508163 tcgtttaagatttgtgctcgatttttaagaaaatgattaattgtgttaatttcaatggtaaaattagtatcactcattaaaatactcttattaattgtag 38508262  T
Q  227 ttag 230  Q
    ||||    
T  38508263 ttag 38508266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 127 - 326
Target Start/End: Complemental strand, 11904343 - 11904141
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacactta-ttaattgta 225  Q
    |||||||| ||||||||| |||  ||| |||| ||||||||||| |||| ||||||  |||||||| || |||||||||||| || |||| |||||||||    
T  11904343 tcgtttaatgtttgtgcacgatctttaagaaagtgattaattgtattgagttcaataataaaattaatatcatttactaaaatactcttatttaattgta 11904244  T
Q  226 gttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtggga-aaaaataataaatgctgc-attggtattgtaaagtgagaatta 323  Q
    ||| ||||||||||||| ||   | ||| ||||||| ||||| | ||||||||||| |||| ||||||||  |||  ||||| || |||||||| |||||    
T  11904243 gttggtggagtagttaaattcgataaaaatcaataattaaggctataatagtgggagaaaattaataaattatgcgtttggttttttaaagtgacaatta 11904144  T
Q  324 ttt 326  Q
    |||    
T  11904143 ttt 11904141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 156 - 330
Target Start/End: Original strand, 26285483 - 26285657
Alignment:
Q  156 aaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaatt 255  Q
    |||||||||| |||  ||||||| || ||||||||||||| ||||||  ||||||||| ||||||||||||||| || |||||||||||||  | |||||    
T  26285483 aaaatgattagttgacttgattttaacggtaaaattagtatcatttatgaaaacacacgtattaattgtagttaatgaagtagttaagttgtataaaatt 26285582  T
Q  256 caataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    |||||| |||  || |  ||||||||||||  ||||||| || ||||  |||| | || ||| ||||||||||||    
T  26285583 caataaataaatgtatgttagtgggaaaaatcaataaatactacattaatattctcaattgacaattattttgag 26285657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 115 - 192
Target Start/End: Complemental strand, 843586 - 843509
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaatta 192  Q
    |||||||| || | |||||||||||||||| |||||||| |||||||||||||| |||||||||||||| ||||||||    
T  843586 tcacaataataattgtttaaggtttgtgcacgattattaagaaaatgattaattttgttgatttcaatgataaaatta 843509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 229
Target Start/End: Original strand, 37184058 - 37184157
Alignment:
Q  130 tttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtta 229  Q
    |||||| |||||||| |||| |||  |||||||||||||| |||||||||||||||||||||| || |||||||||||| |   ||||| ||||||||||    
T  37184058 tttaagttttgtgcaagatttttaaaaaaatgattaattgagttgatttcaatggtaaaattaatatcatttactaaaatatctttattcattgtagtta 37184157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 165 - 286
Target Start/End: Original strand, 11761313 - 11761433
Alignment:
Q  165 aattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagta 264  Q
    |||||||||||||| |||||||||||||||| || ||||||||| || ||||| |||| || | |||| | |||||||||||  || |||||||||| ||    
T  11761313 aattgtgttgattttaatggtaaaattagtatca-ttactaaaatactcttataaattatactaagtgaaatagttaagttggttggaattcaataaata 11761411  T
Q  265 agggtgtaatagtgggaaaaaa 286  Q
    || || ||||||||| ||||||    
T  11761412 agcgtataatagtggaaaaaaa 11761433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 261
Target Start/End: Complemental strand, 18841587 - 18841482
Alignment:
Q  156 aaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaatt 255  Q
    ||||||||||||| | ||||||| ||||||||||||| || |||||| ||||| ||  ||||||||||||||||||| | || |||| |||  |||||||    
T  18841587 aaaatgattaattatattgatttaaatggtaaaattaatatcatttaataaaataccgttattaattgtagttagtgaaataattaaattgggtgaaatt 18841488  T
Q  256 caataa 261  Q
    ||||||    
T  18841487 caataa 18841482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 42922843 - 42922894
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgattt 178  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  42922843 tcgtttaagatttgtgcatgattattaagaaaatgattaattgtgttgattt 42922894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 246
Target Start/End: Original strand, 38161392 - 38161507
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||||||||  |||| ||| |||   |||||||||||||||||     |||||||||||||  || |||||||||||| |  ||||||||| ||||    
T  38161392 tcgtttaaggtttcagcataatttttaaataaatgattaattgtgttc----caatggtaaaattcatatcatttactaaaatatccttattaatcgtag 38161487  T
Q  227 ttagtggagtagttaagttg 246  Q
    ||||||||||||||||||||    
T  38161488 ttagtggagtagttaagttg 38161507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 173 - 313
Target Start/End: Complemental strand, 39213437 - 39213296
Alignment:
Q  173 tgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagtta-agttgactgaaattcaataagtaagggtgt 271  Q
    |||||| ||||| |||||  ||| | |||| |||||||| |||||||||| |||||||||||||||||| || ||| |||||  || ||| ||||||  |    
T  39213437 tgattttaatggcaaaatatgtatcctttaataaaacactcttattaattatagttagtggagtagttatagatgattgaaaaacattaaataagggcat 39213338  T
Q  272 aatagtgggaaaaaataataaatgctgcattggtattgtaaa 313  Q
      |||||| ||||||||||||||| || ||||||||| ||||    
T  39213337 gttagtggaaaaaaataataaatgttgtattggtattataaa 39213296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 184 - 330
Target Start/End: Complemental strand, 7330587 - 7330442
Alignment:
Q  184 gtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaa 283  Q
    ||||||||| || |||| | |||||||| |||||||||| || |||||||||||||||| |||  | ||||| ||||  ||| ||| || || | | |||    
T  7330587 gtaaaattaatatcattcagtaaaacactcttattaattctaattagtggagtagttaa-ttggataaaatttaatacataaaggtatattactagaaaa 7330489  T
Q  284 aaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    ||||||| |||| ||||||| |||| |||| ||| ||||||||||||    
T  7330488 aaataattaatgttgcattgatattttaaaatgataattattttgag 7330442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 5731893 - 5731808
Alignment:
Q  147 attattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtg 232  Q
    ||||||| ||||||||||||||||||| |||| |||   |||||  ||| ||||||||||||||  ||||||||| ||||||||||    
T  5731893 attattaagaaaatgattaattgtgttcattttaataacaaaatgtgtatcatttactaaaacatccttattaatcgtagttagtg 5731808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 40616077 - 40616172
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtag----catttact-aaaacaca---cttattaattgtagttagtggagtagttaagt 244  Q
    |||||||||||| |||||||| ||||||||||||||||||    |||||||| ||||||||    |||||||||||| ||||| ||||||||||||    
T  40616077 aaatgattaattatgttgattgcaatggtaaaattagtagaaatcatttactaaaaacacattttttattaattgtaattagttgagtagttaagt 40616172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 195
Target Start/End: Complemental strand, 3076698 - 3076659
Alignment:
Q  156 aaaatgattaattgtgttgatttcaatggtaaaattagta 195  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  3076698 aaaatgattaattgtgttgatttcaatgataaaattagta 3076659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 31748031 - 31747969
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatt 177  Q
    ||||||||||| ||||||||| ||| ||| | ||||||| | |||||||||||||||||||||    
T  31748031 tcacaatattattcgtttaagatttatgcgtcattattaaggaaatgattaattgtgttgatt 31747969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 247
Target Start/End: Original strand, 5129227 - 5129328
Alignment:
Q  146 gattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagtt 245  Q
    |||| ||| |||||| |||| |||  ||| ||| ||||||||||||| ||  |||||||| ||||  ||||||||||||||||| | |||||||||| ||    
T  5129227 gattcttaagaaaataattagttgcattggtttgaatggtaaaattaatataatttactataacattcttattaattgtagttattagagtagttaaatt 5129326  T
Q  246 ga 247  Q
    ||    
T  5129327 ga 5129328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 18890559 - 18890647
Alignment:
Q  155 gaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaag 243  Q
    ||||||||||| ||| |||| ||| |||||||||||||||| |||||| ||||| |   ||||||||| || ||  |||||||||||||    
T  18890559 gaaaatgattagttgagttgtttttaatggtaaaattagtatcatttattaaaatatttttattaattttaattgttggagtagttaag 18890647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 25495026 - 25494947
Alignment:
Q  162 attaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagtta 241  Q
    |||||| | ||||||||||| ||||||||  ||  ||||||||||||||| ||  |||||  ||||||||||||||||||    
T  25495026 attaatagcgttgatttcaaaggtaaaatatgtgtcatttactaaaacactctcgttaatgatagttagtggagtagtta 25494947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 8493849 - 8493931
Alignment:
Q  162 attaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagt 244  Q
    |||| ||| ||| |||||||| ||||||||||||  ||||| ||| | || |||||||||| |||||| | ||||||||||||    
T  8493849 attagttgggttaatttcaatcgtaaaattagtatgatttattaatatactcttattaattttagttaatagagtagttaagt 8493931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 329
Target Start/End: Complemental strand, 29374170 - 29374128
Alignment:
Q  287 taataaatgctgcattggtattgtaaagtgagaattattttga 329  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||    
T  29374170 taataaatgttgcattgatattgtaaagtgataattattttga 29374128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 314
Target Start/End: Complemental strand, 41478813 - 41478733
Alignment:
Q  236 tagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaa--aataataaatgctgcattggtattgtaaag 314  Q
    |||||||||||  ||||||||||||| ||| ||| ||||||| | ||||  ||||||||||| ||||||| |||| |||||    
T  41478813 tagttaagttggatgaaattcaataaataaaggtataatagtagaaaaaataataataaatgttgcattgatattctaaag 41478733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 314
Target Start/End: Complemental strand, 41480179 - 41480099
Alignment:
Q  236 tagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaa--aataataaatgctgcattggtattgtaaag 314  Q
    |||||||||||  ||||||||||||| ||| ||| ||||||||  ||||  ||||||||||| ||||||| |||| |||||    
T  41480179 tagttaagttggatgaaattcaataaataaaggtataatagtgaaaaaaataataataaatgttgcattgatattctaaag 41480099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 330
Target Start/End: Complemental strand, 41492288 - 41492192
Alignment:
Q  236 tagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaa--ataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    |||||||||||  ||||||||||||| ||| | | |||||| || |||||  ||||||| ||||  |||| |||| |||||||| ||||||||||||    
T  41492288 tagttaagttggatgaaattcaataaataaagatataatagaggaaaaaataataataagtgctttattgatattctaaagtgacaattattttgag 41492192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 313
Target Start/End: Complemental strand, 32439902 - 32439822
Alignment:
Q  234 agtagttaagttgactgaaattcaataagtaagggtgtaatagtgg-gaaaaaataataaatgctgcattggtattgtaaa 313  Q
    |||||||||||||  ||||||||||||| || || | |||||||||  |||||| |||||||| || ||||||||| ||||    
T  32439902 agtagttaagttggatgaaattcaataaatagggatataatagtggaaaaaaaacaataaatgttgtattggtattctaaa 32439822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 148; Significance: 5e-78; HSPs: 99)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 39864248 - 39864045
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||| ||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  39864248 tcgtttaaagtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaatactcttattaattgtag 39864149  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||||||||||||||||||||  ||||||||||||| ||||||| ||||||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||    
T  39864148 ttagtggagtagttaagttggatgaaattcaataaataagggtataatagtggaaaaaaataataaatgttgcattgatattgtaaagtgacaattattt 39864049  T
Q  327 tgag 330  Q
    ||||    
T  39864048 tgag 39864045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 109 - 371
Target Start/End: Complemental strand, 12039237 - 12038975
Alignment:
Q  109 tccatttcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaa 208  Q
    ||||| ||||||||||| |||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  12039237 tccatctcacaatattagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtaacatttactaata 12039138  T
Q  209 cacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtatt 308  Q
    ||| ||||||||||||||||| ||||||| ||||||||  || |||||||||| ||||||| ||||||||| ||| ||||||||||| |||||| |||||    
T  12039137 cactcttattaattgtagttaatggagtatttaagttggatgtaattcaataaataagggtataatagtggaaaataataataaatgttgcattagtatt 12039038  T
Q  309 gtaaagtgagaattattttgagnnnnnnnnnnnntgctaaagagacaataattgtgagacgga 371  Q
    ||||||||| ||||||||||||            | |||||||||||||||||||||||||||    
T  12039037 gtaaagtgacaattattttgagaaaataaaaaaatactaaagagacaataattgtgagacgga 12038975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 115 - 379
Target Start/End: Original strand, 24991622 - 24991887
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| ||||||||||||||| || |||||||| | ||||||||||||||||||||||||| |||||||||| ||| |||||||| |||||  |    
T  24991622 tcacaatattagtcgtttaaggtttgtacacgattattaaggaaatgattaattgtgttgatttcaacggtaaaattaatagtatttactacaacacctt 24991721  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtggg-aaaaaataataaatgctgcattggtattgtaaa 313  Q
    |||||||||||||||||||| |||||||||||  ||||||||||||| ||| ||| |||||||||| ||||||||||||||| |||||| ||||||||||    
T  24991722 tattaattgtagttagtggaatagttaagttggatgaaattcaataaataaaggtataatagtgggaaaaaaataataaatgttgcattagtattgtaaa 24991821  T
Q  314 gtgagaattattttgagnnnnnnnnnnnntgctaaagagacaataattgtgagacggagggagtat 379  Q
    |||| ||||||||||||            ||||||||||||||||||||||||||||| |||||||    
T  24991822 gtgacaattattttgagaaggaaaaaaaatgctaaagagacaataattgtgagacggatggagtat 24991887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 130 - 329
Target Start/End: Complemental strand, 28749125 - 28748926
Alignment:
Q  130 tttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtta 229  Q
    |||||| |||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  28749125 tttaagatttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacccttattaattgtaatta 28749026  T
Q  230 gtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttga 329  Q
    || || | |||||||||  |||||||  |||| ||||||| ||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||    
T  28749025 gtagaattgttaagttggatgaaattttataaataagggtataatagtgggaaaaaataataaatgctgcattgctattataaagtgataattattttga 28748926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 117 - 378
Target Start/End: Original strand, 23168964 - 23169221
Alignment:
Q  117 acaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacactta 216  Q
    ||||||||| |||||||| ||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  23168964 acaatattagtcgtttaaagtttgtgcacgattattaagaaaataattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacatcctta 23169063  T
Q  217 ttaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtg 316  Q
    |||||| ||||||||  | |||||||||    ||||||||||||| |||| || |||||||||  |||| ||||||||| ||||||||||||||||||||    
T  23169064 ttaattatagttagttaaatagttaagtgaggtgaaattcaataaataagagtataatagtgg--aaaagtaataaatgttgcattggtattgtaaagtg 23169161  T
Q  317 agaattattttgagnnnnnnnnnnnntgctaaagagacaataattgtgagacggagggagta 378  Q
    | ||||||||||||            |||||||||||||| |||||||||||||||||||||    
T  23169162 acaattattttgag--aaaaaaaaaatgctaaagagacaacaattgtgagacggagggagta 23169221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 97 - 330
Target Start/End: Complemental strand, 31042964 - 31042731
Alignment:
Q  97 tttattattccttccatttcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtag 196  Q
    ||||||| ||| ||| | ||||||||||| || |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||     
T  31042964 tttattactccctccgtctcacaatattagtcatttaaggtttgtgcatgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtat 31042865  T
Q  197 catttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgc 296  Q
    ||||||||  || || |||||||||||||| ||||| |||| ||||||||| ||||||||||||| ||| | | | ||||||| |||||||||||||||     
T  31042864 catttactgtaatacccttattaattgtaggtagtgaagtaattaagttgaatgaaattcaataaataaagatatcatagtggaaaaaaataataaatga 31042765  T
Q  297 tgcattggtattgtaaagtgagaattattttgag 330  Q
    || |||| |||| |||||||| ||||||||||||    
T  31042764 tgtattgatattctaaagtgacaattattttgag 31042731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 117 - 326
Target Start/End: Complemental strand, 9307774 - 9307564
Alignment:
Q  117 acaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacactta 216  Q
    ||||||||| ||||||||||||||| || |||||||| | |||||||||| |||||||||||||||| |||||||| |||||||||||||||||| |||     
T  9307774 acaatattagtcgtttaaggtttgtacacgattattaaggaaatgattaactgtgttgatttcaatgataaaattaatagcatttactaaaacacccttg 9307675  T
Q  217 ttaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaa-aaaataataaatgctgcattggtattgtaaagt 315  Q
    ||||||||||||||||||||||||||||||  ||||||||||||| ||| ||| |||||||||||| |||||||||||| || ||||| ||| ||||| |    
T  9307674 ttaattgtagttagtggagtagttaagttggatgaaattcaataaataaaggtataatagtgggaaaaaaataataaatactacattgatatcgtaaaat 9307575  T
Q  316 gagaattattt 326  Q
    || ||||||||    
T  9307574 gacaattattt 9307564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 148 - 330
Target Start/End: Original strand, 20209842 - 20210024
Alignment:
Q  148 ttattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttga 247  Q
    |||||| |||||||||||||| |||||||||  || |||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||     
T  20209842 ttattaagaaaatgattaattatgttgattttgatagtaaaattagtatcatttactaaaacatccttattaattgtagttagtggagtagttaagttgg 20209941  T
Q  248 ctgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
     |||| |||||||| ||||||| | ||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  20209942 atgaagttcaataaataagggtattataatgggaaaaaataataaatgctgcattggtattctaaagtgacaattattttgag 20210024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 141 - 329
Target Start/End: Complemental strand, 7759338 - 7759150
Alignment:
Q  141 tgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagtt 240  Q
    |||| ||||||||  ||||| |||||||||||||||||||||||| |||||| || |||||||||||| || |||||||||||||||||||||| |||||    
T  7759338 tgcacgattattaaaaaaataattaattgtgttgatttcaatggtgaaattaatatcatttactaaaatactcttattaattgtagttagtggaatagtt 7759239  T
Q  241 aagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttga 329  Q
    ||||||| ||||||||||||| ||||||| ||||| ||| ||||||||||||||| ||||||  ||||||||||||| |||||||||||    
T  7759238 aagttgaatgaaattcaataaataagggtataataatggaaaaaaataataaatgatgcattattattgtaaagtgacaattattttga 7759150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 148 - 329
Target Start/End: Original strand, 40144849 - 40145030
Alignment:
Q  148 ttattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttga 247  Q
    |||||| ||||||||||||||||||||||||  |||||||||||| || ||||||||||||||| ||||||||||||||||| ||||||||||||||||     
T  40144849 ttattaagaaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacacccttattaattgtagttaatggagtagttaagttgg 40144948  T
Q  248 ctgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttga 329  Q
     |||| |||||||| ||||||| | ||| ||||||||||||||||||| ||||||| |||| |||||||| |||||||||||    
T  40144949 atgaagttcaataaataagggtattataatgggaaaaaataataaatgttgcattgatattctaaagtgacaattattttga 40145030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 127 - 330
Target Start/End: Original strand, 33733244 - 33733446
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||| ||||||||| |||||||| | ||||||||| |||||||||||||||||||||||||| || |||||||||||| ||  |||||||||||||    
T  33733244 tcgtttaaagtttgtgcacgattattaaggaaatgatta-ttgtgttgatttcaatggtaaaattattaacatttactaaaatacttttattaattgtag 33733342  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||||| |||| |||| || || ||||||||||||| ||||||| ||||| ||| ||| ||||||||||||| |||||||||| |||||||| ||||||||    
T  33733343 ttagtagagtggttaggtagaatgaaattcaataaataagggtataataatggaaaagaataataaatgcttcattggtattctaaagtgacaattattt 33733442  T
Q  327 tgag 330  Q
    ||||    
T  33733443 tgag 33733446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 155 - 330
Target Start/End: Original strand, 49223995 - 49224170
Alignment:
Q  155 gaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaat 254  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||  |||| |    
T  49223995 gaaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtagttaagttggatgaagt 49224094  T
Q  255 tcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    ||||||| ||||||| | ||| ||  ||||||||||||||| |||||| ||||| |||||||| ||||||||||||    
T  49224095 tcaataaataagggtattataatgaaaaaaaataataaatgttgcattagtattctaaagtgacaattattttgag 49224170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 37506264 - 37506058
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtag---catttactaaaacacacttattaattg 223  Q
    ||||||||||||  |||| | |||||| | ||||||||||||||||||||||  ||| |||||||||||    |||||||||||||||  ||||||||||    
T  37506264 tcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatgataaaattagtactatcatttactaaaacacttttattaattg 37506165  T
Q  224 tagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaatta 323  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||| | ||| ||| ||||||||||||||| ||||||| |||| |||||||| |||||    
T  37506164 tagttagtggagtagttaagttgaatgaaattcaataaataagggtattataatggaaaaaaataataaatgttgcattgatattctaaagtgacaatta 37506065  T
Q  324 ttttgag 330  Q
    |||||||    
T  37506064 ttttgag 37506058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 127 - 379
Target Start/End: Original strand, 16395028 - 16395278
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||| |||| |||||||| ||||||||||||||||||||||||  || |||||||||||| |||||||||||| || ||| ||||||||||    
T  16395028 tcgtttaaggtttatgcacgattattaagaaaatgattaattgtgttgattttgatagtaaaattagtatcatttactaaaatac-ctttttaattgtag 16395126  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    |||||||||||||||||||   ||||||||||||| ||| | | ||||| | | |||||||||||||| || |||||||||| |||||||| ||||||||    
T  16395127 ttagtggagtagttaagttagatgaaattcaataaataatgatataataat-gaaaaaaataataaatcctacattggtattctaaagtgacaattattt 16395225  T
Q  327 tgagnnnnnnnnnnnntgctaaagagacaataattgtgagacggagggagtat 379  Q
    ||||             | |||||||||||| |||||||||||||||||||||    
T  16395226 tgagaaaaagaaaagtgggtaaagagacaattattgtgagacggagggagtat 16395278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 118 - 329
Target Start/End: Original strand, 6023621 - 6023833
Alignment:
Q  118 caatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttat 217  Q
    |||||||| |||||||| ||||||||  |||||||| | ||||| |||||||||||||||||||||||||| |||||||| |||||||||| ||  ||||    
T  6023621 caatattagtcgtttaatgtttgtgcgcgattattacggaaatgtttaattgtgttgatttcaatggtaaatttagtagcttttactaaaatacctttat 6023720  T
Q  218 taattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaat-aataaatgctgcattggtattgtaaagtg 316  Q
    |||||||||||| ||||||||||||||||  ||||||||||||  | || || ||||||||| ||||||| ||||||| || ||||| ||||||||  ||    
T  6023721 taattgtagttattggagtagttaagttggatgaaattcaatacatgagagtataatagtggaaaaaaataaataaatactacattgatattgtaagatg 6023820  T
Q  317 agaattattttga 329  Q
    | |||||||||||    
T  6023821 ataattattttga 6023833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 162 - 330
Target Start/End: Original strand, 14757610 - 14757777
Alignment:
Q  162 attaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataa 261  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||   ||||||| |||||    
T  14757610 attaattgtgttgatttcaacgataaaattagtaacatttactaaaacactcttattaattgtagttagtgaagtagttaagttcgatgaaatttaataa 14757709  T
Q  262 gtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
     ||||||| ||||||||| ||||||| |||||| ||||||| ||||||||||| || ||||||||||||    
T  14757710 ataagggtataatagtggaaaaaaattataaattctgcatttgtattgtaaag-gacaattattttgag 14757777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 119 - 303
Target Start/End: Original strand, 44707733 - 44707917
Alignment:
Q  119 aatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttatt 218  Q
    ||||||| |||||||| |||| |||| |||||||||  |||||||||||| | |||||||||||| |||||||||||| ||||||||||||||| |||||    
T  44707733 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattatattgatttcaatgataaaattagtagtatttactaaaacacatttatt 44707832  T
Q  219 aattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattg 303  Q
    |||||||||||||| || ||||||||||  ||||||||||||| ||| ||| ||||||||| || |||||||||||  |||||||    
T  44707833 aattgtagttagtgaagcagttaagttggatgaaattcaataaataaaggtataatagtggaaacaaataataaatattgcattg 44707917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 26093531 - 26093328
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||| || |||||| ||||| |  ||||||||||||||    
T  26093531 tcgtttaagatttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattaatatcatttattaaaatatccttattaattgtag 26093432  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    |||||| |||| |||||||   |||| |||||||| ||||||| ||||| ||| |||| |||||||||| | |||| ||||  |||||||| |||| |||    
T  26093431 ttagtgaagtaattaagttagatgaagttcaataaataagggtataataatggaaaaatataataaatgttacattagtatactaaagtgacaattgttt 26093332  T
Q  327 tgag 330  Q
    ||||    
T  26093331 tgag 26093328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 127 - 327
Target Start/End: Complemental strand, 52429481 - 52429279
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||||||||||||| |||||| | | ||||||||||||  ||||||| | |||||||| ||| |  |||||| ||||| || ||||||||||||||    
T  52429481 tcgtttaaggtttgtgcacgattatgaaggaaatgattaatttggttgattacgatggtaaatttaatgtcatttattaaaatacccttattaattgtag 52429382  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtggg--aaaaaataataaatgctgcattggtattgtaaagtgagaattat 324  Q
    ||||||||||||||||||||| ||||||||| ||| ||||||| ||||| || |  ||||||||||||||| ||||||| ||||||||||||| ||||||    
T  52429381 ttagtggagtagttaagttgaatgaaattcattaaataagggtataataatgagaaaaaaaataataaatgttgcattgatattgtaaagtgacaattat 52429282  T
Q  325 ttt 327  Q
    |||    
T  52429281 ttt 52429279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 129 - 303
Target Start/End: Original strand, 34031510 - 34031684
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    ||||||||||||||||||||||||| | ||||||||| ||||||||||| |||||||||||||| || |||||||||||| ||  |||||||||||||||    
T  34031510 gtttaaggtttgtgcatgattattaaggaaatgattacttgtgttgattccaatggtaaaattaatatcatttactaaaataccgttattaattgtagtt 34031609  T
Q  229 agtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattg 303  Q
    |||| | |||| | ||||| ||||||||||||| |||| || ||||| ||| |||| ||||||||||||||||||    
T  34031610 agtgtaatagtaaggttgaatgaaattcaataaataagagtataataatggaaaaacataataaatgctgcattg 34031684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 127 - 329
Target Start/End: Original strand, 31978633 - 31978832
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||| ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| || || ||||||||  |  |||||||||| |||    
T  31978633 tcgtttaaagtttgtgcacgattattaagaaaaagattaattgtgttgatttcaatggtaaaattaatatcacttactaaactattcttattaattatag 31978732  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||| ||||||||||||||||| | ||||||| ||| ||||||| ||||| ||||||||   || |||| || ||||||||||||||||| | ||||||||    
T  31978733 ttaatggagtagttaagttgaattaaattcattaaataagggtataataatgggaaaa---aaaaaatactacattggtattgtaaagtaacaattattt 31978829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 195 - 378
Target Start/End: Complemental strand, 35367871 - 35367693
Alignment:
Q  195 agcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaat 294  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||   ||||||||||||| ||||||| ||||||||  ||| | ||||||||    
T  35367871 agcatttactaaaacacccttattaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataatagtgaaaaagactaataaat 35367772  T
Q  295 gctgcattggtattgtaaagtgagaattattttgagnnnnnnnnnnnntgctaaagagacaataattgtgagacggagggagta 378  Q
    | | ||||||||||||||||||| ||||||||||||            ||||||||||||||||||||||||||||||||||||    
T  35367771 gtttcattggtattgtaaagtgacaattattttgag-----aaaaaaatgctaaagagacaataattgtgagacggagggagta 35367693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 127 - 324
Target Start/End: Complemental strand, 917161 - 916967
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||||||||||||| ||||||||   |||||||||||| ||||||||| ||||||||||||| || |||||||||||| || ||||||||||||||    
T  917161 tcgtttaaggtttgtgcacgattattaaataaatgattaattatgttgatttaaatggtaaaattaatatcatttactaaaatacccttattaattgtag 917062  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattat 324  Q
    ||||| || |||||||||||  ||||||| ||||| |||||||  |||| |||   |||| |||||||||||||||| |||| |||||| | ||||||    
T  917061 ttagtagattagttaagttgcatgaaatttaataaataagggtaaaataatgg---aaaaaaataaatgctgcattgatattctaaagtaacaattat 916967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 38787478 - 38787272
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||| |||| |||||||| | |||||||| |||||||||||||  ||||||||| ||||| ||||| | ||||||  |||||||||| |||    
T  38787478 tcgtttaaggtttatgcacgattattaaggaaatgattgattgtgttgattttgatggtaaaactagtatcatttgccaaaacatccttattaattatag 38787379  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtggg---aaaaaataataaatgctgcattggtattgtaaagtgagaatta 323  Q
    |||||||||||||||| |||  ||||||||||||| ||||||| ||||| ||||   |||||| |||||||  ||||||| | || |||||||| |||||    
T  38787378 ttagtggagtagttaaattggatgaaattcaataaataagggtataataatgggaaaaaaaaaaaataaattttgcattgcttttctaaagtgacaatta 38787279  T
Q  324 ttttgag 330  Q
    |||||||    
T  38787278 ttttgag 38787272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 132 - 327
Target Start/End: Complemental strand, 24881008 - 24880809
Alignment:
Q  132 taaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagt 231  Q
    |||||||||||||| ||||||| | |||||||| ||| ||||||||||||||||||||||| || |||||||||||| ||  ||||||||||||||||||    
T  24881008 taaggtttgtgcataattattacggaaatgattgattatgttgatttcaatggtaaaattaatatcatttactaaaatacttttattaattgtagttagt 24880909  T
Q  232 ggagtagt---taagttgactgaaattcaataagtaagggtgtaatagtgggaaa--aaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||||||||   |||||||  ||||||||||||| | ||| | ||||| ||| |||  |||||||||||||| || ||||||| |||||||| ||||||||    
T  24880908 ggagtagttagtaagttggatgaaattcaataaattaggatataataatggaaaaagaaataataaatgctaca-tggtattctaaagtgacaattattt 24880810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 127 - 316
Target Start/End: Complemental strand, 2572605 - 2572416
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||| ||||||| | ||||||||  | ||||||||||||| ||||||||||||||||||||| || |||||||| ||| ||| |||||||||||||    
T  2572605 tcgtttaaagtttgtgtacgattattaaaataatgattaattgtattgatttcaatggtaaaattaatatcatttact-aaatacaattattaattgtag 2572507  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaat-aataaatgctgcattggtattgtaaagtg 316  Q
    ||||||||||||||||||||| ||||||||||||| |||   | ||||| ||| ||||||| |||||||  ||||||| |||| |||||||    
T  2572506 ttagtggagtagttaagttgaatgaaattcaataaataaaaatataataatggaaaaaaataaataaatattgcattgatattttaaagtg 2572416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 155 - 308
Target Start/End: Original strand, 8896341 - 8896495
Alignment:
Q  155 gaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaat 254  Q
    |||||||||| ||||||||||||||||||||||||||| || |||||||||||| | | ||||||||||||||||||||||| |||||||||  ||||||    
T  8896341 gaaaatgattgattgtgttgatttcaatggtaaaattaatatcatttactaaaatatatttattaattgtagttagtggagtggttaagttggatgaaat 8896440  T
Q  255 tcaataagtaagggtgtaatagtggg-aaaaaataataaatgctgcattggtatt 308  Q
    ||||||| ||| ||| ||||  |||| ||||||||||||||| ||||||| ||||    
T  8896441 tcaataaataaaggtataatcatgggaaaaaaataataaatgttgcattgatatt 8896495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 216 - 330
Target Start/End: Complemental strand, 6785304 - 6785190
Alignment:
Q  216 attaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagt 315  Q
    ||||||||||||||||||||||||||||||   ||||||||||||| ||||||| ||||||||| ||||||||||||||| ||||| |||||||||||||    
T  6785304 attaattgtagttagtggagtagttaagtttgatgaaattcaataaataagggtataatagtggaaaaaaataataaatgttgcataggtattgtaaagt 6785205  T
Q  316 gagaattattttgag 330  Q
    || ||||||||||||    
T  6785204 gacaattattttgag 6785190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 156 - 269
Target Start/End: Complemental strand, 15699230 - 15699117
Alignment:
Q  156 aaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaatt 255  Q
    |||||||||||||||||||||||  |||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||  |||| ||    
T  15699230 aaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacacccttattaattgtagttagtggagtagttaagttggatgaagtt 15699131  T
Q  256 caataagtaagggt 269  Q
    |||||| |||||||    
T  15699130 caataaataagggt 15699117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 127 - 324
Target Start/End: Original strand, 32825973 - 32826171
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||  |||| | |||||| | ||||||||||| ||||||||||  ||||||||||||||| |||||||||||||||  ||||||||||||     
T  32825973 tcgtttaaggttgatgcacggttattaaggaaatgattaat-gtgttgattttgatggtaaaattagtatcatttactaaaacacctttattaattgtaa 32826071  T
Q  227 ttagt---ggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaatta 323  Q
    |||||   |||||||||||||||  |||| |||||||| ||||||| | ||| | ||||||||||||||||| || |||||||||  ||||||| |||||    
T  32826072 ttagtggaggagtagttaagttggatgaagttcaataaataagggtattataat-ggaaaaaataataaatgttgtattggtatttcaaagtgacaatta 32826170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 157 - 330
Target Start/End: Complemental strand, 36702028 - 36701857
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattc 256  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||  | |||||||||||||||||||||| | ||||||||   ||||||||    
T  36702028 aaatgattaattatgttgatttcaatggtaaaattagtatcatttactaaaatgcccttattaattgtagttagtggaatcgttaagtttgatgaaattc 36701929  T
Q  257 aataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    ||||| |||| || ||||| |||  |||||||| || || ||||||| |||| || ||||| ||||||| ||||    
T  36701928 aataaataagagtataataatgg--aaaaataacaagtgatgcattgatattctacagtgacaattattatgag 36701857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 157 - 330
Target Start/End: Complemental strand, 36718132 - 36717961
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattc 256  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||  | |||||||||||||||||||||| | ||||||||   ||||||||    
T  36718132 aaatgattaattatgttgatttcaatggtaaaattagtatcatttactaaaatgcccttattaattgtagttagtggaatcgttaagtttgatgaaattc 36718033  T
Q  257 aataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    ||||| |||| || ||||| |||  |||||||| || || ||||||| |||| || ||||| ||||||| ||||    
T  36718032 aataaataagagtataataatgg--aaaaataacaagtgatgcattgatattctacagtgacaattattatgag 36717961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 141 - 275
Target Start/End: Complemental strand, 37276584 - 37276450
Alignment:
Q  141 tgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagtt 240  Q
    |||| |||||||| | |||||||||| |||||||||||  ||||||||||||||| | ||||||||||||| |||||||||||||||||||||| |||||    
T  37276584 tgcacgattattaaggaaatgattaactgtgttgattttgatggtaaaattagtatcgtttactaaaacacccttattaattgtagttagtggaatagtt 37276485  T
Q  241 aagttgactgaaattcaataagtaagggtgtaata 275  Q
    || |||  ||||||||||||| ||||||| |||||    
T  37276484 aaattggatgaaattcaataaataagggtataata 37276450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 146 - 275
Target Start/End: Original strand, 6160459 - 6160588
Alignment:
Q  146 gattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagtt 245  Q
    |||| ||| ||||||||||||||||||||||||||||| |||||||||||  ||||||||||| || ||||||||||||||||| |||| ||||||||||    
T  6160459 gatttttaagaaaatgattaattgtgttgatttcaatgataaaattagtattatttactaaaatactcttattaattgtagttaatggaatagttaagtt 6160558  T
Q  246 gactgaaattcaataagtaagggtgtaata 275  Q
    || || ||||||||||  |||||| |||||    
T  6160559 gaatgtaattcaataaacaagggtataata 6160588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 129 - 330
Target Start/End: Complemental strand, 10495973 - 10495773
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    ||||||||||| || | ||||||||  ||||| ||||||| |||||||||  ||||||||||||||| |||||||||||||||  |||||||||||| ||    
T  10495973 gtttaaggtttatgtaagattattaaaaaaattattaattttgttgattttgatggtaaaattagtatcatttactaaaacac-tttattaattgtaatt 10495875  T
Q  229 agtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttg 328  Q
    ||||||||||||||||||  ||||||||||||| |||   | ||||| |   ||||||||||   || ||||||| |||| |||||||| ||||||||||    
T  10495874 agtggagtagttaagttggatgaaattcaataaataaatatataataatataaaaaaataatcggtgttgcattgatattataaagtgacaattattttg 10495775  T
Q  329 ag 330  Q
    ||    
T  10495774 ag 10495773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 130 - 327
Target Start/End: Original strand, 13579605 - 13579801
Alignment:
Q  130 tttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtta 229  Q
    |||||||||| |||||||||||||   ||||||||||||||||||||||  |||  || |||| || ||||||| ||||||| | |||||||||||||||    
T  13579605 tttaaggtttatgcatgattattaaagaaatgattaattgtgttgattttgatgacaatattaatatcatttacaaaaacacccatattaattgtagtta 13579704  T
Q  230 gtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
    |||||||| |||||||   ||||||||||||| ||||||| ||||| |   ||| ||||||||||  ||||| |||||| |||||||| |||||||||    
T  13579705 gtggagtatttaagtttgatgaaattcaataaataagggtataataat-aaaaataataataaatattgcatcggtattttaaagtgacaattatttt 13579801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 127 - 327
Target Start/End: Complemental strand, 45331478 - 45331276
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||   ||| | |||||| |||||| ||||||| |||||||||  |||||||||||| || ||||||||||||||| ||||||||||||||    
T  45331478 tcgtttaaggttgacgcacggttattaagaaaataattaattatgttgattttgatggtaaaattaatatcatttactaaaacacccttattaattgtag 45331379  T
Q  227 ttagtggag---tagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaatta 323  Q
    ||| |||||   |||||||||||  |||| |||||||| | |||||   ||| | ||||||||||||||||| |||||||||||| |||||| | |||||    
T  45331378 ttaatggaggaatagttaagttggatgaagttcaataaattagggtaatataat-ggaaaaaataataaatgttgcattggtattttaaagtaacaatta 45331280  T
Q  324 tttt 327  Q
    ||||    
T  45331279 tttt 45331276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 129 - 327
Target Start/End: Complemental strand, 11450018 - 11449824
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    |||||||||||||||| |||||||| | ||||| |||||| ||||||||||||||||||||||| ||  |||| ||| |||||| |||||||||||||||    
T  11450018 gtttaaggtttgtgcacgattattaaggaaatggttaattatgttgatttcaatggtaaaattaata--attttctataacacatttattaattgtagtt 11449921  T
Q  229 agtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
    | | ||||||| || |||  ||||||||||||| ||| ||| ||||| | ||||| || || ||||| |||||| ||||| |||||||| || ||||||    
T  11449920 aatagagtagtaaaattggatgaaattcaataaataa-ggtataataat-ggaaagaaaaaaaaatgttgcattagtattctaaagtgacaactatttt 11449824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 115 - 246
Target Start/End: Complemental strand, 12151325 - 12151194
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||  |||||||||||||||| |||||||||| | | || ||||||| |||||||||||||| ||||||||||| |||||||||||| |   |    
T  12151325 tcacaatatttgtcgtttaaggtttgtgtatgattattaaggagattattaattatgttgatttcaatgataaaattagtatcatttactaaaatattgt 12151226  T
Q  215 tattaattgtagttagtggagtagttaagttg 246  Q
     |||||||||||||||||||| ||||||||||    
T  12151225 aattaattgtagttagtggagcagttaagttg 12151194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 127 - 327
Target Start/End: Original strand, 30754922 - 30755123
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||| ||| |||| |||||||| | |||||||||||||||||||||| || |||||||||  ||  ||||||||||| |   ||||||||| |||    
T  30754922 tcgtttaagatttatgcacgattattaaggaaatgattaattgtgttgattttaagggtaaaatttatattatttactaaaatatcattattaattatag 30755021  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtggga-aaaaataataaatgctgcattggtattgtaaagtgagaattatt 325  Q
    |||||| | ||||||||||   ||||||||||||| ||| ||| ||||| ||  | ||||| |||| ||| |||||||||||| |||||||| |||||||    
T  30755022 ttagtgaaatagttaagttagatgaaattcaataaataaaggtataataatgaaagaaaaaaaatacatgatgcattggtattctaaagtgataattatt 30755121  T
Q  326 tt 327  Q
    ||    
T  30755122 tt 30755123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 157 - 330
Target Start/End: Original strand, 41121836 - 41122007
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattc 256  Q
    ||||||||||||||||||||||  ||||||||||||| |  ||||||||||| || |||||||||||||||||||||||||||    |||| |||||||     
T  41121836 aaatgattaattgtgttgattttgatggtaaaattagcataatttactaaaatacccttattaattgtagttagtggagtagt----ttga-tgaaattt 41121930  T
Q  257 aataa---gtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    |||||    ||||||| ||||| ||  ||||||||||||||| || |||| |||| |||||||| ||||||||||||    
T  41121931 aataaattataagggtataataatgaaaaaaaataataaatgttgtattgatattttaaagtgacaattattttgag 41122007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 129 - 309
Target Start/End: Complemental strand, 42410129 - 42409950
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    ||||||||||  |||| | ||||||  |||||||||||||||||||||||  |||||||||||| || ||||||||||| ||| ||||||||||||||||    
T  42410129 gtttaaggttgatgcacggttattaaaaaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaagcacccttattaattgtagtt 42410030  T
Q  229 agtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattg 309  Q
    ||| |  ||||||||| |  |||| |||||||| ||| | | | ||| | | ||||||||||||||||||||||| |||||    
T  42410029 agttggatagttaagtaggatgaagttcaataaataaagatattataat-gaaaaaaataataaatgctgcattgatattg 42409950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 224 - 330
Target Start/End: Complemental strand, 4659816 - 4659711
Alignment:
Q  224 tagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaatta 323  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||| | ||||||| |||||||||||  |||| ||||||||||||||||||||| |||||    
T  4659816 tagttagtggagtaattaagttgaatgaaattcaataaataaggatataatagt-ggaaaaaataaataatgttgcattggtattgtaaagtgacaatta 4659718  T
Q  324 ttttgag 330  Q
    |||||||    
T  4659717 ttttgag 4659711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 127 - 330
Target Start/End: Original strand, 21909987 - 21910192
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||| ||||  ||||||| | ||||||||||||||||||||||  ||||||||||||||| | ||| ||||||||| |||||||| | |||    
T  21909987 tcgtttaaggtttatgcacaattattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcgtttgctaaaacac-cttattaactatag 21910085  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaa----aataataaatgctgcattggtattgtaaagtgagaatt 322  Q
    || | ||||||||||||||   || |||||||||| ||| ||| ||||| || |||||    |||||||||||  |||||| |||| |||||||| ||||    
T  21910086 tttgaggagtagttaagtttgatggaattcaataaataa-ggtataataatgagaaaaaaataataataaatgtggcattgatattttaaagtgacaatt 21910184  T
Q  323 attttgag 330  Q
    ||| ||||    
T  21910185 attctgag 21910192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 127 - 275
Target Start/End: Original strand, 44761512 - 44761660
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||  ||||||| ||||||| ||  ||||||||||||| |||| |||| |||| |||||||| || |||||||||||| |   ||||||||| |||    
T  44761512 tcgtttagagtttgtgtatgattaataaaaaaatgattaattatgttaattttaatgataaaattaatatcatttactaaaatatctttattaattatag 44761611  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaata 275  Q
    |||||||| | |||||||||| ||||||||||||| ||||||| |||||    
T  44761612 ttagtggaatggttaagttgaatgaaattcaataaataagggtataata 44761660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 315
Target Start/End: Original strand, 22856267 - 22856406
Alignment:
Q  176 tttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaata 275  Q
    |||||||  |||||||| || |||||||||||| || || |||||||||||||||||||||||||||| ||  ||||||||||||| |||  || |||||    
T  22856267 tttcaatcataaaattaataccatttactaaaataccctaattaattgtagttagtggagtagttaagctggatgaaattcaataaataaaagtataata 22856366  T
Q  276 gtgggaaaaaataataaatgctgcattggtattgtaaagt 315  Q
    |||  ||||||||||||||| || |||| |||| ||||||    
T  22856367 gtgcaaaaaaataataaatgttgaattgatattttaaagt 22856406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 129 - 275
Target Start/End: Original strand, 4441586 - 4441732
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    ||||||| |||||||||  |||||| |||||| |||||||||| |||||| ||||||||||||| | |  ||||||||||||| ||| ||||||||||||    
T  4441586 gtttaagatttgtgcatctttattaagaaaataattaattgtggtgattttaatggtaaaattaatcgtctttactaaaacacccttgttaattgtagtt 4441685  T
Q  229 agtggagtagttaagttgactgaaattcaataagtaagggtgtaata 275  Q
    ||||||||| |||| ||   ||||||| ||||| ||| ||| |||||    
T  4441686 agtggagtaattaaattagatgaaatttaataaataaaggtataata 4441732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 127 - 286
Target Start/End: Original strand, 5179380 - 5179539
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||||| || |||| |||  ||||||||||||||||||||||||||| | ||||| |||| |||||||||||     | ||||||||||||    
T  5179380 tcgtttaaggtttgtacacgattcttaacaaaatgattaattgtgttgatttcaatagcaaaatgagtatcatttactaaagttttcatattaattgtag 5179479  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaa 286  Q
    |||||||||||| ||| |||  |||||||||  || |||| || ||| ||| ||||||||    
T  5179480 ttagtggagtagataaattggatgaaattcaggaaataagagtataacagtcggaaaaaa 5179539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 136 - 326
Target Start/End: Complemental strand, 27897083 - 27896893
Alignment:
Q  136 gtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggag 235  Q
    |||||||||||||| ||| | |||| |||||  |||||||||| |||| |||||||||||  |||||  |||| |  |||||||||| ||||||||||||    
T  27897083 gtttgtgcatgatttttaaggaaataattaaacgtgttgattttaatgataaaattagtataatttatcaaaatattcttattaattatagttagtggag 27896984  T
Q  236 tagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    || || |||||  ||||||| ||||| ||| ||| ||||||| | ||||||||||| || ||| || | |||| |||||||| || |||||    
T  27896983 taatttagttggatgaaatttaataaataaaggtataatagtcgaaaaaaataatatatactgaatagatattctaaagtgataaatattt 27896893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 127 - 261
Target Start/End: Original strand, 32970548 - 32970682
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||||||| ||  | |||||||| ||||||||||||||||||||||||||||| |||||||| ||  ||||||||||| || | |||||||||| |    
T  32970548 tcgtttaaggttcgtatacgattattaagaaaatgattaattgtgttgatttcaatgataaaattaatattatttactaaaatactcgtattaattgttg 32970647  T
Q  227 ttagtggagtagttaagttgactgaaattcaataa 261  Q
    |||||  | || ||||||||  | |||||||||||    
T  32970648 ttagtaaaataattaagttggataaaattcaataa 32970682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 105 - 330
Target Start/End: Original strand, 35682765 - 35682977
Alignment:
Q  105 tccttccatttcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttact 204  Q
    ||||||||| ||| |||| || |||| || |||||||||| |||| |||   ||| ||||||||||||||||||||||| ||| ||||||| |||||| |    
T  35682765 tccttccatctcaaaataatagtcgtata-ggtttgtgcacgatttttaacgaaaagattaattgtgttgatttcaatgataacattagtatcatttatt 35682863  T
Q  205 aaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattgg 304  Q
    |||          ||||| || ||| ||||||||||||||||  ||||||||||||| ||||||| ||||||| ||||||||||||||||  |||||||     
T  35682864 aaa----------taatttta-ttactggagtagttaagttggatgaaattcaataaataagggtataatagt-ggaaaaaataataaatattgcattga 35682951  T
Q  305 tattgtaaagtgagaattattttgag 330  Q
    |||| |||| ||  ||||||||||||    
T  35682952 tattctaaattggcaattattttgag 35682977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 162 - 327
Target Start/End: Complemental strand, 27721634 - 27721470
Alignment:
Q  162 attaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataa 261  Q
    ||||| ||||||||||| ||||||||||||| |   ||||| ||||  ||   ||||||||||||||||| || ||||||| |||  | |||||||||||    
T  27721634 attaaatgtgttgattttaatggtaaaattatttttatttattaaagtaccaatattaattgtagttagtagaatagttaaattggataaaattcaataa 27721535  T
Q  262 gtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
     |||  || ||||||||| ||||||||||||||| |||||| |||||||||||||  |||||||||    
T  27721534 ataaaagtataatagtgg-aaaaaataataaatgatgcatttgtattgtaaagtggcaattatttt 27721470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 197 - 327
Target Start/End: Complemental strand, 37539194 - 37539066
Alignment:
Q  197 catttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgc 296  Q
    ||||||||| ||||| ||| ||||||||||||||| |||||||||||||   ||||||||||||| ||||||| | ||||||| ||||||| ||||||      
T  37539194 catttactacaacactcttgttaattgtagttagtagagtagttaagtttgatgaaattcaataaataagggtatcatagtggaaaaaaattataaat-- 37539097  T
Q  297 tgcattggtattgtaaagtgagaattatttt 327  Q
    | |||||||||| |||| | | |||||||||    
T  37539096 tacattggtattctaaaataacaattatttt 37539066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 327
Target Start/End: Complemental strand, 9379339 - 9379169
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagt-ggagtagttaagttgactgaaatt 255  Q
    ||||||||||||||  |||||| |||| |||||||| || |||||| ||||| | | |||||||||||||||||| ||||||||||||||   |||||||    
T  9379339 aaatgattaattgtaatgattttaatgataaaattaatatcatttattaaaatatatttattaattgtagttagtgggagtagttaagtttgatgaaatt 9379240  T
Q  256 caataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
     ||||| ||  ||| ||||| | |||||||  |||||||  ||||||| |||| |||| ||| |||||||||    
T  9379239 taataaatataggtataataat-ggaaaaataaataaatattgcattgatattctaaaatgacaattatttt 9379169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 330
Target Start/End: Complemental strand, 52837364 - 52837217
Alignment:
Q  180 aatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgg 279  Q
    ||||||||||||| |  ||  |||||||| || |||||||||||||| |||||||||||||||  ||| ||||||||||||| ||| ||| ||||| ||     
T  52837364 aatggtaaaattaatttcaactactaaaatactcttattaattgtagctagtggagtagttaatatgaatgaaattcaataattaaaggtataataatga 52837265  T
Q  280 gaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    ||||||| |||  ||| ||||||| |||| |||||||  ||||||||||||    
T  52837264 gaaaaaa-aat--atgttgcattgctattataaagtggcaattattttgag 52837217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 165 - 330
Target Start/End: Complemental strand, 7351735 - 7351573
Alignment:
Q  165 aattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagta 264  Q
    |||||||||||||| |||| |||||||| ||  ||||||||||| |  |||||||||| ||||||||||| || ||||||||    ||||||||||| ||    
T  7351735 aattgtgttgattttaatgataaaattaatattatttactaaaataaccttattaattctagttagtggaataattaagttggacaaaattcaataaata 7351636  T
Q  265 agggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    || || ||||| |  |||||||| ||||| | |||||| ||||| |||| ||| ||||||||||||    
T  7351635 agagtataataat--gaaaaaatgataaa-gttgcattagtattctaaaatgacaattattttgag 7351573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 130 - 207
Target Start/End: Complemental strand, 27687375 - 27687298
Alignment:
Q  130 tttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaa 207  Q
    |||||||||||||||  |||||||  |||||||||| |||||||||||||||||||||||||| ||  ||||||||||    
T  27687375 tttaaggtttgtgcacaattattaaaaaaatgattagttgtgttgatttcaatggtaaaattaatattatttactaaa 27687298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 261
Target Start/End: Complemental strand, 29074992 - 29074887
Alignment:
Q  156 aaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaatt 255  Q
    |||||||||| |||||||||||| ||||||||||||| || |||||| |||||||  | |||||||||| ||||  | | |||||||||||  |||||||    
T  29074992 aaaatgattagttgtgttgattttaatggtaaaattaatatcatttattaaaacatccatattaattgttgttaacgtaatagttaagttggatgaaatt 29074893  T
Q  256 caataa 261  Q
    ||||||    
T  29074892 caataa 29074887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 326
Target Start/End: Original strand, 9412837 - 9412982
Alignment:
Q  180 aatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgg 279  Q
    |||||||||||||| |||||||| ||||| |  || |||||||||||||| |||| |||||  ||||  ||||||||||||| |||   ||||||||||     
T  9412837 aatggtaaaattagaagcatttaataaaatattctgattaattgtagttaatggaatagttgggttggatgaaattcaataaataa--ttgtaatagtga 9412934  T
Q  280 gaaaaaat-aataaatgctgcattggtattgtaaagtgagaattattt 326  Q
     || |||| |||||||  |||||| |||||||||||||| ||||||||    
T  9412935 aaataaataaataaattttgcattagtattgtaaagtgacaattattt 9412982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 17988572 - 17988654
Alignment:
Q  160 tgattaattgtgttgatttcaatggtaaaattag--tagcatttactaaaacacacttattaattgtagttagtggagtagtt 240  Q
    |||||||||||||||||||||||| |||||||||  ||  ||||||||||| || ||||||||||||||||| || |||||||    
T  17988572 tgattaattgtgttgatttcaatgttaaaattagtatattatttactaaaatactcttattaattgtagttaatgaagtagtt 17988654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 127 - 210
Target Start/End: Original strand, 43500765 - 43500848
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaaca 210  Q
    ||||||||||||| |||| |||||||| | |||| |||||||||||||||||  |||||| |||||||  ||||||||||||||    
T  43500765 tcgtttaaggtttatgcacgattattaaggaaattattaattgtgttgattttgatggtataattagtttcatttactaaaaca 43500848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 263 - 330
Target Start/End: Original strand, 43500857 - 43500924
Alignment:
Q  263 taagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    ||||||||||||| ||| ||| |||||||||||||||||| ||||| |||||||| ||||||||||||    
T  43500857 taagggtgtaataatggaaaataataataaatgctgcattagtattctaaagtgacaattattttgag 43500924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 327
Target Start/End: Complemental strand, 3260693 - 3260529
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattc 256  Q
    ||||||||| ||||||||||||||||  ||||| |||||  | |||||||      ||||||||||||||||||||||| |||||||||   |||||||     
T  3260693 aaatgattagttgtgttgatttcaataataaaagtagtattaattactaac-----cttattaattgtagttagtggagaagttaagtttgatgaaattg 3260599  T
Q  257 aataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
    ||||| ||||  | |||||||  ||| |||||||||||  || ||| ||||| |||||||| |||||||||    
T  3260598 aataaataagtttataatagt-agaacaaataataaatattgtattagtattctaaagtgataattatttt 3260529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 34688858 - 34688956
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaatt 255  Q
    ||||||||||||  |||||||| |||| ||||||||||| | ||||||||| ||  |||||||||| |||||||| || ||||||||| || |||||||    
T  34688858 aaatgattaatttggttgatttaaatgataaaattagtatcgtttactaaaccaggcttattaattttagttagttgaatagttaagtggagtgaaatt 34688956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 34693386 - 34693484
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaatt 255  Q
    ||||||||||||  |||||||| |||| ||||||||||| | ||||||||| ||  |||||||||| |||||||| || ||||||||| || |||||||    
T  34693386 aaatgattaatttggttgatttaaatgataaaattagtatcgtttactaaaccaggcttattaattttagttagttgaatagttaagtggagtgaaatt 34693484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 238
Target Start/End: Complemental strand, 3312218 - 3312137
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtag 238  Q
    |||||||||||||||||||||| |||| | ||||||||| ||||||||| || |    ||||||||||||||||||||||||    
T  3312218 aaatgattaattgtgttgattttaatgattaaattagtatcatttactataatattgatattaattgtagttagtggagtag 3312137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 4659903 - 4659838
Alignment:
Q  118 caatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatg 183  Q
    |||| ||| ||||||| ||||| ||||||| ||||| |||||||||||||||||||||||||||||    
T  4659903 caatgttaatcgtttagggtttatgcatgaatattaagaaaatgattaattgtgttgatttcaatg 4659838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 22181452 - 22181371
Alignment:
Q  148 ttattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtta 229  Q
    |||||| | ||||||||| ||| ||| |||||||||||||||||| || ||||||||||||||| |||| | ||||||||||    
T  22181452 ttattaaggaaatgattagttgagttcatttcaatggtaaaattaatatcatttactaaaacacccttagttattgtagtta 22181371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 198 - 286
Target Start/End: Original strand, 25089137 - 25089226
Alignment:
Q  198 atttactaaaacacactt-attaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaa 286  Q
    |||||||||||||  ||| ||||||||||||||||| |||||||||||||  ||||||||||||| ||||||| || || ||| ||||||    
T  25089137 atttactaaaacatcctttattaattgtagttagtgaagtagttaagttggatgaaattcaataaataagggtatactaatggaaaaaaa 25089226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 217 - 330
Target Start/End: Original strand, 26256159 - 26256272
Alignment:
Q  217 ttaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtg 316  Q
    ||||||||||||| | ||||||||||||||  ||||| |||||||  |||  | ||||||||| || || ||||||||| | |||||||||| |||||||    
T  26256159 ttaattgtagttaatagagtagttaagttggatgaaagtcaataaagaagaatataatagtggaaagaattaataaatgatacattggtattataaagtg 26256258  T
Q  317 agaattattttgag 330  Q
      ||||||||||||    
T  26256259 gcaattattttgag 26256272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 180 - 261
Target Start/End: Original strand, 32219695 - 32219776
Alignment:
Q  180 aatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataa 261  Q
    ||||||||||||| || |||||| ||||| || |||||||||| ||||| ||||||| |||||||||  |||||||||||||    
T  32219695 aatggtaaaattaatatcatttattaaaatactcttattaattatagtttgtggagtggttaagttggatgaaattcaataa 32219776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 127 - 195
Target Start/End: Original strand, 35367625 - 35367694
Alignment:
Q  127 tcgtttaag-gtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagta 195  Q
    ||||||||| |||| |||| |||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  35367625 tcgtttaagcgtttatgcacgattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 35367694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 303
Target Start/End: Complemental strand, 31154236 - 31154091
Alignment:
Q  156 aaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaatt 255  Q
    ||||||||||||||||||||||| |||| |||||||||||  || |||||||   || ||||||||||||||| || ||||  |||||||   |||||||    
T  31154236 aaaatgattaattgtgttgattttaatgataaaattagtattatctactaaattgcatttattaattgtagttggtagagtgcttaagtttgatgaaatt 31154137  T
Q  256 caataagtaagggtgtaatagtgggaaaaaataataaatgctgcattg 303  Q
    || ||| |||| || || || |  ||||||||||| |||| |||||||    
T  31154136 cagtaaataagtgtatagtatt--gaaaaaataattaatgttgcattg 31154091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 305
Target Start/End: Original strand, 13365964 - 13366107
Alignment:
Q  159 atgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaa 258  Q
    ||||||| ||||||||||||||||| | |||   ||  |||||||||||| || ||||||||| |||||||||||||||| || ||    | | || |||    
T  13365964 atgattagttgtgttgatttcaatgatgaaag--gtttcatttactaaaatacccttattaatagtagttagtggagtagctaggtgagttcagatacaa 13366061  T
Q  259 taagtaagggtgtaatagtgggaaaaaataataaatgctgcattggt 305  Q
    ||  ||||||| || |||| |||||||||||||||||||||||||||    
T  13366062 tagataagggtatattagt-ggaaaaaataataaatgctgcattggt 13366107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 208
Target Start/End: Original strand, 6267837 - 6267918
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaa 208  Q
    ||||||||||||||||||  ||| |||   |||||||||||||||||||||| |||| ||||| ||||| ||| ||||||||    
T  6267837 tcgtttaaggtttgtgcactatttttaaagaaatgattaattgtgttgattttaatgataaaactagtatcatgtactaaaa 6267918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 44426745 - 44426836
Alignment:
Q  156 aaaatgattaattgtgttgatttcaatggtaaaattagtag---catttactaaaacacacttattaattgtagttagtggagtagttaagt 244  Q
    ||||| |||| ||| ||||||||||||||||||||| ||||   ||||||||||||||   |||||||||||| ||||||||| | ||||||    
T  44426745 aaaataattagttgagttgatttcaatggtaaaatttgtagtatcatttactaaaacatctttattaattgtaattagtggagcaattaagt 44426836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 157 - 245
Target Start/End: Complemental strand, 6365738 - 6365650
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagtt 245  Q
    ||||||||||||||||||||||||||  | |||||||||  ||||| ||||| |   || |||||||||||||||| | ||||||||||    
T  6365738 aaatgattaattgtgttgatttcaataatcaaattagtattatttattaaaatatcattgttaattgtagttagtgaattagttaagtt 6365650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 29778425 - 29778481
Alignment:
Q  175 atttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagt 231  Q
    ||||||||||||||||||||| |||||||||||| |   ||||||||||||||||||    
T  29778425 atttcaatggtaaaattagtatcatttactaaaatatcattattaattgtagttagt 29778481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 131 - 235
Target Start/End: Complemental strand, 41080731 - 41080627
Alignment:
Q  131 ttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttag 230  Q
    ||||||||| ||||||| | |||  ||||||||||||||||||||||| ||| ||||||||  || |||||| | ||| |   |||||||||||| ||||    
T  41080731 ttaaggtttatgcatgaattttaaaaaaatgattaattgtgttgattttaatagtaaaatttatatcatttattgaaatatctttattaattgtaattag 41080632  T
Q  231 tggag 235  Q
    |||||    
T  41080631 tggag 41080627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 11642286 - 11642196
Alignment:
Q  143 catgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtag 238  Q
    |||| |||||| |||||||||||||  ||||||||| |||||||||||       ||||||||||||||| ||||||||| |||||||| ||||||    
T  11642286 catggttattaagaaaatgattaatattgttgattttaatggtaaaatat-----atttactaaaacacatttattaattatagttagtagagtag 11642196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 276
Target Start/End: Original strand, 26257951 - 26258070
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattc 256  Q
    |||||||||||||| ||||||||||| | ||||| | || |||||||||||| ||  |||||||| || |||||| || || ||||||||  |||||  |    
T  26257951 aaatgattaattgtattgatttcaatagcaaaatgattatcatttactaaaatacctttattaatcgtggttagtagaataattaagttggatgaaaacc 26258050  T
Q  257 aataagtaagggtgtaatag 276  Q
    | ||| ||||||| ||||||    
T  26258051 agtaaataagggtataatag 26258070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 43614504 - 43614453
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaa 208  Q
    |||||||||| ||||||||||| |||||||||||||||| |||| |||||||    
T  43614504 aaatgattaagtgtgttgattttaatggtaaaattagtatcattgactaaaa 43614453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 173
Target Start/End: Original strand, 26252500 - 26252558
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgtt 173  Q
    |||||||| || |||||||| |||| |||||||||||||  ||||||||||||||||||    
T  26252500 tcacaatagtagtcgtttaaagtttttgcatgattattaaaaaaatgattaattgtgtt 26252558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 229
Target Start/End: Complemental strand, 35538752 - 35538678
Alignment:
Q  155 gaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtta 229  Q
    |||||| |||||||||||||||||||||| ||||||   ||  ||||||||||| |  |||||||||||||||||    
T  35538752 gaaaattattaattgtgttgatttcaatgataaaatggatattatttactaaaatatccttattaattgtagtta 35538678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 235
Target Start/End: Original strand, 978866 - 978946
Alignment:
Q  155 gaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggag 235  Q
    ||||||||||| ||||||||||||||||| ||||||  ||  |||||| | ||| |  ||||||||| |||||||||||||    
T  978866 gaaaatgattagttgtgttgatttcaatgataaaatgtgtttcatttaatgaaatatccttattaatagtagttagtggag 978946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 12151167 - 12151123
Alignment:
Q  285 aataataaatgctgcattggtattgtaaagtgagaattattttga 329  Q
    ||||||||||||||||||| |||| |||||||| |||||||||||    
T  12151167 aataataaatgctgcattgatattataaagtgacaattattttga 12151123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 266
Target Start/End: Complemental strand, 15057531 - 15057428
Alignment:
Q  162 attaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataa 261  Q
    |||||||  |||||||| ||| |||||||||||| ||| || |||||||   ||||||||| |||||| ||||||||||||||  | | ||| |||||||    
T  15057531 attaattaagttgattttaatagtaaaattagtatcatatattaaaacatttttattaattatagtta-tggagtagttaagtgaagtaaaaatcaataa 15057433  T
Q  262 gtaag 266  Q
    |||||    
T  15057432 gtaag 15057428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 15904802 - 15904754
Alignment:
Q  213 cttattaattgtagttagtggagtagttaagttgactgaaattcaataa 261  Q
    |||||||||||||||||||| |||||||||||  | |||||||||||||    
T  15904802 cttattaattgtagttagtgaagtagttaagtgaagtgaaattcaataa 15904754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 330
Target Start/End: Complemental strand, 37177886 - 37177770
Alignment:
Q  214 ttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaa 313  Q
    |||||||| |||||||||  |||||||||||||  | ||||| ||||| |||| || ||||||||  ||| |||||||| || | |||||  ||| ||||    
T  37177886 ttattaatggtagttagtatagtagttaagttggataaaattaaataaataagagtataatagtgaaaaataataataagtgttacattgacattctaaa 37177787  T
Q  314 gtgagaattattttgag 330  Q
     ||| ||||||||||||    
T  37177786 atgacaattattttgag 37177770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 49177024 - 49176940
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagtta 241  Q
    |||| ||||||  |||||||||||| ||||||||  ||  |||||||||||| || |||||||||| |||||| | |||||||||    
T  49177024 aaataattaataatgttgatttcaaaggtaaaatatgtgtcatttactaaaatactcttattaattatagttaatagagtagtta 49176940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 229
Target Start/End: Original strand, 51028508 - 51028576
Alignment:
Q  161 gattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtta 229  Q
    |||||||||||||||||| |||  |||| ||||||||||||| ||||| |   ||||||||||||||||    
T  51028508 gattaattgtgttgattttaataataaagttagtagcatttattaaaatatttttattaattgtagtta 51028576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 7439896 - 7439963
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagt 194  Q
    ||||||||||||| |||| |||| |||  |||||||||||  ||||  ||||||||||||||||||||    
T  7439896 tcgtttaaggtttttgcacgatttttagaaaaatgattaaccgtgtcaatttcaatggtaaaattagt 7439963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 44122322 - 44122248
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcat--ttactaaaacacacttattaattgtagtta 229  Q
    ||||||||||| |||||||||| ||||| |||||  ||| |||  |||||||||||| |||||||||| ||||||    
T  44122322 aaatgattaatagtgttgattttaatggaaaaatatgtatcatatttactaaaacacccttattaattatagtta 44122248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 348 - 378
Target Start/End: Original strand, 26252662 - 26252692
Alignment:
Q  348 aagagacaataattgtgagacggagggagta 378  Q
    |||||||||||||||||||||||||||||||    
T  26252662 aagagacaataattgtgagacggagggagta 26252692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 346 - 379
Target Start/End: Complemental strand, 9307544 - 9307511
Alignment:
Q  346 taaagagacaataattgtgagacggagggagtat 379  Q
    ||||||||||||||| ||||||||||||||||||    
T  9307544 taaagagacaataatcgtgagacggagggagtat 9307511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 15444483 - 15444543
Alignment:
Q  148 ttattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaa 208  Q
    |||||| | ||||||||||| |||||||||| |||||||||||  |||  |||||||||||    
T  15444483 ttattaaggaaatgattaatagtgttgattttaatggtaaaatatgtattatttactaaaa 15444543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 330
Target Start/End: Complemental strand, 15699114 - 15699074
Alignment:
Q  290 taaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    |||||||||||||| |||| |||||||| ||||||||||||    
T  15699114 taaatgctgcattgatattctaaagtgacaattattttgag 15699074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 329
Target Start/End: Complemental strand, 39887885 - 39887769
Alignment:
Q  214 ttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtg-ggaaaaaataataaatgctgcattggtattgtaa 312  Q
    |||||||| ||||||||| ||||| |||||||   ||||||||||||| |||  || ||| |||| | ||||||||| ||||  |||| |  |||| |||    
T  39887885 ttattaatagtagttagttgagtaattaagtttgatgaaattcaataaataaatgtataacagtgagaaaaaaataacaaatattgcactaatattttaa 39887786  T
Q  313 agtgagaattattttga 329  Q
    ||||| |||||||||||    
T  39887785 agtgacaattattttga 39887769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 325
Target Start/End: Original strand, 51028608 - 51028652
Alignment:
Q  281 aaaaaataataaatgctgcattggtattgtaaagtgagaattatt 325  Q
    ||||||||||||||| ||||||| ||||||||||||  |||||||    
T  51028608 aaaaaataataaatgttgcattgatattgtaaagtgttaattatt 51028652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 146; Significance: 8e-77; HSPs: 80)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 115 - 371
Target Start/End: Complemental strand, 39482764 - 39482505
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| ||||||||| |||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||    
T  39482764 tcacaatattagtcgtttaagatttgtgcacgattattaagaaaatgattaattgtgttgatttcaagggtaaaattagtagaatttactaaaacaccct 39482665  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggt---gtaatagtgggaaaaaataataaatgctgcattggtattgta 311  Q
    |||||||| ||||||||||| ||||||||| || ||||||||||||| |||||||    |||||||||||||||||||||||| ||||||||||||||||    
T  39482664 tattaattatagttagtggactagttaagtggaatgaaattcaataaataagggtataataatagtgggaaaaaataataaatactgcattggtattgta 39482565  T
Q  312 aagtgagaattattttgagnnnnnnnnnnnntgctaaagagacaataattgtgagacgga 371  Q
    |||||| ||||||||||||            ||||||||||||||||||| |||||||||    
T  39482564 aagtgacaattattttgagaaaaataaaaattgctaaagagacaataattttgagacgga 39482505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 157 - 378
Target Start/End: Original strand, 44761503 - 44761722
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattc 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||    
T  44761503 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacccttattaattgtagttagtggagtagttaagttggatgaaattc 44761602  T
Q  257 aataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgagnnnnnnnnnnnntgctaaagagacaa 356  Q
    ||||| | ||||| ||||||||| ||||| ||||  ||||||||||||||||||||||||| ||||||||||||            ||||| ||||||||    
T  44761603 aataaatgagggtataatagtggaaaaaactaat--atgctgcattggtattgtaaagtgacaattattttgagaaaaagaaaaaatgctagagagacaa 44761700  T
Q  357 taattgtgagacggagggagta 378  Q
    ||||||||||||||||||||||    
T  44761701 taattgtgagacggagggagta 44761722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 109 - 379
Target Start/End: Original strand, 9300074 - 9300344
Alignment:
Q  109 tccatttcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaa 208  Q
    ||||| ||||||||||  | ||||||||||| |||| |||||||| ||||||||||  |||||||||||| ||||||||||||| |||||||||||||||    
T  9300074 tccatctcacaatattgattgtttaaggtttatgcacgattattaagaaaatgattgtttgtgttgattttaatggtaaaattaatagcatttactaaaa 9300173  T
Q  209 cacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaa--aataataaatgctgcattggta 306  Q
    ||| |||||||||| |||||||||||||||||||||||| ||||||||||||| ||||| | |||||||||| |||  |||||||||| |||||||||||    
T  9300174 cacccttattaattttagttagtggagtagttaagttgaatgaaattcaataaataaggatataatagtggggaaagaaataataaatactgcattggta 9300273  T
Q  307 ttgtaaagtgagaattattttgagnnnnnnnnnnnntgctaaagagacaataattgtgagacggagggagtat 379  Q
    ||||||||||| ||||||||||||            |||||||||| |||||||||||||||||| |||||||    
T  9300274 ttgtaaagtgacaattattttgagaaaaagaaat--tgctaaagaggcaataattgtgagacggatggagtat 9300344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 127 - 368
Target Start/End: Original strand, 21216080 - 21216320
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  21216080 tcgtttaaggtttgtgcatgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagttgcatttactaaaacatccttattaattgtag 21216179  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaat-aataaatgctgcattggtattgtaaagtgagaattatt 325  Q
    ||||||||||||||||||||  |||||||||||||  || ||| ||||||| | ||||||| |||||||| ||||||||||||||||||||| |||||||    
T  21216180 ttagtggagtagttaagttggatgaaattcaataa--aatggtataatagtagaaaaaaataaataaatgttgcattggtattgtaaagtgacaattatt 21216277  T
Q  326 ttgagnnnnnnnnnnnntgctaaagagacaataattgtgagac 368  Q
    || ||            ||||||||||||||||||||||||||    
T  21216278 ttcagaaaaagaaaaaatgctaaagagacaataattgtgagac 21216320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 119 - 327
Target Start/End: Original strand, 11976907 - 11977115
Alignment:
Q  119 aatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttatt 218  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||| ||||||||||||||||| || ||||||    
T  11976907 aatattagtcgtttaaggtttgtgcatgattattatggaaatcattaattgtgttgatttcaatggtataatcagtagcatttactaaaatacccttatt 11977006  T
Q  219 aattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgag 318  Q
    ||||||||||||| |||||||||||||   ||||||||||||| ||| ||| |||||| || ||||||||||||||||| |||| |||||||||| |||     
T  11977007 aattgtagttagtagagtagttaagttagatgaaattcaataaataaaggtataatagcggaaaaaaataataaatgctacattagtattgtaaaatgac 11977106  T
Q  319 aattatttt 327  Q
    |||||||||    
T  11977107 aattatttt 11977115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 105 - 329
Target Start/End: Original strand, 45425623 - 45425848
Alignment:
Q  105 tccttccatttcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttact 204  Q
    ||||||| | ||| ||||||| ||||||||| ||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||| || |||||| |    
T  45425623 tccttccgtctcataatattagtcgtttaagttttatgcatgattattaagaaaatgattaattgtgttgattttaatggtaaaattaataacatttatt 45425722  T
Q  205 aaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgg-gaaaaaataataaatgctgcattg 303  Q
    ||||||  ||||||||||||||||||||||||| ||||||||  ||||||||||||| ||||||| |||||||||  ||||||||||||||| | |||||    
T  45425723 aaaacattcttattaattgtagttagtggagtaattaagttgtatgaaattcaataaataagggtataatagtggaaaaaaaataataaatgttacattg 45425822  T
Q  304 gtattgtaaagtgagaattattttga 329  Q
     ||||||||||||| |||||||||||    
T  45425823 atattgtaaagtgacaattattttga 45425848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 127 - 327
Target Start/End: Original strand, 10179926 - 10180126
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||||||||||||| |||||||| |||||||| || |||| ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||    
T  10179926 tcgtttaaggtttgtgcacgattattaagaaaatgagtagttgtattgatttcaatggtaaaattagtataatttactaaaatacacttattaattgtag 10180025  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||||||||||||||||||||| ||||||||||| | |||| || ||||| | | ||| ||||||||||| |||||||||||| |||||||| ||||||||    
T  10180026 ttagtggagtagttaagttgaatgaaattcaattaataagtgtataataatagaaaataataataaatgttgcattggtattctaaagtgacaattattt 10180125  T
Q  327 t 327  Q
    |    
T  10180126 t 10180126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 115 - 329
Target Start/End: Complemental strand, 39405911 - 39405697
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| |||||||||||||||||| |||||||| | ||||||||||||||||| ||||||||| ||||||||||| ||||||||| || |   |    
T  39405911 tcacaatattagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttaatttcaatgataaaattagtatcatttactataatatctt 39405812  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaag 314  Q
    ||||||||  ||||||||||||| ||||||||| ||||||| ||||| ||||||| ||||||||  ||| ||||||||||||||||||| |||| |||||    
T  39405811 tattaattacagttagtggagtaattaagttgaatgaaattaaataaataagggtataatagtgaaaaataataataaatgctgcattgatattctaaag 39405712  T
Q  315 tgagaattattttga 329  Q
    ||| |||||||||||    
T  39405711 tgacaattattttga 39405697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 129 - 298
Target Start/End: Complemental strand, 7173049 - 7172880
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    |||||||||||||| || |||||||   ||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||    
T  7173049 gtttaaggtttgtgtatcattattaaagaaatgattaattgtgttgatttcaatgataaaattagtagcatttactaaaacatatttattaattgtagtt 7172950  T
Q  229 agtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctg 298  Q
    | || |||||||||||||| ||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  7172949 aatgaagtagttaagttgaatgaaattcaataaataagggtataatagtggaaaaaaataataaatgctg 7172880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 13335353 - 13335151
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||| |||| |||||||| | ||||| ||||||||||||||||  ||||||||||||||| |||||| ||||||||| |||||||||| ||    
T  13335353 tcgtttaaggtttatgcacgattattaaggaaatggttaattgtgttgattttgatggtaaaattagtatcatttagtaaaacacatttattaattgcag 13335254  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||||| |||||||||||||   ||||||||||||| | ||||| ||||| | ||||||||||||||||| |||||||||||| |||||||| ||||||||    
T  13335253 ttagtagagtagttaagtttgatgaaattcaataaatcagggtataataat-ggaaaaaataataaatgttgcattggtattctaaagtgacaattattt 13335155  T
Q  327 tgag 330  Q
    ||||    
T  13335154 tgag 13335151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 127 - 330
Target Start/End: Original strand, 26626091 - 26626294
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||| |||| |||||||| | ||||||||||||||||||| ||  ||||||||||| |||  ||||| ||||| |  ||||||||||||||    
T  26626091 tcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgaatttgatggtaaaatttgtataatttattaaaatatccttattaattgtag 26626190  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    |||||||||||||   ||||| ||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||| |||| |||||||| ||||||||    
T  26626191 ttagtggagtagtccggttgaatgaaattcaataaataagggtataataatgggaaaaaataataaatgctgcattgatattttaaagtgacaattattt 26626290  T
Q  327 tgag 330  Q
    ||||    
T  26626291 tgag 26626294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 127 - 326
Target Start/End: Original strand, 17719237 - 17719436
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||| |||||||| ||||||||  |||||||||||||||  |||||| ||||||||| ||||||  ||||||||||| |  |||||||||| |||    
T  17719237 tcgtttaagatttgtgcacgattattaaaaaaatgattaattgtaatgattttaatggtaaagttagtattatttactaaaatatccttattaattatag 17719336  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||||||||||||||||||||  ||||||| ||||| ||| ||| ||||| ||| |||| |||||||||| |||||||||||| |||||||| ||||||||    
T  17719337 ttagtggagtagttaagttggatgaaatttaataaataaaggtataataatggaaaaagataataaatgttgcattggtattctaaagtgacaattattt 17719436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 32476424 - 32476222
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||||||||||||| | |||||| |||||||||| ||| |||||||||||||| |||||||| || |||||| ||||| || ||||||||||||||    
T  32476424 tcgtttaaggtttgtgcacggttattaagaaaatgattgattctgttgatttcaatgataaaattaatatcatttattaaaatacccttattaattgtag 32476325  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||| || ||||||||||||   ||||||||||||| ||||||| ||| | | | ||||||||||| | |||||||||||||| |||||||| ||||||||    
T  32476324 ttaatgaagtagttaagtttgatgaaattcaataaataagggtataacaat-gaaaaaaataatatacgctgcattggtattctaaagtgacaattattt 32476226  T
Q  327 tgag 330  Q
    ||||    
T  32476225 tgag 32476222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 120 - 241
Target Start/End: Original strand, 1875564 - 1875685
Alignment:
Q  120 atattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttatta 219  Q
    |||||| |||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1875564 atattagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacccttatta 1875663  T
Q  220 attgtagttagtggagtagtta 241  Q
    ||||||||||||| | ||||||    
T  1875664 attgtagttagtgaaatagtta 1875685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 127 - 330
Target Start/End: Original strand, 10097970 - 10098174
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||  |||||| |||||| |||||||||||||||| |||||||  |||||||||||| || ||||||||| ||||| ||||||||||||||    
T  10097970 tcgtttaaggttgatgcatggttattaagaaaatgattaattgtattgattttgatggtaaaattaatatcatttactataacacccttattaattgtag 10098069  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgg-gaaaaaataataaatgctgcattggtattgtaaagtgagaattatt 325  Q
    ||||||||||||||||||||  |||| |||||||| ||| | | | ||| |||  ||||||||||||||| || ||||||||| |||||| | |||||||    
T  10098070 ttagtggagtagttaagttggatgaagttcaataaataaagatattataatggaaaaaaaataataaatgatgtattggtattctaaagtaacaattatt 10098169  T
Q  326 ttgag 330  Q
    |||||    
T  10098170 ttgag 10098174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 127 - 330
Target Start/End: Original strand, 34948666 - 34948867
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||| ||||| ||  ||||||| | |||||||||||||||||||||| ||| |||||||||||| |||||||  ||||||| |||||||||||||    
T  34948666 tcgtttaagatttgtacacaattattaaggaaatgattaattgtgttgatttaaatagtaaaattagtatcatttacagaaacacatttattaattgtag 34948765  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||||||||||||||||||||  ||||||||||||| ||| ||| ||| | | | ||||||||||||||  |||||||||||| |||||| | ||||||||    
T  34948766 ttagtggagtagttaagttggatgaaattcaataaataa-ggtataacaat-gaaaaaaataataaatattgcattggtattctaaagtaacaattattt 34948863  T
Q  327 tgag 330  Q
    ||||    
T  34948864 tgag 34948867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 130 - 327
Target Start/End: Original strand, 14854916 - 14855115
Alignment:
Q  130 tttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtta 229  Q
    |||||||||||| || |||||| | |||||||| | ||||||||||||| ||||||||||||| | |||||| |||||||||  ||||||||||||||||    
T  14854916 tttaaggtttgtacacgattatcaagaaaatgaatcattgtgttgattttaatggtaaaattaattgcatttgctaaaacacctttattaattgtagtta 14855015  T
Q  230 gtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgg--gaaaaaataataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
    |||||||||||| | ||| |||||||||||||  || ||| |||||||||   ||||||||||||||  ||||||  ||||||||||||| |||||||||    
T  14855016 gtggagtagttaggctgaatgaaattcaataaagaatggtataatagtggaaaaaaaaataataaatattgcattaatattgtaaagtgacaattatttt 14855115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 127 - 330
Target Start/End: Original strand, 22771814 - 22772017
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||| ||||   |||||| | || |||||||||| ||||||||  ||||||||||||||  |||||| |||||||| ||||||||||||||    
T  22771814 tcgtttaaggtttatgcacagttattaaggaattgattaattgggttgattttgatggtaaaattagtgtcatttattaaaacacccttattaattgtag 22771913  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    |||||| |||| ||| ||||  ||||||||||||| ||||||| ||||| ||  ||  ||||||||||| |||||||||||| |||||||| ||||||||    
T  22771914 ttagtgaagtaattatgttggatgaaattcaataaataagggtataataatgaaaagtaataataaatgttgcattggtattctaaagtgacaattattt 22772013  T
Q  327 tgag 330  Q
    ||||    
T  22772014 tgag 22772017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 148 - 327
Target Start/End: Complemental strand, 31231846 - 31231667
Alignment:
Q  148 ttattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttga 247  Q
    |||||| | ||||||| |||||||| |||||  |||||||||||| || |||||||| |||||| ||||||||||||||||||||||||||||||||||     
T  31231846 ttattaaggaaatgatgaattgtgtcgattttgatggtaaaattaatatcatttactgaaacacccttattaattgtagttagtggagtagttaagttgg 31231747  T
Q  248 ctgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
     | || |||||||| ||||||| | ||| ||| ||||||||||||||| |||||||||||| |||| ||| |||||||||    
T  31231746 ataaagttcaataaataagggtattataatggaaaaaaataataaatgatgcattggtattataaaatgacaattatttt 31231667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 157 - 330
Target Start/End: Original strand, 5053162 - 5053334
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattc 256  Q
    ||||||||||||||||||||||  |||||||||||| || ||||||||||||||  |||||||||||||||||| ||||||||||| |||  ||| ||||    
T  5053162 aaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacagtcttattaattgtagttagcggagtagttaaattggatgagattc 5053261  T
Q  257 aataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    ||||| |||| || ||||| |||| ||||| |||||||| ||||||| |||| |||||||| ||||||||||||    
T  5053262 aataaataagagtataataatggggaaaaa-aataaatgttgcattgatattttaaagtgacaattattttgag 5053334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 127 - 313
Target Start/End: Complemental strand, 31271158 - 31270974
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||||||||||| | |||||||| |||||||||| ||||||||||||| ||||||||||||| || ||| |||||||| || |||||||||| |||    
T  31271158 tcgtttaaggtttgtgtacgattattaagaaaatgattgattgtgttgattttaatggtaaaattaatatcatatactaaaatactcttattaattatag 31271059  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaa 313  Q
    ||||||||||||||||||||  | ||||||||||| ||||||| || || |   ||||||||||||||  |||||| ||||| ||||    
T  31271058 ttagtggagtagttaagttggataaaattcaataaataagggtatagtaat--aaaaaaataataaatattgcattagtattctaaa 31270974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 127 - 330
Target Start/End: Original strand, 4428331 - 4428531
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||| || || ||| ||| ||||||||||| |||||||||||| |||| |||||||| || |||||||||||| ||| |||||||||||||    
T  4428331 tcgtttaaggtttatgtat-atttttaagaaaatgattatttgtgttgattttaatgataaaattattatcatttactaaaatacaattattaattgtag 4428429  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    |||||| | ||||||||||   ||||||||||||| |||  || |||||||||  ||||||||||| || | ||||| |||| |||||||| ||||||||    
T  4428430 ttagtgaattagttaagttagatgaaattcaataaataaaagtataatagtgg--aaaaataataattgttacattgatattctaaagtgacaattattt 4428527  T
Q  327 tgag 330  Q
    ||||    
T  4428528 tgag 4428531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 115 - 275
Target Start/End: Complemental strand, 31082768 - 31082608
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| | ||||| |||||||||| ||| |||| | |||||||||||||| ||||||| |||| |||||||||| | |||||||||||||| ||    
T  31082768 tcacaatattagttgtttatggtttgtgcacgataattaaggaaatgattaattgtcttgattttaatgataaaattagtggtatttactaaaacaccct 31082669  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaata 275  Q
    |||||||| |||||||||||||||||||||||  ||||||| ||||| ||| ||| |||||    
T  31082668 tattaattatagttagtggagtagttaagttggatgaaatttaataaataaaggtataata 31082608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 130 - 261
Target Start/End: Original strand, 42972490 - 42972624
Alignment:
Q  130 tttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtta 229  Q
    ||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||| || | |||||||||| || |||||||||| ||||||    
T  42972490 tttaaggtttgtgcacgattattaagaaaatgattaattgttttgatttcaatggtaaaattaatatcgtttactaaaatacccttattaattatagtta 42972589  T
Q  230 gtgga---gtagttaagttgactgaaattcaataa 261  Q
    |||||   ||||||||||||| |||||||||||||    
T  42972590 gtggagacgtagttaagttgaatgaaattcaataa 42972624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 127 - 330
Target Start/End: Original strand, 40996344 - 40996543
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||| ||||  ||| ||| | ||||||||||||||||||||||  |  |||||||||||  ||||||||||||||| ||||||||||||||    
T  40996344 tcgtttaaggtttatgcacaattgttaaggaaatgattaattgtgttgattttgaatgtaaaattagtttcatttactaaaacacccttattaattgtag 40996443  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    |||||| | | |||||||||  ||||||||||||| |||||| ||| || ||   ||||| ||| |||| |||||||||||| |||||||| ||||||||    
T  40996444 ttagtgaaatggttaagttggatgaaattcaataaataaggg-gtactaatg---aaaaaaaatgaatgttgcattggtattctaaagtgacaattattt 40996539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 148 - 327
Target Start/End: Original strand, 396611 - 396790
Alignment:
Q  148 ttattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttga 247  Q
    |||||| | |||||||||||| |||||||||||| ||||||||||||| ||||||||| || |  ||||||||||||||||| || ||||||||  |||     
T  396611 ttattaaggaaatgattaattatgttgatttcaacggtaaaattagtatcatttactacaatatccttattaattgtagttaatgaagtagttatattgg 396710  T
Q  248 ctgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
     | ||||||||| | ||||||| ||||| ||  ||| ||||||||||| |||||||||||| |||||||| |||||||||    
T  396711 ataaaattcaattaataagggtataataatgaaaaataataataaatgttgcattggtattctaaagtgacaattatttt 396790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 51247 - 51132
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||| ||| ||||||| |||| ||||||| |||||||| |||||||||||||||    
T  51247 gtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgattttaat-gtaaaataagtatcatttacaaaaacacatttattaattgtagtt 51149  T
Q  229 agtggagtagttaagtt 245  Q
    |||||| || |||||||    
T  51148 agtggattaattaagtt 51132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 198 - 329
Target Start/End: Original strand, 29226578 - 29226708
Alignment:
Q  198 atttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgct 297  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||   ||||||||||||| |||||||  |||| | | |||| ||||||||||||    
T  29226578 atttattaaaacactcttattaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtacaataat-gaaaaatataataaatgct 29226676  T
Q  298 gcattggtattgtaaagtgagaattattttga 329  Q
    |||||| |||| |||||||| |||||||||||    
T  29226677 gcattgatattttaaagtgacaattattttga 29226708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 17824057 - 17823856
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||||||||||| || ||| ||| | ||| | ||||| ||||||||||||||| ||||||||||| | ||||||| || ||  |||||||||||||    
T  17824057 tcgtttaaggtttgtgtattatttttaaggaaaag-ttaatcgtgttgatttcaatgataaaattagtatcttttactagaatacctttattaattgtag 17823959  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    |||||| |||||||||||||  ||||||| ||||| |||  || ||||||| |||  |||||||||||  || |||| |||| |||| ||| ||||||||    
T  17823958 ttagtgaagtagttaagttggatgaaattaaataaataatagtataatagt-ggaggaaataataaatattgtattgttattataaattgacaattattt 17823860  T
Q  327 tgag 330  Q
    ||||    
T  17823859 tgag 17823856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 127 - 327
Target Start/End: Original strand, 34393933 - 34394137
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||| |||  |||| | |||||| | ||||||||||||||||||||||  |||||||||||||||  ||||||||||||||  ||||||||| |||    
T  34393933 tcgtttaaagttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtataatttactaaaacacctttattaattatag 34394032  T
Q  227 t----tagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaatt 322  Q
    |    |||||||||||||||||||  | || |||||||| |||| || |  || ||| ||||  ||||||||  |||||||||||| |||||||| ||||    
T  34394033 ttaactagtggagtagttaagttggataaagttcaataaataagagtattgtaatggaaaaagttaataaattatgcattggtattttaaagtgacaatt 34394132  T
Q  323 atttt 327  Q
    |||||    
T  34394133 atttt 34394137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 161 - 330
Target Start/End: Complemental strand, 41092097 - 41091931
Alignment:
Q  161 gattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaata 260  Q
    |||||||||||||||||||||||||||||||| || |||||| ||||| || ||||||||||||||||||   | || ||||||| | || |||||||||    
T  41092097 gattaattgtgttgatttcaatggtaaaattaatatcatttattaaaatactcttattaattgtagttagaaaaatatttaagttta-tgtaattcaata 41091999  T
Q  261 agtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    | ||||||| |||||||  ||||||  |||||||||||||||| |||| |||| ||  |||||| |||||    
T  41091998 aataagggtataatagt--gaaaaataaataaatgctgcattgatattctaaattggcaattatgttgag 41091931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 160 - 266
Target Start/End: Complemental strand, 42887104 - 42886998
Alignment:
Q  160 tgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaat 259  Q
    ||||||||||||||||||||||| | |||||||||| |||||||||||| ||  |||||||||||||||||||| ||||||||||||  | |||||||||    
T  42887104 tgattaattgtgttgatttcaatagcaaaattagtatcatttactaaaatacctttattaattgtagttagtggcgtagttaagttggataaaattcaat 42887005  T
Q  260 aagtaag 266  Q
    || ||||    
T  42887004 aaataag 42886998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 148 - 326
Target Start/End: Original strand, 2767291 - 2767475
Alignment:
Q  148 ttattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtg------gagtagtta 241  Q
    |||||| | |||| |||||||||||||||||  ||||||||||||||| |||||| |||||||  ||||||| ||||||||||||      |||||||||    
T  2767291 ttattaaggaaataattaattgtgttgattttgatggtaaaattagtatcatttattaaaacatccttattatttgtagttagtggaggatgagtagtta 2767390  T
Q  242 agttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    |||||  | || |||||||| ||||||| | ||| ||| ||||| ||||||||| || ||| ||||| |||||||| ||||||||    
T  2767391 agttggattaagttcaataaataagggtattatattggaaaaaagtaataaatgttgtattagtattctaaagtgacaattattt 2767475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 196 - 330
Target Start/End: Original strand, 10953786 - 10953914
Alignment:
Q  196 gcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatg 295  Q
    |||||||||||||||| ||||||||||||   ||||||||||||||||||   | ||||||||||  ||||||| ||||| ||   ||||||||||||||    
T  10953786 gcatttactaaaacacccttattaattgt---tagtggagtagttaagttagatcaaattcaatatataagggtataataatg---aaaaataataaatg 10953879  T
Q  296 ctgcattggtattgtaaagtgagaattattttgag 330  Q
     ||||||||||| ||||||||| ||||||||||||    
T  10953880 ttgcattggtatcgtaaagtgacaattattttgag 10953914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 196 - 330
Target Start/End: Original strand, 10961791 - 10961919
Alignment:
Q  196 gcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatg 295  Q
    |||||||||||||||| ||||||||||||   ||||||||||||||||||   | ||||||||||  ||||||| ||||| ||   ||||||||||||||    
T  10961791 gcatttactaaaacacccttattaattgt---tagtggagtagttaagttagatcaaattcaatatataagggtataataatg---aaaaataataaatg 10961884  T
Q  296 ctgcattggtattgtaaagtgagaattattttgag 330  Q
     ||||||||||| ||||||||| ||||||||||||    
T  10961885 ttgcattggtatcgtaaagtgacaattattttgag 10961919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 127 - 222
Target Start/End: Original strand, 7703135 - 7703230
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaatt 222  Q
    |||||||| ||||||| | |||||||| | |||| ||||||||||||||||||||||||||||||| || |||||||||||| || ||||||||||    
T  7703135 tcgtttaaagtttgtgtaagattattaaggaaataattaattgtgttgatttcaatggtaaaattaatatcatttactaaaatacccttattaatt 7703230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 131 - 261
Target Start/End: Original strand, 27294042 - 27294172
Alignment:
Q  131 ttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttag 230  Q
    |||||||||||||| |||| |||   || | |||||||||||| |||| |||| ||||||||||| | |||||||||| | | |||||||||| ||||||    
T  27294042 ttaaggtttgtgcacgatttttaaagaagttattaattgtgttcatttgaatgataaaattagtatcttttactaaaatatatttattaattgcagttag 27294141  T
Q  231 tggagtagttaagttgactgaaattcaataa 261  Q
    ||||||| ||||||||  |||||||||||||    
T  27294142 tggagtaattaagttggatgaaattcaataa 27294172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 44648540 - 44648621
Alignment:
Q  156 aaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagta 237  Q
    |||||||||| ||  ||||||||||||||||||||||||| |||||||||||||| ||||| |||||||| |||||||||||    
T  44648540 aaaatgattagtttagttgatttcaatggtaaaattagtatcatttactaaaacatacttactaattgtaattagtggagta 44648621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 1739789 - 1739709
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagta 195  Q
    ||||||||||| |||| ||||||||||| | |||||||| | |||| ||||||||||||||||||||||||||||||||||    
T  1739789 tcacaatattagtcgtctaaggtttgtgtacgattattaaggaaataattaattgtgttgatttcaatggtaaaattagta 1739709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 36967498 - 36967414
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacac 211  Q
    ||||||||||||| |||| |||||||| | ||||||||||||||||||||||  |||||||||||| || |||||||||||||||    
T  36967498 tcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacac 36967414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 127 - 330
Target Start/End: Original strand, 39300920 - 39301138
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact------------ 214  Q
    ||||||||| |||||| | ||||||||   |||||||||||| |||||||||| |||||||||||| || |||||||||||| || ||                
T  39300920 tcgtttaagatttgtgtacgattattaaagaaatgattaattatgttgatttcgatggtaaaattaatatcatttactaaaaaaccctaattaattgtac 39301019  T
Q  215 ---tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgta 311  Q
       |||||||||||||||||| ||||||| |||||| ||||||||||||| |||  || ||||| ||| ||| ||||||||| | | ||||| |||| ||    
T  39301020 ccttattaattgtagttagtgaagtagttcagttgaatgaaattcaataaataaaagtataataatggaaaataataataaacgattcattgatattcta 39301119  T
Q  312 aagtgagaattattttgag 330  Q
    || ||| ||||||||||||    
T  39301120 aaatgacaattattttgag 39301138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 175 - 330
Target Start/End: Original strand, 39466064 - 39466219
Alignment:
Q  175 atttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaag-ttgactgaaattcaataagtaagggtgtaa 273  Q
    |||| |||| ||||||||||| |||||||||||| |   |||||||| || ||||||| |||||||||  |||  | ||||||||||| ||||| | |||    
T  39466064 attttaatgctaaaattagtatcatttactaaaatatctttattaatcgtggttagtgcagtagttaaaattggataaaattcaataaataaggatataa 39466163  T
Q  274 tagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    |||||  ||||||||||||||| || || ||||||||||||||| ||||||||||||    
T  39466164 tagtga-aaaaaataataaatgttgtatcggtattgtaaagtgataattattttgag 39466219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 155 - 309
Target Start/End: Original strand, 4924074 - 4924229
Alignment:
Q  155 gaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaat 254  Q
    |||||| |||| ||||||  |||| ||||||||||||||||  ||||||||||| |   |||||||||||||||| | ||||||||||||||| |||||     
T  4924074 gaaaattattagttgtgtatattttaatggtaaaattagtattatttactaaaatatctttattaattgtagttaatagagtagttaagttgaatgaaac 4924173  T
Q  255 tcaataagtaagggtgtaatagtgggaaaa-aataataaatgctgcattggtattg 309  Q
    | ||||| ||||||| || |||||  |||| ||||||||||  || ||||||||||    
T  4924174 ttaataaataagggtatattagtgaaaaaataataataaataatgtattggtattg 4924229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 156 - 295
Target Start/End: Complemental strand, 40028624 - 40028481
Alignment:
Q  156 aaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattg----tagttagtggagtagttaagttgactga 251  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||| ||||| |   ||||||||||    ||||||||| |||| |||||||   |||    
T  40028624 aaaatgattaattatgttgatttcaatggtaaaattaatagcatttattaaaatatcattattaattgtatttagttagtgaagtaattaagttagatga 40028525  T
Q  252 aattcaataagtaagggtgtaatagtgggaaaaaataataaatg 295  Q
    ||||||||||  |||  | ||||| ||| |||||||||||||||    
T  40028524 aattcaataaacaagaatataatactggaaaaaaataataaatg 40028481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 214 - 329
Target Start/End: Original strand, 6796395 - 6796516
Alignment:
Q  214 ttattaattgtagttagtggagtagttaa----gttgactgaaattcaataagtaagggtgtaatagtgggaaaaa--ataataaatgctgcattggtat 307  Q
    |||||||||||||||||||||||||||||    ||||| | ||||||| ||| ||||||| |||||  || |||||  |||||||||||||||||| |||    
T  6796395 ttattaattgtagttagtggagtagttaattaagttgaataaaattcattaaataagggtataataaaggaaaaaataataataaatgctgcattgctat 6796494  T
Q  308 tgtaaagtgagaattattttga 329  Q
     ||||||||| |||||||||||    
T  6796495 cgtaaagtgacaattattttga 6796516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 330
Target Start/End: Original strand, 36006901 - 36007071
Alignment:
Q  162 attaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataa 261  Q
    |||| |||||||||||| |||| |||||||| ||  ||| ||||||| |  | ||||||||||||||||||| ||| |||||||   |||||||||||||    
T  36006901 attagttgtgttgattttaatgataaaattaatattattgactaaaatatccctattaattgtagttagtggggtaattaagtttgatgaaattcaataa 36007000  T
Q  262 gtaagggtgtaatagtgggaaaa--aataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
     |||| |  ||||||||  ||||  || ||||| || |||||| ||||| |||||||| ||||||||||||    
T  36007001 ataagagcataatagtgaaaaaaataaaaataattgttgcattagtattctaaagtgacaattattttgag 36007071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 192 - 266
Target Start/End: Complemental strand, 32678475 - 32678401
Alignment:
Q  192 agtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaag 266  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||||||||||||  ||||||| ||||| ||||    
T  32678475 agtatcatttactaaaacatccttattaattgtagttagtggagtagttaagttggatgaaattaaataaataag 32678401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 241
Target Start/End: Original strand, 3117029 - 3117111
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagtta 241  Q
    ||||||||||| ||||||||||||||||||||||  ||  ||||||||||||||| ||| |||||| |||||| |||||||||||    
T  3117029 aaatgattaatagtgttgatttcaatggtaaaat--gtgtcatttactaaaacacccttgttaattatagttaatggagtagtta 3117111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 325
Target Start/End: Original strand, 1875840 - 1875916
Alignment:
Q  249 tgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattatt 325  Q
    ||||||| ||||| ||||||| || |||||| ||||| ||||||||| ||||||||||||||||||||| |||||||    
T  1875840 tgaaatttaataaataagggtatactagtggaaaaaagtaataaatgttgcattggtattgtaaagtgacaattatt 1875916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 29226212 - 29226278
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagta 195  Q
    ||||||| ||| ||||| ||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  29226212 gtttaagatttatgcataattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 29226278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 117 - 194
Target Start/End: Complemental strand, 6611844 - 6611767
Alignment:
Q  117 acaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagt 194  Q
    ||||||||| ||||||||| |||   || ||||||||  ||||||||||||| |||||||||||||||||||||||||    
T  6611844 acaatattagtcgtttaagatttacacacgattattaaaaaaatgattaattatgttgatttcaatggtaaaattagt 6611767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 246
Target Start/End: Complemental strand, 31331515 - 31331426
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttg 246  Q
    |||||||||||||| |||||||||||  |||||||| ||  ||||||||||| |   ||||||||||||||||||| |||| ||||||||    
T  31331515 aaatgattaattgtattgatttcaattataaaattattattatttactaaaatatcattattaattgtagttagtgaagtaattaagttg 31331426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 261
Target Start/End: Complemental strand, 5356706 - 5356603
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattc 256  Q
    ||||||||| |||||||||||| |||| |||||||| || ||||||||||   ||  |||||||||||||||| |||| || ||||||||  ||||||||    
T  5356706 aaatgattagttgtgttgattttaatgataaaattaatatcatttactaatgtac-tttattaattgtagttaatggaataattaagttggatgaaattc 5356608  T
Q  257 aataa 261  Q
    |||||    
T  5356607 aataa 5356603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 130 - 262
Target Start/End: Complemental strand, 33765794 - 33765662
Alignment:
Q  130 tttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtta 229  Q
    |||||||||||||||  ||| ||| | |||||||||||| ||||||||| |||  |||||||| || |||||||||| | ||  |||||||||||||||     
T  33765794 tttaaggtttgtgcacaatttttaaggaaatgattaattatgttgattttaatactaaaattactatcatttactaatatacttttattaattgtagttg 33765695  T
Q  230 gtggagtagttaagttgactgaaattcaataag 262  Q
    ||| |  || ||| |||  ||||||||||||||    
T  33765694 gtgaatcagataaattgggtgaaattcaataag 33765662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 328
Target Start/End: Complemental strand, 35732188 - 35732062
Alignment:
Q  197 catttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgc 296  Q
    |||||||||||| || | ||||||||||| ||||||||||||| |||||   ||||||||||||  |||| || ||||| | |||||||     ||||||    
T  35732188 catttactaaaatactcctattaattgtaattagtggagtagtaaagttagatgaaattcaatatataagagtataataataggaaaaa-----aaatgc 35732094  T
Q  297 tgcattggtattgtaaagtgagaattattttg 328  Q
    | ||||| |||| |||||||| ||||||||||    
T  35732093 tacattgatattttaaagtgataattattttg 35732062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 249 - 327
Target Start/End: Complemental strand, 50831 - 50753
Alignment:
Q  249 tgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
    ||||||| ||||| ||| ||| ||||| ||| |||| |||||||||||||||||| |||| |||||||| |||||||||    
T  50831 tgaaatttaataaataaaggtataataatggaaaaagataataaatgctgcattgatattctaaagtgacaattatttt 50753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 157 - 266
Target Start/End: Original strand, 5878998 - 5879108
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagtta-agttgactgaaatt 255  Q
    |||||||||||  ||||||||| |||||||||||  ||| |||| ||||||||||| ||||||||| | ||||||||| || ||| || ||| ||||||     
T  5878998 aaatgattaatattgttgattttaatggtaaaatatgtatcattcactaaaacacatttattaattatggttagtggaataattatagatgattgaaatg 5879097  T
Q  256 caataagtaag 266  Q
    |||||| ||||    
T  5879098 caataaataag 5879108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 330
Target Start/End: Complemental strand, 32631465 - 32631349
Alignment:
Q  213 cttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaa 312  Q
    |||||||||||| |||||||||||| ||||||||  ||||||| ||| | |||| ||||||||||  |||||||||||| ||  ||||||| |||| | |    
T  32631465 cttattaattgttgttagtggagtaattaagttgtgtgaaatttaatgaataagtgtgtaatagt-agaaaaaataatagatattgcattgatattttta 32631367  T
Q  313 agtgagaattattttgag 330  Q
    ||||  | ||||||||||    
T  32631366 agtggcatttattttgag 32631349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 261
Target Start/End: Original strand, 34057626 - 34057731
Alignment:
Q  156 aaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaatt 255  Q
    ||||| ||||||| |||||||||||||  ||||| |||||  ||||||||||| |   || ||| |||||||||||| | |||||||||||  |||||||    
T  34057626 aaaataattaattatgttgatttcaataataaaactagtattatttactaaaatatcgttgttatttgtagttagtgaaatagttaagttggatgaaatt 34057725  T
Q  256 caataa 261  Q
    ||||||    
T  34057726 caataa 34057731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 222
Target Start/End: Complemental strand, 39890728 - 39890663
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaatt 222  Q
    ||||||||| ||| ||||| ||||||  ||||||||||||||||||||||||||  ||||||||||    
T  39890728 aaatgattagttgagttgacttcaataataaaattagtagcatttactaaaacattcttattaatt 39890663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 6796024 - 6796099
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcattta 202  Q
    |||||||| ||||||||| ||||||||  |||||||||||  | |||||||| ||||||||||||| || ||||||    
T  6796024 tcgtttaatgtttgtgcacgattattaataaaatgattaacagcgttgattttaatggtaaaattaatatcattta 6796099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 204
Target Start/End: Original strand, 10953406 - 10953464
Alignment:
Q  146 gattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttact 204  Q
    |||||||| | |||||||||||||||||||||| |||| || ||||| |||||||||||    
T  10953406 gattattaaggaaatgattaattgtgttgattttaatgatataattaatagcatttact 10953464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 204
Target Start/End: Original strand, 10961411 - 10961469
Alignment:
Q  146 gattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttact 204  Q
    |||||||| | |||||||||||||||||||||| |||| || ||||| |||||||||||    
T  10961411 gattattaaggaaatgattaattgtgttgattttaatgatataattaatagcatttact 10961469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 330
Target Start/End: Complemental strand, 1739594 - 1739478
Alignment:
Q  213 cttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaa 312  Q
    |||||||||||||||||||  ||||||||| ||   ||||||| ||||| ||||||| ||| |||| ||||||| |||||||| | ||||| ||||  ||    
T  1739594 cttattaattgtagttagttaagtagttaattttgatgaaatttaataaataagggtataaaagtgagaaaaaa-aataaatgttacattgatattcgaa 1739496  T
Q  313 agtgagaattattttgag 330  Q
    | ||| ||||||| ||||    
T  1739495 aatgataattattctgag 1739478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 346 - 379
Target Start/End: Complemental strand, 7172847 - 7172814
Alignment:
Q  346 taaagagacaataattgtgagacggagggagtat 379  Q
    ||||||||||||||||||||||||||||||||||    
T  7172847 taaagagacaataattgtgagacggagggagtat 7172814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 201 - 315
Target Start/End: Original strand, 21649414 - 21649530
Alignment:
Q  201 tactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtggga--aaaaataataaatgctg 298  Q
    |||||||| ||| ||||||||  |||||||| |||||||||| |||| ||||||||||||| ||| | | |||| |||| |  ||||| |||||||| ||    
T  21649414 tactaaaatacatttattaatcatagttagttgagtagttaaattgaatgaaattcaataaataatgatataattgtggaaagaaaaaaaataaatggtg 21649513  T
Q  299 cattggtattgtaaagt 315  Q
    ||||  |||| ||||||    
T  21649514 cattactattctaaagt 21649530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 330
Target Start/End: Complemental strand, 36967388 - 36967308
Alignment:
Q  249 tgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    ||||||||||||| ||||||| ||||| ||  ||||||||||||||  ||||||| |||| |||||| | ||||||||||||    
T  36967388 tgaaattcaataaataagggtataataatga-aaaaaataataaattatgcattgatattctaaagtaacaattattttgag 36967308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 330
Target Start/End: Complemental strand, 40109751 - 40109647
Alignment:
Q  225 agttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattat 324  Q
    ||||||| |||||||||| | || ||||||||||||| ||||  | || |||||| |||| |||||||||| ||||||  |||| |||| ||| ||||||    
T  40109751 agttagtagagtagttaaatagagtgaaattcaataaataagaatatattagtggaaaaatataataaatgttgcatt-atattctaaaatgacaattat 40109653  T
Q  325 tttgag 330  Q
    ||||||    
T  40109652 tttgag 40109647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 195
Target Start/End: Complemental strand, 32678855 - 32678787
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagta 195  Q
    |||||||| |||| | || |||||||| | ||||||||||||||||||||||  ||||||||| |||||    
T  32678855 tcgtttaaagtttatacacgattattaaggaaatgattaattgtgttgattttgatggtaaaactagta 32678787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 40109841 - 40109789
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaac 209  Q
    |||||||||||||  ||||||||||| ||||||||||||  ||||||||||||    
T  40109841 aaatgattaattgaattgatttcaatagtaaaattagtataatttactaaaac 40109789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 9839835 - 9839914
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagt 236  Q
    |||||||||| ||| |||||||||| | |||||||||||  ||||| ||||| ||| | ||||||| |||||||| ||||    
T  9839835 aaatgattaaatgttttgatttcaacgataaaattagtattatttattaaaatacattcattaattatagttagttgagt 9839914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 12559700 - 12559649
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaa 208  Q
    |||||||||||||||||||||| |||  |||||||| || ||||||||||||    
T  12559700 aaatgattaattgtgttgattttaataataaaattaataccatttactaaaa 12559649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 15809989 - 15810093
Alignment:
Q  155 gaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaat 254  Q
    ||||||||||| ||  |||||||| ||||||| ||||| ||  ||||||||||||||  ||||| |||||||||||| |  || |||||| || ||||||    
T  15809989 gaaaatgattagttcagttgattttaatggtagaattaatattatttactaaaacac-tttatt-attgtagttagtaggataattaagtggagtgaaat 15810086  T
Q  255 tcaataa 261  Q
    |||||||    
T  15810087 tcaataa 15810093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 191
Target Start/End: Complemental strand, 39329404 - 39329370
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaatt 191  Q
    ||||||||||||||||||||||||||| |||||||    
T  39329404 aaatgattaattgtgttgatttcaatgataaaatt 39329370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 27976722 - 27976649
Alignment:
Q  197 catttactaaaacacacttattaattgtagttagtggagtagtta-agttgactgaaattcaataagtaagggt 269  Q
    |||||| |||||||  ||||||||||||||||||| || |||||| || ||| |||||| |||||| |||||||    
T  27976722 catttagtaaaacagccttattaattgtagttagtagaatagttatagatgattgaaatgcaataaataagggt 27976649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 28033991 - 28033918
Alignment:
Q  197 catttactaaaacacacttattaattgtagttagtggagtagtta-agttgactgaaattcaataagtaagggt 269  Q
    |||||| |||||||  ||||||||||||||||||| || |||||| || ||| |||||| |||||| |||||||    
T  28033991 catttagtaaaacagccttattaattgtagttagtagaatagttatagatgattgaaatgcaataaataagggt 28033918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 29806330 - 29806375
Alignment:
Q  197 catttactaaaacacacttattaattgtagttagtggagtagttaa 242  Q
    |||||||||||||||  ||||||| ||||||||||||| |||||||    
T  29806330 catttactaaaacacttttattaactgtagttagtggaatagttaa 29806375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 39329153 - 39329088
Alignment:
Q  130 tttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagta 195  Q
    |||||| |||||| |  ||| ||| ||||||||||||||||||| |||| |||| |||||||||||    
T  39329153 tttaagttttgtgtacaatttttaagaaaatgattaattgtgttaattttaatgataaaattagta 39329088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 295
Target Start/End: Original strand, 43719302 - 43719383
Alignment:
Q  214 ttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatg 295  Q
    ||||||||| |||||||| || || ||||||||  ||||||||||||| ||| ||| ||||||| | | |||||| ||||||    
T  43719302 ttattaattatagttagttgaataattaagttggatgaaattcaataaataaaggtataatagttgaataaaatagtaaatg 43719383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 135716 - 135760
Alignment:
Q  197 catttactaaaacacacttattaattgtagttagtggagtagtta 241  Q
    ||||| |||||||||  ||||||||| ||||||||||||||||||    
T  135716 catttgctaaaacactattattaattatagttagtggagtagtta 135760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 137; Significance: 2e-71; HSPs: 103)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 115 - 327
Target Start/End: Complemental strand, 34360804 - 34360592
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| |||||||| ||||||||| ||||||||   |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||    
T  34360804 tcacaatattaatcgtttaaagtttgtgcacgattattaaagaaatgattaattgtattgatttcaatggtaaaattagtagcatttactaaaacactct 34360705  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaag 314  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||| ||||||| ||||||||| |||||| || ||||| |  |||||||||||||||    
T  34360704 tattaattgtagttagtggagtagttaagttgaataaaattcaataaataagggtataatagtggaaaaaaaaaaaaaatgttaaattggtattgtaaag 34360605  T
Q  315 tgagaattatttt 327  Q
    ||| |||||||||    
T  34360604 tgacaattatttt 34360592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 115 - 327
Target Start/End: Original strand, 47464337 - 47464550
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| |||||||||||||| ||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  47464337 tcacaatattagtcgtttaaggtttgagcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaaaactct 47464436  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgg-gaaaaaataataaatgctgcattggtattgtaaa 313  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||| ||||||| |||||||||  ||||||||||||||  |||||||||||||||||    
T  47464437 tattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtataatagtggaaaaaaaataataaataatgcattggtattgtaaa 47464536  T
Q  314 gtgagaattatttt 327  Q
      || |||||||||    
T  47464537 acgataattatttt 47464550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 117 - 379
Target Start/End: Original strand, 35311197 - 35311460
Alignment:
Q  117 acaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacactta 216  Q
    |||||||||  ||||||||||||||||| |||||||| | |||||||||||| |||| |||||||||||||||||| | |||||||||| ||||| ||||    
T  35311197 acaatattaagcgtttaaggtttgtgcacgattattaaggaaatgattaattatgttaatttcaatggtaaaattaattgcatttactagaacactctta 35311296  T
Q  217 ttaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaa--aataataaatgctgcattggtattgtaaag 314  Q
    ||||||||||||||||||||| ||||||||  ||||||||||||| ||| ||| ||||| ||| ||||  ||||||||||| ||||||||||||||||||    
T  35311297 ttaattgtagttagtggagtaattaagttggatgaaattcaataaataaaggtataatattggaaaaaataataataaatgttgcattggtattgtaaag 35311396  T
Q  315 tgagaattattttgagnnnnnnnnnnnntgctaaagagacaataattgtgagacggagggagtat 379  Q
    ||| ||||||||||||            |||||||||||||||||||||||||||||||||||||    
T  35311397 tgacaattattttgag-aaaaaaaaacatgctaaagagacaataattgtgagacggagggagtat 35311460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 115 - 378
Target Start/End: Original strand, 6643632 - 6643894
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| | |||||| ||||| ||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||   |    
T  6643632 tcacaatattagtagtttaatgtttgagcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacatctt 6643731  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaag 314  Q
    |||||||||||||||||||  |||||||||||  ||||||||||||| ||||||| ||||||| |||||||  |||||||||||| |||  |||||||||    
T  6643732 tattaattgtagttagtggtatagttaagttggatgaaattcaataaataagggtataatagt-ggaaaaataaataaatgctgcgttgaaattgtaaag 6643830  T
Q  315 tgagaattattttgagnnnnnnnnnnnntgctaaagagacaataattgtgagacggagggagta 378  Q
    ||| ||||||||||||            ||||||||||||||||||||||||||||| ||||||    
T  6643831 tgacaattattttgaggaaaagaaaatatgctaaagagacaataattgtgagacggatggagta 6643894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 117 - 327
Target Start/End: Original strand, 40122828 - 40123039
Alignment:
Q  117 acaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacactta 216  Q
    ||||||||| ||||||||| |||||||| |||||||| | ||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| ||||    
T  40122828 acaatattagtcgtttaagctttgtgcacgattattaaggaaatgattaattgcgttgattttaatgttaaaattagtagcatttactaaaacaccctta 40122927  T
Q  217 ttaattgtagttagtggagtagttaagtt-gactgaaattcaataagtaagggtgtaatagtggg-aaaaaataataaatgctgcattggtattgtaaag 314  Q
    || |||||||||||||||| ||||||||| ||| |||||||||||| |||||||  ||| ||||| ||||||||||||||| ||||||||||||||||||    
T  40122928 ttgattgtagttagtggagcagttaagttcgac-gaaattcaataaataagggtacaatggtgggaaaaaaataataaatgttgcattggtattgtaaag 40123026  T
Q  315 tgagaattatttt 327  Q
    ||| |||||||||    
T  40123027 tgataattatttt 40123039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 127 - 330
Target Start/End: Original strand, 49175918 - 49176122
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||  |||||||||| ||||||||||| |||||||||||| |  ||||||||||||||    
T  49175918 tcgtttaaggtttgtgcatgatttttaagaaaatgattaattgtggagatttcaatgataaaattagtatcatttactaaaataaccttattaattgtag 49176017  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtggg-aaaaaataataaatgctgcattggtattgtaaagtgagaattatt 325  Q
    |||| |||||||||||||||  | ||||||||||| ||||||| |||||||||| |||||||||||| || |||||||||||| |||||||| |||||||    
T  49176018 ttagcggagtagttaagttggataaaattcaataaataagggtataatagtgggaaaaaaataataattgttgcattggtattctaaagtgacaattatt 49176117  T
Q  326 ttgag 330  Q
    |||||    
T  49176118 ttgag 49176122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 115 - 294
Target Start/End: Original strand, 17237268 - 17237447
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    |||||||| || || |||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||  ||    
T  17237268 tcacaatactagtcatttaaggtttgtgcatgattattaagaaaataattaattgtgttgattgcaatggtaaaattagtaacatttactaaaacaacct 17237367  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaat 294  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||| ||||||| ||||||||| ||||| ||||||||    
T  17237368 tattaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtataatagtggaaaaaactaataaat 17237447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 115 - 286
Target Start/End: Complemental strand, 32884950 - 32884779
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||    
T  32884950 tcacaatattagtcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtagaattagtagcatttagtaaaacactct 32884851  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaa 286  Q
    ||||||||||||||||||||||||||||||||  || |||||||||| ||||| | ||||||||| ||||||    
T  32884850 tattaattgtagttagtggagtagttaagttggatggaattcaataaataaggatataatagtggaaaaaaa 32884779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 115 - 327
Target Start/End: Original strand, 16821303 - 16821516
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    |||||| |||| |||||||||||||||||| ||||||||    |||||||||||||||||||||||||| ||||||||||| ||||||||| || |  ||    
T  16821303 tcacaaaattagtcgtttaaggtttgtgcacgattattaatgcaatgattaattgtgttgatttcaatgataaaattagtatcatttactataatatcct 16821402  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaa-aataataaatgctgcattggtattgtaaa 313  Q
    |||||||| |||||||||||||| ||||||||| ||||||||||||| ||||||| ||||||||  |||| |||||||||||||||||||||||| ||||    
T  16821403 tattaattatagttagtggagtatttaagttgaatgaaattcaataaataagggtataatagtgcaaaaataataataaatgctgcattggtattctaaa 16821502  T
Q  314 gtgagaattatttt 327  Q
    |||| |||||||||    
T  16821503 gtgacaattatttt 16821516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 115 - 330
Target Start/End: Original strand, 7061636 - 7061851
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| ||||||||||||||| || |||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||| || |   |    
T  7061636 tcacaatattagtcgtttaaggtttgtacacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtatcatttactataatatctt 7061735  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaag 314  Q
    |||||||||||||||||||| || ||||||||| ||||||||||||| ||||||| ||||||||  || |||||||||||| || |||| |||| |||||    
T  7061736 tattaattgtagttagtggattaattaagttgaatgaaattcaataaataagggtataatagtgaaaataaataataaatgttgtattgatattttaaag 7061835  T
Q  315 tgagaattattttgag 330  Q
    | | ||||||||||||    
T  7061836 taacaattattttgag 7061851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 127 - 330
Target Start/End: Original strand, 47773003 - 47773206
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||  ||||   |||||| | |||| |||||||||||||||||  ||||||||||||||| ||||||||||||||| ||||||||||||||    
T  47773003 tcgtttaaggttgatgcacagttattaaggaaataattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtag 47773102  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||||||||||||||||||||  |||| |||||||| ||||||| | ||| ||| |||||||||||||||||||||||||||| |||||||| ||||||||    
T  47773103 ttagtggagtagttaagttggatgaagttcaataaataagggtattataatggaaaaaaataataaatgctgcattggtattctaaagtgacaattattt 47773202  T
Q  327 tgag 330  Q
    ||||    
T  47773203 tgag 47773206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 131 - 330
Target Start/End: Original strand, 52859787 - 52859981
Alignment:
Q  131 ttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttag 230  Q
    |||||| || |||| |||||||| | ||||||||||||||||||||||  ||||||||||||||| ||||||||||||||  ||||||||||||||||||    
T  52859787 ttaaggcttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacatccttattaattgtagttag 52859886  T
Q  231 tggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    ||||||||||||||||| |||||||||||     ||||| ||||| ||||||||||||||||||| |||||||||||| |||||||| ||||||||||||    
T  52859887 tggagtagttaagttgaatgaaattcaat-----agggtataataatgggaaaaaataataaatgttgcattggtattctaaagtgacaattattttgag 52859981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 127 - 330
Target Start/End: Original strand, 33790715 - 33790920
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||| |||| |||||||| ||||||||||||||||||||||||  ||||||||||||||  ||||| ||||||||| ||||||||||||||    
T  33790715 tcgtttaaggtttatgcacgattattaagaaaatgattaattgtgttgattttgatggtaaaattagtttcatttgctaaaacacccttattaattgtag 33790814  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtggga--aaaaataataaatgctgcattggtattgtaaagtgagaattat 324  Q
    ||||||||||||||||||||  ||||||||||||| ||||||| ||||| ||| |  ||||| |||||||||||| |||| ||| |||||||| ||||||    
T  33790815 ttagtggagtagttaagttggatgaaattcaataaataagggtataataatggaaagaaaaaaaataaatgctgcgttggaattctaaagtgacaattat 33790914  T
Q  325 tttgag 330  Q
    ||||||    
T  33790915 tttgag 33790920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 146 - 378
Target Start/End: Original strand, 35380336 - 35380569
Alignment:
Q  146 gattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagtt 245  Q
    |||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||||||| ||||||||    
T  35380336 gattattaagaaaatgattaattatgttgattttaatggtaaaattagtagcatttactaaaacatcattattaattgtagttagtggagtggttaagtt 35380435  T
Q  246 gactgaaattcaataagtaagggtgtaatagtgg-gaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgagnnnnnnnnnnnntg 344  Q
    |  ||||||||||||| |||| || ||||| |||  ||||||||||||||| |||||||||||| |||||||| ||||||||||||            ||    
T  35380436 ggatgaaattcaataaataagagtataataatggaaaaaaaataataaatgttgcattggtattataaagtgacaattattttgagaaaaagaaaaattg 35380535  T
Q  345 ctaaagagacaataattgtgagacggagggagta 378  Q
    ||||||||| ||||||||||||||||| ||||||    
T  35380536 ctaaagagataataattgtgagacggatggagta 35380569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 130 - 330
Target Start/End: Original strand, 11907586 - 11907786
Alignment:
Q  130 tttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtta 229  Q
    |||||||||  |||| |||||||| | ||||||||||||||||||||||  ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  11907586 tttaaggttaatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtta 11907685  T
Q  230 gtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttga 329  Q
     ||||||||||||||||  |||| |||||||| |||  || | ||| ||| |||||||||||||||||||||||||||| |||||||| |||||||||||    
T  11907686 ttggagtagttaagttggatgaagttcaataaataaatgtattataatggaaaaaaataataaatgctgcattggtattctaaagtgacaattattttga 11907785  T
Q  330 g 330  Q
    |    
T  11907786 g 11907786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 127 - 330
Target Start/End: Original strand, 38405086 - 38405290
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||||||||||||| |||||||| | |||||||||||| ||||||||| ||||||||||||| || |||||||||||| || ||||||||||||||    
T  38405086 tcgtttaaggtttgtgcacgattattaaggaaatgattaattctgttgatttaaatggtaaaattaatatcatttactaaaatacccttattaattgtag 38405185  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaa-taataaatgctgcattggtattgtaaagtgagaattatt 325  Q
    ||||||| ||||||||||||  ||||||||||||| ||| ||| ||||| ||| |||||| ||||||||| ||||||| |||| |||||||| |||||||    
T  38405186 ttagtggtgtagttaagttggatgaaattcaataaataaaggtataataatggaaaaaaagtaataaatgttgcattgctattctaaagtgacaattatt 38405285  T
Q  326 ttgag 330  Q
    |||||    
T  38405286 ttgag 38405290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 127 - 379
Target Start/End: Original strand, 49428326 - 49428577
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||| |||| |||||||| | ||||||||| |||||||||||||||||||||||||| ||  ||||||||||| || ||||||||||||||    
T  49428326 tcgtttaaggtttttgcacgattattaaggaaatgattatttgtgttgatttcaatggtaaaattaatataatttactaaaatacccttattaattgtag 49428425  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||||||||||| ||||||||  ||||||||||||| ||||||| ||||| ||| ||||| ||||||||| ||||||| | || |||||||| ||||||||    
T  49428426 ttagtggagtaattaagttggatgaaattcaataaataagggtataataatggaaaaaagtaataaatgttgcattgat-ttctaaagtgacaattattt 49428524  T
Q  327 tgagnnnnnnnnnnnntgctaaagagacaataattgtgagacggagggagtat 379  Q
    ||||            || |||||||||||| |||||||||||||||||||||    
T  49428525 tgagaaaaagaaaaaatggtaaagagacaattattgtgagacggagggagtat 49428577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 115 - 330
Target Start/End: Complemental strand, 22130196 - 22129976
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgt----gttgatttcaatggtaaaattagtagcatttactaaaaca 210  Q
    ||||||||||| |||||||||||||||||| | |||||| | ||||||||||||||    |||||||||||||||| |||||||| ||||||| ||||||    
T  22130196 tcacaatattagtcgtttaaggtttgtgcacggttattaaggaaatgattaattgtatgtgttgatttcaatggtataattagtatcatttacaaaaaca 22130097  T
Q  211 cacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgg-gaaaaaataataaatgctgcattggtattg 309  Q
      ||||||||||||||||||||||||| ||||||||  ||||||||||||| ||| ||| ||||| |||  ||||||||||||||| |||||||||||||    
T  22130096 tccttattaattgtagttagtggagtaattaagttggatgaaattcaataaataaaggtataataatggaaaaaaaataataaatgttgcattggtattg 22129997  T
Q  310 taaagtgagaattattttgag 330  Q
    |||| ||| ||||||||||||    
T  22129996 taaaatgacaattattttgag 22129976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 105 - 327
Target Start/End: Original strand, 44536158 - 44536381
Alignment:
Q  105 tccttccatttcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttact 204  Q
    ||||||| | ||||||||||| | |||||| |||| |||| |||||||| | |||||||||||||||||||||| |||||||||||||| || ||||| |    
T  44536158 tccttccctctcacaatattaattgtttaaagtttatgcacgattattaaggaaatgattaattgtgttgattttaatggtaaaattagcaggatttatt 44536257  T
Q  205 aaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaat--aataaatgctgcatt 302  Q
    ||||||| |||||||||||||||||||||||||| ||||||   |||||||||| || ||||||| ||||||||| ||| |||  |||||||||||||||    
T  44536258 aaaacacccttattaattgtagttagtggagtagctaagttagatgaaattcaa-aaataagggtataatagtggaaaagaataaaataaatgctgcatt 44536356  T
Q  303 ggtattgtaaagtgagaattatttt 327  Q
     |||||||||||||| |||||||||    
T  44536357 agtattgtaaagtgacaattatttt 44536381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 127 - 330
Target Start/End: Original strand, 42616887 - 42617090
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||| |||||||||||||||||   |||||||||| ||||||||||||||||||||||||| || |||||||||||| |   |||||||||||||    
T  42616887 tcgtttaagttttgtgcatgattattaaagaaatgattaactgtgttgatttcaatggtaaaattaatatcatttactaaaatatttttattaattgtag 42616986  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    | |||||||||||||||| || ||||||||||||| |||| || ||||| ||| ||| ||||||||||| |||||| ||||| |||||||| ||||||||    
T  42616987 taagtggagtagttaagtcgaatgaaattcaataaataagtgtataataatggaaaataataataaatgttgcatttgtattctaaagtgacaattattt 42617086  T
Q  327 tgag 330  Q
    ||||    
T  42617087 tgag 42617090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 115 - 329
Target Start/End: Complemental strand, 49747109 - 49746895
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| || || |||| ||||||| ||||||||  ||||| |||||||||||||||||||||| |||||||||||| ||||||||||| ||  |    
T  49747109 tcacaatattagtcattcaaggcttgtgcacgattattaa-aaaataattaattgtgttgatttcaatgataaaattagtagtatttactaaaatacctt 49747011  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaa-aataataaatgctgcattggtattgtaaa 313  Q
     ||||||| |||||||| ||||||||||||||  ||||||||||||| ||||||| ||||| ||| |||| ||||||||||| |||||||||||||||||    
T  49747010 cattaattatagttagttgagtagttaagttggatgaaattcaataaataagggtataataatggaaaaataataataaatgttgcattggtattgtaaa 49746911  T
Q  314 gtgagaattattttga 329  Q
    |||| |||||||||||    
T  49746910 gtgacaattattttga 49746895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 2066926 - 2066725
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||| |||| |||||||| | ||||||||||||||||||||||  |||||||| ||||||  ||||| |||||||| |||||||||| |||    
T  2066926 tcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaagttagtattatttattaaaacacccttattaattttag 2066827  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||||||| |||||||||||   ||||||||||||| ||| ||| ||||| |  |||||||||||||||||| |||||||||| |||||||| ||||||||    
T  2066826 ttagtggggtagttaagttagatgaaattcaataaataaaggtataataat--gaaaaaataataaatgcttcattggtattctaaagtgacaattattt 2066729  T
Q  327 tgag 330  Q
    ||||    
T  2066728 tgag 2066725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 127 - 327
Target Start/End: Original strand, 52247412 - 52247611
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||||| ||||||| |||||||| ||||||||||||||||||| |||||||||||||||||| ||  ||||||||||| |  ||||||||||||||    
T  52247412 tcgtttaaggattgtgcacgattattaagaaaatgattaattgtgttaatttcaatggtaaaattaatacaatttactaaaatatccttattaattgtag 52247511  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||||||||||||||||||||| ||||||||| ||| |||| || ||||  ||| ||| ||||||||||| |  |||||| ||||||||||| ||||||||    
T  52247512 ttagtggagtagttaagttgaatgaaattcattaaataagtgtataatgatggaaaagaataataaatgttctattggt-ttgtaaagtgacaattattt 52247610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 115 - 292
Target Start/End: Original strand, 2942617 - 2942793
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| |||||||||||||||  | ||||||||   ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||    
T  2942617 tcacaatattagtcgtttaaggtttgtataagattattaaagaaatgattaattgtgttgatttcgatgataaaattagtagcatttactaaaacac-ct 2942715  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataa 292  Q
    |||||||||||||||||||||| |||||||||| |||| ||||||||  || | | ||||||||| ||||||||||||    
T  2942716 tattaattgtagttagtggagtggttaagttgaatgaatttcaataaacaaagatataatagtggaaaaaaataataa 2942793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 127 - 330
Target Start/End: Original strand, 5841411 - 5841615
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||||||||  | ||||| | |||||||| |||| |||||||| ||||||||||||| || |||||||||||| || ||||||||||||||    
T  5841411 tcgtttaaggtttgtgcacaactattaaggaaatgattgattgcgttgattttaatggtaaaattaatatcatttactaaaatacccttattaattgtag 5841510  T
Q  227 ttagtggagtag-ttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattatt 325  Q
    |||||||||||| ||||||||  ||||||||||||| ||| ||| ||||| ||| ||  ||||||||||| ||||||| |||| |||||||| |||||||    
T  5841511 ttagtggagtagtttaagttggatgaaattcaataaataaaggtataataatggaaattaataataaatgatgcattgatattctaaagtgacaattatt 5841610  T
Q  326 ttgag 330  Q
    |||||    
T  5841611 ttgag 5841615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 129 - 327
Target Start/End: Complemental strand, 2653553 - 2653357
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    ||||||| |||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||| |||||| ||||| || ||||||||||||||||    
T  2653553 gtttaagatttgtgcatgattatta--aaaatgattaattgtgttgatttcaattgtaaaattagtatcatttattaaaatactcttattaattgtagtt 2653456  T
Q  229 agtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
    |  ||||||||||| |||  ||||||| ||||| ||| ||| ||||| ||| |||| |||||||||| ||||||| |||| |||||||| || ||||||    
T  2653455 aaaggagtagttaaattggatgaaatttaataaataaaggtataataatggaaaaagataataaatgttgcattgatattctaaagtgacaactatttt 2653357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 157 - 330
Target Start/End: Complemental strand, 36985893 - 36985720
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattc 256  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| || | ||||||||||||||||| || || ||||||||  ||||||||    
T  36985893 aaatgattaattgtgttgatttcaatggtaaaattagtatcatttactaaaatacccgtattaattgtagttagtagaataattaagttggatgaaattc 36985794  T
Q  257 aataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    ||||| ||||||| |||| |||| |||||| | |||||||| ||||| |||| |||| ||| ||||||||||||    
T  36985793 aataaataagggtataatggtggaaaaaaacagtaaatgcttcattgatattctaaactgacaattattttgag 36985720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 115 - 317
Target Start/End: Complemental strand, 43237392 - 43237188
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| ||||||||||||| |||| |||||||| | ||||||||||||||||| |||||||||||||||||||||  ||||||||||| |   |    
T  43237392 tcacaatattagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgtttatttcaatggtaaaattagtaatatttactaaaaaatcat 43237293  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaa--aataataaatgctgcattggtattgtaa 312  Q
    |||||||| ||||||||| |||||||||||||  ||||||||||||| |||| || ||||||||  ||||  ||||||||||| |||||| |||  ||||    
T  43237292 tattaattatagttagtgaagtagttaagttggatgaaattcaataaataagtgtataatagtgaaaaaaataataataaatgttgcattagtaccgtaa 43237193  T
Q  313 agtga 317  Q
    |||||    
T  43237192 agtga 43237188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 127 - 327
Target Start/End: Complemental strand, 17114577 - 17114377
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||  ||||   |||||| | ||||||||||||||||||||||  ||||||||||||||| ||||||||||||||| ||||||||||||||    
T  17114577 tcgtttaaggttgatgcacagttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtag 17114478  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    |||||||||||||||| |||   ||| |||||||| ||| ||| | ||| ||| ||||||||||||| |||||||  ||||| |||| ||| ||||||||    
T  17114477 ttagtggagtagttaatttggaggaagttcaataaataaaggtattataatggaaaaaaataataaacgctgcataagtattctaaaatgacaattattt 17114378  T
Q  327 t 327  Q
    |    
T  17114377 t 17114377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 115 - 330
Target Start/End: Original strand, 38663420 - 38663631
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| ||||||||||||| || | ||||||||  |||| | ||||||  |||| ||||||||||||||||||||||||||||||||||||  |    
T  38663420 tcacaatattagtcgtttaaggttt-tgaacgattattacaaaaacggttaattccgttgttttcaatggtaaaattagtagcatttactaaaacacttt 38663518  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaag 314  Q
    ||||||| |||||||||  |||||||||||||  ||||||| ||||| || ||||  ||||||||   |||| || ||||| ||| |||||||||| |||    
T  38663519 tattaatcgtagttagtaaagtagttaagttggatgaaatttaataaatatgggtacaatagtgg---aaaaaaaaaaatgatgctttggtattgttaag 38663615  T
Q  315 tgagaattattttgag 330  Q
    ||||||||||||||||    
T  38663616 tgagaattattttgag 38663631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 117 - 261
Target Start/End: Complemental strand, 53346906 - 53346762
Alignment:
Q  117 acaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacactta 216  Q
    ||||||||| ||||||||  |||||||| |||||||| |||||| ||| ||||||||  ||||||||||||||||| |||||||||||||||||| ||||    
T  53346906 acaatattagtcgtttaaaatttgtgcacgattattaagaaaataattgattgtgttagtttcaatggtaaaattaatagcatttactaaaacaccctta 53346807  T
Q  217 ttaattgtagttagtggagtagttaagttgactgaaattcaataa 261  Q
    |||||| ||||||||||||||||||||||   |||||||||||||    
T  53346806 ttaattttagttagtggagtagttaagtttgatgaaattcaataa 53346762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 147 - 380
Target Start/End: Original strand, 21240708 - 21240937
Alignment:
Q  147 attattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttg 246  Q
    ||||||| | |||||||||| |||||||||||  ||||||||||||||| |||||||||| |||  ||||||||||||||||||| ||||||||||||||    
T  21240708 attattaaggaaatgattaactgtgttgattttgatggtaaaattagtatcatttactaacacatccttattaattgtagttagttgagtagttaagttg 21240807  T
Q  247 actgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgagnnnnnnnnnnnntgct 346  Q
      ||||||||||||| ||||||| ||||| |||   ||||| ||||||| ||||||| |||| |||||||| | ||||||||||            || |    
T  21240808 gatgaaattcaataaataagggtataataatgg---aaaat-ataaatgttgcattgatattctaaagtgacatttattttgagaaaaataaaaattggt 21240903  T
Q  347 aaagagacaataattgtgagacggagggagtata 380  Q
    ||||||| ||| ||||||||||||||||||||||    
T  21240904 aaagagataattattgtgagacggagggagtata 21240937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 163 - 330
Target Start/End: Original strand, 26147635 - 26147805
Alignment:
Q  163 ttaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaa-attcaataa 261  Q
    ||||||||||||||||  ||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||| ||||||||  ||||  ||||||||    
T  26147635 ttaattgtgttgattttgatggtaaaattagtatcatttactaaaacattcttattaattgtagttagtggagtaattaagttggatgaattttcaataa 26147734  T
Q  262 gtaagggtgtaatagtgggaaaaaat--aataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
     ||||||| ||||| ||| |||||||  |||||||| || ||||||||| |||||||| ||||||||||||    
T  26147735 ataagggtataataatggaaaaaaataaaataaatgttgtattggtattctaaagtgacaattattttgag 26147805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 128 - 330
Target Start/End: Original strand, 28500876 - 28501072
Alignment:
Q  128 cgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagt 227  Q
    ||||||| ||||||||| |||||||| | |||||||| ||||||||||||||||||||||||||| || |||||||||||| || ||||||||||| |||    
T  28500876 cgtttaatgtttgtgcacgattattaaggaaatgattgattgtgttgatttcaatggtaaaattaatatcatttactaaaatacccttattaattgcagt 28500975  T
Q  228 tagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtggg--aaaaaataataaatgctgcattggtattgtaaagtgagaattatt 325  Q
            ||||||||||   ||||||||||||| ||||||| ||||| ||||  ||||||||||||||| || ||||||||| ||||| || |||||||    
T  28500976 --------tagttaagtttgatgaaattcaataaataagggtataataatgggaaaaaaaataataaatgttgtattggtattctaaagagacaattatt 28501067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 115 - 327
Target Start/End: Original strand, 46396855 - 46397055
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||   ||||||||||||||||| ||| |||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||    
T  46396855 tcacaatatttgccgtttaaggtttgtgcacgatcattaagtaaatgattaattgtgttgatttcaatggtaaaattaatagcatttactaaaacactct 46396954  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaag 314  Q
    ||||||||            ||||||||||||  | ||||||| ||| ||||||| ||||| ||| ||||| ||||||||| || ||| |||| ||||||    
T  46396955 tattaatt------------gtagttaagttggataaaattcattaaataagggtataataatggaaaaaactaataaatgttgtattcgtatcgtaaag 46397042  T
Q  315 tgagaattatttt 327  Q
    ||| |||||||||    
T  46397043 tgacaattatttt 46397055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 127 - 327
Target Start/End: Complemental strand, 6609898 - 6609694
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||| |||| |||| |||||||| | ||||||||||||||||||||||  ||||||||||||||| ||||||| ||||||   ||||||||||||     
T  6609898 tcgtttaaagtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttacaaaaacatctttattaattgtaa 6609799  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgg-gaaaaaataataaatgctgcat---tggtattgtaaagtgagaatt 322  Q
    ||| ||||||||||||||||  ||||| ||||||| |||| || ||||| |||  ||||||||||||||| |||||   | ||||| |||||||| ||||    
T  6609798 ttattggagtagttaagttggatgaaactcaataaataagagtataataatggaaaaaaaataataaatgttgcattagtagtattctaaagtgacaatt 6609699  T
Q  323 atttt 327  Q
    |||||    
T  6609698 atttt 6609694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 124 - 326
Target Start/End: Complemental strand, 19265948 - 19265744
Alignment:
Q  124 tactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattg 223  Q
    |||||||||||  ||| |||| | |||||| |||||||||||||| | || ||||||||  |||||||| |   ||||| ||||| |  ||||||||||     
T  19265948 tactcgtttaaactttctgcacggttattaagaaaatgattaattatatttatttcaataataaaattaatgttatttattaaaataaccttattaatta 19265849  T
Q  224 tagttagtggagtagttaagttgactgaaattcaataagtaagggtgta--atagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaat 321  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||  ||| ||| |||||||| |||||| |||||| ||||| |||||||| |||    
T  19265848 tagttagtggagtagttaagttgaatgaaattcaataattaagggtgtaatataatggaaaaaaatactaaatgttgcattagtattctaaagtgacaat 19265749  T
Q  322 tattt 326  Q
    |||||    
T  19265748 tattt 19265744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 118 - 290
Target Start/End: Original strand, 47358924 - 47359095
Alignment:
Q  118 caatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttat 217  Q
    ||||| || |||||||| |||||||||||||   || |||||| ||| |||||||||||||||||| ||||||||| |  |||| |||||| ||  ||||    
T  47358924 caataataatcgtttaatgtttgtgcatgatgtctaagaaaattattgattgtgttgatttcaatgataaaattagaataattttctaaaatacttttat 47359023  T
Q  218 taattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataat 290  Q
    |||||||||| ||||||||| ||||||||| ||||||||||||| |||||||| |||||| ||||||||||||    
T  47359024 taattgtagtcagtggagtaattaagttgaatgaaattcaataaataagggtgcaatagt-ggaaaaaataat 47359095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 204 - 330
Target Start/End: Complemental strand, 51624846 - 51624720
Alignment:
Q  204 taaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattg 303  Q
    ||||||||  |||||| ||||||||||||||||||||||||||  ||||||||||||| ||||||| | ||||||| ||||||||||||||| | |||||    
T  51624846 taaaacacttttattatttgtagttagtggagtagttaagttggatgaaattcaataaataagggtatgatagtggaaaaaaataataaatgttacattg 51624747  T
Q  304 gtattgtaaagtgagaattattttgag 330  Q
     ||||||||||||| ||||||||||||    
T  51624746 atattgtaaagtgacaattattttgag 51624720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 115 - 330
Target Start/End: Complemental strand, 4972709 - 4972507
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| ||||||||| |||||||| ||||||||   |||||||||||||||||||||||||| | |||||| ||  ||||||||||||||| ||    
T  4972709 tcacaatattagtcgtttaagatttgtgcacgattattaatgaaatgattaattgtgttgatttcaattgaaaaattggtgacatttactaaaacactct 4972610  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaag 314  Q
    |||||||||||||||        ||||    || ||||||||||||| |||| || ||||||| | ||||||||||||||| | ||||||||||||||||    
T  4972609 tattaattgtagtta-------tgtta----ga-tgaaattcaataaataagtgtataatagt-gaaaaaaataataaatgttacattggtattgtaaag 4972523  T
Q  315 tgagaattattttgag 330  Q
    ||| | ||||||||||    
T  4972522 tgacagttattttgag 4972507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 127 - 301
Target Start/End: Complemental strand, 3689699 - 3689525
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||| || | | ||||||   |||||||||||||| |||||||  ||||||||||||||| ||||||||||||||| |||||||||| |||    
T  3689699 tcgtttaaggtttatgtacggttattaaagaaatgattaattgtattgattttgatggtaaaattagtatcatttactaaaacactcttattaattatag 3689600  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcat 301  Q
    ||||| |||| ||||||||   ||||||| ||| | ||||||| ||||| ||| ||| ||||||||||| |||||    
T  3689599 ttagttgagttgttaagttagatgaaattaaattaataagggtataataatggaaaataataataaatgttgcat 3689525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 127 - 261
Target Start/End: Original strand, 11288614 - 11288747
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||| || | |||||||| |||||||||||||||| ||||||||||||| ||||||| || |||||||||||| |  ||||||||||||||    
T  11288614 tcgtttaaggtttatgtacgattattaagaaaatgattaattgtattgatttcaatggcaaaattaatatcatttactaaaata-tcttattaattgtag 11288712  T
Q  227 ttagtggagtagttaagttgactgaaattcaataa 261  Q
    || |||||||||||||||||  | |||||||||||    
T  11288713 ttggtggagtagttaagttggataaaattcaataa 11288747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 130 - 275
Target Start/End: Complemental strand, 462092 - 461947
Alignment:
Q  130 tttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtta 229  Q
    |||||| ||||||||| ||| ||| |||||||||||||||| |||||||||||||||||| || ||  ||||||||||| |  ||||||||||||| |||    
T  462092 tttaagatttgtgcataatttttaagaaaatgattaattgtattgatttcaatggtaaaagtaatattatttactaaaatatccttattaattgtaatta 461993  T
Q  230 gtggagtagttaagttgactgaaattcaataagtaagggtgtaata 275  Q
    | |||||||||||||||| | |||||||| || ||||||| |||||    
T  461992 gcggagtagttaagttgaataaaattcaacaaataagggtataata 461947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 157 - 330
Target Start/End: Complemental strand, 25233288 - 25233116
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattc 256  Q
    |||| |||||||||||| ||||  ||||||||||||||| |||||||||||||||   |||||||| ||||||||| |||||||||||||  |||| |||    
T  25233288 aaataattaattgtgttaattttgatggtaaaattagtatcatttactaaaacactagtattaattatagttagtgaagtagttaagttggatgaagttc 25233189  T
Q  257 aataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    ||||| ||| | | | ||| | | ||||||||||||||| ||||||| |||| |||||||| ||||||||||||    
T  25233188 aataaataaagatattataat-gaaaaaaataataaatgttgcattgatattctaaagtgacaattattttgag 25233116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 127 - 326
Target Start/End: Original strand, 30682180 - 30682380
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||| |||| || |||||  |||||||||||||||||| |||| | ||||||||||| || ||||||||| || |  ||||||| ||||||    
T  30682180 tcgtttaaggtttttgcacgactattaaaaaaatgattaattgtgttaattttattggtaaaattaatatcatttactataatatccttattagttgtag 30682279  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaa-aataataaatgctgcattggtattgtaaagtgagaattatt 325  Q
    ||||| |||||||||| |||| ||||||||||||| |||  |  ||||| ||  |||| ||||||||||||| ||||| | || |||||||| |||||||    
T  30682280 ttagtagagtagttaatttgaatgaaattcaataaataaaagcataataatgaaaaaataataataaatgctacattgattttctaaagtgacaattatt 30682379  T
Q  326 t 326  Q
    |    
T  30682380 t 30682380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 51625220 - 51625136
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacac 211  Q
    |||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  51625220 tcgtttaaagtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtaacatttactaaaacac 51625136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 127 - 327
Target Start/End: Complemental strand, 54506925 - 54506725
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||| |||||  | | |||||| |||||||||||| ||||||||||||||||||||||||| || |||||| ||||| |   |||| ||||||||    
T  54506925 tcgtttaagatttgtttacggttattaagaaaatgattaactgtgttgatttcaatggtaaaattaatatcatttattaaaatatcattatcaattgtag 54506826  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    |||||||||||||||||||   ||||||||||| | ||||  | ||||| ||  ||| ||||||||||| ||||| | |||| ||||| || ||||||||    
T  54506825 ttagtggagtagttaagtttgatgaaattcaattaataagaatataataatgaaaaataataataaatgttgcatcgatattataaagcgataattattt 54506726  T
Q  327 t 327  Q
    |    
T  54506725 t 54506725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 146 - 327
Target Start/End: Complemental strand, 53412226 - 53412044
Alignment:
Q  146 gattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagtt 245  Q
    |||| ||| ||||| |||||||| | |||||||||||||||||||||||| |||||||||||| |   ||||||||| ||||| ||||| ||||||||||    
T  53412226 gatttttaagaaaacgattaattttattgatttcaatggtaaaattagtatcatttactaaaatatttttattaattatagtttgtggaatagttaagtt 53412127  T
Q  246 gactgaaattcaataagtaagggtgtaatagtg-ggaaaaaataataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
    |  ||||||||||||| |||  || ||||||||   ||||||||||| ||| | |||||||||| |||| ||| |||||||||    
T  53412126 ggatgaaattcaataaataaaagtataatagtgaaaaaaaaataatagatgttacattggtattctaaaatgacaattatttt 53412044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 165 - 286
Target Start/End: Original strand, 50264102 - 50264223
Alignment:
Q  165 aattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagta 264  Q
    ||||||||||||||||||| ||||||||  | |||||||||||| || |||||||||||||||||||| | || ||||||||| ||||||||||||| ||    
T  50264102 aattgtgttgatttcaatgttaaaattaacatcatttactaaaatactcttattaattgtagttagtgaaatatttaagttgaatgaaattcaataaata 50264201  T
Q  265 agggtgtaatagtgggaaaaaa 286  Q
    ||||| ||||| ||| ||||||    
T  50264202 agggtataataatggaaaaaaa 50264223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 131 - 327
Target Start/End: Original strand, 42517626 - 42517830
Alignment:
Q  131 ttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttag 230  Q
    |||| |||||| || |||||||| ||||||||||||||||||||||||||||||||||||||  | |||||||||||| || |||||||||| |||||||    
T  42517626 ttaatgtttgtacacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattaagatcatttactaaaatacccttattaattatagttag 42517725  T
Q  231 tg---gagtagttaagttgactgaaattcaataagtaagggtgtaatagtggga-----aaaaataataaatgctgcattggtattgtaaagtgagaatt 322  Q
    ||    | |||| |||||   ||||||||||||| |||  || ||||| ||  |     || |||||||||||||||||| ||||| |||||||| ||||    
T  42517726 tgaaatactagtaaagttagatgaaattcaataaataacagtataataatgaaagtaataataataataaatgctgcatttgtattttaaagtgacaatt 42517825  T
Q  323 atttt 327  Q
    |||||    
T  42517826 atttt 42517830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 127 - 330
Target Start/End: Original strand, 49579162 - 49579363
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttga-tttcaatggtaaaattagtagcatttactaaaacacacttattaattgta 225  Q
    |||||||| |||||||||||||| |||   ||||||||||||||||||| ||| |||| |||||||| ||  | ||||||||||||  ||||||||||||    
T  49579162 tcgtttaaagtttgtgcatgatttttaaataaatgattaattgtgttgatttttaatgataaaattattatta-ttactaaaacacttttattaattgta 49579260  T
Q  226 gttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattatt 325  Q
    |||| || | | |||||||||  ||||||||||||| ||||  |||| ||||   ||||||||| ||||  ||||||| |||| |||||||| |||||||    
T  49579261 gttattgaaattgttaagttggatgaaattcaataaataagaatgtactagt-aaaaaaaataa-aaatattgcattgatattttaaagtgacaattatt 49579358  T
Q  326 ttgag 330  Q
    |||||    
T  49579359 ttgag 49579363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 127 - 266
Target Start/End: Original strand, 38502466 - 38502605
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||  |||||  |||||| | |||| |||||||||||||||||  ||||||||||||||| |||||| ||||| ||  ||||||||| |||    
T  38502466 tcgtttaaggttgatgcatagttattaaggaaataattaattgtgttgattttgatggtaaaattagtatcatttattaaaatacttttattaattatag 38502565  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaag 266  Q
    ||| || |||||||||||||  | ||||||||||| ||||    
T  38502566 ttaatgtagtagttaagttggataaaattcaataaataag 38502605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 129 - 330
Target Start/End: Original strand, 41711442 - 41711644
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    ||||||||||||||||  ||| ||||| |||||||||||| ||||||||| ||||||||||||| || |||||  ||||| |   || |||||| || ||    
T  41711442 gtttaaggtttgtgcacaatttttatggaaatgattaattatgttgattttaatggtaaaattaatatcattttttaaaatatcatttttaattttattt 41711541  T
Q  229 agtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgg-gaaaaaataataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
    || ||||| ||||||||   ||||||||||||| ||||| |  ||||||||  |||||||||||||||||  |||  |||| |||  ||| |||||||||    
T  41711542 agcggagttgttaagttttatgaaattcaataaataaggatacaatagtggaaaaaaaataataaatgctctatttatattctaatatgacaattatttt 41711641  T
Q  328 gag 330  Q
    |||    
T  41711642 gag 41711644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 148 - 313
Target Start/End: Original strand, 23915435 - 23915599
Alignment:
Q  148 ttattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttga 247  Q
    |||||| | ||||||||| | |||||||||| |||||||||||  ||   |||||||||||||   ||||||||| ||||||||||||||||| || |||    
T  23915435 ttattaaggaaatgattagtagtgttgattttaatggtaaaatatgtttaatttactaaaacatcattattaattatagttagtggagtagtt-aggtga 23915533  T
Q  248 ctgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaa 313  Q
     |||||| |||||| |||| ||||  |||| | ||| ||||||||||| || ||||||||||||||    
T  23915534 ttgaaatacaataaataagagtgtgttagtagaaaagaataataaatgttgtattggtattgtaaa 23915599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 129 - 326
Target Start/End: Complemental strand, 35998946 - 35998750
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    |||||| |||| || | ||||||||  ||||| |||| || ||||||||| ||  |||||||||||| |||||| ||||| |   |||||||||||||||    
T  35998946 gtttaatgtttttgtacgattattaaaaaaattattatttatgttgattttaacagtaaaattagtaacatttattaaaatatcattattaattgtagtt 35998847  T
Q  229 agtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
      ||||||||||||||||  || |||||||||| ||| | | ||||||||  ||| |||||||||||||  |||| ||||||||| ||| ||||||||    
T  35998846 gatggagtagttaagttggatg-aattcaataaataaagatataatagtgaaaaagaataataaatgctatattgatattgtaaattgacaattattt 35998750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 129 - 229
Target Start/End: Original strand, 32469934 - 32470034
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    ||||||| ||| ||||| ||| | | |||||||||||||||||||||||| |||||||||||||||| |||||| |||||||  |||||||| |||||||    
T  32469934 gtttaagatttatgcataattttaaagaaaatgattaattgtgttgattttaatggtaaaattagtatcatttattaaaacattcttattaactgtagtt 32470033  T
Q  229 a 229  Q
    |    
T  32470034 a 32470034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 119 - 266
Target Start/End: Original strand, 18741450 - 18741597
Alignment:
Q  119 aatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttatt 218  Q
    ||||||| ||||||| |||||||||| |||| |    |||||  |||||| | |||||||||| ||||||||||||  |||||| ||||| |   |||||    
T  18741450 aatattaatcgtttagggtttgtgcacgattttctaaaaaattgttaattatattgatttcaacggtaaaattagtgtcatttattaaaatatctttatt 18741549  T
Q  219 aattgtagttagtggagtagttaagttgactgaaattcaataagtaag 266  Q
    ||||||||||| ||||||||||||||||  ||||||||||||| ||||    
T  18741550 aattgtagttaatggagtagttaagttggatgaaattcaataaataag 18741597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 52869221 - 52869107
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||| ||||| ||||||||||||||||||  ||||||| | |||| ||||||||||||||||||||| |||| |||| || | |||| ||||| ||  |    
T  52869221 tcacattattagtcgtttaaggtttgtgcacaattattaaggaaataattaattgtgttgatttcaatagtaagattaatatcgtttattaaaatacctt 52869122  T
Q  215 tattaattgtagtta 229  Q
    |||||||||||||||    
T  52869121 tattaattgtagtta 52869107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 54921803 - 54921877
Alignment:
Q  253 attcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
    ||||||||| ||||||| |||||||| ||||||||||||||||||  |||||||||||||||||| |||||||||    
T  54921803 attcaataaataagggtataatagtgagaaaaaataataaatgctaaattggtattgtaaagtgacaattatttt 54921877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 129 - 222
Target Start/End: Original strand, 8175566 - 8175659
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaatt 222  Q
    ||||| || ||||||||||||||||  ||||||| ||||||||||||||||||||||||||||| || |||||| ||||| || ||| ||||||    
T  8175566 gtttatggcttgtgcatgattattaaaaaaatgaataattgtgttgatttcaatggtaaaattaatatcatttattaaaatactcttgttaatt 8175659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 30192340 - 30192227
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    |||||| |||||| || |||| ||| ||||||||||||||||||||||||||||  |||||||| |  ||||| |||||| |  ||||||||||||||||    
T  30192340 gtttaatgtttgtacacgatttttaagaaaatgattaattgtgttgatttcaattataaaattaatgtcatttgctaaaatattcttattaattgtagtt 30192241  T
Q  229 agtggagtagttaa 242  Q
    ||| ||||| ||||    
T  30192240 agtagagtaattaa 30192227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 127 - 329
Target Start/End: Complemental strand, 5618679 - 5618483
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||| ||||||||  ||||||||  |||||||| | |||||||||||| |||||||||||||  |  ||||| ||||| |  |||||||||||| |    
T  5618679 tcgtttaatgtttgtgctcgattattaaaaaaatgatgagttgtgttgattttaatggtaaaattaaaattatttattaaaatatccttattaattgttg 5618580  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaat-aataaatgctgcattggtattgtaaagtgagaattatt 325  Q
    |     |||| || ||||||| |||||||||||||  || | | ||||| |  |||||||| |||||||||||||||| |||| |||||||| |||||||    
T  5618579 t-----gagtggtaaagttgaatgaaattcaataaaaaaagttataataat--gaaaaaataaataaatgctgcattgatattttaaagtgacaattatt 5618487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 214 - 330
Target Start/End: Complemental strand, 10754423 - 10754308
Alignment:
Q  214 ttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaa 313  Q
    ||||||||||||||||||||| || ||||||||| ||||||| ||||| |||| || |||| || || ||||||||||| || |||||||||||| || |    
T  10754423 ttattaattgtagttagtggaataattaagttgaatgaaatttaataaataagagtataatggttgg-aaaaataataattgttgcattggtattttaga 10754325  T
Q  314 gtgagaattattttgag 330  Q
     ||| ||||||||||||    
T  10754324 ttgacaattattttgag 10754308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 214 - 330
Target Start/End: Complemental strand, 10968192 - 10968077
Alignment:
Q  214 ttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaa 313  Q
    ||||||||||||||||||||| || ||||||||| ||||||| ||||| |||| || |||| || || ||||||||||| || |||||||||||| || |    
T  10968192 ttattaattgtagttagtggaataattaagttgaatgaaatttaataaataagagtataatggttgg-aaaaataataattgttgcattggtattttaga 10968094  T
Q  314 gtgagaattattttgag 330  Q
     ||| ||||||||||||    
T  10968093 ttgacaattattttgag 10968077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 113 - 225
Target Start/End: Original strand, 27880212 - 27880323
Alignment:
Q  113 tttcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacaca 212  Q
    ||||| |||| || |||||||||||||||  |||||| |||   ||||||||| ||||||||||||||||||||||||||||| ||||||||| || ||     
T  27880212 tttcaaaataatagtcgtttaaggtttgtatatgatttttaaataaatgatta-ttgtgttgatttcaatggtaaaattagtatcatttactagaatact 27880310  T
Q  213 cttattaattgta 225  Q
    ||||| |||||||    
T  27880311 cttatcaattgta 27880323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 326
Target Start/End: Complemental strand, 7987074 - 7986914
Alignment:
Q  164 taattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagt 263  Q
    |||| |||||||||| |||| ||||||||||| ||| |||||||| |   ||||||||| | |||||| ||||||||||||| | ||||||| ||||| |    
T  7987074 taatagtgttgattttaatgataaaattagtatcatctactaaaatattattattaattattgttagtagagtagttaagtttaatgaaattaaataaat 7986975  T
Q  264 aagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||  || |||||  ||||||| ||||||| || | ||||| |||| |||||||| ||||||||    
T  7986974 aaaagtataata--gggaaaatataataagtgttacattgatattttaaagtgataattattt 7986914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 117 - 275
Target Start/End: Complemental strand, 39397491 - 39397333
Alignment:
Q  117 acaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacactta 216  Q
    |||||| || |||||||| ||||||||| |||  ||| | |||||||||||| ||||||||||| ||||||| ||| |  ||||||||||||  | | ||    
T  39397491 acaataataatcgtttaaagtttgtgcacgatgtttaaggaaatgattaattatgttgatttcattggtaaatttaatgtcatttactaaaatccccata 39397392  T
Q  217 ttaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaata 275  Q
    ||||||||||||| | || |||||||  ||  ||||||| ||||| ||||||| |||||    
T  39397391 ttaattgtagttactagattagttaaaatggatgaaatttaataaataagggtataata 39397333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 261
Target Start/End: Original strand, 20612184 - 20612289
Alignment:
Q  156 aaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaatt 255  Q
    |||||||||| ||| |||||||||| || |||| ||||||  ||||||||||||||  ||||||||||||| || || |||||||||||  | |||||||    
T  20612184 aaaatgattagttgagttgatttcattgctaaagttagtataatttactaaaacaccattattaattgtagataatgaagtagttaagtgaattgaaatt 20612283  T
Q  256 caataa 261  Q
    ||||||    
T  20612284 caataa 20612289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 109 - 229
Target Start/End: Complemental strand, 29575263 - 29575143
Alignment:
Q  109 tccatttcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaa 208  Q
    ||||| ||| ||||||| ||||||||  ||||| || ||||| || |||||||||||||| |||| |||| |||| |||||||| || |||||| |||||    
T  29575263 tccatctcataatattagtcgtttaaaatttgtacacgattactaagaaaatgattaattatgttaatttaaatgataaaattaataacatttattaaaa 29575164  T
Q  209 cacacttattaattgtagtta 229  Q
     || ||| |||||||||||||    
T  29575163 tactcttgttaattgtagtta 29575143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 129 - 294
Target Start/End: Complemental strand, 18532314 - 18532149
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtt 228  Q
    ||||||||||||||||||||| |||   |||||||||||| | |  |||| ||||||||||||||||  ||||| ||||| |   ||||||||| ||||     
T  18532314 gtttaaggtttgtgcatgatttttacataaatgattaattatataaattttaatggtaaaattagtatgatttattaaaatagttttattaattatagta 18532215  T
Q  229 agtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaat 294  Q
    |||||||| ||||| | |  ||||||||||||| | | | | ||||||||  ||| ||||||||||    
T  18532214 agtggagtggttaactaggatgaaattcaataaattatgatataatagtgaaaaataataataaat 18532149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 146 - 242
Target Start/End: Original strand, 39157876 - 39157973
Alignment:
Q  146 gattattatgaaaatgattaattgtgttga-tttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaa 242  Q
    |||||||| ||||||||||| ||||||| | |||  ||||||||||| ||  |||||||||||| ||||||||||||| ||| |||| ||||||||||    
T  39157876 gattattaagaaaatgattagttgtgtttaattttgatggtaaaatttgtttcatttactaaaatacacttattaattatagctagtagagtagttaa 39157973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 261
Target Start/End: Original strand, 48914157 - 48914266
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagt-----agcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactga 251  Q
    |||| |||||||||||| ||||||||||||||||||||     | ||| |||||||| |  ||||||| |||||||||||| |||| ||||||| | |||    
T  48914157 aaataattaattgtgttcatttcaatggtaaaattagtactccatcatatactaaaatatccttattatttgtagttagtgaagtaattaagtttaatga 48914256  T
Q  252 aattcaataa 261  Q
    ||||||||||    
T  48914257 aattcaataa 48914266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 147 - 222
Target Start/End: Original strand, 34321715 - 34321788
Alignment:
Q  147 attattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaatt 222  Q
    ||||||| |||||||||||||||||||||||| |||||||||||  |||   |||||||||||||| |||||||||    
T  34321715 attattaagaaaatgattaattgtgttgattttaatggtaaaatgtgta--ctttactaaaacacatttattaatt 34321788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 326
Target Start/End: Complemental strand, 35252026 - 35251837
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||| || ||||||||||||| | | |||||| |||||||||| | ||||||||| |||||||| || |||||||||||| ||  |||              
T  35252026 tcgtttgagatttgtgcatgattttcaagaaaataattaattgtggttatttcaatgataaaattaatatcatttactaaaataccatta---------- 35251937  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||||||||||| |||||||   ||||||||||||| ||||| | ||||| ||  ||| ||||||||||| ||  |||||||| |||| ||| ||||||||    
T  35251936 ttagtggagtaattaagttagatgaaattcaataaataaggatataataatgaaaaataataataaatgttgttttggtattctaaattgataattattt 35251837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 242
Target Start/End: Original strand, 16506248 - 16506332
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaa 242  Q
    |||| ||||||| |||| ||||||||| |  ||| |||| |||||||||||||||| |||||||||||||||| ||||||| ||||    
T  16506248 aaattattaattatgttaatttcaatgatgcaat-agtaacatttactaaaacacatttattaattgtagttaatggagtaattaa 16506332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 327
Target Start/End: Original strand, 17512347 - 17512524
Alignment:
Q  151 ttatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactg 250  Q
    |||| |||||||||| ||| |||||||| || |||||||||| ||  ||||||||||| ||  ||||||||||||||| || || || |||||| || |     
T  17512347 ttataaaaatgattagttgagttgattttaaaggtaaaattaatataatttactaaaataccattattaattgtagtttgtcgaataattaagtagagtt 17512446  T
Q  251 aaattcaataa-gtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
     ||||||||||  |||| |  || |||||| ||||||||||||||  | ||||  |||| |||| ||| |||||||||    
T  17512447 gaattcaataatataagtgcatattagtggaaaaaaataataaatattacattcatattttaaaatgacaattatttt 17512524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 278
Target Start/End: Complemental strand, 43902360 - 43902237
Alignment:
Q  158 aatgattaattgtgttgatttcaatggtaaaattagtagcatt---tactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaat 254  Q
    ||||||||||| ||||||||| |||| |||||||| ||  |||   || ||||| |  |||||||||  |||||||||||||| ||||||||  ||||||    
T  43902360 aatgattaattatgttgattttaatgataaaattaatattattatttattaaaatattcttattaatcatagttagtggagtaattaagttgcatgaaat 43902261  T
Q  255 tcaataagtaagggtgtaatagtg 278  Q
    ||||||| ||||||  ||||||||    
T  43902260 tcaataaataagggcataatagtg 43902237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 240
Target Start/End: Original strand, 7270452 - 7270540
Alignment:
Q  156 aaaatgattaattgtgttgatttcaatggtaaaattagtag----catttactaaaacacacttattaattgtagttagtggagtagtt 240  Q
    |||||||||||| ||||| |||| |||||||||||  |||     |||||||||||||||| ||||||||| |||||||||| ||||||    
T  7270452 aaaatgattaatagtgttaattttaatggtaaaatatgtacatatcatttactaaaacacatttattaattatagttagtggtgtagtt 7270540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 327
Target Start/End: Original strand, 28911249 - 28911340
Alignment:
Q  236 tagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
    ||||||||||   ||||||||||||| |||| || ||||| ||| ||||||||||||||| ||||||| |||| ||||  || |||||||||    
T  28911249 tagttaagtttgatgaaattcaataaataagagtataataatggaaaaaaataataaatgttgcattgatattctaaatcgacaattatttt 28911340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 50263916 - 50263967
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgattt 178  Q
    |||||||||||||||||| |||||||| |||||||||| | |||||||||||    
T  50263916 tcgtttaaggtttgtgcacgattattaagaaaatgattcactgtgttgattt 50263967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 21325178 - 21325224
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttac 203  Q
    ||||||| ||||||||| ||||||||||||||||||||| |||||||    
T  21325178 aaatgataaattgtgtttatttcaatggtaaaattagtatcatttac 21325224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 25869856 - 25869902
Alignment:
Q  155 gaaaatgattaattgtgttgatttcaatggtaaaattagtagcattt 201  Q
    ||||||||||||||||||||||||||||  ||||||||||| |||||    
T  25869856 gaaaatgattaattgtgttgatttcaattttaaaattagtaacattt 25869902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 327
Target Start/End: Complemental strand, 29295209 - 29295163
Alignment:
Q  281 aaaaaataataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
    |||||||||||||| ||||||||||||| |||||||| |||||||||    
T  29295209 aaaaaataataaatactgcattggtattctaaagtgataattatttt 29295163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 266
Target Start/End: Complemental strand, 30261055 - 30261002
Alignment:
Q  213 cttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaag 266  Q
    ||||||||||||| ||||| |||||||||||| || ||||||||||||| ||||    
T  30261055 cttattaattgtaattagtagagtagttaagtagagtgaaattcaataaataag 30261002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 216 - 313
Target Start/End: Original strand, 31370373 - 31370469
Alignment:
Q  216 attaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaa 313  Q
    ||||||| |||||||||||||||||||||||  ||||| ||||||| |||  || ||||| | | ||||||||||||||| || |||| |||| ||||    
T  31370373 attaattatagttagtggagtagttaagttggatgaaaatcaataaataaatgtataataat-gcaaaaaataataaatgttgtattgttattttaaa 31370469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 261
Target Start/End: Complemental strand, 44526451 - 44526382
Alignment:
Q  192 agtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataa 261  Q
    |||| |||||| |||||||  |||||||||||||||||||||| |||| ||||||  ||||||| |||||    
T  44526451 agtaacatttattaaaacatccttattaattgtagttagtggaatagtgaagttggatgaaatttaataa 44526382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 290
Target Start/End: Original strand, 37836189 - 37836257
Alignment:
Q  222 tgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataat 290  Q
    |||||||||| ||||||||| ||||| | ||||||||| | || |||| ||||||| ||||||||||||    
T  37836189 tgtagttagtagagtagttaggttgagtaaaattcaattaatatgggtataatagttggaaaaaataat 37836257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 261
Target Start/End: Complemental strand, 2400844 - 2400781
Alignment:
Q  198 atttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataa 261  Q
    |||||||||||||| || ||| ||||||||| |||||||||||||||  | | |||||||||||    
T  2400844 atttactaaaacaccctcattgattgtagtttgtggagtagttaagtataataaaattcaataa 2400781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 279 - 330
Target Start/End: Complemental strand, 3098467 - 3098416
Alignment:
Q  279 ggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    ||||||||||||||||| ||||||| |||| ||| |||| ||||||||||||    
T  3098467 ggaaaaaataataaatgttgcattgatattttaacgtgataattattttgag 3098416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 178
Target Start/End: Complemental strand, 3670016 - 3669965
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgattt 178  Q
    ||||||||| ||| ||||||||| |||  |||||||||||||||||||||||    
T  3670016 tcgtttaagatttatgcatgatttttaaaaaaatgattaattgtgttgattt 3669965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 241
Target Start/End: Original strand, 11024897 - 11024988
Alignment:
Q  150 attatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagtta 241  Q
    |||| ||||||||||||| |||||||||| ||||||| |||  ||  |||||||||||| |   ||||||||| || |||||| ||||||||    
T  11024897 attaagaaaatgattaatagtgttgattttaatggtataatatgtttcatttactaaaatatttttattaattataattagtgaagtagtta 11024988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 29295307 - 29295253
Alignment:
Q  170 tgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgta 225  Q
    |||||||||  ||||||||||||||| ||||||||||||||  |||||||||||||    
T  29295307 tgttgatttttatggtaaaattagtatcatttactaaaaca-tcttattaattgta 29295253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 346 - 380
Target Start/End: Original strand, 47464570 - 47464604
Alignment:
Q  346 taaagagacaataattgtgagacggagggagtata 380  Q
    |||||||||||||||||||||||||| ||||||||    
T  47464570 taaagagacaataattgtgagacggaaggagtata 47464604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 3098826 - 3098757
Alignment:
Q  156 aaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgta 225  Q
    ||||||||||||| | |||||||||||| |||||||  || |||||||||||| |   ||||||||||||    
T  3098826 aaaatgattaattatattgatttcaatgataaaattgatatcatttactaaaatatctttattaattgta 3098757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 195
Target Start/End: Complemental strand, 10672968 - 10672935
Alignment:
Q  162 attaattgtgttgatttcaatggtaaaattagta 195  Q
    |||||||||||| |||||||||||||||||||||    
T  10672968 attaattgtgttcatttcaatggtaaaattagta 10672935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 10699174 - 10699207
Alignment:
Q  162 attaattgtgttgatttcaatggtaaaattagta 195  Q
    |||||||||||| |||||||||||||||||||||    
T  10699174 attaattgtgttcatttcaatggtaaaattagta 10699207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 195
Target Start/End: Complemental strand, 10754726 - 10754693
Alignment:
Q  162 attaattgtgttgatttcaatggtaaaattagta 195  Q
    |||||||||||| |||||||||||||||||||||    
T  10754726 attaattgtgttcatttcaatggtaaaattagta 10754693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 195
Target Start/End: Complemental strand, 10886608 - 10886575
Alignment:
Q  162 attaattgtgttgatttcaatggtaaaattagta 195  Q
    |||||||||||| |||||||||||||||||||||    
T  10886608 attaattgtgttcatttcaatggtaaaattagta 10886575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 10912944 - 10912977
Alignment:
Q  162 attaattgtgttgatttcaatggtaaaattagta 195  Q
    |||||||||||| |||||||||||||||||||||    
T  10912944 attaattgtgttcatttcaatggtaaaattagta 10912977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 195
Target Start/End: Complemental strand, 10968495 - 10968462
Alignment:
Q  162 attaattgtgttgatttcaatggtaaaattagta 195  Q
    |||||||||||| |||||||||||||||||||||    
T  10968495 attaattgtgttcatttcaatggtaaaattagta 10968462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 194
Target Start/End: Complemental strand, 26885541 - 26885504
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagt 194  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  26885541 aaatgattaattgtattgatttcaatgataaaattagt 26885504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 301
Target Start/End: Original strand, 4739435 - 4739523
Alignment:
Q  213 cttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcat 301  Q
    |||| |||||||||||||||||||| |||||| || |  |||| ||| | ||||||| || |||||  ||| ||||||||||| |||||    
T  4739435 cttaataattgtagttagtggagtaattaagtggattataattaaattaataagggtatattagtgaaaaataataataaatgttgcat 4739523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 13016643 - 13016746
Alignment:
Q  155 gaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtgga-gtagttaagttgactgaaa 253  Q
    ||||||||||| |||  |||||||||||| |||||||| || ||||| ||| || |  | || ||| ||||||||||||| |||||| |||||| |||||    
T  13016643 gaaaatgattatttgacttgatttcaatgataaaattaatatcatttgctataatatccatagtaa-tgtagttagtggaggtagttgagttgagtgaaa 13016741  T
Q  254 ttcaa 258  Q
    |||||    
T  13016742 ttcaa 13016746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 128; Significance: 5e-66; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 115 - 330
Target Start/End: Original strand, 33985 - 34199
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| || ||||||||||||||| |||||||| | |||||||||||||| |||| |||||| ||||||||||| |||||||||||||||| ||    
T  33985 tcacaatattagtcatttaaggtttgtgcacgattattaaggaaatgattaattgtattgaattcaatagtaaaattagtggcatttactaaaacaccct 34084  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaag 314  Q
    |||||||||||||||||| | |||||||||||  ||||||||||||| ||| ||| ||||||| ||||||||||||||||| ||||||| ||||||||||    
T  34085 tattaattgtagttagtgaaatagttaagttggatgaaattcaataaataatggtataatagt-ggaaaaaataataaatgatgcattgatattgtaaag 34183  T
Q  315 tgagaattattttgag 330  Q
    ||| ||||||||||||    
T  34184 tgacaattattttgag 34199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 125; Significance: 3e-64; HSPs: 59)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 127 - 330
Target Start/End: Original strand, 11655923 - 11656127
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||| |||| | |||||| ||||||||||||||||||||||||  ||||||||||||||  ||||||||||||||| ||||||||||||||    
T  11655923 tcgtttaaggtttatgcacggttattaagaaaatgattaattgtgttgattttgatggtaaaattagtgtcatttactaaaacacccttattaattgtag 11656022  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtggg-aaaaaataataaatgctgcattggtattgtaaagtgagaattatt 325  Q
    ||||||||||||| ||||||  ||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||| |||| |||||||| |||||||    
T  11656023 ttagtggagtagtaaagttggatgaaattcaataaataagggtataataatgggaaaaaaataataaatgctgcattgatattctaaagtgacaattatt 11656122  T
Q  326 ttgag 330  Q
    |||||    
T  11656123 ttgag 11656127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 115 - 330
Target Start/End: Original strand, 31894175 - 31894387
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| ||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    |    
T  31894175 tcacaatattaatcgtttaagatttgtgtatgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacgtcat 31894274  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaag 314  Q
    |||||||||||||||||| |||||||||||||  ||||||| ||||| ||||||| |||||||  |||||||||||||||| ||||||| |||||||||     
T  31894275 tattaattgtagttagtgaagtagttaagttggatgaaatttaataaataagggtataatagt--gaaaaaataataaatgttgcattgatattgtaaa- 31894371  T
Q  315 tgagaattattttgag 330  Q
    ||| | ||||||||||    
T  31894372 tgacatttattttgag 31894387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 115 - 330
Target Start/End: Complemental strand, 1781951 - 1781739
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||| ||||||||||||||| |||| |||| ||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||    
T  1781951 tcacaatatcactcgtttaaggtttatgcacgattgttaagaaaatgattaattatgttgatctcaatggtaaaattagtagcatttactaaaacaccct 1781852  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaag 314  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||  || ||| |||||||||||| ||| || ||||| |||| || ||||||||||    
T  1781851 tattaattgtagttagtggagt-gttaagttgaatgaaattcaataa-aaaaggtataatagtgggaagaaa-aaaaaatgttgcaatgatattgtaaag 1781755  T
Q  315 tgagaattattttgag 330  Q
    ||| ||||||||||||    
T  1781754 tgacaattattttgag 1781739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 115 - 378
Target Start/End: Original strand, 3720206 - 3720469
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| |||||||||||||||||| ||||||||   ||||||||||||||||||||||||||  ||||||| |||| |||||| ||||||| ||    
T  3720206 tcacaatattagtcgtttaaggtttgtgcacgattattaatgaaatgattaattgtgttgatttcaattataaaatttgtagtatttacaaaaacactct 3720305  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaag 314  Q
    |||||||||||||||||||| |||||||||||| ||||||||| ||| |||| || ||||||||||    || |||||||| |||||||| ||||||||     
T  3720306 tattaattgtagttagtggaatagttaagttgaatgaaattcagtaaataagagtataatagtgggggggaaaaataaatgatgcattggcattgtaaat 3720405  T
Q  315 tgagaattattttgagnnnnnnnnnnnntgctaaagagacaataattgtgagacggagggagta 378  Q
    ||| ||||||||||||            || |||||||||||||||||||||||||||||||||    
T  3720406 tgacaattattttgagaaaaagaaaaaatgataaagagacaataattgtgagacggagggagta 3720469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 118 - 327
Target Start/End: Complemental strand, 15058263 - 15058055
Alignment:
Q  118 caatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttat 217  Q
    |||||||| |||||||||||||||||| |||||||| ||||||||||||||  ||| |||||||||||||||||||| ||||||||||||| || |||||    
T  15058263 caatattagtcgtttaaggtttgtgcacgattattaagaaaatgattaattaagttaatttcaatggtaaaattagtggcatttactaaaatacccttat 15058164  T
Q  218 taattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtga 317  Q
    ||||||||||||||| |||| ||||||||  ||||||||||||| ||||||| |||||||   ||||||||||||||| ||||| |||||| ||||||||    
T  15058163 taattgtagttagtgaagtatttaagttggatgaaattcaataaataagggtataatagt-acaaaaaataataaatgttgcatcggtattataaagtga 15058065  T
Q  318 gaattatttt 327  Q
     |||||||||    
T  15058064 caattatttt 15058055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 115 - 330
Target Start/End: Complemental strand, 181704 - 181491
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| |||| ||||||||| ||| ||||||||  ||||| ||||||||| ||||||||||| ||||||||||||| |||||||||||||   |    
T  181704 tcacaatattagtcgtctaaggtttgagcacgattattaaaaaaat-attaattgtattgatttcaatagtaaaattagtagtatttactaaaacatcat 181606  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaag 314  Q
    |||||||| |||||||||||||||||||||||  ||||||||||||| ||||||| ||||||||  ||| ||||||||||| |||||| |||||||||||    
T  181605 tattaattatagttagtggagtagttaagttggatgaaattcaataaataagggtataatagtgaaaaataataataaatgttgcatt-gtattgtaaag 181507  T
Q  315 tgagaattattttgag 330  Q
    ||| ||||||||||||    
T  181506 tgacaattattttgag 181491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 115 - 330
Target Start/End: Complemental strand, 23142816 - 23142602
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| |  |||||||||| | || |||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||    
T  23142816 tcacaatattagttatttaaggtttatccacgattattaagaaaatgattaattgtgttgatttcaatggtaaaaatagtggcatttactaaaacaccct 23142717  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaag 314  Q
    |||||||||||| |||||||||||||||| |   |||||||||||||  || ||| ||||| ||||||||||  ||||||| ||||||| ||||||||||    
T  23142716 tattaattgtaggtagtggagtagttaagctagatgaaattcaataaagaa-ggtataataatgggaaaaaacgataaatgttgcattgatattgtaaag 23142618  T
Q  315 tgagaattattttgag 330  Q
    ||| ||||||||||||    
T  23142617 tgacaattattttgag 23142602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 127 - 378
Target Start/End: Complemental strand, 29363443 - 29363190
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||| ||||  ||||||| ||||||||||||||||||||||||  ||||||||| ||||| ||||||||||||||  ||||||||||||||    
T  29363443 tcgtttaaggtttatgcacaattattaagaaaatgattaattgtgttgattttgatggtaaaactagtatcatttactaaaacatccttattaattgtag 29363344  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaa--aataataaatgctgcattggtattgtaaagtgagaattat 324  Q
    |||| ||| |||||||||||  ||||||||||||| |||| || ||||| ||| ||||  |||||||||||||||||||||||| | |||||| ||||||    
T  29363343 ttagcggattagttaagttggatgaaattcaataaataagagtataataatggaaaaaataataataaatgctgcattggtattctgaagtgacaattat 29363244  T
Q  325 tttgagnnnnnnnnnnnntgctaaagagacaataattgtgagacggagggagta 378  Q
    ||||||            || |||||||||||| ||||||||||||||||||||    
T  29363243 tttgagaaaaagaaaagatggtaaagagacaattattgtgagacggagggagta 29363190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 127 - 330
Target Start/End: Original strand, 1063580 - 1063782
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    |||||||| |||| || || ||| ||| ||||||||||||||||||||||||||||| |||||||||||  ||||||||||| || || | |||||||||    
T  1063580 tcgtttaaagtttatgtataatttttaagaaaatgattaattgtgttgatttcaatgataaaattagtattatttactaaaatactctgagtaattgtag 1063679  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||||||||||||||||||| | ||||||| ||||||||||||| |||| |  ||||||||||||||||||| ||| |||||| |||| ||| ||||||||    
T  1063680 ttagtggagtagttaagttaaatgaaatttaataagtaagggtataat-gatggaaaaaataataaatgctacatcggtattttaaaatgacaattattt 1063778  T
Q  327 tgag 330  Q
    ||||    
T  1063779 tgag 1063782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 6802068 - 6801864
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||| ||  |||||| |||||| |||||||||||||| |||||||||  |||||||||||| || ||||||||||||| | ||||||||||||||    
T  6802068 tcgtttaagattgatgcatggttattaagaaaatgattaattatgttgattttgatggtaaaattaatatcatttactaaaacgcccttattaattgtag 6801969  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgg-gaaaaaataataaatgctgcattggtattgtaaagtgagaattatt 325  Q
    ||||||||||||||||||||  |||| ||| |||| ||||||| | ||| |||  ||||||||||||||| ||||||| |||| |||||||| |||||||    
T  6801968 ttagtggagtagttaagttggatgaagttcgataaataagggtattataatggaaaaaaaataataaatgttgcattgatattataaagtgacaattatt 6801869  T
Q  326 ttgag 330  Q
    |||||    
T  6801868 ttgag 6801864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 131 - 330
Target Start/End: Complemental strand, 5302484 - 5302285
Alignment:
Q  131 ttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttag 230  Q
    ||||||||  |||| | |||||| |||||||||||| |||||||||||  |||||||||||| ||  |||||| ||||||  |||||||||||||||||     
T  5302484 ttaaggttgatgcacggttattaagaaaatgattaaatgtgttgattttgatggtaaaattaatataatttaccaaaacatccttattaattgtagttaa 5302385  T
Q  231 tggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    ||||||||||||||||  |||| |||||||| || |||| | ||| ||| |||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  5302384 tggagtagttaagttggatgaagttcaataaatacgggtattataatggaaaaaaataataaatgctgcattagtattctaaagtgacaattattttgag 5302285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 129 - 330
Target Start/End: Complemental strand, 21010312 - 21010105
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag-- 226  Q
    ||||||||||| ||||  ||||||| ||||||||||||||||||| ||||  |||| |||||||||| ||||||||||||||| ||||| ||||||||      
T  21010312 gtttaaggtttatgcacaattattaagaaaatgattaattgtgttaattttgatggaaaaattagtatcatttactaaaacacccttataaattgtagtt 21010213  T
Q  227 --ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgg--gaaaaaataataaatgctgcattggtattgtaaagtgagaatt 322  Q
      ||||||||||||||||||||  ||||||||||||| |||  || ||||| |||   ||||||| |||||||||||||||||||| |||||||| ||||    
T  21010212 aattagtggagtagttaagttggatgaaattcaataaataacagtataataatggaaaaaaaaattataaatgctgcattggtattataaagtgacaatt 21010113  T
Q  323 attttgag 330  Q
    ||||||||    
T  21010112 attttgag 21010105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 127 - 378
Target Start/End: Original strand, 32440622 - 32440875
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||| ||| |||| | |||||  | ||||||||||||||||||||||  |||||||||||||||  |||||||||||||| |||||||||||||     
T  32440622 tcgtttaagatttatgcacggttatttaggaaatgattaattgtgttgattttgatggtaaaattagtattatttactaaaacacccttattaattgtaa 32440721  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggta--ttgtaaagtgagaattat 324  Q
    ||||| ||||||||||||||  ||||||  ||||| ||| |||  |||| ||| ||| ||||||||||||||||||| ||  || |||||||| ||||||    
T  32440722 ttagtagagtagttaagttggatgaaatgtaataaataaaggtacaataatggaaaataataataaatgctgcattgatattttctaaagtgacaattat 32440821  T
Q  325 tttgagnnnnnnnnnnnntgctaaagagacaataattgtgagacggagggagta 378  Q
    ||||||            || |||||||||||| ||||||||||||||||||||    
T  32440822 tttgagaaaaagaaaaaatggtaaagagacaattattgtgagacggagggagta 32440875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 130 - 326
Target Start/End: Complemental strand, 13909558 - 13909361
Alignment:
Q  130 tttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtta 229  Q
    ||||| ||||||||| |||||||| | |||||||||| |||||||||||||||||||||||||||  |||||||||||| || |||||||||||||||||    
T  13909558 tttaaagtttgtgcacgattattaaggaaatgattaaatgtgttgatttcaatggtaaaattagtgacatttactaaaatacccttattaattgtagtta 13909459  T
Q  230 gtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtg-ggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    |||||||| |||||||   ||||||| ||||| |||| || ||||| || | ||||||||||||||| || |||| ||| ||||| | | ||||||||    
T  13909458 gtggagtaattaagttagatgaaattgaataaataagagtataataatgagaaaaaaataataaatgttgtattgatatcgtaaaattacaattattt 13909361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 157 - 330
Target Start/End: Original strand, 24983456 - 24983627
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattc 256  Q
    ||||||||| ||| ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||    
T  24983456 aaatgattagttgagttgatttcaatggtaaaattagtgtcatttactaaaacacccttattaattgtagttagtggagtagttaagttgggtgaaattc 24983555  T
Q  257 aataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    ||||| ||||||| || |||| ||| |||| ||| ||||  || |||||| | |||||||| ||||||||||||    
T  24983556 aataaataagggtatattagt-ggataaaaaaat-aatgtggcgttggtaatctaaagtgacaattattttgag 24983627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 128 - 330
Target Start/End: Complemental strand, 7920374 - 7920175
Alignment:
Q  128 cgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagt 227  Q
    |||||||| |||||||| |||| |||   |||||||||||| |||||||||||||||||||||||  | |||||||||||| |  |||||||||||||||    
T  7920374 cgtttaagatttgtgcacgatttttaaagaaatgattaattttgttgatttcaatggtaaaattaaaaccatttactaaaata-tcttattaattgtagt 7920276  T
Q  228 tagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
    ||||| |||| |||| |||| ||||||||||||| ||| ||| |||||||  ||||||  |||||||| ||||||| |||| |||||||| |||||||||    
T  7920275 tagtgaagtatttaatttgaatgaaattcaataaataatggtataatagt--gaaaaataaataaatgttgcattgatattctaaagtgataattatttt 7920178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 127 - 327
Target Start/End: Original strand, 3291745 - 3291945
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||| |||| |||||||| | |||||||||||||| | ||||| |||||||| |||||||  ||||||||||| ||  |||||||||||||    
T  3291745 tcgtttaaggtttttgcacgattattaaggaaatgattaattgtatcgattttaatggtaatattagtattatttactaaaatacctttattaattgtag 3291844  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    |||||| |||||||||||||  | ||||||||||| |||| || ||| | |||  ||||||||||||| || ||||| |  | |||||||||||||||||    
T  3291845 ttagtgaagtagttaagttggataaaattcaataaataagtgtataacaatggacaaaaataataaatactacattgattatctaaagtgagaattattt 3291944  T
Q  327 t 327  Q
    |    
T  3291945 t 3291945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 148 - 330
Target Start/End: Complemental strand, 30717016 - 30716833
Alignment:
Q  148 ttattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttga 247  Q
    |||||| | |||||||||||| | |||| ||  ||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||| ||||||     
T  30717016 ttattaaggaaatgattaattttattgactttgatggtaaaattagtatcatttacttaaacacccttattaattgtagttagtggagtagtaaagttgg 30716917  T
Q  248 ctgaaattcaataagtaagggtgtaatagtgg-gaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
     | ||||||||||| |||| || | ||| |||  ||||||||||||||| |||| ||||||| |||||||| ||||||||||||    
T  30716916 ataaaattcaataaataagagtattataatggaaaaaaaataataaatgttgcactggtattctaaagtgacaattattttgag 30716833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 161 - 330
Target Start/End: Original strand, 11143597 - 11143766
Alignment:
Q  161 gattaattg-tgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaat 259  Q
    ||||||||| |||||||||  ||| ||||||||||| ||||||||||| ||| |||||||||| ||||||||| |||||||||||||  |||| ||||||    
T  11143597 gattaattgatgttgattttgatgataaaattagtatcatttactaaatcacccttattaattatagttagtgaagtagttaagttggatgaagttcaat 11143696  T
Q  260 aagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    || ||||||| | ||| | | |||||||||||||||||||||||||| | |||||||| |||| |||||||    
T  11143697 aaataagggtattataat-gaaaaaaataataaatgctgcattggtagtctaaagtgacaatttttttgag 11143766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 146 - 266
Target Start/End: Complemental strand, 13087648 - 13087528
Alignment:
Q  146 gattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagtt 245  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||| || ||||||||||||||  |||||||||| ||||||||| |||| |||||||    
T  13087648 gattattaagaaagtgattaattgtgttgatttcaatggtaaaattaatatcatttactaaaacatccttattaattatagttagtgaagtaattaagtt 13087549  T
Q  246 gactgaaattcaataagtaag 266  Q
    |  ||||||||||||| ||||    
T  13087548 ggatgaaattcaataaataag 13087528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 198 - 330
Target Start/End: Original strand, 34657610 - 34657745
Alignment:
Q  198 atttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaa---ataataaat 294  Q
    ||||| ||||||||  |||||||||||||||||||||||||||||||||  ||||||||||||| |||  || ||||||||| |||||   |||||||||    
T  34657610 atttattaaaacacttttattaattgtagttagtggagtagttaagttggatgaaattcaataaataaatgtataatagtggaaaaaaaatataataaat 34657709  T
Q  295 gctgcattggtattgtaaagtgagaattattttgag 330  Q
     |||||| ||||||||||||||| ||||||||||||    
T  34657710 tctgcataggtattgtaaagtgacaattattttgag 34657745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 158 - 327
Target Start/End: Complemental strand, 15582389 - 15582222
Alignment:
Q  158 aatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattca 257  Q
    ||||||||||||||||||||||||||||||||| |||| |||||| ||||| ||| ||| |  |||||||||||| ||| |||||||| | |||||||||    
T  15582389 aatgattaattgtgttgatttcaatggtaaaatcagtatcatttattaaaatacatttacttgttgtagttagtgaagtggttaagtttaatgaaattca 15582290  T
Q  258 ataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
    |||| ||||| | | |||||  ||||||||||||| |  ||||||| |||| |||| ||| |||||||||    
T  15582289 ataaataaggatatgatagt--gaaaaaataataattattgcattgatattctaaaatgacaattatttt 15582222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 150 - 317
Target Start/End: Original strand, 1955979 - 1956146
Alignment:
Q  150 attatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgact 249  Q
    |||| ||||| |||||||||| |||||||||||||||||||||||| |||||||||| | || |||||||||||||||||||| ||||| |  |||   |    
T  1955979 attaagaaaaagattaattgtattgatttcaatggtaaaattagtatcatttactaatatactcttattaattgtagttagtgaagtagctgtgttcgat 1956078  T
Q  250 gaaattcaataagtaagggtgtaatagtg-ggaaaaaataataaatgctgcattggtattgtaaagtga 317  Q
     ||||||||||| ||| ||| ||||| || | ||||||||||||||| ||||||| |||| ||||||||    
T  1956079 aaaattcaataaataa-ggtataataatgagaaaaaaataataaatgttgcattgttattataaagtga 1956146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 130 - 327
Target Start/End: Original strand, 6834349 - 6834545
Alignment:
Q  130 tttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtta 229  Q
    ||||| |||| |||| |||||||| |||||| |||||||||||||||||  || || |||||| || |||||||||||||||  ||||||||| ||||||    
T  6834349 tttaaagtttatgcacgattattaagaaaataattaattgtgttgattttgatagtcaaattaatatcatttactaaaacacctttattaattatagtta 6834448  T
Q  230 gtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
    || || ||| ||| |||| ||| ||||||||| |||   | ||||| ||| |||||||||||| |||||||||| |||| ||| || | |||||||||    
T  6834449 gtagaatagataaattgaatgagattcaataaataa-aatataataatggaaaaaaataataagtgctgcattgatattctaacgtaacaattatttt 6834545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 167 - 327
Target Start/End: Complemental strand, 34300092 - 34299931
Alignment:
Q  167 ttgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaag 266  Q
    |||| ||||||| |||| |||||||||||  ||||||||||| |  |||||||||||| ||||||| |||||||||||||  ||  ||||||||| ||||    
T  34300092 ttgttttgatttgaatgataaaattagtattatttactaaaatatccttattaattgtggttagtgaagtagttaagttggatggtattcaataaataag 34299993  T
Q  267 ggtgtaatagtgggaa-aaaataataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
    | | || |||||| || ||||||||||||| || |||| |||| |||||||| |||||||||    
T  34299992 gatatattagtggaaagaaaataataaatgttgtattgatattctaaagtgacaattatttt 34299931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 329
Target Start/End: Original strand, 23397617 - 23397796
Alignment:
Q  146 gattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagtt 245  Q
    |||| |||||||||| |||| ||| |||||||| |||||||||||||||   |||||||||||||||  |||||| |||||||||||||||| ||||       
T  23397617 gattcttatgaaaattattacttgagttgatttaaatggtaaaattagtgtaatttactaaaacacatctattaagtgtagttagtggagtaattaa--- 23397713  T
Q  246 gactgaaattcaataagtaagggtgtaatagt-gggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttga 329  Q
     || |||||||||||| |||  ||  | || |  |||||| |||||||||| ||||||| |||| |||||||| |||||||||||    
T  23397714 -ac-gaaattcaataaataaaagtaaattactaaggaaaacataataaatgttgcattgatattctaaagtgacaattattttga 23397796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 156 - 317
Target Start/End: Complemental strand, 17835492 - 17835333
Alignment:
Q  156 aaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaatt 255  Q
    ||||| ||||||||| ||||||| |||  |||||||| |  |||||||||||| ||| ||||||||||||||| ||  |||||||||||||  ||| |||    
T  17835492 aaaataattaattgtattgattttaataataaaattaatctcatttactaaaatacatttattaattgtagtttgtttagtagttaagttggatgatatt 17835393  T
Q  256 caataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtga 317  Q
    || ||| ||| ||| ||||| | ||||||||||| ||||| |||||||||||| ||| ||||    
T  17835392 cattaa-taatggtataata-taggaaaaaataacaaatgttgcattggtattctaacgtga 17835333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 1225154 - 1225037
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattc 256  Q
    |||||||||||||||||||||| ||| ||||||||| ||  ||||||||||| |  |||||||||| ||||||||| || ||||||||||  | |||||     
T  1225154 aaatgattaattgtgttgatttaaatagtaaaattaatattatttactaaaatattcttattaattttagttagtgaagaagttaagttggat-aaattg 1225056  T
Q  257 aataagtaagggtgtaata 275  Q
    ||||| ||||||| |||||    
T  1225055 aataaataagggtataata 1225037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 185 - 303
Target Start/End: Complemental strand, 8695124 - 8695006
Alignment:
Q  185 taaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaa 284  Q
    |||||||| |||||||||||||||||  |||||||||||||||||||| ||| ||||| |  | |||||||| |||| ||||  | || |||||| |||     
T  8695124 taaaattaatagcatttactaaaacattcttattaattgtagttagtgaagtggttaaatgaagtgaaattctataaataagaatatactagtggaaaat 8695025  T
Q  285 aataataaatgctgcattg 303  Q
    ||||||||||| |||||||    
T  8695024 aataataaatgttgcattg 8695006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 27448133 - 27448231
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgta 225  Q
    ||||||||||||| ||||  ||||||| | ||||||||||||||||||||||  ||| | ||||||||| ||||||||||||||   ||||||||||||    
T  27448133 tcgtttaaggtttttgcacaattattaaggaaatgattaattgtgttgattttgatgatgaaattagtatcatttactaaaacatcattattaattgta 27448231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 7072297 - 7072220
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttact 204  Q
    |||||||||||||||| || ||| ||| |||||| ||||||||||||||||| |||||||||||||||  ||||||||    
T  7072297 tcgtttaaggtttgtgtataatttttaagaaaataattaattgtgttgattttaatggtaaaattagtgtcatttact 7072220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 329
Target Start/End: Original strand, 21425635 - 21425738
Alignment:
Q  228 tagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaa--ataataaatgctgcattggtattgtaaagtgagaattatt 325  Q
    ||||| |||||||||||||  ||||||||||||| ||||| | |||| |||| |||||  |||||||||| ||||||| ||||||||||| | |||||||    
T  21425635 tagtgaagtagttaagttggatgaaattcaataaataaggatataatggtggaaaaaataataataaatgttgcattgatattgtaaagtaacaattatt 21425734  T
Q  326 ttga 329  Q
    ||||    
T  21425735 ttga 21425738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 330
Target Start/End: Original strand, 27367524 - 27367607
Alignment:
Q  249 tgaaattcaataagtaagggtgtaatagtgggaaaaaa--taataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    ||||||||||||| ||||||| ||||||||| ||||||  ||||||||| | ||||||||||||||||||| ||||||| ||||    
T  27367524 tgaaattcaataaataagggtataatagtggaaaaaaaactaataaatgttacattggtattgtaaagtgacaattattctgag 27367607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 330
Target Start/End: Original strand, 27457871 - 27457954
Alignment:
Q  249 tgaaattcaataagtaagggtgtaatagtgggaaaaaa--taataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    ||||||||||||| ||||||| ||||||||| ||||||  ||||||||| | ||||||||||||||||||| ||||||| ||||    
T  27457871 tgaaattcaataaataagggtataatagtggaaaaaaaactaataaatgttacattggtattgtaaagtgacaattattctgag 27457954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 234
Target Start/End: Original strand, 21804515 - 21804612
Alignment:
Q  136 gtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtgga 234  Q
    |||||||||| ||| |||   |||||||||||||| || |||||||| |||||||||||| |||||||| ||| |  ||||||||||||||||||||||    
T  21804515 gtttgtgcataatttttaaagaaatgattaattgtattaatttcaattgtaaaattagtatcatttacttaaata-tcttattaattgtagttagtgga 21804612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 115 - 196
Target Start/End: Original strand, 34639417 - 34639498
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtag 196  Q
    ||||||||||| |||||| |||||||| || ||||| || | |||| |||||||||||| ||||||||||| ||||||||||    
T  34639417 tcacaatattaatcgtttgaggtttgtacacgattaataaggaaataattaattgtgttaatttcaatggtgaaattagtag 34639498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 216
Target Start/End: Original strand, 27367423 - 27367502
Alignment:
Q  137 tttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacactta 216  Q
    |||||||| ||||||||   |||||||||||||||||||||| | | ||||||||| | |||||||||||||||| ||||    
T  27367423 tttgtgcacgattattaaagaaatgattaattgtgttgattttagttgtaaaattaattgcatttactaaaacaccctta 27367502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 216
Target Start/End: Original strand, 27457770 - 27457849
Alignment:
Q  137 tttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacactta 216  Q
    |||||||| ||||||||   |||||||||||||||||||||| | | ||||||||| | |||||||||||||||| ||||    
T  27457770 tttgtgcacgattattaaagaaatgattaattgtgttgattttagttgtaaaattaattgcatttactaaaacaccctta 27457849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 17829047 - 17828949
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaatt 255  Q
    |||| |||||| ||||| |||||||  ||||||||| || |||||||||||| |   ||||||||||||||||||| |||| ||||||||  |||||||    
T  17829047 aaattattaatagtgttaatttcaacagtaaaattaatatcatttactaaaatatctttattaattgtagttagtgaagtaattaagttggatgaaatt 17828949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 330
Target Start/End: Original strand, 21478194 - 21478275
Alignment:
Q  251 aaattcaataagtaagggtgtaatagtgggaaaaa--ataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    |||| |||||| ||||| | ||||||||| |||||  |||||||||| || |||||||||||||||||| ||||||||||||    
T  21478194 aaatgcaataaataaggttataatagtggaaaaaataataataaatgttgtattggtattgtaaagtgacaattattttgag 21478275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 2423739 - 2423662
Alignment:
Q  143 catgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaa 220  Q
    ||||||||||  |||||||||||||  ||||||||| |||||||||||  ||| |||||| |||||||| ||||||||    
T  2423739 catgattattcagaaaatgattaatattgttgattttaatggtaaaatatgtatcatttattaaaacactcttattaa 2423662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 8115068 - 8115129
Alignment:
Q  180 aatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagtta 241  Q
    |||| ||||||||||| |||||||||||| || |||||||||| ||||||||||| ||||||    
T  8115068 aatgataaaattagtatcatttactaaaatactcttattaattttagttagtggattagtta 8115129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 277
Target Start/End: Complemental strand, 15046171 - 15046111
Alignment:
Q  216 attaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagt 277  Q
    ||||||||||||||||||||||||| |||||  ||||||||||||| ||||||| |||||||    
T  15046171 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataatagt 15046111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 28101379 - 28101448
Alignment:
Q  170 tgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagt 239  Q
    |||||||||||||| ||||||||||| ||||||||||||  || ||  ||||||||||||||| ||||||    
T  28101379 tgttgatttcaatgataaaattagtatcatttactaaaattcatttgataattgtagttagtgtagtagt 28101448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 157 - 261
Target Start/End: Complemental strand, 22398519 - 22398416
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattc 256  Q
    |||||||||||||||| ||||| |||| ||||||||  | |||| | |||  ||| ||||||||||||||||| || ||||||||||||   ||||||||    
T  22398519 aaatgattaattgtgtagattttaatgataaaattaaca-cattcattaagtcactcttattaattgtagttattgaagtagttaagttagatgaaattc 22398421  T
Q  257 aataa 261  Q
    |||||    
T  22398420 aataa 22398416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 234 - 329
Target Start/End: Original strand, 28106013 - 28106105
Alignment:
Q  234 agtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttga 329  Q
    |||||||||||||| ||||||||||||| ||| | | ||||||||| ||||| ||| || |  ||||||| ||||||||||||| |||||||||||    
T  28106013 agtagttaagttgaatgaaattcaataaataatgatataatagtggaaaaaattaa-aact--tgcattgttattgtaaagtgacaattattttga 28106105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 269
Target Start/End: Original strand, 13206896 - 13206951
Alignment:
Q  214 ttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggt 269  Q
    ||||||||||||||||||||||| ||||| |||| || |||||||||| |||||||    
T  13206896 ttattaattgtagttagtggagttgttaaattgagtgtaattcaataaataagggt 13206951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 208
Target Start/End: Original strand, 4581977 - 4582039
Alignment:
Q  146 gattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaa 208  Q
    |||| |||||||||| ||||  ||||||||||| ||||||||||||| || ||||||||||||    
T  4581977 gattcttatgaaaataattagctgtgttgattttaatggtaaaattaatatcatttactaaaa 4582039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 159 - 236
Target Start/End: Complemental strand, 1671792 - 1671715
Alignment:
Q  159 atgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagt 236  Q
    ||||||| ||| |||||||| |||| |||||| | |  || ||| |||||||||| ||||||||||||||||||||||    
T  1671792 atgattagttgcgttgattttaatgataaaatgaatttcaattattaaaacacacctattaattgtagttagtggagt 1671715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 109 - 246
Target Start/End: Complemental strand, 16431174 - 16431038
Alignment:
Q  109 tccatttcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaa 208  Q
    ||||||| | |||| || ||||||||| |||||||||||||   |  |||| ||||||| ||||||| || || ||||||||| ||  ||||||||||||    
T  16431174 tccattttaaaataatagtcgtttaagttttgtgcatgatttagaaaaaaa-gattaatagtgttgagtttaaaggtaaaatttgtgtcatttactaaaa 16431076  T
Q  209 cacacttattaattgtagttagtggagtagttaagttg 246  Q
     || ||||||| ||||||||  || |||| ||||||||    
T  16431075 tactcttattacttgtagtttatgaagtaattaagttg 16431038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 27367234 - 27367279
Alignment:
Q  285 aataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    ||||||||||| |||||||||||| |||||||| ||||||||||||    
T  27367234 aataataaatgatgcattggtattctaaagtgacaattattttgag 27367279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 27457581 - 27457626
Alignment:
Q  285 aataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    ||||||||||| |||||||||||| |||||||| ||||||||||||    
T  27457581 aataataaatgatgcattggtattctaaagtgacaattattttgag 27457626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 268
Target Start/End: Original strand, 4367295 - 4367371
Alignment:
Q  192 agtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaaggg 268  Q
    |||| ||||| |||||| |  |||||||| ||||||||||| |||||||||||||  ||||||| ||||| ||||||    
T  4367295 agtatcattttctaaaatatccttattaactgtagttagtgaagtagttaagttgcatgaaatttaataaataaggg 4367371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 4590610 - 4590656
Alignment:
Q  162 attaattgtgttgatttcaatggtaaaattagtagcatttactaaaa 208  Q
    ||||||||||||||||||||| ||||||||| || | ||||||||||    
T  4590610 attaattgtgttgatttcaatagtaaaattaatatcgtttactaaaa 4590656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 16406798 - 16406831
Alignment:
Q  162 attaattgtgttgatttcaatggtaaaattagta 195  Q
    |||||||||||||||||||||| |||||||||||    
T  16406798 attaattgtgttgatttcaatgataaaattagta 16406831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 330
Target Start/End: Original strand, 12307687 - 12307774
Alignment:
Q  242 agttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    |||||| ||||||||||||| ||||  | || |||| | ||||||||||||||| || |||  |||| |||||||| ||||||||||||    
T  12307687 agttgagtgaaattcaataaataagaatatattagttg-aaaaaataataaatgttgtattaatattttaaagtgacaattattttgag 12307774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 21425397 - 21425440
Alignment:
Q  198 atttactaaaacacacttattaattgtagttagtggagtagttaa 242  Q
    ||||||||||||||| ||||||||| |||||||||||||| ||||    
T  21425397 atttactaaaacaca-ttattaattatagttagtggagtacttaa 21425440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 255
Target Start/End: Original strand, 29444950 - 29445034
Alignment:
Q  171 gttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaatt 255  Q
    ||||||||||||| ||||||||||  | |||| ||| || | || |||||||| |||||||  ||||||||||| || |||||||    
T  29444950 gttgatttcaatgataaaattagtttcgtttattaataccccctgattaattggagttagttaagtagttaagtggaatgaaatt 29445034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 275
Target Start/End: Complemental strand, 33510251 - 33510129
Alignment:
Q  151 ttatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactg 250  Q
    |||| |||| || ||| ||||||||||| | || |||||||||||  ||||||||||| |   |||||||||||| ||| | ||||||||||||||  ||    
T  33510251 ttataaaaacgaataaatgtgttgatttta-tgataaaattagtat-atttactaaaatatttttattaattgtaattaattgagtagttaagttggatg 33510154  T
Q  251 aaattcaataagtaagggtgtaata 275  Q
    ||||| | ||| ||||||| |||||    
T  33510153 aaatttattaaataagggtataata 33510129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 100 - 330
Target Start/End: Complemental strand, 17199 - 16973
Alignment:
Q  100 attattccttccatttcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcat 199  Q
    |||| ||| ||||| | ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  17199 attactccatccatctaacaatattagtcgtttaaggtttgtgcatgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtagcat 17100  T
Q  200 ttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgc 299  Q
    ||| || ||||| |||||||||| |||||| ||| ||| ||| ||||| ||||||||||||| |||   | ||||||||| ||||||    |||||||||    
T  17099 ttattagaacacccttattaattatagttaatggcgtaattacgttgaatgaaattcaataaataaaattataatagtggaaaaaaa----aaatgctgc 17004  T
Q  300 attggtattgtaaagtgagaattattttgag 330  Q
    |||| |||| |||||||| ||||||||||||    
T  17003 attgatattataaagtgataattattttgag 16973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 115; Significance: 3e-58; HSPs: 2)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 115 - 329
Target Start/End: Complemental strand, 50353 - 50139
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| |||||||||||||||||| |||||||| | ||||||||||||||||| ||||||||| ||||||||||| ||||||||| || |   |    
T  50353 tcacaatattagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttaatttcaatgataaaattagtatcatttactataatatctt 50254  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaag 314  Q
    ||||||||  ||||||||||||| ||||||||| ||||||| ||||| ||||||| ||||||||  ||| ||||||||||||||||||| |||| |||||    
T  50253 tattaattacagttagtggagtaattaagttgaatgaaattaaataaataagggtataatagtgaaaaataataataaatgctgcattgatattctaaag 50154  T
Q  315 tgagaattattttga 329  Q
    ||| |||||||||||    
T  50153 tgacaattattttga 50139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 175 - 330
Target Start/End: Complemental strand, 22437 - 22282
Alignment:
Q  175 atttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaag-ttgactgaaattcaataagtaagggtgtaa 273  Q
    |||| |||| ||||||||||| |||||||||||| |   |||||||| || ||||||| |||||||||  |||  | ||||||||||| ||||| | |||    
T  22437 attttaatgctaaaattagtatcatttactaaaatatctttattaatcgtggttagtgcagtagttaaaattggataaaattcaataaataaggatataa 22338  T
Q  274 tagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    |||||  ||||||||||||||| || || ||||||||||||||| ||||||||||||    
T  22337 tagtga-aaaaaataataaatgttgtatcggtattgtaaagtgataattattttgag 22282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 162 - 381
Target Start/End: Original strand, 697 - 912
Alignment:
Q  162 attaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataa 261  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||  |||| |||  |||||||||||||    
T  697 attaattgtgttgatttcaatggtaaaattaatagcatttactaaaacacctttattgattgtagttagtggagtgtttaaattggatgaaattcaataa 796  T
Q  262 gtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttgagnnnnnnnnnnnntgctaaagagacaataatt 361  Q
     ||||||| ||||||| |||||||||| | |||| |||| |||||||||||||||| ||||||||||||            |||||||||||| ||||||    
T  797 ataagggtataatagt-ggaaaaaatattcaatgttgcaatggtattgtaaagtgacaattattttgag---gaaaaaaaatgctaaagagacgataatt 892  T
Q  362 gtgagacggagggagtataa 381  Q
    ||||||||||||||||||||    
T  893 gtgagacggagggagtataa 912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 128 - 286
Target Start/End: Complemental strand, 105820 - 105662
Alignment:
Q  128 cgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagt 227  Q
    |||||||| ||| ||||||||||||| | ||||||||||||||||| |||||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  105820 cgtttaagatttatgcatgattattaagtaaatgattaattgtgtttatttcaatggtaaaattaatagcgtttactaaaacacccttattaattgtagt 105721  T
Q  228 tagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaa 286  Q
    ||||| |||||||||||||| |||||||| |||| ||||||| ||||| ||||||||||    
T  105720 tagtgaagtagttaagttgaatgaaattcgataaataagggtataataatgggaaaaaa 105662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 127 - 330
Target Start/End: Complemental strand, 5527 - 5326
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||||| ||||||||||| |||||||||||| |||||||| |||||||||||||||| || |||||||||||| |  |||||||||| |||    
T  5527 tcgtttaaggtttgtacatgattattaagaaaatgattaactgtgttgaattcaatggtaaaattaatatcatttactaaaatatccttattaattttag 5428  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    ||||||||||||||||||||  ||||||||||||| ||| ||| | ||| | ||||||||||||||||| || ||||| ||| |||||| | ||||||||    
T  5427 ttagtggagtagttaagttggatgaaattcaataaataaaggtat-ataat-ggaaaaaataataaatgttgtattggcattctaaagtaacaattattt 5330  T
Q  327 tgag 330  Q
    ||||    
T  5329 tgag 5326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 127 - 330
Target Start/End: Original strand, 7959 - 8163
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||| ||||  |||| | |||||| | |||||||||||| |||||||||  |||||||||||| ||  |||||| ||||||| ||||||||||||||    
T  7959 tcgtttacggttgatgcacggttattaaggaaatgattaattttgttgatttggatggtaaaattaatattatttaccaaaacacccttattaattgtag 8058  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtggg-aaaaaataataaatgctgcattggtattgtaaagtgagaattatt 325  Q
    ||||||||||| ||||||||  |||| |||||||| ||||||| | ||| |||| |||||||||||||||||||||||||||| |||||||| |||||||    
T  8059 ttagtggagtaattaagttggatgaagttcaataaataagggtattataatgggaaaaaaataataaatgctgcattggtattctaaagtgacaattatt 8158  T
Q  326 ttgag 330  Q
    |||||    
T  8159 ttgag 8163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 115 - 329
Target Start/End: Original strand, 136003 - 136218
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| ||||||||| ||| |||| ||||||||   |||||||||||  ||||||||||||||||||||||| |||||||||||||||||| ||    
T  136003 tcacaatattagtcgtttaagatttatgcacgattattaaataaatgattaataatgttgatttcaatggtaaaattaatagcatttactaaaacaccct 136102  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaa-aaataataaatgctgcattggtattgtaaa 313  Q
    |||||||| ||||||||| ||||||||||||   ||||||| ||||| ||| ||| ||||||| | ||| ||| || ||||| || |||| ||| |||||    
T  136103 tattaattatagttagtgaagtagttaagtttgatgaaattaaataaataatggtataatagtagaaaagaaaaaaaaaatgttgtattgatatcgtaaa 136202  T
Q  314 gtgagaattattttga 329  Q
    |||| |||||||||||    
T  136203 gtgacaattattttga 136218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 115 - 267
Target Start/End: Complemental strand, 16247 - 16095
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacact 214  Q
    ||||||||||| | ||||||| ||||| || |||||||| | |||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||    
T  16247 tcacaatattagtagtttaagatttgttcacgattattaaggaaatgattaattgtgttgattttaatgataaaattaatagcatttactaaaacacact 16148  T
Q  215 tattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagg 267  Q
    ||||||||||||||| || || ||||||| ||  ||||||||||||| |||||    
T  16147 tattaattgtagttaatgaagcagttaagatggatgaaattcaataaataagg 16095  T

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Target: scaffold0583 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 127 - 327
Target Start/End: Complemental strand, 2162 - 1963
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||||||  |||| |||||||| | || |||||||||||||| ||||||||| |||||||| || ||||||||||||||  ||||||||||||||    
T  2162 tcgtttaaggttcatgcacgattattaaggaagtgattaattgtgttaatttcaatgataaaattaatatcatttactaaaacatccttattaattgtag 2063  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattt 326  Q
    |||||||| || |||  ||   ||||||||||||| ||||||| ||||| | || |||||||||||||||| ||||| | || |||||||| ||||||||    
T  2062 ttagtggattaattacattcgatgaaattcaataaataagggtataataat-ggtaaaaataataaatgcttcattgatgttttaaagtgataattattt 1964  T

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Target: scaffold0110 (Bit Score: 74; Significance: 8e-34; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 127 - 288
Target Start/End: Complemental strand, 1841 - 1680
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtag 226  Q
    ||||||||| ||| | || | |||||| |||||||||||||| |||||||||  ||||||||||||||| |||||||| |||||| | ||||||||||||    
T  1841 tcgtttaagatttatacacggttattaagaaaatgattaattatgttgattttgatggtaaaattagtatcatttacttaaacacccgtattaattgtag 1742  T
Q  227 ttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaata 288  Q
    | ||||||||||||||||||  | ||||||||||| ||||||| ||||| ||| ||| ||||    
T  1741 tcagtggagtagttaagttggattaaattcaataaataagggtataataatggaaaataata 1680  T

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Target: scaffold0110; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 346 - 379
Target Start/End: Complemental strand, 1474 - 1441
Alignment:
Q  346 taaagagacaataattgtgagacggagggagtat 379  Q
    |||||||||||| |||||||||||||||||||||    
T  1474 taaagagacaattattgtgagacggagggagtat 1441  T

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Target: scaffold0182 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 130 - 295
Target Start/End: Original strand, 20334 - 20500
Alignment:
Q  130 tttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtta 229  Q
    ||||||| ||||||| ||||||||   ||||||||||||||||||||||  || |||||||||||| |||||| ||||| || ||||||||||| |||||    
T  20334 tttaagggttgtgcaagattattaattaaatgattaattgtgttgattttgattgtaaaattagtatcatttagtaaaatacccttattaattgcagtta 20433  T
Q  230 gtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaa-taataaatg 295  Q
    ||| |||||||||||||  ||||||||||||| | ||||| |||||  || |||||| |||||||||    
T  20434 gtgaagtagttaagttggatgaaattcaataaatgagggtataataaaggaaaaaaattaataaatg 20500  T

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Target: scaffold0003 (Bit Score: 59; Significance: 7e-25; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 192 - 330
Target Start/End: Original strand, 252848 - 252984
Alignment:
Q  192 agtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataata 291  Q
    |||| |||||||||||| |   |||||||||||||| | ||||||||||||||||| ||||||||||||| |||| || ||||| ||  |||||||||||    
T  252848 agtatcatttactaaaatatcgttattaattgtagt-attggagtagttaagttgaatgaaattcaataaataagagtataataatga-aaaaaataata 252945  T
Q  292 aatgctgcattggtattgtaaagtgagaattattttgag 330  Q
    |||| |||||||||||| |||||||| |||| |||||||    
T  252946 aatgttgcattggtattataaagtgacaatttttttgag 252984  T

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Target: scaffold0003; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 39225 - 39127
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgta 225  Q
    ||||||||||||| ||||  ||||||| | ||||||||||||||||||||||  ||| | ||||||||| ||||||||||||||   ||||||||||||    
T  39225 tcgtttaaggtttttgcacaattattaaggaaatgattaattgtgttgattttgatgatgaaattagtatcatttactaaaacatcattattaattgta 39127  T

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Target: scaffold0003; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 195
Target Start/End: Original strand, 252507 - 252575
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagta 195  Q
    |||||||||||||| | ||||||||||   |||||||||||| ||||||||| ||||||||||||||||    
T  252507 tcgtttaaggtttgcgtatgattattaaagaaatgattaattatgttgattttaatggtaaaattagta 252575  T

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Target: scaffold0016 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 228 - 327
Target Start/End: Complemental strand, 76328 - 76229
Alignment:
Q  228 tagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattatttt 327  Q
    ||||||||||||||||||   ||||||||||||| ||||||| |||||||   |||||||||||||| |||||||| |||| || ||||| |||||||||    
T  76328 tagtggagtagttaagttagatgaaattcaataaataagggtataatagtcaaaaaaaataataaatactgcattgatattatagagtgacaattatttt 76229  T

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Target: scaffold1391 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold1391
Description:

Target: scaffold1391; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 130 - 229
Target Start/End: Original strand, 1798 - 1897
Alignment:
Q  130 tttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagtta 229  Q
    ||||| |||| |||| |||||||| |||||| |||||||||||||||||  || || |||||| || |||||||||||||||  ||||||||| ||||||    
T  1798 tttaaagtttatgcacgattattaagaaaataattaattgtgttgattttgatagtcaaattaatatcatttactaaaacacctttattaattatagtta 1897  T

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Target: scaffold0188 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 6872 - 6793
Alignment:
Q  129 gtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaa 208  Q
    ||||||||||||||| ||||| ||| | |||||||||||||| || ||||||||| |||||||||||  |||||||||||    
T  6872 gtttaaggtttgtgcgtgatttttaaggaaatgattaattgttttaatttcaatgataaaattagtattatttactaaaa 6793  T

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Target: scaffold0470 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 117 - 194
Target Start/End: Complemental strand, 1132 - 1055
Alignment:
Q  117 acaatattactcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagt 194  Q
    ||||||||| ||||||||| |||   || ||||||||  ||||||||||||| |||||||||||||||||||||||||    
T  1132 acaatattagtcgtttaagatttacacacgattattaaaaaaatgattaattatgttgatttcaatggtaaaattagt 1055  T

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Target: scaffold0011 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 156 - 287
Target Start/End: Original strand, 14177 - 14306
Alignment:
Q  156 aaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaatt 255  Q
    ||||||||||| ||||||||||| ||| |||||||||||| ||||||   ||      ||||||||| |||||| |||||||||||| ||   |||||||    
T  14177 aaaatgattaaatgtgttgattttaatcgtaaaattagtatcatttat--aattttttttattaattatagttaatggagtagttaaatttgatgaaatt 14274  T
Q  256 caataagtaagggtgtaatagtgggaaaaaat 287  Q
    |||||| ||| ||| |||||||| ||||||||    
T  14275 caataaataaaggtataatagtgagaaaaaat 14306  T

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Target: scaffold0464 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 6263 - 6341
Alignment:
Q  127 tcgtttaaggtttgtgcatgattattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttacta 205  Q
    |||||||| ||||||||| |||| |||   |||||||||||||||||||||  |||| ||||||||||| |||| ||||    
T  6263 tcgtttaaagtttgtgcacgatttttaacgaaatgattaattgtgttgattctaatgataaaattagtatcattcacta 6341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 330
Target Start/End: Complemental strand, 6090 - 5979
Alignment:
Q  212 acttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaatagtgggaaaaaataataaatgctgcattggtattgta 311  Q
    ||||||||||| || |||||||||||||||| |||  | ||||||||||||       ||| |||||  ||| |||||||||||||| |||| |||| ||    
T  6090 acttattaattatacttagtggagtagttaatttggataaaattcaataagg------gtattagtga-aaacaataataaatgctggattgatattcta 5998  T
Q  312 aagtgagaattattttgag 330  Q
    |||||| ||||||||||||    
T  5997 aagtgataattattttgag 5979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2146 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold2146
Description:

Target: scaffold2146; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 244
Target Start/End: Complemental strand, 494 - 425
Alignment:
Q  175 atttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagt 244  Q
    |||| |||| ||||||||||| |||| | |||||||| ||||||||| |||||||||||| || ||||||    
T  494 attttaatgttaaaattagtatcattcaataaaacacccttattaatagtagttagtggattaattaagt 425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 143937 - 143892
Alignment:
Q  157 aaatgattaattgtgttgatttcaatggtaaaattagtagcattta 202  Q
    |||| ||||||||||||||| ||||||||||||||||| |||||||    
T  143937 aaataattaattgtgttgatatcaatggtaaaattagttgcattta 143892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 84379 - 84417
Alignment:
Q  115 tcacaatattactcgtttaaggtttgtgcatgattatta 153  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  84379 tcacaatattagtcgtttaaggtttgtgcacgattatta 84417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 329
Target Start/End: Complemental strand, 42966 - 42813
Alignment:
Q  175 atttcaatggtaaaattagtagcatttactaaaacacacttattaattgtagttagtggagtagttaagttgactgaaattcaataagtaagggtgtaat 274  Q
    |||||||| ||||||||| ||   ||| ||||||||  |||||||||| || |||||| | || ||||||  | ||||||||||||| |||  || || |    
T  42966 atttcaatagtaaaattaatatattttgctaaaacattcttattaattataattagtgaaataattaagtgaagtgaaattcaataaataaatgtatatt 42867  T
Q  275 agtgggaaaaaataataaatgctgcattggtattgtaaagtgagaattattttga 329  Q
    || ||| |||||||| ||||| |||| || |||| |||||| | |||||||||||    
T  42866 agaggggaaaaataacaaatgttgca-tgatattttaaagtaacaattattttga 42813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 12114 - 12041
Alignment:
Q  148 ttattatgaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacacttattaat 221  Q
    |||||| | ||||||||| |  ||||||||| ||||| |||||  ||| ||||||||||||||| |||||||||    
T  12114 ttattaaggaaatgattactgatgttgattttaatggcaaaatgtgtatcatttactaaaacactcttattaat 12041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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