View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3002_high_121 (Length: 238)
Name: NF3002_high_121
Description: NF3002
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3002_high_121 |
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Alignment Details
Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 30761370 - 30761590
Alignment:
| Q |
1 |
caaattcaaaagggtcactttagggtctctcttcaatttgtttgcaactatggaggattcactggaaaatttgatttcttatatggtaaattaaatttca |
100 |
Q |
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| T |
30761370 |
caaattcaaaagggtcactttagggtctctcttcaatttgtttgcaactatggaggattcactggaaaatttgatttcttatatggtaaattaaatttca |
30761469 |
T |
|
| Q |
101 |
tagtacatacatgatttgccaatctttatatcattatttgttaattgatacannnnnnnnatctttgaattaactgtcataggaaatggaagatgatgtg |
200 |
Q |
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| T |
30761470 |
tagtacatacatgatttgctaatctttatatcattatttgttaattgatacattttttttatctttgaattaactgtcataggaaatggaagatgatgtg |
30761569 |
T |
|
| Q |
201 |
atcttgaatcaaagtagcacc |
221 |
Q |
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||||||||||||||||||||| |
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| T |
30761570 |
atcttgaatcaaagtagcacc |
30761590 |
T |
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