View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3002_high_25 (Length: 495)

Name: NF3002_high_25
Description: NF3002
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3002_high_25
NF3002_high_25
[»] chr4 (48 HSPs)
chr4 (278-482)||(20944274-20944487)
chr4 (327-482)||(20945382-20945546)
chr4 (330-453)||(54372796-54372919)
chr4 (324-453)||(49923708-49923837)
chr4 (321-452)||(37642484-37642616)
chr4 (324-452)||(21570367-21570495)
chr4 (324-453)||(54373895-54374024)
chr4 (324-453)||(31204598-31204727)
chr4 (330-453)||(17521863-17521987)
chr4 (324-453)||(21569294-21569423)
chr4 (330-452)||(5546966-5547085)
chr4 (273-453)||(31205652-31205832)
chr4 (381-452)||(17522503-17522574)
chr4 (324-433)||(47243954-47244062)
chr4 (378-441)||(5574304-5574367)
chr4 (325-433)||(47242997-47243104)
chr4 (321-433)||(47572627-47572738)
chr4 (321-433)||(50497036-50497147)
chr4 (322-433)||(43709838-43709948)
chr4 (329-453)||(49922556-49922680)
chr4 (378-441)||(5575465-5575528)
chr4 (324-365)||(93715-93756)
chr4 (324-369)||(25764648-25764693)
chr4 (324-369)||(27509949-27509994)
chr4 (324-369)||(32617265-32617310)
chr4 (321-433)||(43708877-43708988)
chr4 (321-397)||(44217614-44217690)
chr4 (329-404)||(4150609-4150684)
chr4 (324-360)||(19630872-19630908)
chr4 (317-431)||(5470111-5470226)
chr4 (324-417)||(5417348-5417440)
chr4 (324-417)||(11482840-11482933)
chr4 (324-365)||(11822883-11822924)
chr4 (324-369)||(19631047-19631092)
chr4 (324-365)||(23329919-23329960)
chr4 (324-365)||(23330099-23330140)
chr4 (324-365)||(25764471-25764512)
chr4 (324-404)||(26045176-26045255)
chr4 (324-365)||(26107699-26107740)
chr4 (324-365)||(36611091-36611132)
chr4 (324-369)||(36611268-36611313)
chr4 (324-369)||(39899222-39899267)
chr4 (324-369)||(51949585-51949630)
chr4 (324-365)||(55013791-55013832)
chr4 (160-204)||(5079218-5079262)
chr4 (280-308)||(23569497-23569525)
chr4 (324-360)||(39899407-39899443)
chr4 (329-404)||(42698653-42698728)
[»] chr8 (45 HSPs)
chr8 (330-453)||(11080975-11081098)
chr8 (324-433)||(9189438-9189546)
chr8 (376-453)||(44770557-44770634)
chr8 (321-433)||(9190406-9190517)
chr8 (324-433)||(16346143-16346251)
chr8 (324-439)||(12820056-12820170)
chr8 (324-433)||(4534078-4534186)
chr8 (324-453)||(41767107-41767236)
chr8 (324-369)||(162567-162612)
chr8 (330-403)||(42314809-42314882)
chr8 (334-433)||(4534993-4535091)
chr8 (34-86)||(11792209-11792261)
chr8 (324-360)||(35182074-35182110)
chr8 (378-454)||(35462765-35462841)
chr8 (376-433)||(20066174-20066231)
chr8 (324-397)||(43414425-43414498)
chr8 (324-433)||(43415931-43416040)
chr8 (324-369)||(1259723-1259768)
chr8 (324-369)||(3317648-3317693)
chr8 (324-369)||(3317768-3317813)
chr8 (324-369)||(3317942-3317987)
chr8 (324-369)||(4325703-4325748)
chr8 (324-369)||(4325938-4325983)
chr8 (324-369)||(5821958-5822003)
chr8 (324-369)||(5876511-5876556)
chr8 (324-369)||(5876719-5876764)
chr8 (324-369)||(5876800-5876845)
chr8 (324-369)||(5881515-5881560)
chr8 (324-365)||(6513277-6513318)
chr8 (324-369)||(9237421-9237466)
chr8 (324-369)||(9237629-9237674)
chr8 (324-369)||(11901459-11901504)
chr8 (324-369)||(12823346-12823391)
chr8 (324-369)||(14054897-14054942)
chr8 (324-365)||(21524565-21524606)
chr8 (324-365)||(21524625-21524666)
chr8 (325-417)||(22913237-22913328)
chr8 (324-369)||(23152589-23152634)
chr8 (324-369)||(29802300-29802345)
chr8 (324-369)||(35103328-35103373)
chr8 (324-369)||(41387456-41387501)
chr8 (324-369)||(45467486-45467531)
chr8 (324-369)||(45467773-45467818)
chr8 (325-365)||(1259903-1259943)
chr8 (324-356)||(12823592-12823624)
[»] scaffold0041 (3 HSPs)
scaffold0041 (324-454)||(1066-1196)
scaffold0041 (324-453)||(611-740)
scaffold0041 (324-433)||(85040-85148)
[»] chr1 (32 HSPs)
chr1 (324-453)||(40778416-40778545)
chr1 (324-453)||(49618475-49618604)
chr1 (330-443)||(38451661-38451774)
chr1 (334-443)||(40779596-40779705)
chr1 (330-453)||(52439228-52439351)
chr1 (324-453)||(49619761-49619891)
chr1 (376-453)||(40721881-40721957)
chr1 (328-439)||(9822699-9822809)
chr1 (376-452)||(18655543-18655619)
chr1 (324-433)||(30743131-30743239)
chr1 (324-433)||(43808485-43808593)
chr1 (376-453)||(18656642-18656719)
chr1 (321-433)||(43807476-43807587)
chr1 (328-405)||(52437956-52438033)
chr1 (94-142)||(460801-460849)
chr1 (330-453)||(40722976-40723099)
chr1 (378-441)||(51088634-51088697)
chr1 (324-386)||(38451596-38451658)
chr1 (324-369)||(13834995-13835040)
chr1 (324-360)||(17750451-17750487)
chr1 (321-365)||(48225126-48225170)
chr1 (164-202)||(52910122-52910160)
chr1 (324-369)||(7204211-7204256)
chr1 (324-369)||(13834820-13834865)
chr1 (324-369)||(13835055-13835100)
chr1 (324-369)||(17738570-17738615)
chr1 (324-369)||(17750235-17750280)
chr1 (325-454)||(45042654-45042783)
chr1 (325-365)||(10579583-10579623)
chr1 (160-204)||(11193541-11193585)
chr1 (324-360)||(17738363-17738399)
chr1 (160-224)||(19809052-19809116)
[»] chr5 (62 HSPs)
chr5 (321-453)||(30916061-30916193)
chr5 (330-453)||(33362510-33362633)
chr5 (324-453)||(14357825-14357954)
chr5 (324-452)||(42962067-42962195)
chr5 (328-452)||(38603694-38603818)
chr5 (276-416)||(9038457-9038597)
chr5 (330-440)||(42963171-42963281)
chr5 (321-396)||(30912355-30912430)
chr5 (324-418)||(39050732-39050826)
chr5 (328-433)||(4904252-4904355)
chr5 (324-433)||(11907125-11907233)
chr5 (324-369)||(24099995-24100040)
chr5 (385-452)||(25212975-25213042)
chr5 (385-452)||(25277127-25277194)
chr5 (321-433)||(38602703-38602816)
chr5 (324-433)||(5163704-5163813)
chr5 (330-452)||(14356482-14356603)
chr5 (376-454)||(30674772-30674850)
chr5 (324-369)||(1156013-1156058)
chr5 (324-369)||(10503916-10503961)
chr5 (324-365)||(14858483-14858524)
chr5 (376-417)||(18873362-18873403)
chr5 (155-204)||(20272572-20272621)
chr5 (321-433)||(24071407-24071518)
chr5 (324-365)||(36442269-36442310)
chr5 (325-433)||(39135612-39135719)
chr5 (99-143)||(4484031-4484075)
chr5 (324-360)||(9438346-9438382)
chr5 (321-369)||(20841878-20841926)
chr5 (398-453)||(30915615-30915670)
chr5 (324-433)||(23679191-23679299)
chr5 (324-433)||(23855513-23855621)
chr5 (324-369)||(1156073-1156118)
chr5 (324-369)||(1156248-1156293)
chr5 (324-369)||(4349604-4349649)
chr5 (324-365)||(6131973-6132014)
chr5 (324-369)||(6132150-6132195)
chr5 (324-365)||(6172249-6172290)
chr5 (324-369)||(8127581-8127626)
chr5 (324-369)||(9040792-9040837)
chr5 (324-369)||(9438521-9438566)
chr5 (324-369)||(10570287-10570332)
chr5 (324-369)||(10570347-10570392)
chr5 (324-369)||(13476916-13476961)
chr5 (324-365)||(20841822-20841863)
chr5 (324-369)||(22803317-22803362)
chr5 (324-365)||(22803498-22803539)
chr5 (325-358)||(24070450-24070483)
chr5 (324-369)||(29906100-29906145)
chr5 (324-369)||(31369861-31369906)
chr5 (324-369)||(37812340-37812385)
chr5 (324-369)||(37812515-37812560)
chr5 (328-416)||(39051652-39051740)
chr5 (324-369)||(42026392-42026437)
chr5 (324-365)||(42026572-42026613)
chr5 (324-369)||(42381311-42381356)
chr5 (324-369)||(42381901-42381946)
chr5 (324-365)||(42382081-42382122)
chr5 (324-365)||(43476166-43476207)
chr5 (324-369)||(43476342-43476387)
chr5 (377-453)||(1012000-1012076)
chr5 (325-369)||(1156308-1156352)
[»] chr6 (37 HSPs)
chr6 (172-274)||(4133833-4133940)
chr6 (7-70)||(4133766-4133829)
chr6 (324-453)||(13562239-13562368)
chr6 (330-451)||(682315-682436)
chr6 (324-453)||(683485-683612)
chr6 (324-433)||(1757458-1757566)
chr6 (324-440)||(10673653-10673769)
chr6 (328-452)||(13561326-13561450)
chr6 (324-439)||(25439064-25439179)
chr6 (328-433)||(11724260-11724364)
chr6 (321-369)||(6889006-6889054)
chr6 (324-369)||(10286269-10286314)
chr6 (381-433)||(1948819-1948871)
chr6 (324-433)||(27108138-27108246)
chr6 (324-433)||(27149935-27150043)
chr6 (328-365)||(1292842-1292879)
chr6 (328-432)||(1692122-1692224)
chr6 (324-365)||(7829401-7829442)
chr6 (324-369)||(8286360-8286405)
chr6 (324-369)||(8286420-8286465)
chr6 (324-369)||(8286595-8286640)
chr6 (324-369)||(8286654-8286699)
chr6 (324-369)||(8939171-8939216)
chr6 (324-365)||(12153474-12153515)
chr6 (324-369)||(18693540-18693585)
chr6 (324-369)||(18700481-18700526)
chr6 (324-369)||(19048384-19048429)
chr6 (327-427)||(25437830-25437929)
chr6 (324-369)||(26841570-26841615)
chr6 (160-201)||(29246431-29246472)
chr6 (324-369)||(30860029-30860074)
chr6 (324-369)||(31038666-31038711)
chr6 (324-365)||(32224133-32224174)
chr6 (324-356)||(26841524-26841556)
chr6 (329-404)||(27107230-27107304)
chr6 (329-404)||(27149036-27149110)
chr6 (321-369)||(29836054-29836102)
[»] chr3 (49 HSPs)
chr3 (330-453)||(48336397-48336520)
chr3 (330-454)||(8895206-8895330)
chr3 (330-453)||(14206724-14206846)
chr3 (330-453)||(14214472-14214594)
chr3 (332-453)||(48338060-48338181)
chr3 (327-453)||(27226482-27226608)
chr3 (324-453)||(50003166-50003295)
chr3 (324-405)||(50719699-50719781)
chr3 (324-405)||(50793067-50793149)
chr3 (324-439)||(5384465-5384580)
chr3 (324-417)||(2088886-2088978)
chr3 (378-452)||(44115535-44115609)
chr3 (324-433)||(45730681-45730789)
chr3 (324-453)||(50002457-50002586)
chr3 (321-433)||(53901610-53901721)
chr3 (378-454)||(2764028-2764104)
chr3 (349-439)||(5409407-5409497)
chr3 (378-441)||(44116637-44116700)
chr3 (378-452)||(2762887-2762961)
chr3 (328-433)||(27225481-27225586)
chr3 (324-405)||(14213176-14213257)
chr3 (325-433)||(39530840-39530947)
chr3 (325-433)||(39531780-39531887)
chr3 (328-433)||(50150769-50150873)
chr3 (321-369)||(40941527-40941575)
chr3 (108-201)||(21143734-21143820)
chr3 (324-369)||(1070117-1070162)
chr3 (36-85)||(2302065-2302114)
chr3 (324-369)||(7584003-7584048)
chr3 (324-365)||(12061733-12061774)
chr3 (324-369)||(17933933-17933978)
chr3 (324-369)||(18024881-18024926)
chr3 (324-369)||(18270736-18270781)
chr3 (324-365)||(18270885-18270926)
chr3 (324-369)||(19794504-19794549)
chr3 (324-365)||(22977089-22977130)
chr3 (324-369)||(23090520-23090565)
chr3 (324-369)||(28004375-28004420)
chr3 (324-369)||(28033152-28033197)
chr3 (324-369)||(30267500-30267545)
chr3 (324-369)||(30267675-30267720)
chr3 (325-358)||(33000838-33000871)
chr3 (324-369)||(40941766-40941811)
chr3 (324-369)||(42213260-42213305)
chr3 (324-365)||(42213440-42213481)
chr3 (329-428)||(5411207-5411306)
chr3 (330-453)||(21248200-21248323)
chr3 (324-360)||(28004560-28004596)
chr3 (325-439)||(46690251-46690365)
[»] chr7 (43 HSPs)
chr7 (324-452)||(22794266-22794394)
chr7 (321-453)||(47535700-47535832)
chr7 (321-452)||(29658558-29658688)
chr7 (328-453)||(4973992-4974117)
chr7 (328-453)||(32893505-32893630)
chr7 (324-452)||(47536794-47536922)
chr7 (327-453)||(40321116-40321242)
chr7 (324-453)||(29657033-29657163)
chr7 (324-433)||(40881135-40881243)
chr7 (324-453)||(4973557-4973686)
chr7 (324-453)||(23153573-23153702)
chr7 (330-448)||(32894745-32894863)
chr7 (324-452)||(36584849-36584977)
chr7 (330-452)||(35044669-35044792)
chr7 (330-433)||(35045857-35045960)
chr7 (324-433)||(33070649-33070757)
chr7 (324-417)||(47537020-47537112)
chr7 (330-433)||(16957369-16957472)
chr7 (378-454)||(24653609-24653685)
chr7 (324-433)||(43704415-43704524)
chr7 (376-453)||(40322178-40322255)
chr7 (376-453)||(42521201-42521278)
chr7 (324-404)||(46196900-46196980)
chr7 (7-86)||(26866621-26866701)
chr7 (326-433)||(29344210-29344316)
chr7 (321-369)||(36782901-36782949)
chr7 (367-439)||(43703141-43703212)
chr7 (375-433)||(25734831-25734888)
chr7 (324-365)||(8736032-8736073)
chr7 (324-369)||(19069708-19069753)
chr7 (324-369)||(23350964-23351009)
chr7 (324-369)||(23351024-23351069)
chr7 (324-369)||(23351084-23351129)
chr7 (324-365)||(24417389-24417430)
chr7 (376-433)||(29103273-29103330)
chr7 (324-369)||(36701644-36701689)
chr7 (324-369)||(38340837-38340882)
chr7 (376-453)||(42520317-42520394)
chr7 (99-151)||(5560718-5560770)
chr7 (334-433)||(37783611-37783709)
chr7 (325-369)||(39384062-39384106)
chr7 (325-369)||(45057591-45057635)
chr7 (325-369)||(45057825-45057869)
[»] chr2 (35 HSPs)
chr2 (330-453)||(12364240-12364363)
chr2 (324-453)||(20921554-20921684)
chr2 (321-453)||(371910-372042)
chr2 (329-433)||(38593080-38593184)
chr2 (329-433)||(38596676-38596780)
chr2 (351-453)||(12365961-12366061)
chr2 (325-433)||(20630635-20630742)
chr2 (376-440)||(40542331-40542395)
chr2 (324-453)||(10330750-10330878)
chr2 (376-452)||(370863-370939)
chr2 (328-433)||(33553329-33553433)
chr2 (321-450)||(38593993-38594122)
chr2 (321-450)||(38597589-38597718)
chr2 (324-433)||(30178589-30178697)
chr2 (324-365)||(6645630-6645671)
chr2 (324-369)||(6645775-6645820)
chr2 (324-369)||(7182459-7182504)
chr2 (324-369)||(10414242-10414287)
chr2 (324-369)||(10414302-10414347)
chr2 (324-369)||(15129783-15129828)
chr2 (324-369)||(15129958-15130003)
chr2 (324-365)||(23461355-23461396)
chr2 (324-365)||(26892573-26892614)
chr2 (324-369)||(26892749-26892794)
chr2 (324-365)||(26898012-26898053)
chr2 (324-365)||(27516268-27516309)
chr2 (324-369)||(27516445-27516490)
chr2 (324-369)||(35251781-35251826)
chr2 (324-369)||(36099433-36099478)
chr2 (324-369)||(36099608-36099653)
chr2 (324-365)||(38578121-38578162)
chr2 (324-369)||(39110121-39110166)
chr2 (324-369)||(45001337-45001382)
chr2 (325-369)||(18904914-18904958)
chr2 (325-365)||(35251606-35251646)
[»] scaffold1337 (1 HSPs)
scaffold1337 (329-454)||(281-407)
[»] scaffold0034 (2 HSPs)
scaffold0034 (332-406)||(98101-98175)
scaffold0034 (332-446)||(98631-98745)
[»] scaffold0065 (3 HSPs)
scaffold0065 (330-453)||(35413-35535)
scaffold0065 (374-453)||(36655-36731)
scaffold0065 (328-405)||(36737-36814)
[»] scaffold0295 (1 HSPs)
scaffold0295 (327-369)||(8120-8162)
[»] scaffold0352 (1 HSPs)
scaffold0352 (324-369)||(11328-11373)
[»] scaffold0180 (2 HSPs)
scaffold0180 (324-369)||(18415-18460)
scaffold0180 (325-369)||(18681-18725)
[»] scaffold0120 (1 HSPs)
scaffold0120 (324-365)||(27778-27819)
[»] scaffold0096 (1 HSPs)
scaffold0096 (324-365)||(4947-4988)
[»] scaffold0026 (1 HSPs)
scaffold0026 (324-365)||(99888-99929)
[»] scaffold0009 (1 HSPs)
scaffold0009 (376-433)||(204633-204690)
[»] scaffold0035 (1 HSPs)
scaffold0035 (377-453)||(21239-21315)


Alignment Details
Target: chr4 (Bit Score: 113; Significance: 5e-57; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 278 - 482
Target Start/End: Original strand, 20944274 - 20944487
Alignment:
Q  278 ttaattacatatttagtcctttaacttaattcnnnnnnncaagttagtcccttaactattaaacgtttcattttggtcctttatcttattttcatcattc 377  Q
    ||||||||||||||||||  ||||||||||||        |||||||||| ||||||||||||||||| ||||||||| ||||| ||||||| ||||||     
T  20944274 ttaattacatatttagtctcttaacttaattcttttttttaagttagtccattaactattaaacgttttattttggtcatttattttatttttatcattt 20944373  T
Q  378 aatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaatgaggtctattagatctaac---------ccaacacctaattta 468  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||         |||||||||||||||    
T  20944374 aatttggtcatatttcattaattttaacctcctaaaaaagaggatcgttggataaatgagatctattagatctaaccgtgtatcaccaacacctaattta 20944473  T
Q  469 ttttagtttgcttc 482  Q
    ||||||||||||||    
T  20944474 ttttagtttgcttc 20944487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 327 - 482
Target Start/End: Complemental strand, 20945546 - 20945382
Alignment:
Q  327 ccttaactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgtt 426  Q
    |||||||||||||||||||||||||||| |||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20945546 ccttaactattaaacgtttcattttggttctttctcttatttccatcattcaacttggtcctatttcattaattttaacctcctaaaaaagaggaccgtt 20945447  T
Q  427 ggataaatgaggtctattagatctaac---------ccaacacctaatttattttagtttgcttc 482  Q
    ||||||||||| |||||||||||||||         |||||||||||||||||||||||||||||    
T  20945446 ggataaatgagttctattagatctaactgtgtatcaccaacacctaatttattttagtttgcttc 20945382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 330 - 453
Target Start/End: Original strand, 54372796 - 54372919
Alignment:
Q  330 taactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttgga 429  Q
    ||||||||||||||| ||  ||||||||||||||| ||| ||||||||||||||||||||||| ||| ||||||||| || | |||||  ||||||||||    
T  54372796 taactattaaacgttccaaattggtcctttatcttctttccatcattcaatttggtcctattttattcattttaacccccaagaaaaggagaccgttgga 54372895  T
Q  430 taaatgaggtctattagatctaac 453  Q
    ||||||||||||||||||||||||    
T  54372896 taaatgaggtctattagatctaac 54372919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 324 - 453
Target Start/End: Complemental strand, 49923837 - 49923708
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggacc 423  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||| ||||||| ||| |||||||||  | | |||||  ||||    
T  49923837 gtcccttaactattaaacgtttcaaattggtcctttatcttcttttcatcattcaatttggccctattttatttattttaaccctcaagaaaaggagacc 49923738  T
Q  424 gttggataaatgaggtctattagatctaac 453  Q
    |||||||| ||||||||||| |||||||||    
T  49923737 gttggatagatgaggtctatcagatctaac 49923708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 321 - 452
Target Start/End: Complemental strand, 37642616 - 37642484
Alignment:
Q  321 ttagtcccttaactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcc-taaaaaagag 419  Q
    |||||||| ||||||||||||||||||   | |||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||  |||||||      
T  37642616 ttagtcccctaactattaaacgtttcaaaatagtcctttatcttctttccatcattcaatttggtcctatttcattcattttaacctccaaaaaaaagga 37642517  T
Q  420 gaccgttggataaatgaggtctattagatctaa 452  Q
    |||| ||||||||||||||| ||| ||||||||    
T  37642516 gaccattggataaatgaggtttatcagatctaa 37642484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 324 - 452
Target Start/End: Complemental strand, 21570495 - 21570367
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    ||||| |||||||||||||||||| ||||||| ||||||||  |||||||||| ||||||| |||||||| ||||||||||| |  || ||||||| |||    
T  21570495 gtcccctaactattaaacgtttcaatttggtcatttatctttgttttcatcat-caatttgatcctattttattaattttaaacctctcaaaaagaagac 21570397  T
Q  423 cgttggataaatgaggtctattagatctaa 452  Q
    ||||||||||| ||||||||| ||||||||    
T  21570396 cgttggataaaggaggtctatcagatctaa 21570367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 324 - 453
Target Start/End: Complemental strand, 54374024 - 54373895
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggacc 423  Q
    ||||| |||||||||||||||  |  ||||||||||||||| ||| ||||||||||||||||||||||| ||| ||||||||| || | |||||  ||||    
T  54374024 gtcccctaactattaaacgttctaaattggtcctttatcttctttccatcattcaatttggtcctattttattcattttaacccccaagaaaaggagacc 54373925  T
Q  424 gttggataaatgaggtctattagatctaac 453  Q
      |||||||||||||||||| |||||||||    
T  54373924 actggataaatgaggtctataagatctaac 54373895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 324 - 453
Target Start/End: Original strand, 31204598 - 31204727
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctt-attttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    ||||| ||||||||||||||||||   ||||| |||||||| ||||| ||||| |||||||||||||||| ||||||||||| ||||| ||||||| |||    
T  31204598 gtcccctaactattaaacgtttcaaaatggtcatttatctttattttaatcat-caatttggtcctattttattaattttaaactccttaaaaagaagac 31204696  T
Q  423 cgttggataaatgaggtctattagatctaac 453  Q
    ||||||||||| || ||| || |||||||||    
T  31204697 cgttggataaaggatgtccatcagatctaac 31204727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 330 - 453
Target Start/End: Original strand, 17521863 - 17521987
Alignment:
Q  330 taactattaaacgtttcattttggtcctttatct-tattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttgg 428  Q
    |||||||||||  |||||  |||||||||||| | | ||| ||||| |||||||||||||||||| | |||||||| | ||||||||||| |||| ||||    
T  17521863 taactattaaatttttcaagttggtcctttatatgtgtttccatcagtcaatttggtcctatttcgtcaattttaatcccctaaaaaagaagaccattgg 17521962  T
Q  429 ataaatgaggtctattagatctaac 453  Q
    |||||  |||||||| |||||||||    
T  17521963 ataaacaaggtctatgagatctaac 17521987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 453
Target Start/End: Original strand, 21569294 - 21569423
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    ||||| |||||||||||||||||| ||||||| ||||||||  |||||||||| | ||||  || ||||| ||||||||||| |  || ||||||| |||    
T  21569294 gtcccctaactattaaacgtttcaatttggtcatttatctttgttttcatcat-ctatttaatcatattttattaattttaaacctctcaaaaagaagac 21569392  T
Q  423 cgttggataaatgaggtctattagatctaac 453  Q
    ||||||||||| |||||| || |||||||||    
T  21569393 cgttggataaaggaggtccatcagatctaac 21569423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 452
Target Start/End: Original strand, 5546966 - 5547085
Alignment:
Q  330 taactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttgga 429  Q
    |||||||||||||| |||  ||||||||||||||| ||||||||||| ||||   |  ||||| ||| ||||||||  || |||||||  ||||||||||    
T  5546966 taactattaaacgtatcaaattggtcctttatcttcttttcatcatttaatt---taatattttattcattttaacacccaaaaaaaggagaccgttgga 5547062  T
Q  430 taaatgaggtctattagatctaa 452  Q
    ||||||| |||||| ||||||||    
T  5547063 taaatgacgtctatcagatctaa 5547085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 273 - 453
Target Start/End: Complemental strand, 31205832 - 31205652
Alignment:
Q  273 taggcttaattacatatttagtcctttaacttaattcnnnnnnncaagttagtcccttaactattaaacgtttcattttggtcctttatctta-ttttca 371  Q
    ||||||||||||  ||||| |||| ||||||||||||       | | || ||||| ||||||||||||||||||   ||||||||||||||  |||| |    
T  31205832 taggcttaattaattatttggtcccttaacttaattctttttttcgaattggtcccctaactattaaacgtttcaaaatggtcctttatctttgttttaa 31205733  T
Q  372 tcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaatgaggtctattagatctaac 453  Q
    | ||| ||||||||| ||||| ||||||||||| ||||| ||||||| |||  ||||||||| ||| || || |||||||||    
T  31205732 ttatt-aatttggtcatattttattaattttaaactccttaaaaagaagacatttggataaaggagatccatcagatctaac 31205652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 381 - 452
Target Start/End: Complemental strand, 17522574 - 17522503
Alignment:
Q  381 ttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaatgaggtctattagatctaa 452  Q
    ||||||||||||||| |||||||||||||||||| ||  |||||||||| ||| ||||||||| ||||||||    
T  17522574 ttggtcctatttcatcaattttaacctcctaaaacaggagaccgttggaaaaaggaggtctataagatctaa 17522503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 47244062 - 47243954
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    |||||||||||||||||| ||||| |||||||||| |||||  ||||| |||| | |||||||| ||||| |||||||||||   ||||||||||| |||    
T  47244062 gtcccttaactattaaacatttcaatttggtcctt-atctttgttttcgtcat-cgatttggtcatattttattaattttaaatccctaaaaaagaagac 47243965  T
Q  423 cgttggataaa 433  Q
    |||||||||||    
T  47243964 cgttggataaa 47243954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 441
Target Start/End: Original strand, 5574304 - 5574367
Alignment:
Q  378 aatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaatgaggtct 441  Q
    ||||| |||||||||| | |||||||| ||||||||||||| |||||||||||||| |||||||    
T  5574304 aatttagtcctatttcctcaattttaatctcctaaaaaagaagaccgttggataaaggaggtct 5574367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 433
Target Start/End: Original strand, 47242997 - 47243104
Alignment:
Q  325 tcccttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggacc 423  Q
    |||||||||||||||| |||| | ||||||| ||||||||  ||||| |||| | ||||||||| |||| |||||||||||   ||||||||||| ||||    
T  47242997 tcccttaactattaaatgttttaatttggtc-tttatctttgttttcgtcat-cgatttggtccaattttattaattttaaatccctaaaaaagaagacc 47243094  T
Q  424 gttggataaa 433  Q
    ||||||||||    
T  47243095 gttggataaa 47243104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 321 - 433
Target Start/End: Original strand, 47572627 - 47572738
Alignment:
Q  321 ttagtcccttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagag 419  Q
    |||||||||||||||||||| |||||| |||||||||| |||||  ||||| |  | | ||||||||| |||| |||||||||||   |||||||||||     
T  47572627 ttagtcccttaactattaaatgtttcaatttggtcctt-atctttgttttcgttgt-cgatttggtccaattttattaattttaaatccctaaaaaagaa 47572724  T
Q  420 gaccgttggataaa 433  Q
    ||||||||||||||    
T  47572725 gaccgttggataaa 47572738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 321 - 433
Target Start/End: Original strand, 50497036 - 50497147
Alignment:
Q  321 ttagtcccttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagag 419  Q
    ||||| |||||||||||||| |||| | |||||||||| |||||  ||||| |||| | ||||||||| |||| |||||||||||   |||||||||||     
T  50497036 ttagttccttaactattaaatgttttaatttggtcctt-atctttgttttcgtcat-cgatttggtccaattttattaattttaaatccctaaaaaagaa 50497133  T
Q  420 gaccgttggataaa 433  Q
    ||||||||||||||    
T  50497134 gaccgttggataaa 50497147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 433
Target Start/End: Complemental strand, 43709948 - 43709838
Alignment:
Q  322 tagtcccttaactattaaacgtttcattttggtcctttatc-ttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagagg 420  Q
    |||||||||||||||||||||||||| |||||| ||||||| || ||||| ||| || |||||| || |||| |||||||||||   || |||||| | |    
T  43709948 tagtcccttaactattaaacgtttcaatttggt-ctttatctttgttttcgtca-tcgatttggaccaattttattaattttaaatccccaaaaaacaag 43709851  T
Q  421 accgttggataaa 433  Q
    |||||||||||||    
T  43709850 accgttggataaa 43709838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 329 - 453
Target Start/End: Original strand, 49922556 - 49922680
Alignment:
Q  329 ttaactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttgg 428  Q
    |||| |||||||| |||||  |||||| |||||||| |||   ||||||||||||  ||||||| ||| |||||||||  | | ||||   |||||||||    
T  49922556 ttaattattaaacatttcaaattggtcttttatcttctttctgtcattcaatttgaccctattttattcattttaaccctcaagaaaatgagaccgttgg 49922655  T
Q  429 ataaatgaggtctattagatctaac 453  Q
    ||| ||||||||||| |||||||||    
T  49922656 atagatgaggtctatcagatctaac 49922680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 441
Target Start/End: Complemental strand, 5575528 - 5575465
Alignment:
Q  378 aatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaatgaggtct 441  Q
    ||||| |||||||||| | |||||||| ||||||||||||  |||||||||||||| |||||||    
T  5575528 aatttagtcctatttcgtcaattttaatctcctaaaaaaggagaccgttggataaaggaggtct 5575465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 93715 - 93756
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||||||||||||||||| ||||    
T  93715 gtcccttaactattaaaagtttcattttggtcctttaactta 93756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 25764693 - 25764648
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||||||    
T  25764693 gtcccttaactattaaaagtttcgttttggtcctttaacttatttt 25764648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 27509994 - 27509949
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||||||    
T  27509994 gtcccttaactattaaaagtttcgttttggtcctttaacttatttt 27509949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 32617265 - 32617310
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||||||    
T  32617265 gtcccttaactattaaaagtttcgttttggtcctttaacttatttt 32617310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 321 - 433
Target Start/End: Original strand, 43708877 - 43708988
Alignment:
Q  321 ttagtcccttaactattaaacgtttcattttggtcctttatc-ttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagag 419  Q
    ||||||| |||||||||||| |||||| |||||||| ||||| || ||||| ||| || ||||||||| | || |||||||||||   ||||||||| |     
T  43708877 ttagtccattaactattaaatgtttcaatttggtcc-ttatctttgttttcgtca-tcgatttggtccaaatttattaattttaaatccctaaaaaacaa 43708974  T
Q  420 gaccgttggataaa 433  Q
    ||||||||||||||    
T  43708975 gaccgttggataaa 43708988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 44217614 - 44217690
Alignment:
Q  321 ttagtcccttaactattaaacgtttcattttggtcctttatc-ttattttcatcattcaatttggtcctatttcatta 397  Q
    ||||| |||||| |||||||||||| | ||||||| |||||| || ||||||||| ||||||||||||||||| ||||    
T  44217614 ttagttccttaattattaaacgttttaatttggtcttttatctttgttttcatca-tcaatttggtcctattttatta 44217690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 404
Target Start/End: Original strand, 4150609 - 4150684
Alignment:
Q  329 ttaactattaaacgtttcattttggtcctttatc-ttattttcatcattcaatttggtcctatttcattaattttaa 404  Q
    ||||||||||||||||||| ||| ||| |||||| || ||||| ||| |||| |||||| |||||||||||||||||    
T  4150609 ttaactattaaacgtttcaatttagtcatttatctttgttttcctcaatcaa-ttggtcatatttcattaattttaa 4150684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 360
Target Start/End: Original strand, 19630872 - 19630908
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtccttta 360  Q
    ||||||||||||||||| |||||||||||||||||||    
T  19630872 gtcccttaactattaaaagtttcattttggtccttta 19630908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 431
Target Start/End: Complemental strand, 5470226 - 5470111
Alignment:
Q  317 caagttagtcccttaactattaaacgtttcattttggtcctttatct-tattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaa 415  Q
    |||||| |||||  ||||||||||  ||||| | ||||||||||| | | ||||||||  ||||||| ||| |||||  ||||||||||||  || ||||    
T  5470226 caagttggtcccaaaactattaaaattttcaatgtggtcctttatatatgttttcatccgtcaatttagtcttatttagttaattttaaccatctcaaaa 5470127  T
Q  416 agaggaccgttggata 431  Q
    ||| ||||||||||||    
T  5470126 agaagaccgttggata 5470111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 417
Target Start/End: Original strand, 5417348 - 5417440
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatc-ttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaag 417  Q
    ||||||||||||||||| |||||| |||| ||| ||||| || ||||| ||| ||||||||||| ||||| |||||||||||   ||||||||||    
T  5417348 gtcccttaactattaaatgtttcaatttgatcc-ttatctttgttttcgtca-tcaatttggtcatattttattaattttaaatccctaaaaaag 5417440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 417
Target Start/End: Original strand, 11482840 - 11482933
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctt-tatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaag 417  Q
    ||||||||||||||||| |||||| |||||||||| | | || ||||| ||| |||||||||||| |||| | |||||||||   ||||||||||    
T  11482840 gtcccttaactattaaatgtttcaatttggtccttatttttttttttcgtca-tcaatttggtccgattttagtaattttaaatccctaaaaaag 11482933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 11822924 - 11822883
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  11822924 gtcccttaactattaaaagtttcgttttggtcctttaactta 11822883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 19631092 - 19631047
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  19631092 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 19631047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 23329919 - 23329960
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  23329919 gtcccttaactattaaaagtttcgttttggtcctttaactta 23329960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 23330140 - 23330099
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  23330140 gtcccttaactattaaaagtttcgttttggtcctttaactta 23330099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 25764471 - 25764512
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  25764471 gtcccttaactattaaaagtttctttttggtcctttaactta 25764512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 404
Target Start/End: Original strand, 26045176 - 26045255
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatc-ttattttcatcattcaatttggtcctatttcattaattttaa 404  Q
    |||||||||||||||||||||||| ||| |||| ||||| || ||||| ||| || ||||||||| |||| |||||||||||    
T  26045176 gtcccttaactattaaacgtttcaatttagtcc-ttatctttgttttcgtca-tcgatttggtccaattttattaattttaa 26045255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 26107699 - 26107740
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  26107699 gtcccttaactattaaaagtttctttttggtcctttaactta 26107740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 36611091 - 36611132
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  36611091 gtcccttaactattaaaagtttcgttttggtcctttaactta 36611132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 36611313 - 36611268
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  36611313 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 36611268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 39899222 - 39899267
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  39899222 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 39899267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 51949630 - 51949585
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  51949630 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 51949585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 55013791 - 55013832
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  55013791 gtcccttaactattaaaagtttcgttttggtcctttaactta 55013832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 5079218 - 5079262
Alignment:
Q  160 taatgagttgtgacaccttgtaatatccattaaccatccactgaa 204  Q
    ||||||||||||| ||||||| ||||  |||||||||||||||||    
T  5079218 taatgagttgtgataccttgttatatttattaaccatccactgaa 5079262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 308
Target Start/End: Complemental strand, 23569525 - 23569497
Alignment:
Q  280 aattacatatttagtcctttaacttaatt 308  Q
    |||||||||||||||||||||||||||||    
T  23569525 aattacatatttagtcctttaacttaatt 23569497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 324 - 360
Target Start/End: Complemental strand, 39899443 - 39899407
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtccttta 360  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  39899443 gtcccttaactattaaaagtttcgttttggtccttta 39899407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 404
Target Start/End: Complemental strand, 42698728 - 42698653
Alignment:
Q  329 ttaactattaaacgtttcattttggtcctttatc-ttattttcatcattcaatttggtcctatttcattaattttaa 404  Q
    |||| |||||||||||||| ||||||| |||||| || ||||||||| ||||||| |||| |||| ||| |||||||    
T  42698728 ttaattattaaacgtttcaatttggtcatttatctttgttttcatca-tcaatttagtcccattttatttattttaa 42698653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 6e-35; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 330 - 453
Target Start/End: Complemental strand, 11081098 - 11080975
Alignment:
Q  330 taactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttgga 429  Q
    ||||||||||||||| ||  ||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||  |||||||  |||| |||||    
T  11081098 taactattaaacgttccaaattggtcctttatcttctttccatcattcaatttggtcctatttcattcattttaacctcaaaaaaaaggagacctttgga 11080999  T
Q  430 taaatgaggtctattagatctaac 453  Q
    |||||||||||||| |||||||||    
T  11080998 taaatgaggtctatcagatctaac 11080975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 9189438 - 9189546
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttattttca-tcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    |||||||||||||||||||||||| |||||||||| |||||  ||||  |||| |||||||||| ||||| |||||||||||   ||||||||||| |||    
T  9189438 gtcccttaactattaaacgtttcaatttggtcctt-atctttgtttctgtcat-caatttggtcatattttattaattttaaatccctaaaaaagaagac 9189535  T
Q  423 cgttggataaa 433  Q
    |||||||||||    
T  9189536 cgttggataaa 9189546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 376 - 453
Target Start/End: Complemental strand, 44770634 - 44770557
Alignment:
Q  376 tcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaatgaggtctattagatctaac 453  Q
    |||||||| |||||||| ||||||||||| | ||| ||||||| ||||||||||||||||||||||||  ||||||||    
T  44770634 tcaatttgatcctattttattaattttaaaccccttaaaaagaagaccgttggataaatgaggtctatcggatctaac 44770557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 433
Target Start/End: Complemental strand, 9190517 - 9190406
Alignment:
Q  321 ttagtcccttaactattaaacgtttcattttggtcctttatcttattttca-tcattcaatttggtcctatttcattaattttaacctcctaaaaaagag 419  Q
    |||||||||||||||||||| |||||| |||||||||| |||||  ||| | |||| | ||||||||| |||| |||||||||||   |||||||||||     
T  9190517 ttagtcccttaactattaaatgtttcaatttggtcctt-atctttgttttagtcat-cgatttggtccaattttattaattttaaatccctaaaaaagaa 9190420  T
Q  420 gaccgttggataaa 433  Q
    ||||||||||||||    
T  9190419 gaccgttggataaa 9190406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 16346143 - 16346251
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatc-ttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    |||||||||||||||||||||||| |||||||| ||||| || || || ||| || |||||||||||||| |||||||| ||   | ||||||||| |||    
T  16346143 gtcccttaactattaaacgtttcaatttggtcc-ttatctttgttatcgtca-tcgatttggtcctattttattaatttgaaatccataaaaaagaagac 16346240  T
Q  423 cgttggataaa 433  Q
    |||||||||||    
T  16346241 cgttggataaa 16346251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 439
Target Start/End: Complemental strand, 12820170 - 12820056
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    |||||||||||||||||||||| | |||||||||| |||||  ||||| || | | |||||||||||||| |||||||||||    || ||||||| |||    
T  12820170 gtcccttaactattaaacgttttaatttggtcctt-atctttgttttcgtcgt-cgatttggtcctattttattaattttaaatctctcaaaaagaagac 12820073  T
Q  423 cgttggataaatgaggt 439  Q
    ||||||||||| |||||    
T  12820072 cgttggataaaggaggt 12820056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 4534078 - 4534186
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    |||| |||| ||||||| |||||| |||||||||| |||||  ||||| |||| |||||||||||||||| |||||||||||   ||||||||||  |||    
T  4534078 gtcctttaaatattaaatgtttcaatttggtcctt-atctttgttttcgtcat-caatttggtcctattttattaattttaaatccctaaaaaagtagac 4534175  T
Q  423 cgttggataaa 433  Q
    | |||||||||    
T  4534176 cattggataaa 4534186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 453
Target Start/End: Complemental strand, 41767236 - 41767107
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctt-attttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    ||||| ||||||||||||||||||   |||||| ||||||| |||||  ||||| | ||||||||||||| ||||||||||| |  || ||||||| |||    
T  41767236 gtcccctaactattaaacgtttcaaaatggtcccttatctttattttagtcatt-attttggtcctattttattaattttaaacctcttaaaaagaagac 41767138  T
Q  423 cgttggataaatgaggtctattagatctaac 453  Q
     ||||||| || |||||| ||  ||||||||    
T  41767137 tgttggattaaggaggtccatcggatctaac 41767107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 162612 - 162567
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||||||    
T  162612 gtcccttaactattaaaagtttcgttttggtcctttaacttatttt 162567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 330 - 403
Target Start/End: Complemental strand, 42314882 - 42314809
Alignment:
Q  330 taactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaatttta 403  Q
    ||||||||||||||||||  ||||| ||||||||| ||| | |||||||||||||||  |||| ||| ||||||    
T  42314882 taactattaaacgtttcaaattggttctttatcttctttccttcattcaatttggtctcattttattcatttta 42314809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 433
Target Start/End: Complemental strand, 4535091 - 4534993
Alignment:
Q  334 tattaaacgtttcattttggtcctttatc-ttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataa 432  Q
    |||||||||||||| |||||||| ||||| || ||||| ||| |||||||| |||||||| |||||||| ||   | ||||||||| |||||||||||||    
T  4535091 tattaaacgtttcaatttggtcc-ttatctttgttttcgtca-tcaatttgatcctattttattaatttgaaatccataaaaaagaagaccgttggataa 4534994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 11792209 - 11792261
Alignment:
Q  34 atatatgatttataggtgttcaaatatacattatattcattaatcacaatttg 86  Q
    ||||||| |||  |||||||||||||||||| ||||||||| |||||||||||    
T  11792209 atatatgtttttcaggtgttcaaatatacatgatattcattgatcacaatttg 11792261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 360
Target Start/End: Complemental strand, 35182110 - 35182074
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtccttta 360  Q
    ||||||||||||||||| |||||||||||||||||||    
T  35182110 gtcccttaactattaaaagtttcattttggtccttta 35182074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 35462765 - 35462841
Alignment:
Q  378 aatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaatgaggtctattagatctaacc 454  Q
    |||||||||||||||  |||||||||||    | ||||||  |||||||||||||| ||||||||| ||||||||||    
T  35462765 aatttggtcctattttgttaattttaactcatttaaaaaggagaccgttggataaacgaggtctatcagatctaacc 35462841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 376 - 433
Target Start/End: Original strand, 20066174 - 20066231
Alignment:
Q  376 tcaatttggtcctatttcattaattttaacctcctaaaaaagag-gaccgttggataaa 433  Q
    |||||||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||    
T  20066174 tcaatttggtcctatttccttaattttaa-ctccttaaaaaaagagaccgttggataaa 20066231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 397
Target Start/End: Original strand, 43414425 - 43414498
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatct-tattttcatcattcaatttggtcctatttcatta 397  Q
    ||||| ||||||||||||||||||   ||||||||||||| | ||||||||| |||||||||| |||||| ||||    
T  43414425 gtcccctaactattaaacgtttcaaaatggtcctttatctatgttttcatca-tcaatttggtactattttatta 43414498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 43416040 - 43415931
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttattttca-tcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    ||||||||||||||||||||||||   ||||| ||||||||  ||| | |||| || ||| |||| |||| ||||||||||| | ||| ||||||| |||    
T  43416040 gtcccttaactattaaacgtttcaaaatggtcttttatctttgttttagtcat-cattttagtccgattttattaattttaaaccccttaaaaagaagac 43415942  T
Q  423 cgttggataaa 433  Q
     ||||||||||    
T  43415941 tgttggataaa 43415931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 1259723 - 1259768
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  1259723 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 1259768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 3317648 - 3317693
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  3317648 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 3317693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 3317768 - 3317813
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  3317768 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 3317813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 3317987 - 3317942
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| |||| |||||||| ||||||||    
T  3317987 gtcccttaactattaaaagtttcgtttttgtcctttaacttatttt 3317942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 4325703 - 4325748
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  4325703 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 4325748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 4325983 - 4325938
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  4325983 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 4325938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 5822003 - 5821958
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  5822003 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 5821958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 5876511 - 5876556
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  5876511 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 5876556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 5876764 - 5876719
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  5876764 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 5876719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 5876845 - 5876800
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  5876845 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 5876800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 5881515 - 5881560
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  5881515 gtcccttaactattaaaagtttcgttttggtccattaacttatttt 5881560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 6513277 - 6513318
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  6513277 gtcccttaactattaaaagtttcgttttggtcctttaactta 6513318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 9237421 - 9237466
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  9237421 gtcccttaactattaaaagtttcgttttggtccattaacttatttt 9237466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 9237674 - 9237629
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    |||||||||||| |||| ||||||||||||||| ||| ||||||||    
T  9237674 gtcccttaactactaaaagtttcattttggtcccttaacttatttt 9237629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 11901504 - 11901459
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  11901504 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 11901459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 12823346 - 12823391
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  12823346 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 12823391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 14054897 - 14054942
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  14054897 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 14054942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 21524606 - 21524565
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  21524606 gtcccttaactattaaaagtttcgttttggtcctttaactta 21524565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 21524666 - 21524625
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||    
T  21524666 gtcccttaactattaaaagtttcattttggtcccttaactta 21524625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 417
Target Start/End: Original strand, 22913237 - 22913328
Alignment:
Q  325 tcccttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaag 417  Q
    ||||||||||| |||| |||||| |||| ||||| |||||  ||||| |||| |||||||||||||||| |||||||||||   ||||||||||    
T  22913237 tcccttaactagtaaatgtttcaatttgatcctt-atctttgttttcgtcat-caatttggtcctattttattaattttaaatccctaaaaaag 22913328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 23152634 - 23152589
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  23152634 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 23152589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 29802300 - 29802345
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  29802300 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 29802345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 35103328 - 35103373
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  35103328 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 35103373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 41387501 - 41387456
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  41387501 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 41387456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 45467486 - 45467531
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  45467486 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 45467531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 45467818 - 45467773
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  45467818 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 45467773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 365
Target Start/End: Complemental strand, 1259943 - 1259903
Alignment:
Q  325 tcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    |||||||||||||||| ||||||||||||||| ||| ||||    
T  1259943 tcccttaactattaaaagtttcattttggtccattaactta 1259903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 324 - 356
Target Start/End: Complemental strand, 12823624 - 12823592
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcc 356  Q
    ||||||||||||||||| |||||||||||||||    
T  12823624 gtcccttaactattaaaagtttcattttggtcc 12823592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 75; Significance: 2e-34; HSPs: 3)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 324 - 454
Target Start/End: Complemental strand, 1196 - 1066
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggacc 423  Q
    ||||||||||  ||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||  ||||    
T  1196 gtcccttaaccgttaaatgtttcaatttggccctttatcttattttcatcattcaatttggtcctatttcatcaattttaacgtgctaaaaaaggagacc 1097  T
Q  424 gttggataaatgaggtctattagatctaacc 454  Q
    |||| |||||||| || ||| ||||||||||    
T  1096 gttgaataaatgaagtatatcagatctaacc 1066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 324 - 453
Target Start/End: Original strand, 611 - 740
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggacc 423  Q
    |||||||||  ||||||||||||| ||||||||||||| || ||| ||||||||||||||||||||||| || ||||||||     ||||||||  ||||    
T  611 gtcccttaatcattaaacgtttcaatttggtcctttatattgtttccatcattcaatttggtcctatttaatcaattttaatgggttaaaaaaggagacc 710  T
Q  424 gttggataaatgaggtctattagatctaac 453  Q
    ||||||||||| | || ||| |||||||||    
T  711 gttggataaataaagtatatcagatctaac 740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 85148 - 85040
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctt-attttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    |||||||||||||||| ||||||| |||||||||| ||||| |||||  |||| |||||||||| ||||| |||||||||||   ||||||||||| |||    
T  85148 gtcccttaactattaaccgtttcaatttggtcctt-atctttatttttgtcat-caatttggtcatattttattaattttaaatccctaaaaaagaagac 85051  T
Q  423 cgttggataaa 433  Q
    |||||||||||    
T  85050 cgttggataaa 85040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 6e-29; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 324 - 453
Target Start/End: Original strand, 40778416 - 40778545
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggacc 423  Q
    |||||||||||||||||||||  |  ||||| ||||||||| ||| | ||||||||||||||||||||| ||| |||||||||  | | |||||  ||||    
T  40778416 gtcccttaactattaaacgttctaaattggttctttatcttctttccttcattcaatttggtcctattttatttattttaaccctcaagaaaaggagacc 40778515  T
Q  424 gttggataaatgaggtctattagatctaac 453  Q
    ||||||||||||||||||||||||||||||    
T  40778516 gttggataaatgaggtctattagatctaac 40778545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 324 - 453
Target Start/End: Original strand, 49618475 - 49618604
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggacc 423  Q
    ||||| |||||||||||||||| |  |||||  |||||||| ||| ||||||||||||||||| ||||| ||| ||||||||| || |||||||  ||||    
T  49618475 gtcccctaactattaaacgttttaaattggtgttttatcttctttccatcattcaatttggtcatattttattcattttaacccccaaaaaaaggagacc 49618574  T
Q  424 gttggataaatgaggtctattagatctaac 453  Q
    |||||||||||||||||||| |||||||||    
T  49618575 gttggataaatgaggtctatcagatctaac 49618604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 38451774 - 38451661
Alignment:
Q  330 taactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttgga 429  Q
    |||||||||||||||  |  ||||||||| ||||| ||||||||||||||||||||| ||||| ||| |||||||| |||||||||||  || |||||||    
T  38451774 taactattaaacgttctaaattggtccttcatcttcttttcatcattcaatttggtcatattttattcattttaacatcctaaaaaaggagatcgttgga 38451675  T
Q  430 taaatgaggtctat 443  Q
    ||||||| ||||||    
T  38451674 taaatgaagtctat 38451661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 334 - 443
Target Start/End: Complemental strand, 40779705 - 40779596
Alignment:
Q  334 tattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaa 433  Q
    |||||||||||| |  |||||| |||||||||||||||| |||||| |||||||||||| ||| ||||||||| || |||||||  |||||||||||||     
T  40779705 tattaaacgttttaaattggtcatttatcttattttcattattcaagttggtcctattttattcattttaacccccaaaaaaaggagaccgttggataag 40779606  T
Q  434 tgaggtctat 443  Q
    ||||||||||    
T  40779605 tgaggtctat 40779596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 330 - 453
Target Start/End: Complemental strand, 52439351 - 52439228
Alignment:
Q  330 taactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttgga 429  Q
    ||||||||||||||||||  ||| ||||||||||| ||| |||||||||||||||| |||||| ||| ||||||||  ||  ||||||  || |||||||    
T  52439351 taactattaaacgtttcaaattgatcctttatcttctttccatcattcaatttggttctattttattcattttaacacccataaaaaggagatcgttgga 52439252  T
Q  430 taaatgaggtctattagatctaac 453  Q
    ||||||| |||||| |||||||||    
T  52439251 taaatgaagtctatcagatctaac 52439228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 453
Target Start/End: Complemental strand, 49619891 - 49619761
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcc-tatttcattaattttaacctcctaaaaaagaggac 422  Q
    ||||| ||||||||||||||| ||  ||||||||||||||| ||| |||||||||||||||||| | ||| ||| |||||||||    |||||||  |||    
T  49619891 gtcccctaactattaaacgttccaaattggtcctttatcttctttccatcattcaatttggtcctttttttattcattttaaccctaaaaaaaaggagac 49619792  T
Q  423 cgttggataaatgaggtctattagatctaac 453  Q
    | || |||||||||||||||| |||| ||||    
T  49619791 cattagataaatgaggtctatcagatttaac 49619761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 376 - 453
Target Start/End: Original strand, 40721881 - 40721957
Alignment:
Q  376 tcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaatgaggtctattagatctaac 453  Q
    |||||||||||||||||| ||||||||||| ||||||||| || || ||||||||||| |||||| ||||||| ||||    
T  40721881 tcaatttggtcctatttcgttaattttaacttcctaaaaagga-gatcgttggataaaggaggtccattagatttaac 40721957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 328 - 439
Target Start/End: Original strand, 9822699 - 9822809
Alignment:
Q  328 cttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgtt 426  Q
    |||||||||||||||||||| |||||||||| |||||  ||||| ||||| | |||||| |||||| |||||||||||   ||||||||||| ||| |||    
T  9822699 cttaactattaaacgtttcaatttggtcctt-atctttgttttcgtcattga-tttggttctattttattaattttaaatccctaaaaaagaagactgtt 9822796  T
Q  427 ggataaatgaggt 439  Q
    ||||||| |||||    
T  9822797 ggataaaggaggt 9822809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 376 - 452
Target Start/End: Original strand, 18655543 - 18655619
Alignment:
Q  376 tcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaatgaggtctattagatctaa 452  Q
    ||||||| ||||| ||| |||||||||||  |||| ||||||| |||||||||||||| |||||| |||||||||||    
T  18655543 tcaatttagtccttttttattaattttaaaatccttaaaaagaagaccgttggataaaggaggtccattagatctaa 18655619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 30743131 - 30743239
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatc-ttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    ||||||||||||||||| |||||| |||||||| ||||| || ||||| ||| || ||||||||| |||| |||||||||||   ||||||||| | |||    
T  30743131 gtcccttaactattaaatgtttcaatttggtcc-ttatctttgttttcgtca-tcgatttggtccaattttattaattttaaatccctaaaaaacaagac 30743228  T
Q  423 cgttggataaa 433  Q
    |||||||||||    
T  30743229 cgttggataaa 30743239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 43808593 - 43808485
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    |||||||||||||||||||||||| ||||||| || |||||  ||||| |||| | |||||||| ||||| |||||||||||   ||||||||||| |||    
T  43808593 gtcccttaactattaaacgtttcaatttggtcatt-atctttgttttcgtcat-cgatttggtcatattttattaattttaaatccctaaaaaagaagac 43808496  T
Q  423 cgttggataaa 433  Q
    |||| ||||||    
T  43808495 cgttagataaa 43808485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 453
Target Start/End: Complemental strand, 18656719 - 18656642
Alignment:
Q  376 tcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaatgaggtctattagatctaac 453  Q
    |||||||| |||||||| ||||||||||| ||||| ||||||| ||| |||||||||| |||||| ||  ||||||||    
T  18656719 tcaatttgatcctattttattaattttaaactccttaaaaagaagactgttggataaaggaggtccatcggatctaac 18656642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 321 - 433
Target Start/End: Original strand, 43807476 - 43807587
Alignment:
Q  321 ttagtcccttaactattaaacgtttcattttggtcctttatc-ttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagag 419  Q
    ||||||| |||||||||||| |||||| |||||||| ||||| || ||||||||| || ||||| ||| |||| |||||| ||||   |||||||||||     
T  43807476 ttagtccattaactattaaatgtttcaatttggtcc-ttatctttgttttcatca-tcgatttgatccaattttattaatattaaatccctaaaaaagaa 43807573  T
Q  420 gaccgttggataaa 433  Q
    ||||||||||||||    
T  43807574 gaccgttggataaa 43807587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 405
Target Start/End: Original strand, 52437956 - 52438033
Alignment:
Q  328 cttaactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaac 405  Q
    ||||||||||||| |||| |  |||||| |||||||| ||| ||||||| ||||||||||||||| ||| ||||||||    
T  52437956 cttaactattaaatgttttaaattggtcatttatcttctttacatcatttaatttggtcctattttatttattttaac 52438033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 460801 - 460849
Alignment:
Q  94 acctaaaaattgttgttaatgacgttcaaaattgtggttaattgtgttc 142  Q
    ||||||||||||| ||||||||| ||||||||| |||||||||||||||    
T  460801 acctaaaaattgtggttaatgacattcaaaattttggttaattgtgttc 460849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 453
Target Start/End: Complemental strand, 40723099 - 40722976
Alignment:
Q  330 taactattaaacgtttcattttggtcctttatcttattttca-tcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttgg 428  Q
    ||||| ||||| |||||| ||||||||||||| | || | || ||| ||||||||||||||||||||||||||||||  |||||||||   ||| ||| |    
T  40723099 taacttttaaaagtttcaatttggtcctttatat-atgtgcaatcagtcaatttggtcctatttcattaattttaactccctaaaaaaagagactgttag 40723001  T
Q  429 ataaatgaggtctattagatctaac 453  Q
    ||||| |||||| || |||| ||||    
T  40723000 ataaaggaggtccatcagatttaac 40722976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 441
Target Start/End: Original strand, 51088634 - 51088697
Alignment:
Q  378 aatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaatgaggtct 441  Q
    ||||| |||||||||| | |||||||| ||||||||||||  |||||||||||||| |||||||    
T  51088634 aatttagtcctatttcgtcaattttaatctcctaaaaaaggagaccgttggataaaggaggtct 51088697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 386
Target Start/End: Original strand, 38451596 - 38451658
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtc 386  Q
    ||||| ||||||||||||||| ||  ||||| ||||||||| ||| |||||||||||||||||    
T  38451596 gtcccctaactattaaacgttccaaattggtactttatcttctttccatcattcaatttggtc 38451658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 13835040 - 13834995
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||||||    
T  13835040 gtcccttaactattaaaagtttcattttggtcccttaacttatttt 13834995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 360
Target Start/End: Complemental strand, 17750487 - 17750451
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtccttta 360  Q
    ||||||||||||||||| |||||||||||||||||||    
T  17750487 gtcccttaactattaaaagtttcattttggtccttta 17750451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 365
Target Start/End: Original strand, 48225126 - 48225170
Alignment:
Q  321 ttagtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    |||||||||||||||||||| ||||| ||||||||||||| ||||    
T  48225126 ttagtcccttaactattaaaagtttcgttttggtcctttaactta 48225170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 202
Target Start/End: Original strand, 52910122 - 52910160
Alignment:
Q  164 gagttgtgacaccttgtaatatccattaaccatccactg 202  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  52910122 gagttgtgacatcttgtaatattcattaaccatccactg 52910160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 7204256 - 7204211
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  7204256 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 7204211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 13834820 - 13834865
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  13834820 gtcccttaactattaaaagtttccttttggtcccttaacttatttt 13834865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 13835100 - 13835055
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  13835100 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 13835055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 17738615 - 17738570
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  17738615 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 17738570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 17750235 - 17750280
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  17750235 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 17750280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 454
Target Start/End: Original strand, 45042654 - 45042783
Alignment:
Q  325 tcccttaactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccg 424  Q
    |||||||||| ||||| ||||||  |||||| |||||||   |||  | | | ||||||||| |||||  |||||||||||    | ||||||  |||||    
T  45042654 tcccttaactgttaaatgtttcaaattggtcttttatctatgttttgttagtaaatttggtcatattttgttaattttaactcatttaaaaaggagaccg 45042753  T
Q  425 ttggataaatgaggtctattagatctaacc 454  Q
    ||||||||||||||| ||| ||||||||||    
T  45042754 ttggataaatgaggtatatcagatctaacc 45042783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 365
Target Start/End: Complemental strand, 10579623 - 10579583
Alignment:
Q  325 tcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    |||||||||||||||| ||||| ||||||||||||| ||||    
T  10579623 tcccttaactattaaaagtttcgttttggtcctttaactta 10579583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 11193541 - 11193585
Alignment:
Q  160 taatgagttgtgacaccttgtaatatccattaaccatccactgaa 204  Q
    ||||||||||||| ||||||| |||||||||| ||||||| ||||    
T  11193541 taatgagttgtgataccttgttatatccattagccatccattgaa 11193585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 324 - 360
Target Start/End: Original strand, 17738363 - 17738399
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtccttta 360  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  17738363 gtcccttaactattaaaagtttcgttttggtccttta 17738399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 19809052 - 19809116
Alignment:
Q  160 taatgagttgtgacaccttgtaatatccattaaccatccactgaaagtcattagccatgtatttg 224  Q
    ||||||||||| ||||||||| |||| |||||| |||| ||| || || |||| |||||||||||    
T  19809052 taatgagttgtaacaccttgttatattcattaatcatctactaaatgtaattaaccatgtatttg 19809116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 321 - 453
Target Start/End: Complemental strand, 30916193 - 30916061
Alignment:
Q  321 ttagtcccttaactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagagg 420  Q
    |||||||| |||||||||||||||  |   ||||| |||||||| ||| ||||||||||||||||| ||||||||| |||||||||||| |||||||  |    
T  30916193 ttagtcccctaactattaaacgttctaaagtggtcttttatcttctttccatcattcaatttggtcatatttcattcattttaacctccaaaaaaaggag 30916094  T
Q  421 accgttggataaatgaggtctattagatctaac 453  Q
    ||| |||||||||| |||||||| |||||||||    
T  30916093 accattggataaattaggtctatcagatctaac 30916061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 330 - 453
Target Start/End: Complemental strand, 33362633 - 33362510
Alignment:
Q  330 taactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctc-ctaaaaaagaggaccgttgg 428  Q
    |||||||||||| |||||  ||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||   |||||||  |||| ||||    
T  33362633 taactattaaac-tttcaaattggtcctttatcttctttccatcattcaatttggtcctatttcattcattttaacctcaaaaaaaaaggagaccattgg 33362535  T
Q  429 ataaatgaggtctattagatctaac 453  Q
    ||||||||||||||| |||||||||    
T  33362534 ataaatgaggtctatcagatctaac 33362510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 324 - 453
Target Start/End: Complemental strand, 14357954 - 14357825
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggacc 423  Q
    ||||| ||||||||||||| | ||  | |||| |||||||| ||| ||||||||||||||||||||||| ||||||||||||| || |||||||  ||||    
T  14357954 gtcccctaactattaaacgctccaaatcggtcatttatcttctttccatcattcaatttggtcctattttattaattttaacccccaaaaaaaggagacc 14357855  T
Q  424 gttggataaatgaggtctattagatctaac 453  Q
    |||||||||||||| ||||| | |||||||    
T  14357854 gttggataaatgagatctatcatatctaac 14357825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 324 - 452
Target Start/End: Original strand, 42962067 - 42962195
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    ||||| ||||||||||||| || |  |||||||||||||||  |||||||||| |||||||||||||||| ||||||||||| |  || ||||||| |||    
T  42962067 gtcccctaactattaaacgctttaaattggtcctttatctttgttttcatcat-caatttggtcctattttattaattttaaacctctcaaaaagaagac 42962165  T
Q  423 cgttggataaatgaggtctattagatctaa 452  Q
    ||||||||||| ||||||||| ||||||||    
T  42962166 cgttggataaaggaggtctataagatctaa 42962195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 328 - 452
Target Start/End: Complemental strand, 38603818 - 38603694
Alignment:
Q  328 cttaactattaaacgtttcattttggtcctttatcttattttca-tcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgtt 426  Q
    |||||||||||||| |||||   ||||||||||||||  ||| | |||| |||||||||||||||| ||||||||||| ||||||||||||| |||||||    
T  38603818 cttaactattaaacttttcaaaatggtcctttatctttgttttagtcat-caatttggtcctattttattaattttaaactcctaaaaaagaagaccgtt 38603720  T
Q  427 ggataaatgaggtctattagatctaa 452  Q
    |||||||  ||||| || ||||||||    
T  38603719 ggataaagaaggtccatcagatctaa 38603694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 276 - 416
Target Start/End: Original strand, 9038457 - 9038597
Alignment:
Q  276 gcttaattacatatttagtcctttaacttaattcnnnnnnncaagttagtcccttaactattaaacgtttcattttggtcctttatcttattttcatcat 375  Q
    ||||||||||| ||||| || |||||||||||||        || || ||||||||| |||||||| ||||| ||| ||| |||||||| ||| ||| ||    
T  9038457 gcttaattacacatttaatcttttaacttaattcttttttttaaattggtcccttaattattaaacatttcaatttagtcttttatcttgtttccataat 9038556  T
Q  376 tcaatttggtcctatttcattaattttaacctcctaaaaaa 416  Q
    ||||||||||||||||||||||  | ||||||| |||||||    
T  9038557 tcaatttggtcctatttcattagatctaacctcttaaaaaa 9038597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 330 - 440
Target Start/End: Complemental strand, 42963281 - 42963171
Alignment:
Q  330 taactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttgg 428  Q
    |||||||||||||||||| ||||||| ||||||||  |||||||||| ||||||  |||||||| ||||||||||| |  || ||||||| |||||||||    
T  42963281 taactattaaacgtttcaatttggtcatttatctttgttttcatcat-caatttaatcctattttattaattttaaacctctcaaaaagatgaccgttgg 42963183  T
Q  429 ataaatgaggtc 440  Q
    ||||| ||||||    
T  42963182 ataaaggaggtc 42963171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 396
Target Start/End: Original strand, 30912355 - 30912430
Alignment:
Q  321 ttagtcccttaactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcatt 396  Q
    |||||||  ||||||||||||||| ||   | |||||||||||| ||| |||||||||||||||||||||||||||    
T  30912355 ttagtcctctaactattaaacgttccaaagtagtcctttatcttctttacatcattcaatttggtcctatttcatt 30912430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 418
Target Start/End: Original strand, 39050732 - 39050826
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatc-ttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaaga 418  Q
    ||||||||||||||||||||||||   |||||||||||| |||||||  ||| | ||||||||| ||||| ||||||||||| ||||| |||||||    
T  39050732 gtcccttaactattaaacgtttcaaaatggtcctttatctttattttagtca-taaatttggtcatattttattaattttaaactcctcaaaaaga 39050826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 328 - 433
Target Start/End: Original strand, 4904252 - 4904355
Alignment:
Q  328 cttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgtt 426  Q
    |||||||||||||||||||| |||| ||||| |||||  |||||||||| | |||||||| ||||| |||||||||||  | |||||||||| |||||||    
T  4904252 cttaactattaaacgtttcaatttg-tcctt-atctttgttttcatcat-cgatttggtcatattttattaattttaaatttctaaaaaagaagaccgtt 4904348  T
Q  427 ggataaa 433  Q
    |||||||    
T  4904349 ggataaa 4904355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 11907233 - 11907125
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatc-ttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    ||||||||||||||||| |||||| |||||||| ||||| || ||||| ||| ||||||||||| ||||| |||||||||||   ||||||||||  |||    
T  11907233 gtcccttaactattaaatgtttcaatttggtcc-ttatctttgttttcgtca-tcaatttggtcatattttattaattttaaatccctaaaaaagtagac 11907136  T
Q  423 cgttggataaa 433  Q
    | |||||||||    
T  11907135 cattggataaa 11907125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 24099995 - 24100040
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||    
T  24099995 gtcccttaactattaaaagtttcattttggtcctttaacttatttt 24100040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 452
Target Start/End: Complemental strand, 25213042 - 25212975
Alignment:
Q  385 tcctatttcattaattttaacctcctaaaaaagaggaccgttggataaatgaggtctattagatctaa 452  Q
    ||||||||| | |||||||| ||||||||||||| |||||||||||||| ||||| | | ||||||||    
T  25213042 tcctatttcgtcaattttaatctcctaaaaaagaagaccgttggataaaggaggtttgtgagatctaa 25212975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 452
Target Start/End: Complemental strand, 25277194 - 25277127
Alignment:
Q  385 tcctatttcattaattttaacctcctaaaaaagaggaccgttggataaatgaggtctattagatctaa 452  Q
    ||||||||| | |||||||| ||||||||||||| |||||||||||||| ||||| | | ||||||||    
T  25277194 tcctatttcgtcaattttaatctcctaaaaaagaagaccgttggataaaggaggtttgtgagatctaa 25277127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 321 - 433
Target Start/End: Original strand, 38602703 - 38602816
Alignment:
Q  321 ttagtcccttaactattaaacgtttcattttggtcctttatctt--attttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaaga 418  Q
    |||| |||||||||||||||||||| |   ||||||| ||||||  |||||  ||||  ||||||||| ||||| ||||||||||| ||||| |||||||    
T  38602703 ttagccccttaactattaaacgttttaaaatggtcctctatcttttattttagtcata-aatttggtcatattttattaattttaaactcctcaaaaaga 38602801  T
Q  419 ggaccgttggataaa 433  Q
     ||| ||||||||||    
T  38602802 agacagttggataaa 38602816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 5163704 - 5163813
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    ||||| ||||||||||| ||||||   || |||||||||||  |||| || || |||||||||| ||||| ||||||||||| ||||| ||||| | |||    
T  5163704 gtcccctaactattaaatgtttcaaaatgatcctttatctttgttttaattat-caatttggtcatattttattaattttaaactccttaaaaataagac 5163802  T
Q  423 cgttggataaa 433  Q
    |||||||||||    
T  5163803 cgttggataaa 5163813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 452
Target Start/End: Original strand, 14356482 - 14356603
Alignment:
Q  330 taactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttgga 429  Q
    ||||||||||| |||  |  |||||| |||||||| ||| |||||||||||||| |||||||| ||| ||||||| |||  ||||||   |||| |||||    
T  14356482 taactattaaatgttctaaattggtcgtttatcttctttccatcattcaatttgatcctattttattcattttaa-ctcaaaaaaaaagagaccattgga 14356580  T
Q  430 taaatgaggtctattagatctaa 452  Q
    | |||||||||||| | ||||||    
T  14356581 tgaatgaggtctatcacatctaa 14356603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 454
Target Start/End: Complemental strand, 30674850 - 30674772
Alignment:
Q  376 tcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaatgaggtctattagatctaacc 454  Q
    ||||||| |||||||||  | |||||||| ||||||||||||  |||||||| ||||| ||||||| | ||||||||||    
T  30674850 tcaatttagtcctattttgtcaattttaatctcctaaaaaaggagaccgttgaataaaggaggtctgtaagatctaacc 30674772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 1156013 - 1156058
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||||||    
T  1156013 gtcccttaactattaaaagtttcattttggtcccttaacttatttt 1156058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 10503961 - 10503916
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||||||    
T  10503961 gtcccttaactattaaaagtttcattttggtcccttaacttatttt 10503916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 14858524 - 14858483
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||||||||| ||||||||||||| ||||    
T  14858524 gtcccttaactattaaacgtttcgttttggtcctttaactta 14858483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 376 - 417
Target Start/End: Complemental strand, 18873403 - 18873362
Alignment:
Q  376 tcaatttggtcctatttcattaattttaacctcctaaaaaag 417  Q
    ||||||||||||||||||||| |||||||||||| |||||||    
T  18873403 tcaatttggtcctatttcattcattttaacctccaaaaaaag 18873362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 20272572 - 20272621
Alignment:
Q  155 acgagtaatgagttgtgacaccttgtaatatccattaaccatccactgaa 204  Q
    |||| ||||||||||||| ||||||| |||||||||| ||||||||||||    
T  20272572 acgactaatgagttgtgataccttgttatatccattagccatccactgaa 20272621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 321 - 433
Target Start/End: Complemental strand, 24071518 - 24071407
Alignment:
Q  321 ttagtcccttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagag 419  Q
    ||||| |||||| ||||||| |||||| |||||||||| |||||  ||||| |||| || |||||||| |||| |||||||||||   ||||||||| |     
T  24071518 ttagttccttaattattaaatgtttcaatttggtcctt-atctttgttttcgtcatcca-tttggtccaattttattaattttaaatccctaaaaaacaa 24071421  T
Q  420 gaccgttggataaa 433  Q
    ||||||||||||||    
T  24071420 gaccgttggataaa 24071407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 36442269 - 36442310
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||||||||||||||||| ||||    
T  36442269 gtcccttaactattaaaagtttcattttggtcctttaactta 36442310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 433
Target Start/End: Complemental strand, 39135719 - 39135612
Alignment:
Q  325 tcccttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggacc 423  Q
    |||||||||||||||| |||||| ||||||| || |||||  ||||| |||| |||||||||||||||| |||||||||||   || |||||||  ||||    
T  39135719 tcccttaactattaaatgtttcaatttggtcatt-atctttgttttcctcat-caatttggtcctattttattaattttaaatccccaaaaaagtagacc 39135622  T
Q  424 gttggataaa 433  Q
     |||||||||    
T  39135621 attggataaa 39135612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 4484075 - 4484031
Alignment:
Q  99 aaaattgttgttaatgacgttcaaaattgtggttaattgtgttca 143  Q
    ||||| ||||||||||||||||||||||| | |||||||||||||    
T  4484075 aaaatcgttgttaatgacgttcaaaattgcgattaattgtgttca 4484031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 360
Target Start/End: Original strand, 9438346 - 9438382
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtccttta 360  Q
    ||||||||||||||||| |||||||||||||||||||    
T  9438346 gtcccttaactattaaaagtttcattttggtccttta 9438382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 369
Target Start/End: Complemental strand, 20841926 - 20841878
Alignment:
Q  321 ttagtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    |||||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  20841926 ttagtcccttaactattaaaagtttcgttttggtcccttaacttatttt 20841878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 453
Target Start/End: Original strand, 30915615 - 30915670
Alignment:
Q  398 attttaacctcctaaaaaagaggaccgttggataaatgaggtctattagatctaac 453  Q
    |||||||||||| |||||||  |||| ||||||| ||||||||||| |||||||||    
T  30915615 attttaacctccaaaaaaaggagaccattggatatatgaggtctatcagatctaac 30915670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 23679191 - 23679299
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatc-ttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    |||||||||||||||||||||||| ||| || | ||||| |||||||| ||| || ||||| |||||||| |||||| ||||   ||| ||||| | |||    
T  23679191 gtcccttaactattaaacgtttcaatttagttc-ttatctttattttcgtca-tcgatttgatcctattttattaatattaaatccctcaaaaaaaagac 23679288  T
Q  423 cgttggataaa 433  Q
    |||||||||||    
T  23679289 cgttggataaa 23679299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 23855621 - 23855513
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatc-ttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    |||||||||||||||||||||||| ||| || | ||||| |||||||| ||| || ||||| |||||||| |||||| ||||   ||| ||||| | |||    
T  23855621 gtcccttaactattaaacgtttcaatttagttc-ttatctttattttcgtca-tcgatttgatcctattttattaatattaaatccctcaaaaaaaagac 23855524  T
Q  423 cgttggataaa 433  Q
    |||||||||||    
T  23855523 cgttggataaa 23855513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 1156073 - 1156118
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  1156073 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 1156118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 1156293 - 1156248
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  1156293 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 1156248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 4349604 - 4349649
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  4349604 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 4349649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 6131973 - 6132014
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  6131973 gtcccttaactattaaaagtttctttttggtcctttaactta 6132014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 6132195 - 6132150
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  6132195 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 6132150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 6172290 - 6172249
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  6172290 gtcccttaactattaaaagtttcgttttggtcctttaactta 6172249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 8127581 - 8127626
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  8127581 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 8127626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 9040792 - 9040837
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  9040792 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 9040837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 9438566 - 9438521
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  9438566 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 9438521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 10570332 - 10570287
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  10570332 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 10570287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 10570392 - 10570347
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  10570392 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 10570347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 13476961 - 13476916
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  13476961 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 13476916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 20841863 - 20841822
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  20841863 gtcccttaactattaaaagtttcgttttggtcctttaactta 20841822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 22803317 - 22803362
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  22803317 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 22803362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 22803539 - 22803498
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  22803539 gtcccttaactattaaaagtttctttttggtcctttaactta 22803498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 358
Target Start/End: Original strand, 24070450 - 24070483
Alignment:
Q  325 tcccttaactattaaacgtttcattttggtcctt 358  Q
    ||||||||||||||||||||||| ||||||||||    
T  24070450 tcccttaactattaaacgtttcaatttggtcctt 24070483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 29906100 - 29906145
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  29906100 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 29906145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 31369906 - 31369861
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  31369906 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 31369861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 37812340 - 37812385
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  37812340 gtcccttaactattaaaagtttccttttggtcccttaacttatttt 37812385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 37812560 - 37812515
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  37812560 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 37812515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 416
Target Start/End: Complemental strand, 39051740 - 39051652
Alignment:
Q  328 cttaactattaaacgtttcattttggtcctttatcttattttca-tcattcaatttggtcctatttcattaattttaacctcctaaaaaa 416  Q
    ||||||||||||| ||||||   ||||||||||||||  ||| | |||| ||||||| |||||||| ||||||||||| ||||| |||||    
T  39051740 cttaactattaaatgtttcaaaatggtcctttatctttgttttagtcat-caatttgatcctattttattaattttaaactcctcaaaaa 39051652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 42026392 - 42026437
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  42026392 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 42026437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 42026613 - 42026572
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| |||||||||| |||||||| ||||    
T  42026613 gtcccttaactattaaaagtttcattttcgtcctttaactta 42026572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 42381311 - 42381356
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||||||||||||| ||  ||||||||    
T  42381311 gtcccttaactattaaaagtttcattttggtcccttgacttatttt 42381356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 42381901 - 42381946
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  42381901 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 42381946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 42382122 - 42382081
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  42382122 gtcccttaactattaaaagtttcgttttggtcctttaactta 42382081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 43476166 - 43476207
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  43476166 gtcccttaactattaaaagtttcgttttggtcctttaactta 43476207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 43476387 - 43476342
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  43476387 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 43476342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 377 - 453
Target Start/End: Complemental strand, 1012076 - 1012000
Alignment:
Q  377 caatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaatgaggtctattagatctaac 453  Q
    ||||||||||| |||| || |||||||| |   ||||||||| ||||||| |||||| ||||||||  |||||||||    
T  1012076 caatttggtccaatttaatcaattttaatcctataaaaaagaagaccgtttgataaaggaggtctacgagatctaac 1012000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 369
Target Start/End: Complemental strand, 1156352 - 1156308
Alignment:
Q  325 tcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    |||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  1156352 tcccttaactattaaaagtttcgttttggtcccttaacttatttt 1156308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 9e-28; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 172 - 274
Target Start/End: Original strand, 4133833 - 4133940
Alignment:
Q  172 acaccttgtaatatccattaaccatccactgaaagtcattagccatgt-----atttgttgtagatattatacggcctacatattagtagaccattaata 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||| |||||||||| |||| || |||| ||| ||||    
T  4133833 acaccttgtaatatccattaaccatccactgaaagtcattagccatgtatttaatttgttgtagatactatacggcctgcatagtactagaacataaata 4133932  T
Q  267 aaatttta 274  Q
    ||||||||    
T  4133933 aaatttta 4133940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 4133766 - 4133829
Alignment:
Q  7 ctattaatcatccaaatgtgttcaactatatatgatttataggtgttcaaatatacattatatt 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4133766 ctattaatcatccaaatgtgttcaactatatatgatttataggtgttaaaatatacattatatt 4133829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 324 - 453
Target Start/End: Complemental strand, 13562368 - 13562239
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctt-attttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    ||||||||||||||||||||||||   |||||||||||||| |||||  ||||  ||||||||||||||| ||||||||||| ||||||||||||| |||    
T  13562368 gtcccttaactattaaacgtttcaaaatggtcctttatctttattttagtcata-aatttggtcctattttattaattttaaactcctaaaaaagaagac 13562270  T
Q  423 cgttggataaatgaggtctattagatctaac 453  Q
     |||||||||| ||| || || |||||||||    
T  13562269 tgttggataaaggagatccatcagatctaac 13562239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 330 - 451
Target Start/End: Original strand, 682315 - 682436
Alignment:
Q  330 taactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttgga 429  Q
    ||||||||||||||| ||  |||||| |||||||| ||| ||||||||||||||||| ||||| ||| ||||||| |  | |||||||  ||||||||||    
T  682315 taactattaaacgttccaaattggtcatttatcttctttccatcattcaatttggtcttattttattcattttaatccacaaaaaaaggagaccgttgga 682414  T
Q  430 taaatgaggtctattagatcta 451  Q
    |||||||||||||| |||||||    
T  682415 taaatgaggtctatcagatcta 682436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 324 - 453
Target Start/End: Complemental strand, 683612 - 683485
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggacc 423  Q
    ||||| || |||||||||||||||  |||||| |||||||| ||| | |||||||||||||||| |||| ||| |||||||  ||| ||||||   ||||    
T  683612 gtcccctacctattaaacgtttcaaattggtcttttatcttctttccttcattcaatttggtcccattttattcattttaa--tccaaaaaaaagagacc 683515  T
Q  424 gttggataaatgaggtctattagatctaac 453  Q
    |||| ||||||||||||||| |||||||||    
T  683514 gttgaataaatgaggtctatcagatctaac 683485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 1757566 - 1757458
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    |||||||||||||||||||||||| |||||||||| |||||  ||||| || | | |||||||||||||| |||||||||||   ||| ||||||| |||    
T  1757566 gtcccttaactattaaacgtttcaatttggtcctt-atctttgttttcgtcgt-cgatttggtcctattttattaattttaaatccctcaaaaagaagac 1757469  T
Q  423 cgttggataaa 433  Q
    |||||||||||    
T  1757468 cgttggataaa 1757458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 324 - 440
Target Start/End: Original strand, 10673653 - 10673769
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttat-cttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    |||||||||||| ||||||||||| |||||||||||||  || ||||| ||| ||||||| ||||||||| ||||||||||| |   | ||||||| |||    
T  10673653 gtcccttaactaataaacgtttcaatttggtcctttatgtttgttttcgtca-tcaatttagtcctattttattaattttaaacctttcaaaaagaagac 10673751  T
Q  423 cgttggataaatgaggtc 440  Q
    ||||| ||||| ||||||    
T  10673752 cgttgaataaaggaggtc 10673769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 452
Target Start/End: Original strand, 13561326 - 13561450
Alignment:
Q  328 cttaactattaaacgtttcattttggtcctttatcttattttca-tcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgtt 426  Q
    ||||||||||||||||||||   ||||| ||||||||  ||  | |||| |||||||||||||||| ||||||||||| ||||| ||||||| || ||||    
T  13561326 cttaactattaaacgtttcaaaatggtcttttatctttgttatagtcat-caatttggtcctattttattaattttaaactcctcaaaaagaagatcgtt 13561424  T
Q  427 ggataaatgaggtctattagatctaa 452  Q
    |||||||  ||||| || ||||||||    
T  13561425 ggataaagaaggtccatcagatctaa 13561450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 439
Target Start/End: Complemental strand, 25439179 - 25439064
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    |||| |||| ||| |||||||||| ||||||| ||||||||  ||||||| || ||||||||||| |||| ||||||||||| |  || ||||||| |||    
T  25439179 gtcctttaattataaaacgtttcaatttggtcttttatctttgttttcattat-caatttggtccaattttattaattttaaacctcttaaaaagaagac 25439081  T
Q  423 cgttggataaatgaggt 439  Q
    ||||||||||| |||||    
T  25439080 cgttggataaaggaggt 25439064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 328 - 433
Target Start/End: Complemental strand, 11724364 - 11724260
Alignment:
Q  328 cttaactattaaacgtttcattttggtcctttatc-ttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgtt 426  Q
    |||||||||||||||||||| |||||||| ||||| || ||||| ||| |||||||| || ||||| ||| |||||||   ||||||||||| |||||||    
T  11724364 cttaactattaaacgtttcaatttggtcc-ttatctttgttttcgtca-tcaatttgatcatattttattgattttaaatccctaaaaaagaagaccgtt 11724267  T
Q  427 ggataaa 433  Q
    |||||||    
T  11724266 ggataaa 11724260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 369
Target Start/End: Complemental strand, 6889054 - 6889006
Alignment:
Q  321 ttagtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    |||||||||||||||||||| ||||||||||||||| ||| ||||||||    
T  6889054 ttagtcccttaactattaaaagtttcattttggtcccttaacttatttt 6889006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 10286269 - 10286314
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||||||    
T  10286269 gtcccttaactattaaaagtttcattttggtcccttaacttatttt 10286314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 433
Target Start/End: Original strand, 1948819 - 1948871
Alignment:
Q  381 ttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaa 433  Q
    |||||||||| ||||||||| ||| || |||||||||| ||||||||||||||    
T  1948819 ttggtcctatgtcattaattctaatctactaaaaaagaagaccgttggataaa 1948871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 27108246 - 27108138
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatc-ttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    |||||||||||||||||||||| | ||||| || ||||| || ||||||||| || |||| ||||||||| |||||||| ||   | ||||||||| ||     
T  27108246 gtcccttaactattaaacgttttaatttggacc-ttatctttgttttcatca-tcgatttagtcctattttattaatttgaaatccataaaaaagaagat 27108149  T
Q  423 cgttggataaa 433  Q
    |||||||||||    
T  27108148 cgttggataaa 27108138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 27150043 - 27149935
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatc-ttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    |||||||||||||||||||||| | ||||| || ||||| || ||||||||| || |||| ||||||||| |||||||| ||   | ||||||||| ||     
T  27150043 gtcccttaactattaaacgttttaatttggacc-ttatctttgttttcatca-tcgatttagtcctattttattaatttgaaatccataaaaaagaagat 27149946  T
Q  423 cgttggataaa 433  Q
    |||||||||||    
T  27149945 cgttggataaa 27149935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 365
Target Start/End: Complemental strand, 1292879 - 1292842
Alignment:
Q  328 cttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  1292879 cttaactattaaaagtttcattttggtcctttaactta 1292842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 432
Target Start/End: Original strand, 1692122 - 1692224
Alignment:
Q  328 cttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgtt 426  Q
    ||||||||||||| |||||| ||| ||| ||||||||  ||||| |||| |||||||||||||||| |||||||||||   ||||||||||  |||| ||    
T  1692122 cttaactattaaatgtttcaatttagtc-tttatctttgttttcgtcat-caatttggtcctattt-attaattttaaatccctaaaaaagtagaccatt 1692218  T
Q  427 ggataa 432  Q
    ||||||    
T  1692219 ggataa 1692224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 7829442 - 7829401
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  7829442 gtcccttaactattaaaagtttcgttttggtcctttaactta 7829401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 8286360 - 8286405
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  8286360 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 8286405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 8286420 - 8286465
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  8286420 gtcccttaactattaaaagtttcgttttggtccattaacttatttt 8286465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 8286640 - 8286595
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  8286640 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 8286595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 8286699 - 8286654
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  8286699 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 8286654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 8939216 - 8939171
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  8939216 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 8939171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 12153515 - 12153474
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  12153515 gtcccttaactattaaaagtttctttttggtcctttaactta 12153474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 18693585 - 18693540
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  18693585 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 18693540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 18700481 - 18700526
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  18700481 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 18700526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 19048384 - 19048429
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  19048384 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 19048429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 427
Target Start/End: Original strand, 25437830 - 25437929
Alignment:
Q  327 ccttaactattaaacgtttcattttggtcctttatc-ttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgt 425  Q
    ||||||||||||||||||||| |||||| ||||||| || |||||  || ||||| || |||||||| ||||||||||| |  || ||||||| ||||||    
T  25437830 ccttaactattaaacgtttcaatttggt-ctttatctttgttttcgcca-tcaatctgatcctattttattaattttaaacatctcaaaaagaagaccgt 25437927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 26841615 - 26841570
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  26841615 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 26841570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 29246431 - 29246472
Alignment:
Q  160 taatgagttgtgacaccttgtaatatccattaaccatccact 201  Q
    |||||||||| |||||||||| |||| |||||||||||||||    
T  29246431 taatgagttgcgacaccttgttatattcattaaccatccact 29246472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 30860029 - 30860074
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  30860029 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 30860074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 31038711 - 31038666
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  31038711 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 31038666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 32224174 - 32224133
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  32224174 gtcccttaactattaaaagtttcgttttggtcctttaactta 32224133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 324 - 356
Target Start/End: Complemental strand, 26841556 - 26841524
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcc 356  Q
    ||||||||||||||||| |||||||||||||||    
T  26841556 gtcccttaactattaaaagtttcattttggtcc 26841524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 404
Target Start/End: Original strand, 27107230 - 27107304
Alignment:
Q  329 ttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaa 404  Q
    ||||||||||||  ||||| |||||||||| |||||  ||||| |||| |||||||||||||||| |||||||||||    
T  27107230 ttaactattaaatatttcaatttggtcctt-atctttgttttcgtcat-caatttggtcctattttattaattttaa 27107304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 404
Target Start/End: Original strand, 27149036 - 27149110
Alignment:
Q  329 ttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaa 404  Q
    ||||||||||||  ||||| |||||||||| |||||  ||||| |||| |||||||||||||||| |||||||||||    
T  27149036 ttaactattaaatatttcaatttggtcctt-atctttgttttcgtcat-caatttggtcctattttattaattttaa 27149110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 321 - 369
Target Start/End: Complemental strand, 29836102 - 29836054
Alignment:
Q  321 ttagtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||| |||| ||||| ||||||||| ||| ||||||||    
T  29836102 ttagtcccttaactactaaaagtttcgttttggtccattaacttatttt 29836054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 9e-28; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 330 - 453
Target Start/End: Original strand, 48336397 - 48336520
Alignment:
Q  330 taactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttgga 429  Q
    ||||||||||||||| ||  ||| || |||||||| ||| ||||||||||||||||||||||| ||| ||||||||| || | |||||  ||||||||||    
T  48336397 taactattaaacgttccaaattgatcatttatcttctttccatcattcaatttggtcctattttattcattttaacccccaagaaaaggagaccgttgga 48336496  T
Q  430 taaatgaggtctattagatctaac 453  Q
    |||||||||| |||||||||||||    
T  48336497 taaatgaggtttattagatctaac 48336520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 330 - 454
Target Start/End: Original strand, 8895206 - 8895330
Alignment:
Q  330 taactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttgga 429  Q
    |||||| ||||||||||| ||||||| ||| | || ||| | ||||||||||||||||||||||||||||||||||| ||||||||||  || | | |||    
T  8895206 taactactaaacgtttcaatttggtcatttttattgtttccttcattcaatttggtcctatttcattaattttaaccccctaaaaaaggagatcatcgga 8895305  T
Q  430 taaatgaggtctattagatctaacc 454  Q
    ||||| |||||||| ||||||||||    
T  8895306 taaattaggtctatcagatctaacc 8895330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 330 - 453
Target Start/End: Complemental strand, 14206846 - 14206724
Alignment:
Q  330 taactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcc-taaaaaagaggaccgttgg 428  Q
    |||||||||||||||| |  |||||| |||||||| ||| ||||||||||||||||||||||| ||| |||||||| ||| |||||| |||   ||||||    
T  14206846 taactattaaacgttttaaattggtcatttatcttctttccatcattcaatttggtcctattttattcattttaacatccataaaaatgag--acgttgg 14206749  T
Q  429 ataaatgaggtctattagatctaac 453  Q
    ||||||||||||||| |||||||||    
T  14206748 ataaatgaggtctatcagatctaac 14206724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 330 - 453
Target Start/End: Complemental strand, 14214594 - 14214472
Alignment:
Q  330 taactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcc-taaaaaagaggaccgttgg 428  Q
    |||||||||||||||| |  |||||| |||||||| ||| ||||||||||||||||||||||| ||| |||||||| ||| |||||| |||   ||||||    
T  14214594 taactattaaacgttttaaattggtcatttatcttctttccatcattcaatttggtcctattttattcattttaacatccataaaaatgag--acgttgg 14214497  T
Q  429 ataaatgaggtctattagatctaac 453  Q
    ||||||||||||||| |||||||||    
T  14214496 ataaatgaggtctatcagatctaac 14214472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 332 - 453
Target Start/End: Complemental strand, 48338181 - 48338060
Alignment:
Q  332 actattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggata 431  Q
    |||||||||||||  |  ||||||||||||||| ||| ||||||||||||||||||||||| ||| ||||||||| || | |||||  ||||| ||||||    
T  48338181 actattaaacgttctaaattggtcctttatcttctttccatcattcaatttggtcctattttattcattttaaccaccaagaaaaggagaccgctggata 48338082  T
Q  432 aatgaggtctattagatctaac 453  Q
     ||||||||||| |||||||||    
T  48338081 tatgaggtctatcagatctaac 48338060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 327 - 453
Target Start/End: Complemental strand, 27226608 - 27226482
Alignment:
Q  327 ccttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgt 425  Q
    |||||| || ||||||||||| ||||||||||||| ||  |||||||||| |||||||||||||||| ||||||||||| | ||| ||||||| || |||    
T  27226608 ccttaaataataaacgtttcaatttggtcctttatgtttgttttcatcat-caatttggtcctattttattaattttaaacccctcaaaaagaagatcgt 27226510  T
Q  426 tggataaatgaggtctattagatctaac 453  Q
    |||||||| |||||| || |||||||||    
T  27226509 tggataaaggaggtccataagatctaac 27226482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 324 - 453
Target Start/End: Complemental strand, 50003295 - 50003166
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    ||||| ||||||||||||||||||   ||||||||||| ||  |||| ||||| |||||||||||||||| ||||||||||| ||||| ||||| | |||    
T  50003295 gtcccctaactattaaacgtttcaaaatggtcctttatgtttgttttaatcat-caatttggtcctattttattaattttaaactccttaaaaataagac 50003197  T
Q  423 cgttggataaatgaggtctattagatctaac 453  Q
    ||||||||||| |||||| || |||||||||    
T  50003196 cgttggataaaggaggtcaatcagatctaac 50003166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 405
Target Start/End: Original strand, 50719699 - 50719781
Alignment:
Q  324 gtcccttaactattaaac-gtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaac 405  Q
    |||| ||||||||||||| |||||| ||||||||||| |||| ||| |||||||||||||||| |||||| || |||||||||    
T  50719699 gtccattaactattaaaccgtttcaatttggtcctttgtcttgtttccatcattcaatttggttctattttatcaattttaac 50719781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 405
Target Start/End: Complemental strand, 50793149 - 50793067
Alignment:
Q  324 gtcccttaactattaaac-gtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaac 405  Q
    |||| ||||||||||||| |||||| ||||||||||| |||| ||| |||||||||||||||| |||||| || |||||||||    
T  50793149 gtccattaactattaaaccgtttcaatttggtcctttgtcttgtttccatcattcaatttggttctattttatcaattttaac 50793067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 439
Target Start/End: Original strand, 5384465 - 5384580
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    |||| |||| ||| |||||||||| ||||||||| ||||||  |||||| ||| ||||||||||| |||| ||||||||||| |  || ||||||| |||    
T  5384465 gtcctttaattataaaacgtttcaatttggtcctctatctttgttttcaacat-caatttggtccaattttattaattttaaacctcttaaaaagaagac 5384563  T
Q  423 cgttggataaatgaggt 439  Q
    ||| |||||||||||||    
T  5384564 cgtgggataaatgaggt 5384580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 417
Target Start/End: Original strand, 2088886 - 2088978
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaag 417  Q
    ||||||||| ||||||| |||||| |||||||||| |||||  |||||||||| |||||||||||||||| |||||||||||   ||||||||||    
T  2088886 gtcccttaattattaaatgtttcaatttggtcctt-atctttgttttcatcat-caatttggtcctattttattaattttaaatccctaaaaaag 2088978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 378 - 452
Target Start/End: Original strand, 44115535 - 44115609
Alignment:
Q  378 aatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaatgaggtctattagatctaa 452  Q
    ||||| |||||||||| |||||||||| ||||||||||||  |||||||||||||| ||||| | | ||||||||    
T  44115535 aatttagtcctatttcgttaattttaatctcctaaaaaaggagaccgttggataaaggaggtttgtgagatctaa 44115609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 45730681 - 45730789
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatc-ttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    |||||||||||||||||||||||| ||||| || ||||| || ||||||||| || |||| ||||||||| |||||||| ||   | ||||||||| |||    
T  45730681 gtcccttaactattaaacgtttcaatttggacc-ttatctttgttttcatca-tcgatttagtcctattttattaatttgaaatccataaaaaagaagac 45730778  T
Q  423 cgttggataaa 433  Q
    |||||||||||    
T  45730779 cgttggataaa 45730789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 453
Target Start/End: Original strand, 50002457 - 50002586
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    ||||| |||||||||||||||||    ||||||||||| ||  |||| ||||| |||||| ||||||||| ||||||||||| |||||  |||||| ||     
T  50002457 gtcccctaactattaaacgtttcgaaatggtcctttatgtttgttttaatcat-caatttagtcctattttattaattttaaactccttcaaaagaagat 50002555  T
Q  423 cgttggataaatgaggtctattagatctaac 453  Q
    ||||||||||| ||| || || |||||||||    
T  50002556 cgttggataaaggagatccatcagatctaac 50002586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 321 - 433
Target Start/End: Original strand, 53901610 - 53901721
Alignment:
Q  321 ttagtcccttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagag 419  Q
    |||||||||||||||||||| |||| | ||||||| ||||||||  ||||| |||| | |||||||||  ||| |||||||||||   |||||||||||     
T  53901610 ttagtcccttaactattaaatgttttaatttggtc-tttatctttgttttcgtcat-cgatttggtccacttttattaattttaaatccctaaaaaagaa 53901707  T
Q  420 gaccgttggataaa 433  Q
    ||||||||||||||    
T  53901708 gaccgttggataaa 53901721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 2764104 - 2764028
Alignment:
Q  378 aatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaatgaggtctattagatctaacc 454  Q
    ||||| |||||||||| | |||||||| ||||||||||||  |||||||||||||| ||| ||| | ||||||||||    
T  2764104 aatttagtcctatttcgtcaattttaatctcctaaaaaaggagaccgttggataaaggagatctgtgagatctaacc 2764028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 349 - 439
Target Start/End: Original strand, 5409407 - 5409497
Alignment:
Q  349 tttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaatgaggt 439  Q
    ||||||||||||||||  |||||||||| ||||||| ||| |||| ||||||||||| |  || ||||||| |||||||||||||| |||||    
T  5409407 tttggtcctttatctttgttttcatcat-caatttgatccaattttattaattttaaacctcttaaaaagaagaccgttggataaaggaggt 5409497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 441
Target Start/End: Complemental strand, 44116700 - 44116637
Alignment:
Q  378 aatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaatgaggtct 441  Q
    ||||| |||||||||| | |||||||| ||||||||||||  |||||||||||||| |||||||    
T  44116700 aatttagtcctatttcgtcaattttaatctcctaaaaaaggagaccgttggataaaggaggtct 44116637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 452
Target Start/End: Original strand, 2762887 - 2762961
Alignment:
Q  378 aatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaatgaggtctattagatctaa 452  Q
    ||||| ||| |||||| |||||||||| ||||||||||||  |||||||||||||| ||||| | | ||||||||    
T  2762887 aatttagtcatatttcgttaattttaatctcctaaaaaaggagaccgttggataaaagaggtatgtgagatctaa 2762961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 433
Target Start/End: Original strand, 27225481 - 27225586
Alignment:
Q  328 cttaactattaaacgtttcattttggtcctttat-cttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgtt 426  Q
    |||||||| ||||||||||| |||||| ||||||  || ||||| ||| ||||||| ||||||||| ||||||||||| |   | ||||||| |||||||    
T  27225481 cttaactaataaacgtttcaatttggttctttatgtttgttttcgtca-tcaatttagtcctattttattaattttaaacctttcaaaaagaagaccgtt 27225579  T
Q  427 ggataaa 433  Q
    |||||||    
T  27225580 ggataaa 27225586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 324 - 405
Target Start/End: Original strand, 14213176 - 14213257
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaac 405  Q
    ||||| ||||||| |||||||| |  |||||||||||||||  || |||||||||||||| | |||||| ||| ||||||||    
T  14213176 gtcccctaactatcaaacgttttaaattggtcctttatcttccttccatcattcaatttgattctattttatttattttaac 14213257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 433
Target Start/End: Original strand, 39530840 - 39530947
Alignment:
Q  325 tcccttaactattaaacgtttcattttggtcctttatc-ttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggacc 423  Q
    ||||||||||||||||||||||| |||| ||| ||||| || ||||| ||| || |||||||| ||||| |||||||||||   | | ||||||| ||||    
T  39530840 tcccttaactattaaacgtttcaatttgatcc-ttatctttgttttcgtca-tcgatttggtcatattttattaattttaattcctttaaaaagaagacc 39530937  T
Q  424 gttggataaa 433  Q
    ||||||||||    
T  39530938 gttggataaa 39530947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 433
Target Start/End: Complemental strand, 39531887 - 39531780
Alignment:
Q  325 tcccttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggacc 423  Q
    |||||||||||| ||| |||||| |||||||||| |||||  ||||| | || | ||||||||| |||| |||||||||||   ||||||||||| ||||    
T  39531887 tcccttaactatgaaatgtttcaatttggtcctt-atctttgttttcgttat-cgatttggtccaattttattaattttaaatccctaaaaaagaagacc 39531790  T
Q  424 gttggataaa 433  Q
    ||||||||||    
T  39531789 gttggataaa 39531780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 433
Target Start/End: Original strand, 50150769 - 50150873
Alignment:
Q  328 cttaactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttg 427  Q
    ||||||||||||| |||||| ||||||||||    || ||||| |||| |||||||||||||||| |||||||||||   ||||| ||||  ||||||||    
T  50150769 cttaactattaaatgtttcaatttggtccttgtctttgttttcgtcat-caatttggtcctattttattaattttaaatccctaagaaagtagaccgttg 50150867  T
Q  428 gataaa 433  Q
     |||||    
T  50150868 aataaa 50150873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 369
Target Start/End: Original strand, 40941527 - 40941575
Alignment:
Q  321 ttagtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    |||||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  40941527 ttagtcccttaactattaaaagtttcgttttggtcccttaacttatttt 40941575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 201
Target Start/End: Complemental strand, 21143820 - 21143734
Alignment:
Q  108 gttaatgacgttcaaaattgtggttaattgtgttcagctgatggctaacgagtaatgagttgtgacaccttgtaatatccattaaccatccact 201  Q
    |||||||| ||||||||||||||||||||  ||||||  ||||       | |||||||||||||||| |||| |||| |||||||||||||||    
T  21143820 gttaatgaagttcaaaattgtggttaattacgttcagtggatg-------attaatgagttgtgacactttgttatattcattaaccatccact 21143734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 1070162 - 1070117
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| |||| |||||||| ||||||||    
T  1070162 gtcccttaactattaaaagtttcgttttagtcctttaacttatttt 1070117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 2302065 - 2302114
Alignment:
Q  36 atatgatttataggtgttcaaatatacattatattcattaatcacaattt 85  Q
    ||||||||| || ||||||||||| |||| ||||||||||||||| ||||    
T  2302065 atatgatttttaagtgttcaaatacacatgatattcattaatcacgattt 2302114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 7584003 - 7584048
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  7584003 gtcccttaactattaaaagtttcgttttggtccattaacttatttt 7584048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 12061733 - 12061774
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  12061733 gtcccttaactattaaaagtttcgttttggtcctttaactta 12061774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 17933933 - 17933978
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  17933933 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 17933978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 18024926 - 18024881
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  18024926 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 18024881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 18270736 - 18270781
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  18270736 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 18270781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 18270926 - 18270885
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  18270926 gtcccttaactattaaaagtttctttttggtcctttaactta 18270885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 19794504 - 19794549
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  19794504 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 19794549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 22977089 - 22977130
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  22977089 gtcccttaactattaaaagtttcgttttggtcctttaactta 22977130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 23090565 - 23090520
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||  ||||||||||||| ||||||||    
T  23090565 gtcccttaactattaaaagttttgttttggtcctttaacttatttt 23090520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 28004375 - 28004420
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  28004375 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 28004420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 28033152 - 28033197
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  28033152 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 28033197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 30267500 - 30267545
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||  ||||||||||||| ||||||||    
T  30267500 gtcccttaactattaaaagttttgttttggtcctttaacttatttt 30267545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 30267720 - 30267675
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  30267720 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 30267675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 358
Target Start/End: Complemental strand, 33000871 - 33000838
Alignment:
Q  325 tcccttaactattaaacgtttcattttggtcctt 358  Q
    ||||||||||||||||||||||| ||||||||||    
T  33000871 tcccttaactattaaacgtttcaatttggtcctt 33000838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 40941811 - 40941766
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  40941811 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 40941766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 42213260 - 42213305
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  42213260 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 42213305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 42213481 - 42213440
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  42213481 gtcccttaactattaaaagtttcgttttggtcctttaactta 42213440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 428
Target Start/End: Complemental strand, 5411306 - 5411207
Alignment:
Q  329 ttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttg 427  Q
    |||||||||||| |||| | ||||||| ||||||||  |||||  ||| |||| ||||||||||| ||||||||||| |  || ||||||| ||||||||    
T  5411306 ttaactattaaatgttttaatttggtcttttatctttgttttcgccat-caatgtggtcctattttattaattttaaacatctcaaaaagaagaccgttg 5411208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 453
Target Start/End: Complemental strand, 21248323 - 21248200
Alignment:
Q  330 taactattaaacgtttcattttggtcctttatcttattttca-tcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttgg 428  Q
    ||||||||||||||||||   |||||| |||||||  ||| | ||||| | ||||||||||||| ||||||||||| |  || ||||||| ||| |||||    
T  21248323 taactattaaacgtttcaaaatggtcccttatctttgttttagtcatt-attttggtcctattttattaattttaaacctcttaaaaagaagactgttgg 21248225  T
Q  429 ataaatgaggtctattagatctaac 453  Q
    || || |||||| ||  ||||||||    
T  21248224 attaaggaggtccatcggatctaac 21248200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 324 - 360
Target Start/End: Complemental strand, 28004596 - 28004560
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtccttta 360  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  28004596 gtcccttaactattaaaagtttcgttttggtccttta 28004560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 439
Target Start/End: Complemental strand, 46690365 - 46690251
Alignment:
Q  325 tcccttaactattaaacgtttcattttggtcctttatct-tattttcatcattcaatttggtcctatttcattaatttt-aacctcctaaaaaagaggac 422  Q
    ||||||||||||||||||||| | |||| | |||||||| ||||||  ||| || ||||||| |||||| ||||||||| || |||  |||||||| |||    
T  46690365 tcccttaactattaaacgttttaatttgat-ctttatctatatttttgtca-tcgatttggttctattttattaattttaaatctctcaaaaaagaagac 46690268  T
Q  423 cgttggataaatgaggt 439  Q
    | ||||||||| |||||    
T  46690267 cattggataaaggaggt 46690251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 6e-26; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 324 - 452
Target Start/End: Complemental strand, 22794394 - 22794266
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggacc 423  Q
    ||||| ||||||||||||||| ||  ||| |||||||||||  || |||| |||||||||||||||||| ||| ||||||||| || |||||||  || |    
T  22794394 gtcccctaactattaaacgttccaaattgttcctttatcttccttccatccttcaatttggtcctattttattcattttaacccccaaaaaaaggagatc 22794295  T
Q  424 gttggataaatgaggtctattagatctaa 452  Q
    |||||||||||||||||||| ||||||||    
T  22794294 gttggataaatgaggtctatcagatctaa 22794266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 321 - 453
Target Start/End: Original strand, 47535700 - 47535832
Alignment:
Q  321 ttagtcccttaactattaaacgtttcattttggtcctttatc-ttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagag 419  Q
    |||||||| |||||||||||||||||| |||||||||||||| || |||| |||| ||||||||||||||||| ||||||||||| |  || |||||||     
T  47535700 ttagtcccctaactattaaacgtttcaatttggtcctttatctttgtttttatca-tcaatttggtcctattttattaattttaaacctctcaaaaagat 47535798  T
Q  420 gaccgttggataaatgaggtctattagatctaac 453  Q
    ||| |||||||||| ||| || || |||||||||    
T  47535799 gactgttggataaaggagatccatcagatctaac 47535832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 321 - 452
Target Start/End: Complemental strand, 29658688 - 29658558
Alignment:
Q  321 ttagtcccttaactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagagg 420  Q
    |||||||  ||||||||||||| || |  ||||||||||||||| |||||||||||| ||||| |||||||| ||| ||||||||| || |||||||  |    
T  29658688 ttagtcctctaactattaaacggtttaaattggtcctttatcttcttttcatcattctatttgatcctattttattcattttaacc-cccaaaaaaggag 29658590  T
Q  421 accgttggataaatgaggtctattagatctaa 452  Q
    ||| |||||||||| |||||||| ||||||||    
T  29658589 accattggataaataaggtctatcagatctaa 29658558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 4974117 - 4973992
Alignment:
Q  328 cttaactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttg 427  Q
    |||||||||||||||||| |  ||||| ||||||||| ||| |||| ||||||||||||| |||| ||| ||||||||| || | |||||  ||||||||    
T  4974117 cttaactattaaacgttttaaattggttctttatcttctttccatcgttcaatttggtccaattttattcattttaacccccaagaaaaggagaccgttg 4974018  T
Q  428 gataaatgaggtctattagatctaac 453  Q
    |||| ||||| ||||| |||||||||    
T  4974017 gatagatgagatctatcagatctaac 4973992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 32893505 - 32893630
Alignment:
Q  328 cttaactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttg 427  Q
    |||||||| ||||||||  |  ||| ||||||||||| ||| ||||||||||||||||| ||||| ||| ||||||||| || | |||||  ||||||||    
T  32893505 cttaactagtaaacgttctaaattgatcctttatcttctttccatcattcaatttggtcttattttattcattttaacccccaagaaaaggagaccgttg 32893604  T
Q  428 gataaatgaggtctattagatctaac 453  Q
    ||||| || ||||||| |||||||||    
T  32893605 gataagtgtggtctatcagatctaac 32893630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 324 - 452
Target Start/End: Complemental strand, 47536922 - 47536794
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    ||||| ||||||||||||  || |  |||||||||||||||  |||| ||||| |||||||||||||||| ||| ||||||| || || ||||||| |||    
T  47536922 gtcccctaactattaaacactttaaattggtcctttatctttgtttttatcat-caatttggtcctattttattgattttaaacttctcaaaaagaagac 47536824  T
Q  423 cgttggataaatgaggtctattagatctaa 452  Q
    ||||||||||| ||||||||| ||||||||    
T  47536823 cgttggataaaagaggtctatcagatctaa 47536794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 327 - 453
Target Start/End: Original strand, 40321116 - 40321242
Alignment:
Q  327 ccttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgt 425  Q
    |||||||||||||||||||||   || |||||||||||  |||| ||||| |||||||| ||| ||| |||||||||||  || | ||||||| ||||||    
T  40321116 ccttaactattaaacgtttcaaaatgatcctttatctttgttttaatcat-caatttgggccttttttattaattttaaaatcattaaaaagaagaccgt 40321214  T
Q  426 tggataaatgaggtctattagatctaac 453  Q
    |||||||| |||||| ||||||||||||    
T  40321215 tggataaaggaggtccattagatctaac 40321242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 453
Target Start/End: Original strand, 29657033 - 29657163
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaa-aagaggac 422  Q
    ||||| |||||||||||||||  |  ||||||||||||| | | | |||||||||||||| |||||||| ||||||||||||| || |||| ||   |||    
T  29657033 gtcccctaactattaaacgttcaaaattggtcctttatcatctctccatcattcaatttgatcctattttattaattttaacccccaaaaacaacgagac 29657132  T
Q  423 cgttggataaatgaggtctattagatctaac 453  Q
    |||||||||||||||  |||| |||||||||    
T  29657133 cgttggataaatgagaactatcagatctaac 29657163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 40881135 - 40881243
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctt-attttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    |||||||||||||||| ||||||| |||||||||| ||||| |||||  |||| |||||||||| ||||| |||||||||||   ||||||||||| |||    
T  40881135 gtcccttaactattaaccgtttcaatttggtcctt-atctttatttttgtcat-caatttggtcatattttattaattttaaatccctaaaaaagaagac 40881232  T
Q  423 cgttggataaa 433  Q
    |||||||||||    
T  40881233 cgttggataaa 40881243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 324 - 453
Target Start/End: Original strand, 4973557 - 4973686
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggacc 423  Q
    |||| ||||||||||||||||  |  ||||| ||||||||| |||||||| |||||||||||||||||| ||| |||| ||||  | | ||||   ||||    
T  4973557 gtcctttaactattaaacgttctaaattggttctttatcttcttttcatcgttcaatttggtcctattttattcatttgaaccctcaagaaaatgagacc 4973656  T
Q  424 gttggataaatgaggtctattagatctaac 453  Q
    |||||||| ||||||||||| | |||||||    
T  4973657 gttggatagatgaggtctatcatatctaac 4973686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 453
Target Start/End: Complemental strand, 23153702 - 23153573
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatc-ttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    ||||| |||||||||||||||||| ||||||| |||||| || |||| |||| |||||||  || ||||| ||||||||||| |  || ||||||| |||    
T  23153702 gtcccctaactattaaacgtttcaatttggtcatttatctttgtttttatca-tcaatttaatcatattttattaattttaaacctctcaaaaagaagac 23153604  T
Q  423 cgttggataaatgaggtctattagatctaac 453  Q
     |||||||||| |||||| || |||||||||    
T  23153603 tgttggataaaggaggtccatcagatctaac 23153573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 330 - 448
Target Start/End: Complemental strand, 32894863 - 32894745
Alignment:
Q  330 taactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttgga 429  Q
    ||||||||||| |||| |  |||||| |||||||| ||  ||||||| ||||||||||||||| ||| |||| ||||  | | |||||| ||||||||||    
T  32894863 taactattaaaagttttaaattggtcatttatcttcttcccatcattaaatttggtcctattttattcatttaaaccctcaagaaaagaagaccgttgga 32894764  T
Q  430 taaatgaggtctattagat 448  Q
    |||||||| ||||| ||||    
T  32894763 taaatgagatctatcagat 32894745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 324 - 452
Target Start/End: Complemental strand, 36584977 - 36584849
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctt-attttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    ||||| |||||||||||| |||||   |||||||||||||| |||||  |||| |||||||||| ||||| |||||||||||   ||| |||| || |||    
T  36584977 gtcccctaactattaaacatttcaaaatggtcctttatctttattttagtcat-caatttggtcatattttattaattttaaagcccttaaaacgaagac 36584879  T
Q  423 cgttggataaatgaggtctattagatctaa 452  Q
    ||||||||||| |||||| |||| ||||||    
T  36584878 cgttggataaaggaggtccattatatctaa 36584849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 330 - 452
Target Start/End: Original strand, 35044669 - 35044792
Alignment:
Q  330 taactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttc-attaattttaacctcctaaaaaagaggaccgttg 427  Q
    ||||||||||||||||||   || |||||||||||  |||| ||||| |||||||||| | |||  |||||||||||  |||| ||||||| ||||||||    
T  35044669 taactattaaacgtttcaaaatgatcctttatctttgttttaatcat-caatttggtcatttttttattaattttaaaatccttaaaaagaagaccgttg 35044767  T
Q  428 gataaatgaggtctattagatctaa 452  Q
    |||||| |||||| |||||||||||    
T  35044768 gataaaggaggtccattagatctaa 35044792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 330 - 433
Target Start/End: Complemental strand, 35045960 - 35045857
Alignment:
Q  330 taactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttgg 428  Q
    ||||||||||||||||||   ||||| ||||||||  |||| ||||| ||||||| |||||||| ||||||||||| ||||| |||||||  ||||||||    
T  35045960 taactattaaacgtttcaaaatggtcatttatctttgttttaatcat-caatttgatcctattttattaattttaaactccttaaaaagaataccgttgg 35045862  T
Q  429 ataaa 433  Q
    |||||    
T  35045861 ataaa 35045857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 33070649 - 33070757
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatc-ttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    |||||||||||||||||||||||| |||||| ||||||| || ||||  ||| |||||||| || ||||| |||||||||||   | ||||||||| |||    
T  33070649 gtcccttaactattaaacgtttcaatttggt-ctttatctttgtttttgtca-tcaatttgatcatattttattaattttaaatccataaaaaagaagac 33070746  T
Q  423 cgttggataaa 433  Q
    |||||||||||    
T  33070747 cgttggataaa 33070757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 417
Target Start/End: Complemental strand, 47537112 - 47537020
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatc-ttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaag 417  Q
    ||||||||||||||||| |||||| |||||||| ||||| |||||||| ||| |||||| |||||||||| |||||||||||   ||||||||||    
T  47537112 gtcccttaactattaaatgtttcaatttggtcc-ttatctttattttcgtca-tcaattcggtcctattttattaattttaaatccctaaaaaag 47537020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 433
Target Start/End: Complemental strand, 16957472 - 16957369
Alignment:
Q  330 taactattaaacgtttcattttggtccttta-tcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttgg 428  Q
    |||||||||||||||||| |||||||||||| | || ||||| ||| |||| |||||| ||||||||||||| ||| |  ||||||| || ||||||| |    
T  16957472 taactattaaacgtttcaatttggtcctttatttttgttttcctcaatcaa-ttggtcatatttcattaattctaatcggctaaaaatgaagaccgttag 16957374  T
Q  429 ataaa 433  Q
    |||||    
T  16957373 ataaa 16957369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 24653685 - 24653609
Alignment:
Q  378 aatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaatgaggtctattagatctaacc 454  Q
    ||||| |||||||||| | |||||||| ||||||||||||  |||||||||||||| |||||||   ||||||||||    
T  24653685 aatttagtcctatttcgtcaattttaatctcctaaaaaaggagaccgttggataaaggaggtctgggagatctaacc 24653609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 43704524 - 43704415
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttattttca-tcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    ||||| ||||||||||||||||||   ||||||||||||||  ||| | |||| || |||  |||||||| ||||||||||| | ||| ||||||| |||    
T  43704524 gtcccctaactattaaacgtttcaaaatggtcctttatctttgttttagtcat-cattttaatcctattttattaattttaaaccccttaaaaagaagac 43704426  T
Q  423 cgttggataaa 433  Q
    |||||||||||    
T  43704425 cgttggataaa 43704415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 376 - 453
Target Start/End: Complemental strand, 40322255 - 40322178
Alignment:
Q  376 tcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaatgaggtctattagatctaac 453  Q
    |||||||| |||||||| ||||||||||| ||||| ||||||| |||  ||||||||| |||||| ||  ||||||||    
T  40322255 tcaatttgatcctattttattaattttaaactccttaaaaagaagacaattggataaaggaggtccatcggatctaac 40322178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 376 - 453
Target Start/End: Complemental strand, 42521278 - 42521201
Alignment:
Q  376 tcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaatgaggtctattagatctaac 453  Q
    ||||||||||||||||| || ||||||||  |||| ||||| | |||||||||||||| |||||| ||  ||||||||    
T  42521278 tcaatttggtcctattttatcaattttaaaatccttaaaaataagaccgttggataaaggaggtccatcggatctaac 42521201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 324 - 404
Target Start/End: Original strand, 46196900 - 46196980
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaa 404  Q
    ||||| ||||||||||| |||| | ||||||| ||||||||  ||||| ||| |||||| ||||||||||||||||||||||    
T  46196900 gtcccctaactattaaatgttttaatttggtcgtttatctttgttttcctcaatcaatt-ggtcctatttcattaattttaa 46196980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 26866621 - 26866701
Alignment:
Q  7 ctattaatcatccaaat-gtgttcaactatatatgatttataggtgttcaaatatacattatattcattaatcacaatttg 86  Q
    ||||||| |||| |||| ||||||||  ||| || ||||  |||||||||||||||||| ||||||||||| |||||||||    
T  26866621 ctattaaccatctaaattgtgttcaaaaataaattattttcaggtgttcaaatatacatgatattcattaaccacaatttg 26866701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 433
Target Start/End: Original strand, 29344210 - 29344316
Alignment:
Q  326 cccttaactattaaacgtttcattttggtcctttatc-ttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccg 424  Q
    |||||||||||||||||||| | |||||||| ||||| || ||||| ||| || ||||||||||||||  ||||||| ||   | ||||||||| |||||    
T  29344210 cccttaactattaaacgttttaatttggtcc-ttatctttgttttcgtca-tcgatttggtcctatttttttaatttgaaatccataaaaaagaagaccg 29344307  T
Q  425 ttggataaa 433  Q
    |||||||||    
T  29344308 ttggataaa 29344316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 369
Target Start/End: Complemental strand, 36782949 - 36782901
Alignment:
Q  321 ttagtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||| |||| ||||| ||||||||||||| ||||||||    
T  36782949 ttagtcccttaactactaaaagtttcgttttggtcctttaacttatttt 36782901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 439
Target Start/End: Original strand, 43703141 - 43703212
Alignment:
Q  367 tttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaatgaggt 439  Q
    ||||||||| ||||||||| |||||| |||||||||||  | || ||||||| |||||||||||||| |||||    
T  43703141 tttcatcat-caatttggtactattttattaattttaaatttcttaaaaagaagaccgttggataaaggaggt 43703212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 433
Target Start/End: Original strand, 25734831 - 25734888
Alignment:
Q  375 ttcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaa 433  Q
    ||||||||||| |||||| |||||||||||||| || ||||||| ||| ||||||||||    
T  25734831 ttcaatttggttctattttattaattttaacct-ctcaaaaagaagacggttggataaa 25734888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 8736073 - 8736032
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  8736073 gtcccttaactattaaaagtttcgttttggtcctttaactta 8736032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 19069708 - 19069753
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  19069708 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 19069753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 23350964 - 23351009
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  23350964 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 23351009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 23351024 - 23351069
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  23351024 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 23351069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 23351084 - 23351129
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  23351084 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 23351129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 24417430 - 24417389
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  24417430 gtcccttaactattaaaagtttcgttttggtcctttaactta 24417389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 433
Target Start/End: Complemental strand, 29103330 - 29103273
Alignment:
Q  376 tcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaa 433  Q
    ||||||| ||||||||| ||||||||||| | | ||||||||| ||||||| ||||||    
T  29103330 tcaatttagtcctattttattaattttaaacccataaaaaagaagaccgttagataaa 29103273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 36701689 - 36701644
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  36701689 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 36701644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 38340837 - 38340882
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||  ||||||||||||| ||||||||    
T  38340837 gtcccttaactattaaaagttttgttttggtcctttaacttatttt 38340882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 453
Target Start/End: Original strand, 42520317 - 42520394
Alignment:
Q  376 tcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaatgaggtctattagatctaac 453  Q
    ||||||| ||| ||||| || |||||||| | | | ||||||  |||||||||||||| ||||||||| |||||||||    
T  42520317 tcaattttgtcatattttatcaattttaaacccattaaaaagtagaccgttggataaaggaggtctatcagatctaac 42520394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 5560718 - 5560770
Alignment:
Q  99 aaaattgttgttaatgacgttcaaaattgtggttaattgtgttcagctgatgg 151  Q
    |||||||| ||||||| | |||||||| ||||||||||||||| || ||||||    
T  5560718 aaaattgtggttaatggcattcaaaatcgtggttaattgtgtttagttgatgg 5560770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 334 - 433
Target Start/End: Complemental strand, 37783709 - 37783611
Alignment:
Q  334 tattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataa 432  Q
    |||||||||||||| ||||||| ||||||||  ||||| |||| | | |||||||||||| |||||||| ||   | ||||||||| |||||||||||||    
T  37783709 tattaaacgtttcaatttggtc-tttatctttgttttcgtcat-cgagttggtcctattttattaatttgaaatccataaaaaagaagaccgttggataa 37783612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 369
Target Start/End: Complemental strand, 39384106 - 39384062
Alignment:
Q  325 tcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    |||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  39384106 tcccttaactattaaaagtttcgttttggtcccttaacttatttt 39384062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 369
Target Start/End: Original strand, 45057591 - 45057635
Alignment:
Q  325 tcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    |||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  45057591 tcccttaactattaaaagtttcgttttggtcccttaacttatttt 45057635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 369
Target Start/End: Complemental strand, 45057869 - 45057825
Alignment:
Q  325 tcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    |||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  45057869 tcccttaactattaaaagtttcgttttggtcccttaacttatttt 45057825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 330 - 453
Target Start/End: Original strand, 12364240 - 12364363
Alignment:
Q  330 taactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttgga 429  Q
    |||||||||||||||| |  |||||| |||||||| |||   || |||||||||||||||||| ||| ||||||||| || ||||||| ||||| |||||    
T  12364240 taactattaaacgttttaaattggtcatttatcttctttcagtccttcaatttggtcctatttaatttattttaacccccaaaaaaaggggaccattgga 12364339  T
Q  430 taaatgaggtctattagatctaac 453  Q
    |||||||||||||| |||||||||    
T  12364340 taaatgaggtctatcagatctaac 12364363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 324 - 453
Target Start/End: Original strand, 20921554 - 20921684
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaa-cctcctaaaaaagaggac 422  Q
    ||||| ||| ||||||||||||||  ||||||||| ||||| ||| ||||||||||||||||||||||| ||| ||||||| |||   |||||||  |||    
T  20921554 gtcccctaaatattaaacgtttcaaattggtccttgatcttctttccatcattcaatttggtcctattttattcattttaaccctaaaaaaaaaggagac 20921653  T
Q  423 cgttggataaatgaggtctattagatctaac 453  Q
     |||||||||||||||||||| | |||||||    
T  20921654 tgttggataaatgaggtctatcatatctaac 20921684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 321 - 453
Target Start/End: Complemental strand, 372042 - 371910
Alignment:
Q  321 ttagtcccttaactattaaacgtttcattttggtcctttatc-ttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagag 419  Q
    |||||||| |||||||||||||||||| |||| ||||||||| || ||||||||| |||||||| |||||||| ||||||||||| |  || |||||||     
T  372042 ttagtcccctaactattaaacgtttcaatttgatcctttatctttgttttcatca-tcaatttgatcctattttattaattttaaacctctcaaaaagat 371944  T
Q  420 gaccgttggataaatgaggtctattagatctaac 453  Q
    ||| |||||||||| |||||  || |||||||||    
T  371943 gactgttggataaaggaggttcatcagatctaac 371910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 329 - 433
Target Start/End: Original strand, 38593080 - 38593184
Alignment:
Q  329 ttaactattaaacgtttcattttggtcctttatcttattttca-tcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttg 427  Q
    |||||||||||||||||||   ||||||||| ||||  ||| | |||| |||||||||||||||| ||||||||||| ||||| ||||||| ||||||||    
T  38593080 ttaactattaaacgtttcaaaatggtcctttgtctttgttttagtcat-caatttggtcctattttattaattttaaactcctcaaaaagaagaccgttg 38593178  T
Q  428 gataaa 433  Q
    ||||||    
T  38593179 gataaa 38593184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 329 - 433
Target Start/End: Original strand, 38596676 - 38596780
Alignment:
Q  329 ttaactattaaacgtttcattttggtcctttatcttattttca-tcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttg 427  Q
    |||||||||||||||||||   ||||||||| ||||  ||| | |||| |||||||||||||||| ||||||||||| ||||| ||||||| ||||||||    
T  38596676 ttaactattaaacgtttcaaaatggtcctttgtctttgttttagtcat-caatttggtcctattttattaattttaaactcctcaaaaagaagaccgttg 38596774  T
Q  428 gataaa 433  Q
    ||||||    
T  38596775 gataaa 38596780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 351 - 453
Target Start/End: Complemental strand, 12366061 - 12365961
Alignment:
Q  351 tggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaatgaggtctattagatct 450  Q
    ||||||||||| || ||| ||||||||||||||||||||||| ||| ||||||||| ||  |||| |  |||||||||||||||||| ||||| |||| |    
T  12366061 tggtcctttatattctttccatcattcaatttggtcctattttattcattttaaccccc--aaaatggagaccgttggataaatgagatctatcagatat 12365964  T
Q  451 aac 453  Q
    |||    
T  12365963 aac 12365961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 433
Target Start/End: Complemental strand, 20630742 - 20630635
Alignment:
Q  325 tcccttaactattaaacgtttcattttggtcctttatc-ttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggacc 423  Q
    ||||||||||||||||||||||| |||||||| ||||| || ||||| ||| || ||||||||| |||| |||||||||||   |||||||||||  |||    
T  20630742 tcccttaactattaaacgtttcaatttggtcc-ttatctttgttttcgtca-tcgatttggtccaattttattaattttaaatccctaaaaaagaatacc 20630645  T
Q  424 gttggataaa 433  Q
    ||||||||||    
T  20630644 gttggataaa 20630635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 376 - 440
Target Start/End: Original strand, 40542331 - 40542395
Alignment:
Q  376 tcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaatgaggtc 440  Q
    ||||||||||||||||||||||||||||||  ||||||||||  ||||||| |||||| ||||||    
T  40542331 tcaatttggtcctatttcattaattttaactccctaaaaaaggagaccgttagataaaggaggtc 40542395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 453
Target Start/End: Original strand, 10330750 - 10330878
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggacc 423  Q
    ||||| |||| |||||||||||||   ||||| ||||||||  ||| | |  | ||||||||||||||| ||||||||||| | ||| ||||||| |||     
T  10330750 gtcccctaacgattaaacgtttcaaaatggtcatttatctttgttttagccattaatttggtcctattttattaattttaaaccccttaaaaagaagact 10330849  T
Q  424 gttggataaatgaggtctattagatctaac 453  Q
     ||||||||| ||||||||| |||||||||    
T  10330850 attggataaa-gaggtctatcagatctaac 10330878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 452
Target Start/End: Original strand, 370863 - 370939
Alignment:
Q  376 tcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaatgaggtctattagatctaa 452  Q
    |||||||| |||||||| ||| ||||||| |  |||||||| | |||||||||||||||||||||||| | ||||||    
T  370863 tcaatttgatcctattttattgattttaaacctctaaaaaataagaccgttggataaatgaggtctatcaaatctaa 370939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 433
Target Start/End: Complemental strand, 33553433 - 33553329
Alignment:
Q  328 cttaactattaaacgtttcattttggtcctttatc-ttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgtt 426  Q
    |||||||||||||||||||| |||||||| ||||| || ||||| ||| || |||||||||||||| |||||||||||    || ||||||| |||||||    
T  33553433 cttaactattaaacgtttcaatttggtcc-ttatctttgttttcgtca-tcgatttggtcctattttattaattttaaatctctcaaaaagaagaccgtt 33553336  T
Q  427 ggataaa 433  Q
    | |||||    
T  33553335 gaataaa 33553329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 450
Target Start/End: Complemental strand, 38594122 - 38593993
Alignment:
Q  321 ttagtcccttaactattaaacgtttcattttggtcctttatctt-attttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagag 419  Q
    ||||||||||||||||||||||||| |   ||||| |||||||| |||||   |||  ||||||||||||||| ||||||||||| ||  | |||||||     
T  38594122 ttagtcccttaactattaaacgttttaaaatggtcatttatctttattttagacata-aatttggtcctattttattaattttaaacttatcaaaaagaa 38594024  T
Q  420 gaccgttggataaatgaggtctattagatct 450  Q
    ||  |||||||||| |||||| || ||||||    
T  38594023 gattgttggataaaggaggtccatcagatct 38593993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 450
Target Start/End: Complemental strand, 38597718 - 38597589
Alignment:
Q  321 ttagtcccttaactattaaacgtttcattttggtcctttatctt-attttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagag 419  Q
    ||||||||||||||||||||||||| |   ||||| |||||||| |||||   |||  ||||||||||||||| ||||||||||| ||  | |||||||     
T  38597718 ttagtcccttaactattaaacgttttaaaatggtcatttatctttattttagacata-aatttggtcctattttattaattttaaacttatcaaaaagaa 38597620  T
Q  420 gaccgttggataaatgaggtctattagatct 450  Q
    ||  |||||||||| |||||| || ||||||    
T  38597619 gattgttggataaaggaggtccatcagatct 38597589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 30178589 - 30178697
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta-ttttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggac 422  Q
    ||||||||||||| ||| |||||| ||||||| || |||||  ||||| |||| ||||||| |||||||| |||||||||||   ||||||||||  |||    
T  30178589 gtcccttaactatcaaatgtttcagtttggtcgtt-atctttgttttcgtcat-caatttgatcctattttattaattttaaatacctaaaaaagtagac 30178686  T
Q  423 cgttggataaa 433  Q
    | |||||||||    
T  30178687 cattggataaa 30178697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 6645630 - 6645671
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  6645630 gtcccttaactattaaaagtttcgttttggtcctttaactta 6645671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 6645820 - 6645775
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  6645820 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 6645775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 7182459 - 7182504
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  7182459 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 7182504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 10414287 - 10414242
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  10414287 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 10414242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 10414347 - 10414302
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  10414347 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 10414302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 15129783 - 15129828
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  15129783 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 15129828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 15130003 - 15129958
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  15130003 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 15129958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 23461396 - 23461355
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| |||| |||||||||||||| ||||    
T  23461396 gtcccttaactattaaaagttttattttggtcctttaactta 23461355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 26892573 - 26892614
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||||||||||| ||||| ||||    
T  26892573 gtcccttaactattaaaagtttcattttggtgctttaactta 26892614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 26892794 - 26892749
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  26892794 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 26892749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 26898012 - 26898053
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||||||||||| ||||| ||||    
T  26898012 gtcccttaactattaaaagtttcattttggtgctttaactta 26898053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 27516268 - 27516309
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  27516268 gtcccttaactattaaaagtttcgttttggtcctttaactta 27516309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 27516490 - 27516445
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  27516490 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 27516445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 35251826 - 35251781
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  35251826 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 35251781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 36099433 - 36099478
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  36099433 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 36099478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 36099653 - 36099608
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  36099653 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 36099608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 38578162 - 38578121
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  38578162 gtcccttaactattaaaagtttcgttttggtcctttaactta 38578121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 39110121 - 39110166
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  39110121 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 39110166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 45001382 - 45001337
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  45001382 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 45001337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 369
Target Start/End: Complemental strand, 18904958 - 18904914
Alignment:
Q  325 tcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    |||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  18904958 tcccttaactattaaaagtttcgttttggtcccttaacttatttt 18904914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 365
Target Start/End: Original strand, 35251606 - 35251646
Alignment:
Q  325 tcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    |||||||||||||||| |||| |||||||||||||| ||||    
T  35251606 tcccttaactattaaaagttttattttggtcctttaactta 35251646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1337 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold1337
Description:

Target: scaffold1337; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 329 - 454
Target Start/End: Original strand, 281 - 407
Alignment:
Q  329 ttaactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagag-gaccgttg 427  Q
    |||||||| ||||| |||| |||| |||||| |||| ||| ||||||||||||||||||||||||||||||||||| ||| |||||||  | ||||||||    
T  281 ttaactatcaaacgcttcaatttgatcctttttcttgtttccatcattcaatttggtcctatttcattaattttaatctcttaaaaaaatgtgaccgttg 380  T
Q  428 gataaatgaggtctattagatctaacc 454  Q
    |||||||||| ||| | | ||||||||    
T  381 gataaatgagatctgtcatatctaacc 407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 406
Target Start/End: Original strand, 98101 - 98175
Alignment:
Q  332 actattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacc 406  Q
    |||||||||||||  |  ||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||    
T  98101 actattaaacgttctaaattggtcctttatcttcttttcatcattcaatttggtcctattttattcattttaacc 98175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 446
Target Start/End: Complemental strand, 98745 - 98631
Alignment:
Q  332 actattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggata 431  Q
    |||||||||||||  |  ||||| ||||||||| ||| ||||||||||||||||||||||| ||| | |||||||  | ||| |||  ||||||| ||||    
T  98745 actattaaacgttctaaattggttctttatcttctttccatcattcaatttggtcctattttattcagtttaaccctcaaaagaaggagaccgttcgata 98646  T
Q  432 aatgaggtctattag 446  Q
    |||||||||||||||    
T  98645 aatgaggtctattag 98631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 453
Target Start/End: Original strand, 35413 - 35535
Alignment:
Q  330 taactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttgga 429  Q
    |||||||||||||||| |  ||||| ||||||||| ||| ||| |||||||| |||| ||||| ||| ||||||||  ||  ||||||  |||| |||||    
T  35413 taactattaaacgttttaaattggttctttatcttctttccattattcaatt-ggtcatattttattcattttaacacccataaaaaggagaccattgga 35511  T
Q  430 taaatgaggtctattagatctaac 453  Q
    |||||||||| ||| |||||||||    
T  35512 taaatgaggtttatcagatctaac 35535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 374 - 453
Target Start/End: Complemental strand, 36731 - 36655
Alignment:
Q  374 attcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaatgaggtctattagatctaac 453  Q
    ||||||||||||  ||||| ||||||||||||     |||||| | |||||||||||||||||||||||| |||||||||    
T  36731 attcaatttggtgttattttattaattttaacac---aaaaaaaaagaccgttggataaatgaggtctatcagatctaac 36655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 405
Target Start/End: Complemental strand, 36814 - 36737
Alignment:
Q  328 cttaactattaaacgtttcattttggtcctttatcttattttcatcattcaatttggtcctatttcattaattttaac 405  Q
    |||| |||||||| ||||||  || ||| |||||||| ||| ||||||||||||||||  ||||| ||||||||||||    
T  36814 cttacctattaaatgtttcaaattagtcttttatcttctttccatcattcaatttggtgttattttattaattttaac 36737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 369
Target Start/End: Complemental strand, 8162 - 8120
Alignment:
Q  327 ccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||    
T  8162 ccttaactattaaaagtttcgttttggtcctttaacttatttt 8120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 11373 - 11328
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  11373 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 11328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 18415 - 18460
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  18415 gtcccttaactattaaaagtttcgttttggtcccttaacttatttt 18460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 369
Target Start/End: Complemental strand, 18725 - 18681
Alignment:
Q  325 tcccttaactattaaacgtttcattttggtcctttatcttatttt 369  Q
    |||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  18725 tcccttaactattaaaagtttcgttttggtcccttaacttatttt 18681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 27778 - 27819
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  27778 gtcccttaactattaaaagtttcgttttggtcctttaactta 27819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 4947 - 4988
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  4947 gtcccttaactattaaaagtttcgttttggtcctttaactta 4988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 99929 - 99888
Alignment:
Q  324 gtcccttaactattaaacgtttcattttggtcctttatctta 365  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  99929 gtcccttaactattaaaagtttcgttttggtcctttaactta 99888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 433
Target Start/End: Original strand, 204633 - 204690
Alignment:
Q  376 tcaatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaa 433  Q
    ||||||||||||||||| |||||||||||   ||||||||||  |||| |||||||||    
T  204633 tcaatttggtcctattttattaattttaaatccctaaaaaagtagaccattggataaa 204690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 377 - 453
Target Start/End: Original strand, 21239 - 21315
Alignment:
Q  377 caatttggtcctatttcattaattttaacctcctaaaaaagaggaccgttggataaatgaggtctattagatctaac 453  Q
    ||||||||||| |||| || |||||||| |   ||||||||| |||||| ||||||| ||||||||  |||||||||    
T  21239 caatttggtccaatttaatcaattttaatcctataaaaaagaagaccgtcggataaaggaggtctacgagatctaac 21315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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