View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3002_high_31 (Length: 442)

Name: NF3002_high_31
Description: NF3002
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3002_high_31
NF3002_high_31
[»] chr3 (43 HSPs)
chr3 (11-428)||(11642012-11642429)
chr3 (160-285)||(15048013-15048138)
chr3 (165-286)||(30311304-30311425)
chr3 (158-285)||(46518627-46518754)
chr3 (165-285)||(27093319-27093438)
chr3 (165-284)||(10445096-10445216)
chr3 (160-284)||(37788418-37788541)
chr3 (158-277)||(8075077-8075196)
chr3 (159-277)||(2667869-2667987)
chr3 (158-284)||(4222141-4222267)
chr3 (158-280)||(45699878-45700000)
chr3 (173-286)||(32651403-32651515)
chr3 (158-242)||(3427504-3427587)
chr3 (158-254)||(44743805-44743901)
chr3 (158-229)||(46552986-46553057)
chr3 (158-284)||(26505311-26505437)
chr3 (158-284)||(51903828-51903954)
chr3 (159-284)||(14339610-14339735)
chr3 (158-279)||(34928891-34929012)
chr3 (160-284)||(40063619-40063744)
chr3 (158-286)||(36720379-36720507)
chr3 (158-285)||(31520555-31520682)
chr3 (165-285)||(34062505-34062627)
chr3 (170-284)||(28703366-28703480)
chr3 (157-222)||(43243415-43243480)
chr3 (159-284)||(8170672-8170797)
chr3 (158-283)||(47454567-47454692)
chr3 (192-284)||(203090-203182)
chr3 (158-285)||(7975417-7975551)
chr3 (204-284)||(14186648-14186727)
chr3 (165-284)||(16354851-16354968)
chr3 (172-284)||(31788935-31789046)
chr3 (177-281)||(53412948-53413052)
chr3 (222-284)||(19341801-19341863)
chr3 (228-285)||(5499427-5499484)
chr3 (157-285)||(19154630-19154758)
chr3 (210-285)||(9557319-9557394)
chr3 (203-286)||(39253696-39253778)
chr3 (166-284)||(37051252-37051370)
chr3 (160-285)||(10499061-10499186)
chr3 (158-227)||(10969867-10969936)
chr3 (191-231)||(17155061-17155101)
chr3 (204-284)||(21960551-21960631)
[»] chr7 (55 HSPs)
chr7 (160-284)||(18363696-18363819)
chr7 (158-284)||(26459360-26459486)
chr7 (158-285)||(25655178-25655305)
chr7 (165-284)||(39631844-39631963)
chr7 (166-284)||(23301560-23301678)
chr7 (158-263)||(9608579-9608684)
chr7 (158-263)||(9836151-9836256)
chr7 (165-286)||(17040969-17041090)
chr7 (160-285)||(43215183-43215308)
chr7 (165-285)||(35119382-35119502)
chr7 (158-285)||(33181160-33181287)
chr7 (158-284)||(15137553-15137679)
chr7 (158-284)||(37094749-37094875)
chr7 (158-242)||(2962501-2962585)
chr7 (158-282)||(7744062-7744186)
chr7 (160-279)||(41519217-41519335)
chr7 (157-284)||(43590907-43591034)
chr7 (165-283)||(2495793-2495911)
chr7 (158-255)||(21569982-21570079)
chr7 (192-285)||(23552117-23552210)
chr7 (158-263)||(29785251-29785356)
chr7 (204-285)||(45709704-45709785)
chr7 (157-285)||(2446307-2446435)
chr7 (170-281)||(41519072-41519183)
chr7 (158-284)||(25590611-25590737)
chr7 (158-263)||(36877164-36877269)
chr7 (168-284)||(17113795-17113911)
chr7 (165-285)||(30579334-30579454)
chr7 (165-284)||(5273547-5273666)
chr7 (159-286)||(11720911-11721038)
chr7 (209-284)||(22760863-22760938)
chr7 (165-239)||(21558173-21558247)
chr7 (158-284)||(48771938-48772064)
chr7 (204-281)||(20952145-20952222)
chr7 (227-284)||(27776172-27776229)
chr7 (158-242)||(9183141-9183225)
chr7 (165-285)||(26526289-26526408)
chr7 (158-282)||(29385693-29385817)
chr7 (160-212)||(42260997-42261049)
chr7 (158-281)||(15905624-15905746)
chr7 (209-284)||(20335832-20335907)
chr7 (165-284)||(24513797-24513916)
chr7 (225-284)||(25021352-25021411)
chr7 (158-284)||(30442488-30442612)
chr7 (165-284)||(31835192-31835311)
chr7 (204-283)||(35513467-35513546)
chr7 (158-284)||(26199509-26199635)
chr7 (165-231)||(33222423-33222489)
chr7 (155-253)||(43633243-43633341)
chr7 (211-284)||(7801180-7801253)
chr7 (185-246)||(11700203-11700263)
chr7 (189-286)||(13106763-13106859)
chr7 (185-285)||(18056752-18056852)
chr7 (224-284)||(42836017-42836077)
chr7 (158-230)||(48983683-48983755)
[»] chr2 (37 HSPs)
chr2 (166-286)||(34041546-34041666)
chr2 (158-284)||(4438929-4439055)
chr2 (159-286)||(4060165-4060292)
chr2 (161-285)||(7798989-7799112)
chr2 (165-285)||(14500276-14500396)
chr2 (185-284)||(19244109-19244208)
chr2 (158-284)||(5147630-5147755)
chr2 (210-284)||(35916086-35916160)
chr2 (165-286)||(19322766-19322887)
chr2 (160-285)||(37480074-37480199)
chr2 (165-284)||(42922414-42922534)
chr2 (158-241)||(2750576-2750659)
chr2 (159-242)||(13803537-13803620)
chr2 (177-284)||(40416359-40416466)
chr2 (158-284)||(1435064-1435189)
chr2 (165-283)||(16918535-16918653)
chr2 (160-277)||(9776313-9776428)
chr2 (160-285)||(21195628-21195753)
chr2 (165-286)||(42602552-42602673)
chr2 (224-284)||(16381670-16381730)
chr2 (160-284)||(42327347-42327471)
chr2 (198-285)||(3001378-3001465)
chr2 (165-284)||(11062360-11062478)
chr2 (192-286)||(1729814-1729908)
chr2 (171-285)||(45026742-45026856)
chr2 (209-286)||(29503269-29503346)
chr2 (165-242)||(30410506-30410583)
chr2 (158-285)||(11251086-11251213)
chr2 (160-239)||(12497734-12497813)
chr2 (165-242)||(41908595-41908672)
chr2 (157-281)||(33962733-33962857)
chr2 (209-285)||(39714991-39715067)
chr2 (157-196)||(2144533-2144572)
chr2 (158-285)||(11737995-11738121)
chr2 (159-246)||(35203334-35203421)
chr2 (228-285)||(29197396-29197453)
chr2 (157-241)||(9577879-9577963)
[»] chr4 (51 HSPs)
chr4 (158-289)||(4249172-4249303)
chr4 (165-284)||(37109308-37109427)
chr4 (165-281)||(7292755-7292871)
chr4 (154-242)||(23377998-23378086)
chr4 (169-284)||(1730450-1730565)
chr4 (158-284)||(8030154-8030280)
chr4 (203-284)||(46545711-46545792)
chr4 (165-284)||(31759615-31759734)
chr4 (165-284)||(31826609-31826728)
chr4 (158-284)||(37274409-37274536)
chr4 (158-269)||(38869783-38869894)
chr4 (160-234)||(24991577-24991651)
chr4 (158-234)||(6666376-6666452)
chr4 (165-234)||(16581743-16581812)
chr4 (165-286)||(19680745-19680866)
chr4 (156-232)||(15180790-15180866)
chr4 (165-285)||(51250479-51250599)
chr4 (165-284)||(28635696-28635815)
chr4 (165-285)||(7949411-7949531)
chr4 (158-286)||(18404833-18404961)
chr4 (205-284)||(45060978-45061057)
chr4 (209-284)||(47044717-47044792)
chr4 (158-272)||(7539602-7539715)
chr4 (172-246)||(21375815-21375889)
chr4 (191-261)||(42644893-42644963)
chr4 (203-256)||(3743105-3743158)
chr4 (170-263)||(11592115-11592208)
chr4 (158-263)||(33632086-33632191)
chr4 (182-286)||(4923548-4923652)
chr4 (165-241)||(6894999-6895074)
chr4 (165-281)||(33438435-33438551)
chr4 (165-277)||(49576851-49576963)
chr4 (158-286)||(52254354-52254482)
chr4 (202-273)||(306304-306375)
chr4 (217-284)||(4483310-4483377)
chr4 (165-284)||(8714680-8714798)
chr4 (159-234)||(12448758-12448832)
chr4 (209-284)||(19238578-19238653)
chr4 (199-286)||(21660135-21660222)
chr4 (199-286)||(21668899-21668986)
chr4 (158-197)||(26499026-26499065)
chr4 (165-286)||(2184989-2185111)
chr4 (160-234)||(9693450-9693524)
chr4 (192-286)||(11418218-11418311)
chr4 (158-240)||(20770955-20771037)
chr4 (227-284)||(9936980-9937037)
chr4 (236-285)||(27965538-27965587)
chr4 (165-242)||(30938176-30938253)
chr4 (158-263)||(48480776-48480881)
chr4 (210-286)||(20281194-20281270)
chr4 (170-242)||(46295139-46295211)
[»] chr1 (54 HSPs)
chr1 (159-289)||(2799857-2799987)
chr1 (172-286)||(8904412-8904526)
chr1 (159-285)||(8177133-8177259)
chr1 (157-285)||(6122793-6122921)
chr1 (170-282)||(33700735-33700847)
chr1 (159-284)||(9165146-9165271)
chr1 (165-285)||(11063555-11063675)
chr1 (165-285)||(36371469-36371589)
chr1 (185-285)||(51814493-51814593)
chr1 (158-253)||(40810498-40810593)
chr1 (158-284)||(16893394-16893520)
chr1 (159-273)||(52336725-52336839)
chr1 (157-286)||(21547429-21547558)
chr1 (165-281)||(15786278-15786393)
chr1 (177-284)||(42787208-42787315)
chr1 (158-280)||(14787286-14787408)
chr1 (159-284)||(31794215-31794340)
chr1 (159-286)||(4566546-4566672)
chr1 (158-285)||(6650594-6650721)
chr1 (158-233)||(29753700-29753775)
chr1 (166-284)||(10526823-10526941)
chr1 (157-242)||(39979126-39979211)
chr1 (159-284)||(44961765-44961890)
chr1 (192-284)||(27567106-27567198)
chr1 (165-284)||(1094525-1094644)
chr1 (205-284)||(7743322-7743401)
chr1 (169-283)||(18459192-18459307)
chr1 (209-284)||(19528328-19528403)
chr1 (192-283)||(44126396-44126487)
chr1 (158-284)||(9117119-9117245)
chr1 (165-263)||(9643766-9643864)
chr1 (227-285)||(25297771-25297829)
chr1 (165-263)||(48619166-48619264)
chr1 (192-281)||(9964441-9964530)
chr1 (157-286)||(40257397-40257526)
chr1 (176-280)||(19088213-19088317)
chr1 (160-284)||(52116733-52116857)
chr1 (167-254)||(9879468-9879555)
chr1 (225-284)||(11438501-11438560)
chr1 (209-284)||(16169979-16170054)
chr1 (203-286)||(34460904-34460987)
chr1 (214-285)||(41508830-41508901)
chr1 (158-256)||(3265952-3266049)
chr1 (158-284)||(45266834-45266960)
chr1 (158-215)||(3679264-3679321)
chr1 (167-256)||(4280410-4280499)
chr1 (227-284)||(12259260-12259317)
chr1 (203-280)||(17745251-17745328)
chr1 (203-248)||(27127348-27127393)
chr1 (177-234)||(32524381-32524438)
chr1 (165-234)||(33981120-33981189)
chr1 (209-277)||(17410238-17410306)
chr1 (159-215)||(23745191-23745247)
chr1 (165-284)||(50901581-50901700)
[»] chr6 (25 HSPs)
chr6 (167-285)||(12188262-12188380)
chr6 (160-286)||(13330085-13330211)
chr6 (159-253)||(28363968-28364062)
chr6 (165-284)||(15951259-15951378)
chr6 (165-255)||(23910070-23910158)
chr6 (159-278)||(34444809-34444928)
chr6 (165-287)||(15496994-15497116)
chr6 (209-289)||(14199948-14200028)
chr6 (158-284)||(21418470-21418596)
chr6 (168-282)||(32613100-32613214)
chr6 (167-228)||(11306133-11306194)
chr6 (158-242)||(20863417-20863500)
chr6 (158-245)||(3925783-3925870)
chr6 (159-254)||(11103386-11103481)
chr6 (158-284)||(12633009-12633136)
chr6 (165-268)||(20213057-20213160)
chr6 (165-268)||(22107080-22107183)
chr6 (172-242)||(2092495-2092565)
chr6 (165-263)||(6385883-6385981)
chr6 (230-284)||(34877095-34877149)
chr6 (165-242)||(98745-98822)
chr6 (204-285)||(33549103-33549184)
chr6 (158-234)||(8597697-8597773)
chr6 (158-286)||(12234457-12234585)
chr6 (209-249)||(32050357-32050397)
[»] chr5 (36 HSPs)
chr5 (159-284)||(25627057-25627181)
chr5 (158-284)||(21549088-21549213)
chr5 (165-284)||(6844729-6844848)
chr5 (159-284)||(19043458-19043582)
chr5 (158-284)||(43230724-43230852)
chr5 (160-284)||(7918421-7918545)
chr5 (182-285)||(26078025-26078128)
chr5 (165-284)||(29075781-29075900)
chr5 (165-260)||(31074256-31074351)
chr5 (179-285)||(14285160-14285266)
chr5 (172-285)||(34984805-34984918)
chr5 (157-284)||(16773807-16773934)
chr5 (158-284)||(8278225-8278351)
chr5 (165-286)||(16436616-16436735)
chr5 (157-234)||(17155872-17155949)
chr5 (192-281)||(18437088-18437177)
chr5 (158-239)||(18595951-18596032)
chr5 (172-286)||(87388-87501)
chr5 (158-284)||(16457810-16457936)
chr5 (203-241)||(21086757-21086795)
chr5 (160-242)||(37258318-37258400)
chr5 (167-284)||(22661214-22661331)
chr5 (165-253)||(12877724-12877812)
chr5 (165-285)||(22020819-22020939)
chr5 (218-286)||(30883208-30883276)
chr5 (169-284)||(17028225-17028340)
chr5 (165-284)||(21589288-21589407)
chr5 (230-285)||(26598523-26598578)
chr5 (177-239)||(18974005-18974067)
chr5 (160-285)||(30735019-30735147)
chr5 (165-234)||(2269181-2269250)
chr5 (203-284)||(3252284-3252365)
chr5 (165-222)||(38299595-38299652)
chr5 (209-285)||(22737081-22737157)
chr5 (165-233)||(30000167-30000235)
chr5 (160-284)||(40281044-40281168)
[»] chr8 (38 HSPs)
chr8 (158-284)||(18540298-18540424)
chr8 (165-284)||(8059632-8059751)
chr8 (165-284)||(11819776-11819895)
chr8 (158-285)||(44780064-44780191)
chr8 (199-288)||(19703478-19703567)
chr8 (160-291)||(16852333-16852464)
chr8 (158-241)||(33017257-33017339)
chr8 (157-285)||(12988427-12988554)
chr8 (166-284)||(29431011-29431129)
chr8 (209-286)||(3826778-3826855)
chr8 (165-274)||(29915877-29915986)
chr8 (158-284)||(27750730-27750856)
chr8 (203-284)||(23361644-23361725)
chr8 (165-284)||(20994414-20994534)
chr8 (159-282)||(2203494-2203617)
chr8 (169-284)||(30483845-30483960)
chr8 (204-282)||(3624582-3624660)
chr8 (158-284)||(6569721-6569847)
chr8 (158-284)||(33727823-33727949)
chr8 (158-219)||(29956346-29956407)
chr8 (165-253)||(3305145-3305233)
chr8 (209-284)||(6436556-6436631)
chr8 (153-284)||(11518822-11518953)
chr8 (158-285)||(28783059-28783186)
chr8 (204-287)||(35641897-35641980)
chr8 (160-286)||(13129666-13129792)
chr8 (158-284)||(26688865-26688991)
chr8 (169-242)||(6536562-6536635)
chr8 (209-286)||(18897164-18897241)
chr8 (157-234)||(27871718-27871795)
chr8 (158-215)||(27979226-27979283)
chr8 (158-215)||(28036495-28036552)
chr8 (182-231)||(37663960-37664009)
chr8 (217-285)||(4830486-4830554)
chr8 (165-229)||(13456468-13456532)
chr8 (203-251)||(24675507-24675555)
chr8 (160-244)||(31408074-31408158)
chr8 (192-284)||(43968982-43969074)
[»] scaffold0211 (1 HSPs)
scaffold0211 (169-284)||(24053-24168)
[»] scaffold0002 (2 HSPs)
scaffold0002 (158-281)||(94923-95044)
scaffold0002 (160-284)||(459883-460007)
[»] scaffold0180 (1 HSPs)
scaffold0180 (156-273)||(19911-20027)
[»] scaffold0004 (1 HSPs)
scaffold0004 (158-241)||(81514-81597)
[»] scaffold0118 (1 HSPs)
scaffold0118 (158-284)||(41583-41709)
[»] scaffold0070 (1 HSPs)
scaffold0070 (159-284)||(42472-42596)
[»] scaffold0008 (1 HSPs)
scaffold0008 (159-254)||(49336-49431)
[»] scaffold0318 (1 HSPs)
scaffold0318 (165-231)||(10623-10688)
[»] scaffold0122 (1 HSPs)
scaffold0122 (165-277)||(6879-6988)
[»] scaffold0300 (1 HSPs)
scaffold0300 (165-276)||(4348-4459)
[»] scaffold0258 (1 HSPs)
scaffold0258 (157-284)||(15272-15399)
[»] scaffold0115 (1 HSPs)
scaffold0115 (162-237)||(42618-42693)
[»] scaffold0102 (1 HSPs)
scaffold0102 (165-284)||(17062-17180)
[»] scaffold0126 (1 HSPs)
scaffold0126 (165-263)||(25304-25402)
[»] scaffold0074 (1 HSPs)
scaffold0074 (158-242)||(45709-45793)


Alignment Details
Target: chr3 (Bit Score: 350; Significance: 0; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 11 - 428
Target Start/End: Original strand, 11642012 - 11642429
Alignment:
Q  11 cacagacactggttgttcacacaagtactaccttctttgtaataacaaattttttgacaacctatgtgcacaacacctccttctcttgcttcagatttaa 110  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11642012 cacagacactggttgttaacacaagtactaccttctttgtaataacaaattttttgacaacctatatgcacaacacctccttctcttgcttcagatttaa 11642111  T
Q  111 tgtacatatctgcatatatacacaaattatattaaacttttggaacattttttattttgaagaagttaaactaacccactcaaattagcactagagataa 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| || |||||  ||||| ||||||    
T  11642112 tgtacatatctgcatatatacacaaattatattaaacttttggaacaatttttgttttgaagaagctaaactaaccctcttaaattgacactaaagataa 11642211  T
Q  211 tcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtttagacatttggaacattaattagaga 310  Q
    ||||| |||||| |||||||||||||||| ||||| ||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  11642212 tcgaacctgagaccttgaggaggatcacaatctcagatcccaagtttataccagtaggccaatccaagtgggtttagacatttggaacattaattagaga 11642311  T
Q  311 acaacattgtaagtaaaaaatttgaaactaaatcaattagttgaagtgaaaaataacaatgtgataagaaattcacttattaattaacttctgacctgaa 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11642312 acaacattgtaagtaaaaaatttgaaactaaatcaattagttgaagtgaaaaataacaatgtgataagaaattcacttattaattaacttctgacctgaa 11642411  T
Q  411 agaatgaaggaaaaaagt 428  Q
    ||||||||||||||||||    
T  11642412 agaatgaaggaaaaaagt 11642429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 160 - 285
Target Start/End: Original strand, 15048013 - 15048138
Alignment:
Q  160 ttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctat 259  Q
    |||| |||| |||||||||||||||||| |||||||| |||| ||||||||||||| |||||| ||||||||||| |||| || || |||||||| ||||    
T  15048013 ttttctttttaagaagttaaactaaccccctcaaattggcaccagagataatcgaacctgagaccttgaggaggagcacattcccagatcccaagcctat 15048112  T
Q  260 accaataggccaacccaagtgggttt 285  Q
    |||| || ||||||||||||||||||    
T  15048113 accattaagccaacccaagtgggttt 15048138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 165 - 286
Target Start/End: Complemental strand, 30311425 - 30311304
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    ||||||||||| ||||||||||| |||||||| |||| | ||| ||||||| |||||| ||||||||||| ||||||| || |||||||| ||||||||     
T  30311425 ttttgaagaagctaaactaaccccctcaaattggcaccaaagagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcctataccac 30311326  T
Q  265 taggccaacccaagtgggttta 286  Q
    |||||||||||| |||||||||    
T  30311325 taggccaacccaggtgggttta 30311304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 158 - 285
Target Start/End: Complemental strand, 46518754 - 46518627
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||||| ||||||||||| |||||||| |||  ||||| |||| || |||| | ||||||||||| ||||||| || |||||||| |     
T  46518754 tttttttttttgaagaagctaaactaaccccctcaaattggcatcagagagaatcaaacctgaaaccttgaggaggagcacactcccagatcccaagcca 46518655  T
Q  258 ataccaataggccaacccaagtgggttt 285  Q
    |||||| || ||||||||||||||||||    
T  46518654 ataccactatgccaacccaagtgggttt 46518627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 165 - 285
Target Start/End: Original strand, 27093319 - 27093438
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    ||||||||||| |||||||||||  ||||||| |||| ||||| |||| || |||||| ||||||||||| ||||||| ||| | ||||| | ||||||     
T  27093319 ttttgaagaagataaactaaccct-tcaaattggcaccagagagaatcaaacctgagaccttgaggaggagcacactcccaagttccaagccaataccac 27093417  T
Q  265 taggccaacccaagtgggttt 285  Q
    |||||||||||||||||||||    
T  27093418 taggccaacccaagtgggttt 27093438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 165 - 284
Target Start/End: Original strand, 10445096 - 10445216
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtcta-tacca 263  Q
    ||||||||||| |||| || ||||||||||||||||| ||||| ||||||| |||||| || |||||||| ||||||| ||  ||||||| | | | |||    
T  10445096 ttttgaagaagctaaattagcccactcaaattagcaccagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaattgcca 10445195  T
Q  264 ataggccaacccaagtgggtt 284  Q
     ||||||||||||||||||||    
T  10445196 ctaggccaacccaagtgggtt 10445216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 160 - 284
Target Start/End: Original strand, 37788418 - 37788541
Alignment:
Q  160 ttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctat 259  Q
    |||| |||| |||||| |||| |||||| |||||||| |||||||||| ||||||| |||||| ||||||||||| |||||||  |  | ||||||| ||    
T  37788418 ttttttttttaagaagctaaattaaccc-ctcaaattggcactagagagaatcgaacctgagaccttgaggaggagcacactcctaggttccaagtcaat 37788516  T
Q  260 accaataggccaacccaagtgggtt 284  Q
    |||| | ||||||||||||||||||    
T  37788517 accactgggccaacccaagtgggtt 37788541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 158 - 277
Target Start/End: Original strand, 8075077 - 8075196
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||||| |||| || ||||| ||||||  ||||||||  ||||||| |||| | ||||||||||| ||||||| ||| ||||||| ||    
T  8075077 tttttttttttgaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgaaaccttgaggaggagcacactcccaagtcccaagcct 8075176  T
Q  258 ataccaataggccaacccaa 277  Q
    |||||| |||| ||||||||    
T  8075177 ataccactagggcaacccaa 8075196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 277
Target Start/End: Complemental strand, 2667987 - 2667869
Alignment:
Q  159 tttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtcta 258  Q
    ||||| ||||||||||| ||||||| |||||  |||||  ||||||||||||||||| |||||| || ||||| || ||||||| || |||||||| | |    
T  2667987 ttttttttttgaagaagctaaactagcccacctaaattgacactagagataatcgaacctgagacctcgaggaagagcacactcccagatcccaagccaa 2667888  T
Q  259 taccaataggccaacccaa 277  Q
    |||||  ||||||||||||    
T  2667887 taccaccaggccaacccaa 2667869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 158 - 284
Target Start/End: Complemental strand, 4222267 - 4222141
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| |||| |||||||||||||||| |||  |||||  ||| ||||| ||||||| || |||  |||||||||| ||||||| || |||||||| |     
T  4222267 ttttttttttttaagaagttaaactaactcacctaaattgacaccagagagaatcgaacctaagactttgaggaggagcacactcccagatcccaagcca 4222168  T
Q  258 ataccaataggccaacccaagtgggtt 284  Q
    |||||| || |||||||||||||||||    
T  4222167 ataccactaagccaacccaagtgggtt 4222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 158 - 280
Target Start/End: Original strand, 45699878 - 45700000
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| |||| ||||||||||| || |||||| ||||| ||||  |||| |||||||||| | |  || ||||||| ||||||||||| |||||| ||     
T  45699878 ttttttttttttaagaagttaaattagcccacttaaattggcacacgagagaatcgaatctcaaactttaaggaggagcacactctcaagtcccaaatca 45699977  T
Q  258 ataccaataggccaacccaagtg 280  Q
    |||||||||||||||| ||||||    
T  45699978 ataccaataggccaacacaagtg 45700000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 173 - 286
Target Start/End: Original strand, 32651403 - 32651515
Alignment:
Q  173 aagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaa 272  Q
    ||||||||||| ||||   |||||  ||||||||| |||||||||||||||||||||||||| ||||||| ||  ||||||| | |||||| ||||||||    
T  32651403 aagttaaactagcccatctaaattgacactagagagaatcgaatctgagatcttgaggaggagcacactcccaggtcccaagccaataccactaggccaa 32651502  T
Q  273 cccaagtgggttta 286  Q
     | |||||||||||    
T  32651503 -ctaagtgggttta 32651515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 158 - 242
Target Start/End: Original strand, 3427504 - 3427587
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactc 242  Q
    |||||| ||||||||||| |||||||||   |||||||| |||||||||| |||||||||||||| ||||||||||| |||||||    
T  3427504 tttttttttttgaagaagctaaactaactg-ctcaaattggcactagagagaatcgaatctgagaccttgaggaggagcacactc 3427587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 158 - 254
Target Start/End: Original strand, 44743805 - 44743901
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaag 254  Q
    |||||| || |||||||| |||| |||||||| |||||| ||||| |||||||||||| |||||| || |||||||| ||||||| || ||||||||    
T  44743805 tttttttttgtgaagaagctaaattaacccacccaaattggcactggagataatcgaacctgagacctcgaggaggagcacactcccagatcccaag 44743901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 46553057 - 46552986
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgag 229  Q
    |||||| ||||||||||  ||||||||||||| |||||| |||||||||| |||||||||||||| ||||||    
T  46553057 tttttttttttgaagaaactaaactaacccacccaaattggcactagagagaatcgaatctgagaccttgag 46552986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 158 - 284
Target Start/End: Original strand, 26505311 - 26505437
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||||||||||||||||| || ||||| | || ||||| |||  || || ||||||||| ||||| ||||||  || |||||||| ||    
T  26505311 ttttttgttttgaagaagttaaactaaccccctgaaattggtaccagagagaattcaacctcagatcttgaagaggagcacacttccatatcccaagcct 26505410  T
Q  258 ataccaataggccaacccaagtgggtt 284  Q
    |||||| | | |||| |||||||||||    
T  26505411 ataccactggaccaatccaagtgggtt 26505437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 158 - 284
Target Start/End: Original strand, 51903828 - 51903954
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||||| |||| || ||||||||||||  |||  |||| ||||||| |||||| |  |||||||| ||||||| || |||||||| |     
T  51903828 tttttttttttgaagaagctaaattagcccactcaaattgacaccggagagaatcgaacctgagaccacgaggaggagcacactcccagatcccaagcca 51903927  T
Q  258 ataccaataggccaacccaagtgggtt 284  Q
    ||||||| ||| ||||||| |||||||    
T  51903928 ataccaacaggtcaacccaggtgggtt 51903954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 284
Target Start/End: Complemental strand, 14339735 - 14339610
Alignment:
Q  159 tttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtcta 258  Q
    ||||| ||||||||||| |||| || |||||   |||| ||||||| || ||||||| ||||||  |||||||||| ||||||| ||||||||||| | |    
T  14339735 ttttttttttgaagaagctaaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaaatcccaagccaa 14339636  T
Q  259 taccaataggccaacccaagtgggtt 284  Q
    |||||  ||||||| |||| ||||||    
T  14339635 taccaccaggccaatccaactgggtt 14339610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 158 - 279
Target Start/End: Original strand, 34928891 - 34929012
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| |||| ||||||||||| |||| | || ||||||||| |||||| |||||||||||||| ||| ||||||| || |||||||  ||| |||||     
T  34928891 ttttttttttttaagaagttaaattaactctcttaaattagcattagagagaatcgaatctgagaccttaaggaggagcatactctcaggtcctaagtcc 34928990  T
Q  258 ataccaataggccaacccaagt 279  Q
    ||| || |||  ||||||||||    
T  34928991 atatcactagatcaacccaagt 34929012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 284
Target Start/End: Complemental strand, 40063744 - 40063619
Alignment:
Q  160 ttttattttgaagaagttaaactaa-cccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtcta 258  Q
    |||| ||||||||||| |||||||| ||| |||||||| ||||| |||| |||||||  ||||| ||| ||||||| || ||||||| |||||||| | |    
T  40063744 tttttttttgaagaagctaaactaaaccccctcaaattggcactggagagaatcgaacttgagaccttaaggaggagcatactctcagatcccaagccaa 40063645  T
Q  259 taccaataggccaacccaagtgggtt 284  Q
    ||| | || | |||||||||||||||    
T  40063644 tactactaagtcaacccaagtgggtt 40063619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 158 - 286
Target Start/End: Complemental strand, 36720507 - 36720379
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| |||| |||||| ||||| | |||||  |||||  ||||||||| ||||||| |||| | || |||||||| ||||||| || |||||||| |     
T  36720507 ttttttttttttaagaagctaaaccagcccacctaaattgacactagagagaatcgaacctgaaacctcgaggaggagcacactcccatatcccaagcca 36720408  T
Q  258 ataccaataggccaacccaagtgggttta 286  Q
    ||||||  || ||||||||||||||||||    
T  36720407 ataccaccagaccaacccaagtgggttta 36720379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 285
Target Start/End: Original strand, 31520555 - 31520682
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||| ||| |||| || ||||||||||||  |||| |||| |||| || || ||| || |||||||| ||||||| || |||||||| |     
T  31520555 ttttttgttttgaaaaagctaaattagcccactcaaattgacactggagagaatcaaacctaagacctcgaggaggagcacactcccagatcccaagcca 31520654  T
Q  258 ataccaataggccaacccaagtgggttt 285  Q
    || |||  ||||||||||||||||||||    
T  31520655 atgccaccaggccaacccaagtgggttt 31520682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 165 - 285
Target Start/End: Original strand, 34062505 - 34062627
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggag--gatcacactctcaaatcccaagtctatacc 262  Q
    |||||||||||||||||||||   |||||||| |||| ||||| ||| ||| |||||| |||||||||  || ||||||| |||||  |||| | ||| |    
T  34062505 ttttgaagaagttaaactaacatcctcaaattggcaccagagagaattgaacctgagaccttgaggaggagagcacactcccaaatttcaagccaatatc 34062604  T
Q  263 aataggccaacccaagtgggttt 285  Q
    | | |||||||||||||||||||    
T  34062605 actgggccaacccaagtgggttt 34062627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 170 - 284
Target Start/End: Original strand, 28703366 - 28703480
Alignment:
Q  170 aagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggc 269  Q
    |||||| ||||||||||  |||||||| |||| ||||| ||||||| |||||| ||||| ||||| ||||||| || ||||||||   ||| || | | |    
T  28703366 aagaagctaaactaacctcctcaaattggcaccagagagaatcgaacctgagaccttgaagaggagcacactcccagatcccaagctaatatcactggac 28703465  T
Q  270 caacccaagtgggtt 284  Q
    |||||||||||||||    
T  28703466 caacccaagtgggtt 28703480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 43243415 - 43243480
Alignment:
Q  157 attttttattttgaagaagttaaactaacccactcaaattagcactagaga-taatcgaatctgaga 222  Q
    ||||||||||| ||||||||||||||||||| |||||||||| ||||||||  ||||||||||||||    
T  43243415 attttttattt-gaagaagttaaactaaccccctcaaattagtactagagagaaatcgaatctgaga 43243480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 284
Target Start/End: Complemental strand, 8170797 - 8170672
Alignment:
Q  159 tttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtcta 258  Q
    ||||| |||||||||| ||||| || ||||| ||||||  ||| ||||  ||||||| |||||| |||||| |||| ||||||| ||| |  |||| | |    
T  8170797 ttttttttttgaagaatttaaattagcccacccaaattgacaccagaggaaatcgaacctgagaccttgagtaggagcacactcccaagtttcaagccaa 8170698  T
Q  259 taccaataggccaacccaagtgggtt 284  Q
    ||||| ||||||||||||| ||||||    
T  8170697 taccactaggccaacccaaatgggtt 8170672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 283
Target Start/End: Original strand, 47454567 - 47454692
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||||| |||||||||||||  ||||| ||| | | || ||||||| |||||| || |||||||| |||||||  | ||| |||| |     
T  47454567 tttttttttttgaagaagctaaactaacccacctaaattggcattggggagaatcgaacctgagacctcgaggaggagcacactccaagatctcaagcca 47454666  T
Q  258 ataccaataggccaacccaagtgggt 283  Q
    |||||| |||  ||||||||||||||    
T  47454667 ataccactagaacaacccaagtgggt 47454692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 284
Target Start/End: Complemental strand, 203182 - 203090
Alignment:
Q  192 aaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    |||||| ||||||||||||||||| || | | ||| ||||  | ||||||| |  |||||||||| |||||| ||||||||||||||||||||    
T  203182 aaattaccactagagataatcgaacctcaaaccttaaggaaaagcacactccctgatcccaagtcaataccactaggccaacccaagtgggtt 203090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 285
Target Start/End: Complemental strand, 7975551 - 7975417
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaat-------ctgagatcttgaggaggatcacactctcaaatcc 250  Q
    |||||| ||||||||||| ||||||||||| |||||||| |||| ||||| || | ||        || ||| ||||||||||| ||||||| || ||||    
T  7975551 tttttttttttgaagaaggtaaactaaccccctcaaattggcaccagagagaaactaagttaaaacctaagaccttgaggaggagcacactcccagatcc 7975452  T
Q  251 caagtctataccaataggccaacccaagtgggttt 285  Q
    |||| |||||||| |||||||||| || |||||||    
T  7975451 caagcctataccactaggccaacctaaatgggttt 7975417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 284
Target Start/End: Complemental strand, 14186727 - 14186648
Alignment:
Q  204 gagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    |||| ||||||| |||||| ||||||||||| ||||||| ||  ||||||| | |||||| ||||||||||||||||||||    
T  14186727 gagagaatcgaacctgagaccttgaggaggagcacactc-caggtcccaagacaataccactaggccaacccaagtgggtt 14186648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 284
Target Start/End: Original strand, 16354851 - 16354968
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    ||||||||||| ||||||| |||  | || || |||| ||||| ||||||| |||||| | ||||||||| ||||||| ||  | ||||| | ||||||     
T  16354851 ttttgaagaagctaaactacccc--ttaatttggcaccagagagaatcgaacctgagaccctgaggaggagcacactcacaggttccaagccaataccac 16354948  T
Q  265 taggccaacccaagtgggtt 284  Q
    ||||||||||||||||||||    
T  16354949 taggccaacccaagtgggtt 16354968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 284
Target Start/End: Original strand, 31788935 - 31789046
Alignment:
Q  172 gaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggcca 271  Q
    |||||||||||| ||||| ||||||  ||| |||||||||| || || | | || |||||||| ||||||| || |||||||| | ||| || |||||||    
T  31788935 gaagttaaactagcccacccaaattgacac-agagataatcaaacctaaaacctcgaggaggagcacactcccagatcccaagccaataacactaggcca 31789033  T
Q  272 acccaagtgggtt 284  Q
    |||||||||||||    
T  31789034 acccaagtgggtt 31789046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 53413052 - 53412948
Alignment:
Q  177 taaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaaccca 276  Q
    ||||||||||| |||||||| |||| ||||| ||| ||| |||||| ||||||||||| ||||||| ||  |  |||| | |||||| ||| ||||||||    
T  53413052 taaactaaccccctcaaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcccaggttacaagccaataccactagaccaaccca 53412953  T
Q  277 agtgg 281  Q
    |||||    
T  53412952 agtgg 53412948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 19341863 - 19341801
Alignment:
Q  222 atcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    ||||||||||||| ||||||| ||| || ||||||||||||| |||| |||||||| ||||||    
T  19341863 atcttgaggaggagcacactcccaagtctcaagtctataccactagggcaacccaaatgggtt 19341801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 285
Target Start/End: Original strand, 5499427 - 5499484
Alignment:
Q  228 aggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggttt 285  Q
    ||||||| |||||||||| ||| |||||| ||||||  ||||||||||||||||||||    
T  5499427 aggaggagcacactctcagatctcaagtcaataccaccaggccaacccaagtgggttt 5499484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 157 - 285
Target Start/End: Complemental strand, 19154758 - 19154630
Alignment:
Q  157 attttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtc 256  Q
    ||||||| |||| |||||  ||||||||||||| ||||||  ||  | ||| ||||||| |||||| ||| ||||||| ||||||||||   | |||| |    
T  19154758 attttttttttttaagaaactaaactaacccacccaaattgacatcaaagagaatcgaacctgagacctttaggaggagcacactctcaggcctcaagcc 19154659  T
Q  257 tataccaataggccaacccaagtgggttt 285  Q
     |||| | ||||||||||||| |||||||    
T  19154658 aatacaactaggccaacccaaatgggttt 19154630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 285
Target Start/End: Complemental strand, 9557394 - 9557319
Alignment:
Q  210 atcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggttt 285  Q
    |||||| ||||||||| |||||||| |||||||||| |||||||| | |||| |  |||||| | |||||||||||    
T  9557394 atcgaacctgagatctcgaggaggagcacactctcagatcccaagccaatactatcaggccagctcaagtgggttt 9557319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 286
Target Start/End: Complemental strand, 39253778 - 39253696
Alignment:
Q  203 agagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggttta 286  Q
    ||||| ||||||| |||||| ||||| ||||| ||||||| || |||||||||||| |||| |||| ||||| |||||| ||||    
T  39253778 agagagaatcgaacctgagaccttgaagaggagcacactcccagatcccaagtcta-accactaggtcaacctaagtggattta 39253696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 284
Target Start/End: Original strand, 37051252 - 37051370
Alignment:
Q  166 tttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaat 265  Q
    |||||||||| ||||||||||| |||||||  |  | ||||| ||||||| ||||||  || ||||||| ||||||| || ||||||| || ||| || |    
T  37051252 tttgaagaagctaaactaaccccctcaaatcggtgcaagagagaatcgaacctgagactttaaggaggaacacactcccagatcccaaatcaatatcact 37051351  T
Q  266 aggccaacccaagtgggtt 284  Q
    |   |||||||||||||||    
T  37051352 aaatcaacccaagtgggtt 37051370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 285
Target Start/End: Original strand, 10499061 - 10499186
Alignment:
Q  160 ttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctat 259  Q
    |||| ||||||||||| |||| || ||||| ||||||  ||   |||| ||||||| |||||| ||  |||| || || |||| || |||||||| | ||    
T  10499061 tttttttttgaagaagctaaattagcccacccaaattgacatcggagagaatcgaacctgagacctcaaggaagagcagactcccagatcccaagccaat 10499160  T
Q  260 accaataggccaacccaagtgggttt 285  Q
    ||||  ||||||||||||||||||||    
T  10499161 accaccaggccaacccaagtgggttt 10499186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 10969867 - 10969936
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttg 227  Q
    |||||| ||| ||||||| ||||||||||| || ||||| |||| ||||| ||||||| |||||| ||||    
T  10969867 ttttttttttggaagaagctaaactaacccccttaaattggcaccagagagaatcgaacctgagaccttg 10969936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 231
Target Start/End: Original strand, 17155061 - 17155101
Alignment:
Q  191 caaattagcactagagataatcgaatctgagatcttgagga 231  Q
    |||||| |||| ||||| |||||||||||||||||||||||    
T  17155061 caaattggcaccagagagaatcgaatctgagatcttgagga 17155101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 284
Target Start/End: Complemental strand, 21960631 - 21960551
Alignment:
Q  204 gagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    |||| |||||||||||||| || |||||||| ||||||||||  ||||||| | ||||||  ||  |||||||| ||||||    
T  21960631 gagagaatcgaatctgagacctcgaggaggagcacactctcaggtcccaagccaataccaccagcgcaacccaattgggtt 21960551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 160 - 284
Target Start/End: Complemental strand, 18363819 - 18363696
Alignment:
Q  160 ttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctat 259  Q
    |||| ||||||||||| ||||||||||| |||||||| | |||||||| |||| || |||||| ||||||||||| ||||||| |||||| |||| ||||    
T  18363819 tttttttttgaagaagctaaactaaccc-ctcaaattggtactagagagaatcaaacctgagaccttgaggaggagcacactcccaaatctcaagcctat 18363721  T
Q  260 accaataggccaacccaagtgggtt 284  Q
    |||| ||||||||||||||||||||    
T  18363720 accactaggccaacccaagtgggtt 18363696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 158 - 284
Target Start/End: Original strand, 26459360 - 26459486
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||||| |||||||||||  ||||||| |||| ||||| ||||||| |||||| ||||||||||| ||||||| ||  ||||||| |     
T  26459360 tttttttttttgaagaagctaaactaaccccttcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagcca 26459459  T
Q  258 ataccaataggccaacccaagtgggtt 284  Q
    |||||| ||||||||||||||||||||    
T  26459460 ataccactaggccaacccaagtgggtt 26459486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 158 - 285
Target Start/End: Original strand, 25655178 - 25655305
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||||| ||||| |||||  ||||||| |||| ||||| ||||||| |||| | ||||||||||||||||||| || ||||||||||     
T  25655178 tttttttttttgaagaagctaaaccaaccccttcaaattggcaccagagagaatcgaacctgaaaccttgaggaggatcacactcacagatcccaagtca 25655277  T
Q  258 ataccaataggccaacccaagtgggttt 285  Q
    |||||| ||  |||||||| ||||||||    
T  25655278 ataccactaaaccaacccaggtgggttt 25655305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 165 - 284
Target Start/End: Complemental strand, 39631963 - 39631844
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    ||||||||||| ||||||||||| |||||||| |||| ||||| ||||||| |||||| ||||||||||| |  |||| ||  ||||||| | ||||||     
T  39631963 ttttgaagaagctaaactaaccccctcaaattggcacaagagagaatcgaacctgagaccttgaggaggagcttactcccaggtcccaagccaataccac 39631864  T
Q  265 taggccaacccaagtgggtt 284  Q
    ||||||||||||||||||||    
T  39631863 taggccaacccaagtgggtt 39631844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 166 - 284
Target Start/End: Original strand, 23301560 - 23301678
Alignment:
Q  166 tttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaat 265  Q
    ||||||||||||||| ||  |||||||||||||||||| ||| |||| ||  ||||| ||  ||||||| ||||||| ||| ||||||||| ||||||      
T  23301560 tttgaagaagttaaattagtccactcaaattagcactaaagagaatcaaacttgagacctcaaggaggagcacactcccaagtcccaagtcaataccacc 23301659  T
Q  266 aggccaacccaagtgggtt 284  Q
    |||||||||||||||||||    
T  23301660 aggccaacccaagtgggtt 23301678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 158 - 263
Target Start/End: Original strand, 9608579 - 9608684
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||||| ||||| ||||  ||||||||  ||||||||| ||||||| ||||||||||||||||||  |||||| || |||||||| ||    
T  9608579 tttttttttttgaagaagctaaaccaacctcctcaaattgacactagagagaatcgaacctgagatcttgaggaggaggacactcccagatcccaagcct 9608678  T
Q  258 atacca 263  Q
    ||||||    
T  9608679 atacca 9608684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 158 - 263
Target Start/End: Original strand, 9836151 - 9836256
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||||| ||||| ||||  ||||||||  ||||||||| ||||||| ||||||||||||||||||  |||||| || |||||||| ||    
T  9836151 tttttttttttgaagaagctaaaccaacctcctcaaattgacactagagagaatcgaacctgagatcttgaggaggaggacactcccagatcccaagcct 9836250  T
Q  258 atacca 263  Q
    ||||||    
T  9836251 atacca 9836256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 165 - 286
Target Start/End: Original strand, 17040969 - 17041090
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    ||||||||||| |||| | |||||| |||||| ||||| |||| ||||||| |||||| ||||||||||| ||||||  || |||||||| | || |||     
T  17040969 ttttgaagaagctaaattgacccacccaaattggcacttgagagaatcgaacctgagaccttgaggaggagcacacttccagatcccaagccaatgccac 17041068  T
Q  265 taggccaacccaagtgggttta 286  Q
    ||| ||||||||||||||||||    
T  17041069 tagaccaacccaagtgggttta 17041090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 160 - 285
Target Start/End: Complemental strand, 43215308 - 43215183
Alignment:
Q  160 ttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctat 259  Q
    |||| |||| |||||| ||||||||||| |||||||| |||  ||||| ||||||| |||||| ||||||||||| |||||||  |  ||||||| | ||    
T  43215308 ttttttttttaagaagctaaactaaccccctcaaattggcataagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaat 43215209  T
Q  260 accaataggccaacccaagtgggttt 285  Q
    |||| ||| |||||||||||||||||    
T  43215208 accactagaccaacccaagtgggttt 43215183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 165 - 285
Target Start/End: Complemental strand, 35119502 - 35119382
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    ||||||||||| |||||||| || |||||||| ||| || ||| ||||||| |||| |||||||||| || || || | || |||||||||| ||||||     
T  35119502 ttttgaagaagataaactaatcctctcaaattggcattaaagagaatcgaacctgaaatcttgaggatgagcatacacccagatcccaagtcaataccac 35119403  T
Q  265 taggccaacccaagtgggttt 285  Q
    ||||||||||||| |||||||    
T  35119402 taggccaacccaaatgggttt 35119382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 158 - 285
Target Start/End: Original strand, 33181160 - 33181287
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| |||| |||||| |||| || ||||| ||||||  ||||||||  ||||||| |||||||||||||  ||| ||||||| ||| ||||||| ||    
T  33181160 ttttttttttttaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagatcttgagttggagcacactcccaagtcccaagcct 33181259  T
Q  258 ataccaataggccaacccaagtgggttt 285  Q
    |||||| |||| |||||||| |||||||    
T  33181260 ataccactagggcaacccaaatgggttt 33181287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 158 - 284
Target Start/End: Complemental strand, 15137679 - 15137553
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||||  |||| || ||||| ||||||  ||| ||||| |||| || |||||| ||||||||||| |||||||  ||||||||||||     
T  15137679 tttttttttttgaagaaactaaattagcccacccaaattgacaccagagagaatctaacctgagaccttgaggaggagcacactcctaaatcccaagtca 15137580  T
Q  258 ataccaataggccaacccaagtgggtt 284  Q
     |||||  |||||||||||||||||||    
T  15137579 gtaccaccaggccaacccaagtgggtt 15137553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 158 - 284
Target Start/End: Complemental strand, 37094875 - 37094749
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| |||| || ||| |||||||||||  |||||||||||||||||| |||| ||| ||||| ||||||||||||||||||  || |||||||  ||    
T  37094875 ttttttttttttaaaaagctaaactaaccccttcaaattagcactagagagaatcaaatgtgagaccttgaggaggatcacacttccagatcccaaacct 37094776  T
Q  258 ataccaataggccaacccaagtgggtt 284  Q
    ||| || || |||||  ||||||||||    
T  37094775 atatcactatgccaattcaagtgggtt 37094749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 2962585 - 2962501
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactc 242  Q
    |||||| ||||||||||||||||||||| | |||||||| |  | ||||| ||||||| |||||||||||||||||| |||||||    
T  2962585 tttttttttttgaagaagttaaactaactccctcaaattggttccagagagaatcgaacctgagatcttgaggaggagcacactc 2962501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 7744062 - 7744186
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| |||| |||||| |||||| |||| |||||||| |||| ||||| |||| || |||||| ||||||||||| || | || || |||| ||| ||    
T  7744062 ttttttttttttaagaagctaaactgaccccctcaaatttgcaccagagagaatcaaacctgagaccttgaggaggagcatagtcccagatcctaagcct 7744161  T
Q  258 ataccaataggccaacccaagtggg 282  Q
    |||||| |||||||||| |||||||    
T  7744162 ataccactaggccaacctaagtggg 7744186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 41519217 - 41519335
Alignment:
Q  160 ttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctat 259  Q
    |||| ||||||||||| |||| || |||||  |||||  ||| ||||| || |||| |||||| ||||||||||| |||||||  |||||||||||| ||    
T  41519217 tttttttttgaagaagctaaattagcccacctaaattgacac-agagagaagcgaacctgagaccttgaggaggagcacactcctaaatcccaagtcaat 41519315  T
Q  260 accaataggccaacccaagt 279  Q
    |||| |||||||||||||||    
T  41519316 accactaggccaacccaagt 41519335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 157 - 284
Target Start/End: Complemental strand, 43591034 - 43590907
Alignment:
Q  157 attttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtc 256  Q
    ||||||| ||||||||||| |||| || |||||   |||| ||||||| || ||||||| ||||||  |||||||||| ||||||| ||| ||||||| |    
T  43591034 atttttttttttgaagaagctaaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaagtcccaagcc 43590935  T
Q  257 tataccaataggccaacccaagtgggtt 284  Q
     ||||||  |||||||||||| ||||||    
T  43590934 aataccaccaggccaacccaactgggtt 43590907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 165 - 283
Target Start/End: Original strand, 2495793 - 2495911
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    |||| ||||||||||| ||||||| | |||||   | |||||||||||||| ||||||| || ||||||| ||||||| |||||| |||||| |||  |     
T  2495793 tttttaagaagttaaattaacccatttaaattgatattagagataatcgaacctgagattttaaggaggagcacactcacaaatctcaagtcaatattat 2495892  T
Q  265 taggccaacccaagtgggt 283  Q
    ||||||||| |||||||||    
T  2495893 taggccaactcaagtgggt 2495911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 158 - 255
Target Start/End: Original strand, 21569982 - 21570079
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagt 255  Q
    |||||| |||| || ||||||||||||||| ||||||||  ||| ||||| |||||||  ||||| ||||||||||| | ||||||||| ||||||||    
T  21569982 ttttttttttttaacaagttaaactaaccccctcaaattgacaccagagaaaatcgaacttgagaccttgaggaggagcgcactctcaagtcccaagt 21570079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 192 - 285
Target Start/End: Complemental strand, 23552210 - 23552117
Alignment:
Q  192 aaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggttt 285  Q
    ||||| ||| |||||| |||||||  ||||| ||||||||||| ||||||| ||  ||||||||| ||| || |||||||||||||||||||||    
T  23552210 aaattggcattagagagaatcgaacttgagaccttgaggaggagcacactcccaggtcccaagtcaatagcactaggccaacccaagtgggttt 23552117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 158 - 263
Target Start/End: Original strand, 29785251 - 29785356
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| |||| |||||| ||||||||||| |||||||| |||| ||| | |||||||  ||||| ||||||||||| ||||||  || |||||||| ||    
T  29785251 ttttttttttttaagaagctaaactaaccccctcaaattggcaccagaaagaatcgaacatgagaccttgaggaggagcacacttccagatcccaagcct 29785350  T
Q  258 atacca 263  Q
    ||||||    
T  29785351 atacca 29785356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 204 - 285
Target Start/End: Original strand, 45709704 - 45709785
Alignment:
Q  204 gagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggttt 285  Q
    |||||||||||| |||||| || |||||||| |||||||||| ||||||||   |||||| ||||||||||||| |||||||    
T  45709704 gagataatcgaacctgagacctcgaggaggagcacactctcagatcccaagctaataccactaggccaacccaaatgggttt 45709785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 285
Target Start/End: Complemental strand, 2446435 - 2446307
Alignment:
Q  157 attttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtc 256  Q
    ||||||| ||||||||||| |||| || |||||  ||||  ||||  |||| |||||||  |||||||| |||||||| ||||||| ||| ||||||| |    
T  2446435 atttttttttttgaagaagctaaattagcccacctaaatcggcaccggagagaatcgaacttgagatctcgaggaggagcacactcccaagtcccaagcc 2446336  T
Q  257 tataccaataggccaacccaagtgggttt 285  Q
     ||||||  || |||||||||||||||||    
T  2446335 aataccatcagaccaacccaagtgggttt 2446307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 41519072 - 41519183
Alignment:
Q  170 aagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggc 269  Q
    |||||| |||| || ||||| ||||||  |||  ||||||||||||||||||| |||||| |||| |||||||| |||||||||| |  || || |||||    
T  41519072 aagaagctaaattagcccacccaaattgacaccggagataatcgaatctgagaccttgagaaggagcacactcttaaatcccaagccagtatcactaggc 41519171  T
Q  270 caacccaagtgg 281  Q
    ||||| ||||||    
T  41519172 caaccaaagtgg 41519183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 158 - 284
Target Start/End: Complemental strand, 25590737 - 25590611
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||||| |||| || ||||||||||||  |||   ||| ||||||| | |||| || |||||||| ||||||| || ||| |||| |     
T  25590737 tttttttttttgaagaagctaaattagcccactcaaattgacaccgaagaaaatcgaacccgagacctcgaggaggagcacactcccagatctcaagcca 25590638  T
Q  258 ataccaataggccaacccaagtgggtt 284  Q
    ||||||| ||| |||||||||||||||    
T  25590637 ataccaacaggtcaacccaagtgggtt 25590611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 263
Target Start/End: Original strand, 36877164 - 36877269
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| |||| ||||||||||| |||| |||| ||| ||||||| |  | ||||||||||| || ||||| ||||| || |||||||| |||||||||     
T  36877164 ttttttttttttaagaagttaaattaacgcacttaaactagcactgggaagaatcgaatctgcgaccttgaagaggagcatactctcaagtcccaagtca 36877263  T
Q  258 atacca 263  Q
    ||||||    
T  36877264 atacca 36877269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 168 - 284
Target Start/End: Complemental strand, 17113911 - 17113795
Alignment:
Q  168 tgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaatag 267  Q
    |||||||| ||||||||||| ||||||||||||  ||||| |||||||  ||||| ||||||||| | ||||||| ||  | | ||| | |||| | |||    
T  17113911 tgaagaagctaaactaaccccctcaaattagcatcagagagaatcgaacttgagaccttgaggagaagcacactcccaggttctaagccaatacaactag 17113812  T
Q  268 gccaacccaagtgggtt 284  Q
    |||| ||||||||||||    
T  17113811 gccaccccaagtgggtt 17113795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 285
Target Start/End: Complemental strand, 30579454 - 30579334
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    ||||||||||| |||| || |||||  ||||| |||| ||||| ||||||| |||||| ||||||||||   |||||| ||  || |||| | ||||||     
T  30579454 ttttgaagaagctaaattagcccacctaaattggcaccagagaaaatcgaacctgagaccttgaggaggtggacactcccaggtctcaagccaataccac 30579355  T
Q  265 taggccaacccaagtgggttt 285  Q
     ||||||||||||||||||||    
T  30579354 caggccaacccaagtgggttt 30579334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 165 - 284
Target Start/End: Original strand, 5273547 - 5273666
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    |||| |||||| ||||||| ||||| |||||| ||||  |||| |||| || || ||| ||||||||||| |||||||| |  ||||||| | | ||||     
T  5273547 tttttaagaagctaaactagcccacccaaattggcaccggagacaatcaaacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccac 5273646  T
Q  265 taggccaacccaagtgggtt 284  Q
     |||||||||||||||||||    
T  5273647 caggccaacccaagtgggtt 5273666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 286
Target Start/End: Original strand, 11720911 - 11721038
Alignment:
Q  159 tttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtcta 258  Q
    ||||| ||||||||||| |||| || ||||| |||||| ||||| | || |||||||||||| | ||| ||||||| |||| || ||  ||||||| | |    
T  11720911 ttttttttttgaagaagctaaattagcccacccaaattggcactggggagaatcgaatctgataccttaaggaggagcacattcccaggtcccaagccaa 11721010  T
Q  259 taccaataggccaacccaagtgggttta 286  Q
    |||||  ||||||||| |||| ||||||    
T  11721011 taccaccaggccaaccgaagttggttta 11721038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 22760938 - 22760863
Alignment:
Q  209 aatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    ||||||| |||||| ||||||||||| ||||||| ||  ||||||||| ||||||  || ||||||||||||||||    
T  22760938 aatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaagtgggtt 22760863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 21558247 - 21558173
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcaca 239  Q
    ||||||||||| |||| ||||||||  ||||| |||| ||||| ||||||| |||||| ||||||||||| ||||    
T  21558247 ttttgaagaagctaaattaacccacctaaattggcaccagagagaatcgaacctgagaccttgaggaggagcaca 21558173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 284
Target Start/End: Complemental strand, 48772064 - 48771938
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| |||| |||||| |||| || |||||  ||||| | ||| | |||||||||| |||||| ||  ||||||| ||||||| || |||||||| |     
T  48772064 ttttttttttttaagaagctaaattagcccacctaaattggtacttgggataatcgaacctgagacctcaaggaggagcacactcccagatcccaagcca 48771965  T
Q  258 ataccaataggccaacccaagtgggtt 284  Q
    ||||||  | |||||||||||||||||    
T  48771964 ataccaccaagccaacccaagtgggtt 48771938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 204 - 281
Target Start/End: Original strand, 20952145 - 20952222
Alignment:
Q  204 gagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgg 281  Q
    |||||||||||||||||||| |||||||||| ||||||| ||  ||||||  | ||||||  ||| ||||||||||||    
T  20952145 gagataatcgaatctgagattttgaggaggagcacactcccaggtcccaaaccaataccatcaggtcaacccaagtgg 20952222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 227 - 284
Target Start/End: Complemental strand, 27776229 - 27776172
Alignment:
Q  227 gaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    |||||||| ||||||||||| |||||||  |||||||  |||||||||||||||||||    
T  27776229 gaggaggagcacactctcaagtcccaagcgtataccaccaggccaacccaagtgggtt 27776172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 242
Target Start/End: Original strand, 9183141 - 9183225
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactc 242  Q
    |||||| ||||||||||  |||| || ||||| ||||||  ||| ||||||||||||| ||||||  |||||||||| |||||||    
T  9183141 tttttttttttgaagaaactaaattagcccacccaaattgacaccagagataatcgaacctgagactttgaggaggagcacactc 9183225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 285
Target Start/End: Complemental strand, 26526408 - 26526289
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    |||| ||||||||||| |||||||  ||||||  |||  |||| |||| || | ||||| |||||||||| ||||||||||||||| ||||| ||||||     
T  26526408 tttttaagaagttaaattaacccatccaaattgacaccggagagaatc-aacccgagattttgaggaggagcacactctcaaatcctaagtcaataccac 26526310  T
Q  265 taggccaacccaagtgggttt 285  Q
     || |||| |||| |||||||    
T  26526309 cagaccaatccaaatgggttt 26526289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 29385693 - 29385817
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| |||||||||||  ||| || ||||| |||||| |||| | ||| |||| || |||||| ||||||||||| |||||||  || ||||||| |     
T  29385693 tttttttttttgaagaagcaaaagtagcccacccaaattggcaccaaagagaatcaaacctgagaccttgaggaggagcacactccaaagtcccaagcca 29385792  T
Q  258 ataccaataggccaacccaagtggg 282  Q
    | ||||   ||||||||||||||||    
T  29385793 acaccatccggccaacccaagtggg 29385817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 42260997 - 42261049
Alignment:
Q  160 ttttattttgaagaagttaaactaacccactcaaattagcactagagataatc 212  Q
    |||||||||||||||| |||||||||||||  ||||| |||||||||| ||||    
T  42260997 ttttattttgaagaagctaaactaacccacctaaattggcactagagagaatc 42261049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 15905624 - 15905746
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||||| |||| |||||||| ||||||  || ||| || ||||||| |||||| | | ||||||| ||||||| ||  ||||||| |     
T  15905624 tttttttttttgaagaagctaaattaacccacccaaattgacattagggagaatcgaacctgaga-cctaaggaggagcacactcccaggtcccaagcca 15905722  T
Q  258 ataccaataggccaacccaagtgg 281  Q
    |||||   ||||||||||||||||    
T  15905723 ataccgccaggccaacccaagtgg 15905746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 20335832 - 20335907
Alignment:
Q  209 aatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    ||||||| |||||| || |||||||| ||||||| ||| ||||||| | |||||  ||| ||||||||||||||||    
T  20335832 aatcgaacctgagacctcgaggaggagcacactcccaagtcccaagccaatacctctagaccaacccaagtgggtt 20335907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 284
Target Start/End: Complemental strand, 24513916 - 24513797
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    |||| ||||||||||| || ||||| ||||||  ||  || || ||||||| |||||| ||  ||||| |  |||||| |||||| |||| | ||||||     
T  24513916 ttttaaagaagttaaattagcccacccaaattgacatcagtgaaaatcgaacctgagacctcaaggagaagtacactcccaaatctcaagccaataccac 24513817  T
Q  265 taggccaacccaagtgggtt 284  Q
    ||||||||||||||||||||    
T  24513816 taggccaacccaagtgggtt 24513797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 25021352 - 25021411
Alignment:
Q  225 ttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    |||||||||| ||||||| ||  ||||||| | |||||| ||||||||||||||||||||    
T  25021352 ttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 25021411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 284
Target Start/End: Complemental strand, 30442612 - 30442488
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||| ||| |||| |||||||| ||||||  | | |||||  |||||| || ||| ||||||||||| || |||| ||  ||||||| |     
T  30442612 tttttttttttgaataagctaaattaacccacccaaattgactccagaga--atcgaacctcagaccttgaggaggagcaaactcccaggtcccaagcca 30442515  T
Q  258 ataccaataggccaacccaagtgggtt 284  Q
    |||||| | ||||||||||||||||||    
T  30442514 ataccactgggccaacccaagtgggtt 30442488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 284
Target Start/End: Complemental strand, 31835311 - 31835192
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    |||| |||||| ||||||| ||| |  ||||| |||| || |||||||||| |||||| ||||||||||| |||||||  |   |||||| | | ||||     
T  31835311 tttttaagaagctaaactagcccgccaaaattggcaccagggataatcgaacctgagaccttgaggaggagcacactccaagcacccaagccaacaccac 31835212  T
Q  265 taggccaacccaagtgggtt 284  Q
     |||||||||||||||||||    
T  31835211 caggccaacccaagtgggtt 31835192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 283
Target Start/End: Complemental strand, 35513546 - 35513467
Alignment:
Q  204 gagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggt 283  Q
    |||| |||||||  |||||| | |||||||| ||||||||||| |||||||   |||||| ||||||||||||| |||||    
T  35513546 gagaaaatcgaacatgagatatcgaggaggagcacactctcaagtcccaagcaaataccactaggccaacccaaatgggt 35513467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 284
Target Start/End: Complemental strand, 26199635 - 26199509
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||||| |||| |||| |||  ||||| ||  ||| || ||||||| |||||||||  | |||||  ||| |||||  ||||||| |     
T  26199635 tttttttttttgaagaagctaaattaactcacctaaattggctgtagggagaatcgaacctgagatctcaaagaggagtacattctcaggtcccaagcca 26199536  T
Q  258 ataccaataggccaacccaagtgggtt 284  Q
    |||||| ||||||||| ||||||||||    
T  26199535 ataccactaggccaactcaagtgggtt 26199509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 33222489 - 33222423
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgagga 231  Q
    ||||||||||  ||||||||||| ||||||||  ||| ||||| ||||||| |||||| ||||||||    
T  33222489 ttttgaagaatctaaactaaccctctcaaattgacaccagagagaatcgaacctgagaccttgagga 33222423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 253
Target Start/End: Original strand, 43633243 - 43633341
Alignment:
Q  155 acattttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaa 253  Q
    ||||||||| ||||||||||| |||| || |||| | |||||  ||| | ||| |||| ||||||| |||||||||||||  ||||| |||| ||||||    
T  43633243 acatttttttttttgaagaagctaaattagcccattgaaattgacacaatagagaatctaatctgacatcttgaggaggagtacactttcaagtcccaa 43633341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 284
Target Start/End: Complemental strand, 7801253 - 7801180
Alignment:
Q  211 tcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    ||||| |||||| ||||| ||||| ||||||| ||  ||||||||| ||||||  ||||||| |||||||||||    
T  7801253 tcgaacctgagaccttgaagaggagcacactcccaggtcccaagtcaataccaccaggccaaaccaagtgggtt 7801180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 246
Target Start/End: Complemental strand, 11700263 - 11700203
Alignment:
Q  185 cccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaa 246  Q
    |||||||||||| |||| ||||| ||||||| |||||| ||||||||||| || ||||||||    
T  11700263 cccactcaaattggcac-agagagaatcgaacctgagaccttgaggaggagcaaactctcaa 11700203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 286
Target Start/End: Original strand, 13106763 - 13106859
Alignment:
Q  189 ctcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggttta 286  Q
    ||||||||||||  ||||| ||||||| |||||| |||||||||||  |||||| || ||||||| || |||| | |||  |||||||| ||||||||    
T  13106763 ctcaaattagcatcagagagaatcgaacctgagaccttgaggaggagtacactc-cagatcccaaatcaatactactagatcaacccaactgggttta 13106859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 285
Target Start/End: Original strand, 18056752 - 18056852
Alignment:
Q  185 cccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    ||||| |||||||||||  | || ||||||| |||||| ||| ||||||| |||||||  ||  |||||||| ||||||  || | ||||||||||||||    
T  18056752 cccacccaaattagcaccggggagaatcgaacctgagaccttcaggaggagcacactccgaagacccaagtcaataccaccagactaacccaagtgggtt 18056851  T
Q  285 t 285  Q
    |    
T  18056852 t 18056852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 42836017 - 42836077
Alignment:
Q  224 cttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    |||||||| || ||||||| ||  ||||||| | |||||| ||||||||||||||||||||    
T  42836017 cttgaggaagagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42836077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 48983683 - 48983755
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgagg 230  Q
    |||||| |||| ||||||||||| || ||||| ||||||  ||||||||  ||||||| |||||| |||||||    
T  48983683 ttttttttttttaagaagttaaattagcccacccaaattgacactagagggaatcgaacctgagaccttgagg 48983755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 166 - 286
Target Start/End: Original strand, 34041546 - 34041666
Alignment:
Q  166 tttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaat 265  Q
    |||||||||| ||||||||||| |||||||| |||| ||||  |||| || |||||| ||||||||||| |||||||||| |||| ||||| |||||| |    
T  34041546 tttgaagaagctaaactaaccccctcaaattggcaccagagggaatcaaacctgagaccttgaggaggagcacactctcagatcctaagtcaataccact 34041645  T
Q  266 aggccaacccaagtgggttta 286  Q
    |||||||||||||||||||||    
T  34041646 aggccaacccaagtgggttta 34041666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 158 - 284
Target Start/End: Original strand, 4438929 - 4439055
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||||| ||||||||||| |||||||| | || ||| | |||||||  || || ||||||||||| |||||||||| |||||||||      
T  4438929 tttttttttttgaagaagctaaactaaccctctcaaattggtaccagaaagaatcgaacatgcgaccttgaggaggagcacactctcagatcccaagtta 4439028  T
Q  258 ataccaataggccaacccaagtgggtt 284  Q
    |||||| ||||||||||||||||||||    
T  4439029 ataccattaggccaacccaagtgggtt 4439055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 159 - 286
Target Start/End: Original strand, 4060165 - 4060292
Alignment:
Q  159 tttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtcta 258  Q
    ||||| ||||||||||| ||||||||||| ||||||||  ||| ||||| ||||||| |||||||||||||||| | ||||||||||  |  |||  | |    
T  4060165 ttttttttttgaagaagctaaactaaccccctcaaattgacaccagagagaatcgaacctgagatcttgaggagaagcacactctcaggtttcaaaccaa 4060264  T
Q  259 taccaataggccaacccaagtgggttta 286  Q
    ||||| ||||||||||||||||||||||    
T  4060265 taccactaggccaacccaagtgggttta 4060292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 161 - 285
Target Start/End: Original strand, 7798989 - 7799112
Alignment:
Q  161 tttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctata 260  Q
    ||||||||||||||| |||| || || ||| ||||| ||||| |||| ||||||||||||||||| |||||||| ||||||| ||| ||||||| | |||    
T  7798989 tttattttgaagaagctaaattagcc-acttaaattggcactggagagaatcgaatctgagatctcgaggaggagcacactcccaagtcccaagccaata 7799087  T
Q  261 ccaataggccaacccaagtgggttt 285  Q
    |||  ||| ||||||||||||||||    
T  7799088 ccaccaggacaacccaagtgggttt 7799112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 165 - 285
Target Start/End: Complemental strand, 14500396 - 14500276
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    |||| |||||| ||||||| ||| |||||||| |||| ||||| |||||||||||||| || |||||||| ||||||| || ||| ||||  |||||||     
T  14500396 tttttaagaagctaaactatccccctcaaattggcaccagagagaatcgaatctgagacctagaggaggagcacactcccagatctcaagcttataccac 14500297  T
Q  265 taggccaacccaagtgggttt 285  Q
    |||||||| ||||||||||||    
T  14500296 taggccaaaccaagtgggttt 14500276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 185 - 284
Target Start/End: Complemental strand, 19244208 - 19244109
Alignment:
Q  185 cccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    |||||||||||| |||| ||||| ||||||| |||||| |||| |||||| ||||||||||  ||||||||| |||||| ||| ||||||||||||||||    
T  19244208 cccactcaaattggcaccagagagaatcgaacctgagaccttggggaggagcacactctcaggtcccaagtcaataccagtagaccaacccaagtgggtt 19244109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 158 - 284
Target Start/End: Original strand, 5147630 - 5147755
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||||| ||||||||||| |||||||| |  | ||||| ||||||||| |||| |||||| |||| || |||| || ||| ||||||     
T  5147630 tttttttttttgaagaagctaaactaaccc-ctcaaattggtgcaagagagaatcgaatccgagaccttgagaaggagcatactcccagatctcaagtca 5147728  T
Q  258 ataccaataggccaacccaagtgggtt 284  Q
    |||||| ||| ||||||||||||||||    
T  5147729 ataccactagaccaacccaagtgggtt 5147755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 210 - 284
Target Start/End: Complemental strand, 35916160 - 35916086
Alignment:
Q  210 atcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    ||||||||||||||||||||||||| |||||||| ||||| |||||| ||||||  || ||||||||||||||||    
T  35916160 atcgaatctgagatcttgaggaggaacacactcttaaatctcaagtcaataccaccagaccaacccaagtgggtt 35916086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 165 - 286
Target Start/End: Complemental strand, 19322887 - 19322766
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    ||||||||||||||||||||||  |||||||| |||||||||| |||| || | |||| ||||| ||||| ||||||| ||  ||||||  | ||||||     
T  19322887 ttttgaagaagttaaactaacctcctcaaattggcactagagagaatcaaaccagagaccttgaagaggagcacactcccaggtcccaaaccaataccac 19322788  T
Q  265 taggccaacccaagtgggttta 286  Q
    |||  |||||||||||||||||    
T  19322787 tagatcaacccaagtgggttta 19322766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 160 - 285
Target Start/End: Complemental strand, 37480199 - 37480074
Alignment:
Q  160 ttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctat 259  Q
    |||| ||||||||||| |||| || ||||| |||||| | ||  | || ||||||| |||||| ||||||||||| ||||||||||  ||||||| | ||    
T  37480199 tttttttttgaagaagctaaattagcccacccaaattgggaccggggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaat 37480100  T
Q  260 accaataggccaacccaagtgggttt 285  Q
    ||||  ||||||||||||||||||||    
T  37480099 accaccaggccaacccaagtgggttt 37480074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 165 - 284
Target Start/End: Complemental strand, 42922534 - 42922414
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatctt-gaggaggatcacactctcaaatcccaagtctatacca 263  Q
    |||| |||||| |||||||||||  ||||||| |||| ||||| ||||||| |||||| ||| |||||||| ||||||| ||  | ||||| | ||||||    
T  42922534 tttttaagaagctaaactaaccccatcaaattggcaccagagagaatcgaacctgagacctttgaggaggagcacactcccaggttccaagccaatacca 42922435  T
Q  264 ataggccaacccaagtgggtt 284  Q
     ||||||||||||||||||||    
T  42922434 ctaggccaacccaagtgggtt 42922414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 158 - 241
Target Start/End: Original strand, 2750576 - 2750659
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacact 241  Q
    |||||| ||||||||||| ||||||||||| |||||||| |||||||||| |||||||  ||||| |||||||| || ||||||    
T  2750576 tttttttttttgaagaagctaaactaaccccctcaaattggcactagagagaatcgaacatgagaccttgaggaagagcacact 2750659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 13803620 - 13803537
Alignment:
Q  159 tttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactc 242  Q
    ||||| |||| |||||| ||||||||||| |||||||| |||  ||||||||||||| |||||| ||||||||||| |||||||    
T  13803620 tttttttttttaagaaggtaaactaaccccctcaaattggcatcagagataatcgaacctgagaccttgaggaggagcacactc 13803537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 177 - 284
Target Start/End: Original strand, 40416359 - 40416466
Alignment:
Q  177 taaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaaccca 276  Q
    |||||||||||  ||||||| |||| ||||| ||||||| |||||| ||| ||||||| || |||| ||  | ||||||| |||||| ||||||||||||    
T  40416359 taaactaaccccttcaaattggcaccagagagaatcgaacctgagaccttaaggaggagcatactcccaggttccaagtcaataccactaggccaaccca 40416458  T
Q  277 agtgggtt 284  Q
    ||||||||    
T  40416459 agtgggtt 40416466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 158 - 284
Target Start/End: Complemental strand, 1435189 - 1435064
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||||| |||| || ||||| ||||||  ||| ||||| ||||||| |||||| ||||||||| | |||||||  |||||||||| |     
T  1435189 tttttttttttgaagaagctaaattagcccacccaaattgacaccagagagaatcgaa-ctgagaccttgaggagaagcacactcctaaatcccaagcca 1435091  T
Q  258 ataccaataggccaacccaagtgggtt 284  Q
     ||||| || |||||||||||||||||    
T  1435090 gtaccactatgccaacccaagtgggtt 1435064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 165 - 283
Target Start/End: Original strand, 16918535 - 16918653
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    ||||||||||| |||||||| |||  |||| | |||| ||||| |||| || || ||| ||||||||||| ||||||| || |||||||  | ||||||     
T  16918535 ttttgaagaagctaaactaaaccatccaaagtggcaccagagagaatccaacctaagaccttgaggaggagcacactcccagatcccaaaccaataccac 16918634  T
Q  265 taggccaacccaagtgggt 283  Q
    |||||||||||||||||||    
T  16918635 taggccaacccaagtgggt 16918653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 277
Target Start/End: Complemental strand, 9776428 - 9776313
Alignment:
Q  160 ttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctat 259  Q
    |||| ||| ||| |||||||| ||||||||  |||||||||  ||||||||||||| |||||||||||| || || |||| || ||||||||||||| ||    
T  9776428 ttttttttggaaaaagttaaattaacccacctaaattagcatcagagataatcgaacctgagatcttgaagatgagcaca-tc-caaatcccaagtcaat 9776331  T
Q  260 accaataggccaacccaa 277  Q
    |||| |||| ||||||||    
T  9776330 accactaggtcaacccaa 9776313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 285
Target Start/End: Original strand, 21195628 - 21195753
Alignment:
Q  160 ttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctat 259  Q
    |||| |||| |||||| |||| || ||||  ||||||  ||||||||  ||||||| |||||| ||||||||||| ||||||| ||| | ||||| ||||    
T  21195628 ttttttttttaagaagctaaattagcccatccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagttccaagcctat 21195727  T
Q  260 accaataggccaacccaagtgggttt 285  Q
    |||| |||| |||||||| |||||||    
T  21195728 accactagggcaacccaaatgggttt 21195753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 286
Target Start/End: Complemental strand, 42602673 - 42602552
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    ||||||||||| |||| || ||||| |||||| ||||  |||| |||| || || ||| |||||| |||| ||||||| ||  ||||||| | ||||||     
T  42602673 ttttgaagaagctaaattagcccacccaaattggcaccggagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaataccac 42602574  T
Q  265 taggccaacccaagtgggttta 286  Q
    ||||||||||||||||||||||    
T  42602573 taggccaacccaagtgggttta 42602552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 16381670 - 16381730
Alignment:
Q  224 cttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    |||||||||||  ||||||||| |||||||| |||||||| ||||||||||||||||||||    
T  16381670 cttgaggaggagaacactctcagatcccaagcctataccactaggccaacccaagtgggtt 16381730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 160 - 284
Target Start/End: Original strand, 42327347 - 42327471
Alignment:
Q  160 ttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctat 259  Q
    |||| |||| |||| | |||| || ||||| |||||| ||||   ||| ||||||| |||||| ||||||||||| ||||||| ||  ||||||| | ||    
T  42327347 ttttttttttaagatgctaaattagcccacccaaattggcaccgaagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaat 42327446  T
Q  260 accaataggccaacccaagtgggtt 284  Q
    |||| ||||||||||||||||||||    
T  42327447 accactaggccaacccaagtgggtt 42327471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 285
Target Start/End: Complemental strand, 3001465 - 3001378
Alignment:
Q  198 gcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggttt 285  Q
    |||| ||||||||||||| |||||||||  ||||||| |||||||  | ||| |||||| |||||| |||||||||||||||| ||||    
T  3001465 gcaccagagataatcgaacctgagatctcaaggaggagcacactcctagatctcaagtcaataccactaggccaacccaagtgagttt 3001378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 165 - 284
Target Start/End: Complemental strand, 11062478 - 11062360
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    ||||||||||| ||||||||| | ||||||||  ||| ||||| |||| || |||||| ||||||||| | ||||||| ||| | ||||| | ||| ||     
T  11062478 ttttgaagaagctaaactaactc-ctcaaattgacacaagagagaatcaaacctgagaccttgaggagaagcacactcccaagttccaagccaatatcac 11062380  T
Q  265 taggccaacccaagtgggtt 284  Q
    ||||||||||||||||||||    
T  11062379 taggccaacccaagtgggtt 11062360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 192 - 286
Target Start/End: Complemental strand, 1729908 - 1729814
Alignment:
Q  192 aaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggttta 286  Q
    ||||| |||| ||||| |||| ||||| ||| || |||||||| ||||||| ||| ||||||| | |||||| ||| ||||||||||||||||||    
T  1729908 aaattggcaccagagagaatcaaatctaagacctagaggaggagcacactcccaagtcccaagccaataccactagcccaacccaagtgggttta 1729814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 171 - 285
Target Start/End: Complemental strand, 45026856 - 45026742
Alignment:
Q  171 agaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggcc 270  Q
    ||||| ||||||||||| |||||||| |||| ||||| |||| ||  ||||| ||||||||||| |||||||  || | |||||||  ||| ||||| ||    
T  45026856 agaagctaaactaaccccctcaaattggcaccagagagaatcaaacatgagaccttgaggaggagcacactcctaagttccaagtcattactaatagacc 45026757  T
Q  271 aacccaagtgggttt 285  Q
    || ||||||||||||    
T  45026756 aaaccaagtgggttt 45026742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 286
Target Start/End: Complemental strand, 29503346 - 29503269
Alignment:
Q  209 aatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggttta 286  Q
    ||||||| |||||| ||||||||||| ||||||| ||  ||||||  | |||||| ||||||||||||||||||||||    
T  29503346 aatcgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaataccactaggccaacccaagtgggttta 29503269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 165 - 242
Target Start/End: Original strand, 30410506 - 30410583
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactc 242  Q
    ||||||||||| ||||||||||| |||||||| |||| ||||| |||||||  ||||  ||||||||||| |||||||    
T  30410506 ttttgaagaagctaaactaaccccctcaaattggcaccagagaaaatcgaacatgagtccttgaggaggagcacactc 30410583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 158 - 285
Target Start/End: Complemental strand, 11251213 - 11251086
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||| |||||||| || | |||  |||||  ||| ||||| |||| || |||||| ||||||||||| ||||||  ||| ||||||| |     
T  11251213 tttttttttttgaataagttaaattagcacacctaaattgacaccagagagaatcaaacctgagaccttgaggaggagcacacttccaagtcccaagcca 11251114  T
Q  258 ataccaataggccaacccaagtgggttt 285  Q
    |||||| || ||||||| ||||||||||    
T  11251113 ataccactaagccaacctaagtgggttt 11251086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 12497734 - 12497813
Alignment:
Q  160 ttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcaca 239  Q
    |||| |||| |||||| |||| ||| |||| |||| ||| |||||||| |||||||||||||| ||||||||||| ||||    
T  12497734 ttttttttttaagaagctaaattaatccacccaaaatagtactagagagaatcgaatctgagaccttgaggaggagcaca 12497813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 242
Target Start/End: Original strand, 41908595 - 41908672
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactc 242  Q
    ||||||||||| ||||||| ||||| |||||| ||||  | ||||||||||  ||||| ||||||||||| |||||||    
T  41908595 ttttgaagaagctaaactagcccacccaaattggcaccggggataatcgaacttgagaccttgaggaggagcacactc 41908672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 157 - 281
Target Start/End: Original strand, 33962733 - 33962857
Alignment:
Q  157 attttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtc 256  Q
    ||||||| |||| |||||| |||| ||  ||||  ||||| ||||||  || ||||||||| ||||||| |||||||| ||||||| ||  ||||||  |    
T  33962733 attttttttttttaagaagataaattagtccacctaaattggcactaaggagaatcgaatccgagatctcgaggaggagcacactcccagttcccaaacc 33962832  T
Q  257 tataccaataggccaacccaagtgg 281  Q
     ||| || |||||||||||||||||    
T  33962833 aatatcattaggccaacccaagtgg 33962857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 285
Target Start/End: Complemental strand, 39715067 - 39714991
Alignment:
Q  209 aatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggttt 285  Q
    ||||||| |||||| || |||||||| ||||||| ||  ||||||||| ||||||  | ||||||||||||||||||    
T  39715067 aatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccatgccaacccaagtgggttt 39714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 196
Target Start/End: Complemental strand, 2144572 - 2144533
Alignment:
Q  157 attttttattttgaagaagttaaactaacccactcaaatt 196  Q
    ||||||| |||||||||||||||| |||||||||||||||    
T  2144572 atttttttttttgaagaagttaaattaacccactcaaatt 2144533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 285
Target Start/End: Original strand, 11737995 - 11738121
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| |||| ||||| |||||||||||  || ||||| |  | ||||||||||||| |||| |  |||||||||| |||||||||| ||| | ||||     
T  11737995 ttttttttttttaagaaattaaactaaccttcttaaattgggtc-agagataatcgaacctgaaactttgaggaggaacacactctcagatctctagtca 11738093  T
Q  258 ataccaataggccaacccaagtgggttt 285  Q
    |||||| ||  ||||| |||||||||||    
T  11738094 ataccactaatccaactcaagtgggttt 11738121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 35203334 - 35203421
Alignment:
Q  159 tttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaa 246  Q
    ||||| ||||||||||| |||| ||||||||| |||||  ||| | |||||||||||  |||||  ||||||| || |||||||||||    
T  35203334 ttttttttttgaagaagctaaattaacccacttaaattgacaccaaagataatcgaacatgagactttgaggatgagcacactctcaa 35203421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 285
Target Start/End: Original strand, 29197396 - 29197453
Alignment:
Q  228 aggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggttt 285  Q
    ||||||| ||||||| ||| ||||||||| ||||||  | ||||||||||||||||||    
T  29197396 aggaggagcacactcccaagtcccaagtcaataccaccaagccaacccaagtgggttt 29197453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 9577963 - 9577879
Alignment:
Q  157 attttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacact 241  Q
    ||||||| |||| ||||||||||| || | |||  |||||| ||||||||  ||| ||| ||||||| |||||||||| ||||||    
T  9577963 atttttttttttaaagaagttaaattagcacacctaaattaacactagagggaattgaacctgagatattgaggaggagcacact 9577879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 8e-28; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 158 - 289
Target Start/End: Complemental strand, 4249303 - 4249172
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||||| ||||||||||| |||||||| |||| ||||| |||| || |||||| ||||||||||| |||||||  |||||||||| ||    
T  4249303 tttttttttttgaagaagctaaactaaccccctcaaattggcaccagagagaatcaaacctgagaccttgaggaggagcacactccaaaatcccaagcct 4249204  T
Q  258 ataccaataggccaacccaagtgggtttagac 289  Q
    |||||| |||||||| | ||||||||| ||||    
T  4249203 ataccactaggccaagcgaagtgggttgagac 4249172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 165 - 284
Target Start/End: Original strand, 37109308 - 37109427
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    ||||||||||  ||||||||||| |||||||| |||| ||||| ||||||| |||||| ||||||||||| ||||||| ||  ||||||| | ||||||     
T  37109308 ttttgaagaaactaaactaaccccctcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccac 37109407  T
Q  265 taggccaacccaagtgggtt 284  Q
    ||||||||||||||||||||    
T  37109408 taggccaacccaagtgggtt 37109427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 165 - 281
Target Start/End: Original strand, 7292755 - 7292871
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    ||||||||||| ||||||||||| |||||||| |||||||||| ||||||| ||||||  |||||||||| ||||||| ||  | ||||| | ||||||     
T  7292755 ttttgaagaagctaaactaaccccctcaaattggcactagagagaatcgaacctgagactttgaggaggagcacactcccaggttccaagccaataccac 7292854  T
Q  265 taggccaacccaagtgg 281  Q
    ||| |||||||||||||    
T  7292855 tagaccaacccaagtgg 7292871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 23378086 - 23377998
Alignment:
Q  154 aacattttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactc 242  Q
    |||||||||| ||||||||||| ||||||| ||| |||||||| |||||||||| ||||||| |||||| ||||||||||| |||||||    
T  23378086 aacatttttttttttgaagaagctaaactagccccctcaaattggcactagagagaatcgaacctgagaccttgaggaggagcacactc 23377998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 1730450 - 1730565
Alignment:
Q  169 gaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaatagg 268  Q
    ||||||| |||||||| || ||||||||||||| ||||| ||| ||||||||||  |||| ||||| ||||||||||  ||||||| | |||||| ||||    
T  1730450 gaagaagctaaactaatcccctcaaattagcaccagagagaatagaatctgagactttgaagaggagcacactctcaggtcccaagccaataccactagg 1730549  T
Q  269 ccaacccaagtgggtt 284  Q
     |||||||||||||||    
T  1730550 tcaacccaagtgggtt 1730565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 158 - 284
Target Start/End: Original strand, 8030154 - 8030280
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||||| |||| || ||||| ||||||  ||||||||  |||||||  ||||| ||||||||||| ||||||| ||| ||||||| ||    
T  8030154 tttttttttttgaagaagctaaattagcccacccaaattgacactagagggaatcgaacttgagaccttgaggaggagcacactcccaagtcccaagcct 8030253  T
Q  258 ataccaataggccaacccaagtgggtt 284  Q
    |||||| |||| ||| |||||||||||    
T  8030254 ataccactagggcaatccaagtgggtt 8030280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 203 - 284
Target Start/End: Complemental strand, 46545792 - 46545711
Alignment:
Q  203 agagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    ||||| |||||||||||||||||||||||||| ||||||||||  || |||| | |||||| ||||||||||||||||||||    
T  46545792 agagaaaatcgaatctgagatcttgaggaggagcacactctcaggtctcaagccaataccactaggccaacccaagtgggtt 46545711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 165 - 284
Target Start/End: Original strand, 31759615 - 31759734
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    ||||||||||| |||||||| ||  ||||||| | || ||| | |||||||||||||| ||||||||||| ||||||| ||| ||||||| | ||||||     
T  31759615 ttttgaagaagctaaactaatcccttcaaattggtaccagaaagaatcgaatctgagaccttgaggaggagcacactcccaagtcccaagccaataccac 31759714  T
Q  265 taggccaacccaagtgggtt 284  Q
    |||  |||||||||||||||    
T  31759715 tagatcaacccaagtgggtt 31759734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 165 - 284
Target Start/End: Complemental strand, 31826728 - 31826609
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    |||| |||||| |||| || ||||| ||||||  ||||| ||  |||||||  ||||| ||||||||||| ||||||| ||||||||||| ||||||||     
T  31826728 tttttaagaaggtaaattagcccacccaaattgacactaaagggaatcgaacttgagaccttgaggaggagcacactcgcaaatcccaagcctataccac 31826629  T
Q  265 taggccaacccaagtgggtt 284  Q
    |||| |||||||||||||||    
T  31826628 tagggcaacccaagtgggtt 31826609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 158 - 284
Target Start/End: Original strand, 37274409 - 37274536
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||||| |||| || |||||| |||||||||| ||||| ||||||| || ||| ||||||||||| ||||||| ||  ||||||| |     
T  37274409 tttttttttttgaagaagctaaattagcccacttaaattagcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggtcccaagcca 37274508  T
Q  258 a-taccaataggccaacccaagtgggtt 284  Q
    | ||| | ||||||||||||||||||||    
T  37274509 attacgactaggccaacccaagtgggtt 37274536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 158 - 269
Target Start/End: Complemental strand, 38869894 - 38869783
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| | ||||||||| ||||||||||| |||||||| |||| ||||  ||||||| |||||| ||||||||||| ||||||| || |||||||| |     
T  38869894 ttttttttgttgaagaagctaaactaaccccctcaaattggcaccagagggaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcca 38869795  T
Q  258 ataccaataggc 269  Q
    |||||| |||||    
T  38869794 ataccactaggc 38869783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 24991651 - 24991577
Alignment:
Q  160 ttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggagga 234  Q
    |||| ||||||||||||||||||||| | |||||||||| |||||||| ||||||| |||||| |||||||||||    
T  24991651 tttttttttgaagaagttaaactaactccctcaaattagtactagagaaaatcgaacctgagaccttgaggagga 24991577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 6666376 - 6666452
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggagga 234  Q
    |||||| ||||||||||| ||||||||||| |||||||  |||| ||||| ||||||| ||||||||||||||||||    
T  6666376 tttttttttttgaagaagctaaactaaccccctcaaatgggcaccagagagaatcgaacctgagatcttgaggagga 6666452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 234
Target Start/End: Complemental strand, 16581812 - 16581743
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggagga 234  Q
    ||||||||||| ||||||||||| |||||||| |||| ||||||||| ||| |||||| |||||||||||    
T  16581812 ttttgaagaagctaaactaaccctctcaaattggcaccagagataatagaacctgagaccttgaggagga 16581743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 286
Target Start/End: Original strand, 19680745 - 19680866
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    |||| |||||| ||||||||||  || ||||| |||| ||||| ||||||| || ||| |||||||| || ||||||| ||| |||||||   ||||||     
T  19680745 tttttaagaagctaaactaacctccttaaattggcaccagagagaatcgaacctaagaccttgaggaagagcacactcccaagtcccaagcgaataccac 19680844  T
Q  265 taggccaacccaagtgggttta 286  Q
    |||||||| |||||||||||||    
T  19680845 taggccaatccaagtgggttta 19680866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 15180866 - 15180790
Alignment:
Q  156 cattttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggag 232  Q
    |||||||| ||||||||||| ||||||||||| |||||||| |||| ||||| ||||||| || ||| |||||||||    
T  15180866 catttttttttttgaagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctaagaccttgaggag 15180790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 165 - 285
Target Start/End: Original strand, 51250479 - 51250599
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    |||| |||||| |||| || ||||| |||||| ||||  |||  |||||||  ||||||||||||| ||| ||||||| || |||||||| | ||||||     
T  51250479 tttttaagaagctaaattagcccacccaaattggcaccggagggaatcgaacttgagatcttgaggcggagcacactcccagatcccaagccaataccac 51250578  T
Q  265 taggccaacccaagtgggttt 285  Q
     ||||||||||||||||||||    
T  51250579 caggccaacccaagtgggttt 51250599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 165 - 284
Target Start/End: Complemental strand, 28635815 - 28635696
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    ||||||||||| |||| || ||||| |||||| |||| ||||| ||||||| || ||| ||  ||||||| ||||||| || ||||||||||  |||||     
T  28635815 ttttgaagaagctaaattagcccacccaaattggcaccagagagaatcgaacctaagacctccaggaggagcacactcccagatcccaagtcagtaccac 28635716  T
Q  265 taggccaacccaagtgggtt 284  Q
     ||| |||||||||||||||    
T  28635715 caggacaacccaagtgggtt 28635696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 285
Target Start/End: Original strand, 7949411 - 7949531
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    ||||||||||| |||| || |||||  |||||  ||| ||||| ||||||| |||||| ||||||||||| |||||||  |  ||||||| | |||||      
T  7949411 ttttgaagaagctaaattagcccacctaaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccgc 7949510  T
Q  265 taggccaacccaagtgggttt 285  Q
    ||||||| |||||||||||||    
T  7949511 taggccagcccaagtgggttt 7949531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 286
Target Start/End: Original strand, 18404833 - 18404961
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| |||| |||||| |||||||||||||| |||||  |||   ||||||||||| ||||||  |||| |||||  | | || |||||||||||||     
T  18404833 ttttttttttttaagaagctaaactaacccacttaaattgacaccttagataatcgaacctgagacattgatgaggagtatattcccaaatcccaagtca 18404932  T
Q  258 ataccaataggccaacccaagtgggttta 286  Q
    |||||| ||  ||||||||| ||||||||    
T  18404933 ataccactaaaccaacccaaatgggttta 18404961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 284
Target Start/End: Complemental strand, 45061057 - 45060978
Alignment:
Q  205 agataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    |||||||||||| |||||||||||  ||||  |||||  |||| |||||||| |||||| |||| |||||||||||||||    
T  45061057 agataatcgaatttgagatcttgaacaggagtacacttccaaaccccaagtcaataccactaggtcaacccaagtgggtt 45060978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 47044792 - 47044717
Alignment:
Q  209 aatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    ||||||| |||||| || |||||||| || ||||||| |||||||||| ||||||  ||||||| |||||||||||    
T  47044792 aatcgaacctgagacctcgaggaggagcaaactctcagatcccaagtcaataccaccaggccaatccaagtgggtt 47044717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 272
Target Start/End: Complemental strand, 7539715 - 7539602
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||||||||||||||||| ||||||||  ||  ||||| ||||||| |||||| |||||| |||| || |||| || |||| || ||     
T  7539715 tttttttttttgaagaagttaaactaaccc-ctcaaattgacagaagagagaatcgaacctgagaccttgagaaggagcatactcccagatccaaaatca 7539617  T
Q  258 ataccaataggccaa 272  Q
    |||||| ||| ||||    
T  7539616 ataccactagaccaa 7539602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 246
Target Start/End: Complemental strand, 21375889 - 21375815
Alignment:
Q  172 gaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaa 246  Q
    |||| |||| |||||||  ||||||  ||||||| | |||||||||||||| ||||||||||| |||||||||||    
T  21375889 gaagctaaattaacccatccaaattgacactagaaagaatcgaatctgagagcttgaggaggagcacactctcaa 21375815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 261
Target Start/End: Original strand, 42644893 - 42644963
Alignment:
Q  191 caaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctatac 261  Q
    |||||||||| | |||||||||||| ||||||  ||||||| || |||||||||| |||||||||| ||||    
T  42644893 caaattagcattggagataatcgaacctgagactttgaggaagaacacactctcagatcccaagtcaatac 42644963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 3743105 - 3743158
Alignment:
Q  203 agagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtc 256  Q
    ||||| |||||||||| ||||||||||||||| |||||||| | ||||||||||    
T  3743105 agagagaatcgaatctaagatcttgaggaggaacacactcttagatcccaagtc 3743158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 11592115 - 11592208
Alignment:
Q  170 aagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctatacca 263  Q
    ||||||||||| ||||| ||||||||| |  | ||||||||||||| || ||| || |||||||| ||||||||||  ||||||| | ||||||    
T  11592115 aagaagttaaattaaccaactcaaattggttccagagataatcgaacctaagacctggaggaggagcacactctcaggtcccaaggcaatacca 11592208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 158 - 263
Target Start/End: Original strand, 33632086 - 33632191
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| |||| |||||||||||||||||| ||||||||  ||| ||||| ||||||  ||| || ||||||||||| || |||| || || ||||| |     
T  33632086 ttttttttttttaagaagttaaactaaccccctcaaattgacaccagagagaatcgatcctgggaccttgaggaggagcatactcccatattccaagcca 33632185  T
Q  258 atacca 263  Q
    ||||||    
T  33632186 atacca 33632191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 286
Target Start/End: Complemental strand, 4923652 - 4923548
Alignment:
Q  182 taacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgg 281  Q
    |||||| |||||||| |||| ||||| ||| |||||||||| ||||| || || |||||| |||| | ||||  | ||| || ||||||||||||||| |    
T  4923652 taaccctctcaaattggcacaagagagaattgaatctgagaccttgacgatgagcacactttcaagttccaaaccaataacactaggccaacccaagtag 4923553  T
Q  282 gttta 286  Q
    |||||    
T  4923552 gttta 4923548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 241
Target Start/End: Original strand, 6894999 - 6895074
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacact 241  Q
    |||| ||||||||||||| ||| || ||||||  |||| |||| |||||||| ||||||||||||||||| ||||||    
T  6894999 tttttaagaagttaaacttacctac-caaattgacactggagaaaatcgaatttgagatcttgaggaggagcacact 6895074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 281
Target Start/End: Original strand, 33438435 - 33438551
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    |||||||||||  ||||||||||  |||||||  ||||||||||||| |||||||| || |||||||| | || |||  ||  | ||||| | ||||||     
T  33438435 ttttgaagaagggaaactaaccctttcaaattgacactagagataattgaatctgaaattttgaggagaaacatacttccaggttccaagccaataccac 33438534  T
Q  265 taggccaacccaagtgg 281  Q
    ||| |||||||||||||    
T  33438535 tagaccaacccaagtgg 33438551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 277
Target Start/End: Original strand, 49576851 - 49576963
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    |||||||||||||||  ||  |||| ||||||  || | |||| ||||||| |||||| ||||||||||| ||||||| ||| ||| ||| | ||||||     
T  49576851 ttttgaagaagttaagttagtccacccaaattgacattggagagaatcgaacctgagaccttgaggaggagcacactcccaagtccaaagccaataccac 49576950  T
Q  265 taggccaacccaa 277  Q
     ||||||||||||    
T  49576951 caggccaacccaa 49576963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 286
Target Start/End: Original strand, 52254354 - 52254482
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||||| ||||||| ||| |  | ||| ||||| |||| |||| || |||| | ||  ||||||| |||||||||| ||||||||||     
T  52254354 tttttttttttgaagaagctaaactagcccgcctacattggcactggagagaatctaacctgaaacctcaaggaggagcacactctcatatcccaagtca 52254453  T
Q  258 ataccaataggccaacccaagtgggttta 286  Q
    ||||||  || ||||| ||||||| ||||    
T  52254454 ataccatcagaccaactcaagtggattta 52254482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 273
Target Start/End: Original strand, 306304 - 306375
Alignment:
Q  202 tagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaac 273  Q
    |||||| ||||||||||||||  || | |||||||||||||||| ||||||| || |||||| ||| |||||    
T  306304 tagagaaaatcgaatctgagactttaaagaggatcacactctcagatcccaaatcaataccactagaccaac 306375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 284
Target Start/End: Original strand, 4483310 - 4483377
Alignment:
Q  217 ctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    |||||| |||||||||||||| |||||||  ||||||||| |||   | |||||||||||||||||||    
T  4483310 ctgagaccttgaggaggatcagactctcaggtcccaagtcaatattgacaggccaacccaagtgggtt 4483377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 284
Target Start/End: Complemental strand, 8714798 - 8714680
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    |||||||||||||||||||   |||  ||||| |||||  ||| |||| ||||||| | ||||||||||| ||| |||||| |||||||  | ||||||     
T  8714798 ttttgaagaagttaaactagttcacctaaattggcactgaagagaatcaaatctgaaaccttgaggaggaacacgctctcagatcccaaaccaataccac 8714699  T
Q  265 taggccaacccaagtgggtt 284  Q
    ||||  ||||||||||||||    
T  8714698 tagg-taacccaagtgggtt 8714680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 234
Target Start/End: Complemental strand, 12448832 - 12448758
Alignment:
Q  159 tttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggagga 234  Q
    ||||| ||||||||||| |||| || | |||| ||||| |||||| ||| ||||||| ||||||||||||||||||    
T  12448832 ttttttttttgaagaagctaaattagctcact-aaattggcactaaagagaatcgaacctgagatcttgaggagga 12448758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 19238578 - 19238653
Alignment:
Q  209 aatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    ||||||| | |||| || |||||||| ||||||| ||| ||||||| | ||||||  |||||||||||||||||||    
T  19238578 aatcgaacccgagacctcgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaagtgggtt 19238653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 286
Target Start/End: Original strand, 21660135 - 21660222
Alignment:
Q  199 cactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggttta 286  Q
    |||||||||||||||||  ||||| || ||||| || ||||||| || ||| |||||| ||||||  || ||||||||||| ||||||    
T  21660135 cactagagataatcgaacttgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagaccaacccaagttggttta 21660222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 286
Target Start/End: Original strand, 21668899 - 21668986
Alignment:
Q  199 cactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggttta 286  Q
    |||||||||||||||||  ||||| || ||||| || ||||||| || ||| |||||| ||||||  || ||||||||||| ||||||    
T  21668899 cactagagataatcgaacttgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagaccaacccaagttggttta 21668986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 26499065 - 26499026
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaatta 197  Q
    |||||| |||| ||||||||||||||||||||||||||||    
T  26499065 ttttttttttttaagaagttaaactaacccactcaaatta 26499026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 286
Target Start/End: Original strand, 2184989 - 2185111
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    |||| |||||| ||||||||||| |||||||| |||   |||| ||||||| ||||||  ||||| |||| ||||||| ||  | ||||| |  |||||     
T  2184989 tttttaagaagctaaactaaccccctcaaattggcatcggagagaatcgaacctgagactttgagaaggagcacactcccaggttccaagccattaccac 2185088  T
Q  265 taggccaaccc-aagtgggttta 286  Q
    ||||||||||| |||||||||||    
T  2185089 taggccaacccgaagtgggttta 2185111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 9693450 - 9693524
Alignment:
Q  160 ttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggagga 234  Q
    |||| ||||||||||| |||| || ||||| ||||||  ||||||||  ||||||| |||||| |||||||||||    
T  9693450 tttttttttgaagaaggtaaattagcccacccaaattgacactagagggaatcgaacctgagaccttgaggagga 9693524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 192 - 286
Target Start/End: Complemental strand, 11418311 - 11418218
Alignment:
Q  192 aaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggttta 286  Q
    |||||||||| |||||||||||||  || || ||||||  ||| ||||||  ||||||||||||| ||| || ||| |||||||||||| |||||    
T  11418311 aaattagcac-agagataatcgaacatgggaccttgagtcggagcacacttccaaatcccaagtcaatatcactagaccaacccaagtgagttta 11418218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 20771037 - 20770955
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacac 240  Q
    |||||| |||| ||||||||||| |||||| |||||||| ||||  |||| |||||||  ||||| |||||| |||| |||||    
T  20771037 ttttttttttttaagaagttaaattaaccccctcaaattggcacctgagagaatcgaacttgagaccttgagaaggaacacac 20770955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 284
Target Start/End: Original strand, 9936980 - 9937037
Alignment:
Q  227 gaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    |||||||| ||||||| ||| || |||||| |||||| ||||||||||||||| ||||    
T  9936980 gaggaggagcacactcccaagtctcaagtcgataccactaggccaacccaagtaggtt 9937037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 285
Target Start/End: Original strand, 27965538 - 27965587
Alignment:
Q  236 cacactctcaaatcccaagtctataccaataggccaacccaagtgggttt 285  Q
    ||||||| || |||||||| | |||||| |||||||||||||||||||||    
T  27965538 cacactcccagatcccaagccaataccactaggccaacccaagtgggttt 27965587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 242
Target Start/End: Original strand, 30938176 - 30938253
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactc 242  Q
    ||||||||||| |||||||||||||  ||||| ||| | | || ||||||| |||||| || |||||||| |||||||    
T  30938176 ttttgaagaagctaaactaacccacctaaattggcattggggagaatcgaacctgagacctcgaggaggagcacactc 30938253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 263
Target Start/End: Original strand, 48480776 - 48480881
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| |||| |||||| |||||||| || ||||||||  ||  | ||| |||  ||||||||| |||||||||||  ||||||  | |||||||||||    
T  48480776 ttttttttttttaagaagctaaactaagcccctcaaattgacatcacagagaattaaatctgagaccttgaggaggaggacactccaagatcccaagtct 48480875  T
Q  258 atacca 263  Q
    ||||||    
T  48480876 atacca 48480881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 286
Target Start/End: Original strand, 20281194 - 20281270
Alignment:
Q  210 atcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggttta 286  Q
    |||||| ||| || ||||||||||| ||| ||||||| ||||||||| ||||||   | ||||||||||||| ||||    
T  20281194 atcgaacctgggaccttgaggaggagcacgctctcaattcccaagtcaataccaccggaccaacccaagtggattta 20281270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 46295211 - 46295139
Alignment:
Q  170 aagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactc 242  Q
    |||||| ||||||| ||||| |||||| ||||  | || ||||||| |||||| ||||||||||| |||||||    
T  46295211 aagaagctaaactagcccacccaaattggcaccggggagaatcgaacctgagaccttgaggaggagcacactc 46295139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 3e-27; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 159 - 289
Target Start/End: Complemental strand, 2799987 - 2799857
Alignment:
Q  159 tttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtcta 258  Q
    ||||| ||||||||||| ||||||||||| |||||||| |||| ||||| ||||||| |||||| ||||||||||| ||||||| || ||| |||| |||    
T  2799987 ttttttttttgaagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagccta 2799888  T
Q  259 taccaataggccaacccaagtgggtttagac 289  Q
    ||||| |||||||| | ||||||||| ||||    
T  2799887 taccactaggccaagcgaagtgggttgagac 2799857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 172 - 286
Target Start/End: Complemental strand, 8904526 - 8904412
Alignment:
Q  172 gaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggcca 271  Q
    |||||||||||||||| |||||||| |||| ||||| |||||||  ||||| ||||||||||| ||||||| || |||||||||| |||| | |||||||    
T  8904526 gaagttaaactaaccccctcaaattggcaccagagagaatcgaacttgagaccttgaggaggagcacactcacatatcccaagtcaatactactaggcca 8904427  T
Q  272 acccaagtgggttta 286  Q
    |||||||||||||||    
T  8904426 acccaagtgggttta 8904412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 159 - 285
Target Start/End: Original strand, 8177133 - 8177259
Alignment:
Q  159 tttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtcta 258  Q
    ||||| ||||||||||| ||||||||||| |||||||| |||| ||||| ||||||| |||| | ||||||||||| ||||||| || |||||||| | |    
T  8177133 ttttttttttgaagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctgaaaccttgaggaggagcacactcccagatcccaagccaa 8177232  T
Q  259 taccaataggccaacccaagtgggttt 285  Q
    ||||| ||||||||| ||| |||||||    
T  8177233 taccactaggccaactcaaatgggttt 8177259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 157 - 285
Target Start/End: Complemental strand, 6122921 - 6122793
Alignment:
Q  157 attttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtc 256  Q
    ||||||| ||||||||||| |||| || ||||| ||||||  ||||||||  ||||||| |||||| ||||||||||| ||||||| ||| ||||||| |    
T  6122921 atttttttttttgaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcc 6122822  T
Q  257 tataccaataggccaacccaagtgggttt 285  Q
    ||||||| |||| |||||||| |||||||    
T  6122821 tataccactagggcaacccaaatgggttt 6122793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 33700735 - 33700847
Alignment:
Q  170 aagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggc 269  Q
    |||||||||||||||||| || ||||| |||| ||||| ||||||| |||||| ||||||||||| ||||||| || || ||||| | |||||| |||||    
T  33700735 aagaagttaaactaacccccttaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagattccaagccaataccactaggc 33700834  T
Q  270 caacccaagtggg 282  Q
    |||||||||||||    
T  33700835 caacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 284
Target Start/End: Original strand, 9165146 - 9165271
Alignment:
Q  159 tttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtcta 258  Q
    ||||| ||||||||||  |||| |||||| |||||||| |||| ||||| ||| ||| ||||||  |||||||||| ||||||| ||  ||||||| | |    
T  9165146 ttttttttttgaagaaactaaagtaaccccctcaaattggcaccagagagaattgaacctgagactttgaggaggagcacactcccaggtcccaagccaa 9165245  T
Q  259 taccaataggccaacccaagtgggtt 284  Q
    ||||| ||||||||||||||||||||    
T  9165246 taccactaggccaacccaagtgggtt 9165271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 165 - 285
Target Start/End: Complemental strand, 11063675 - 11063555
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    ||||||||||| |||||||||||  ||||||| |||||||||| ||||||| || ||| ||||||||||| |||||| |||  ||||||| | ||||||     
T  11063675 ttttgaagaagctaaactaaccccttcaaattggcactagagagaatcgaacctaagaccttgaggaggaacacactttcaggtcccaagccaataccac 11063576  T
Q  265 taggccaacccaagtgggttt 285  Q
    |||  |||||||| |||||||    
T  11063575 tagatcaacccaaatgggttt 11063555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 165 - 285
Target Start/End: Complemental strand, 36371589 - 36371469
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    |||| |||||| ||||||||||| |||||||| |||  ||||| ||||||| || ||| ||||||||||| ||||||| ||  | ||||| | ||||||     
T  36371589 tttttaagaagctaaactaaccccctcaaattggcatcagagagaatcgaacctcagaccttgaggaggagcacactcccaggttccaagccaataccac 36371490  T
Q  265 taggccaacccaagtgggttt 285  Q
    |||||||||||||||||||||    
T  36371489 taggccaacccaagtgggttt 36371469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 51814593 - 51814493
Alignment:
Q  185 cccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    ||||| |||||| ||||  |||| ||||||| |||||| ||||||||||| |||||||||| ||| |||||| ||||||  |||||||||||||||||||    
T  51814593 cccacccaaattggcaccggagagaatcgaacctgagaccttgaggaggagcacactctcagatctcaagtcaataccatcaggccaacccaagtgggtt 51814494  T
Q  285 t 285  Q
    |    
T  51814493 t 51814493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 158 - 253
Target Start/End: Complemental strand, 40810593 - 40810498
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaa 253  Q
    |||||| ||||||||||| ||||||||||| |||||||| |||| ||||| ||||||| |||||| ||||| ||||| ||||||| || |||||||    
T  40810593 tttttttttttgaagaagctaaactaaccctctcaaattggcaccagagagaatcgaacctgagaccttgaagaggaacacactcccagatcccaa 40810498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 158 - 284
Target Start/End: Complemental strand, 16893520 - 16893394
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||||| |||| || ||||||||||||  |||  |||| ||||||| |||||| || ||||||||  |||||| |||||| |||| |     
T  16893520 tttttttttttgaagaagctaaattagcccactcaaattgacaccggagaaaatcgaacctgagacctcgaggaggagtacactcccaaatctcaagcca 16893421  T
Q  258 ataccaataggccaacccaagtgggtt 284  Q
    ||||||| ||| |||||||||||||||    
T  16893420 ataccaacaggtcaacccaagtgggtt 16893394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 52336725 - 52336839
Alignment:
Q  159 tttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtcta 258  Q
    ||||| |||||||||| ||||| || ||||  ||||||  ||| ||||||||||||| |||||||||| ||||||| ||||||| || |||||||| | |    
T  52336725 ttttttttttgaagaaattaaattagcccatccaaattgacaccagagataatcgaacctgagatcttaaggaggagcacactcccagatcccaagccaa 52336824  T
Q  259 taccaataggccaac 273  Q
    ||||| |||||||||    
T  52336825 taccactaggccaac 52336839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 286
Target Start/End: Original strand, 21547429 - 21547558
Alignment:
Q  157 attttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtc 256  Q
    ||||||| ||||||||||||||||||| |||||  ||||| |||  ||||| ||||||| |||| | || |||||||| ||| ||| ||  ||||||| |    
T  21547429 atttttttttttgaagaagttaaactagcccacctaaattggcatcagagagaatcgaacctgaaacctcgaggaggagcaccctcccatgtcccaagcc 21547528  T
Q  257 tataccaataggccaacccaagtgggttta 286  Q
     |||||| ||||||||||||||| ||||||    
T  21547529 aataccactaggccaacccaagtcggttta 21547558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 165 - 281
Target Start/End: Original strand, 15786278 - 15786393
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    ||||||| ||||||||||||||| ||||||||  ||| | ||| ||||||| |||||| ||||||||||| ||||||| || |||||||| | |||| |     
T  15786278 ttttgaaaaagttaaactaaccc-ctcaaattgacaccaaagagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatactac 15786376  T
Q  265 taggccaacccaagtgg 281  Q
    ||| |||||||||||||    
T  15786377 tagaccaacccaagtgg 15786393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 177 - 284
Target Start/End: Complemental strand, 42787315 - 42787208
Alignment:
Q  177 taaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaaccca 276  Q
    |||| |||| || |||||||  ||||||||| | ||||||||||||  |||||||||| | ||||||||| ||||||||| |||||| |||||||||| |    
T  42787315 taaattaactcattcaaattgacactagagagactcgaatctgagactttgaggaggaacgcactctcaagtcccaagtcaataccactaggccaaccta 42787216  T
Q  277 agtgggtt 284  Q
    | ||||||    
T  42787215 actgggtt 42787208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 158 - 280
Target Start/End: Original strand, 14787286 - 14787408
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||||| |||||||||||||| |||||   | |||||| ||||||| |||| | ||||||||| | ||||||||||  || ||||||     
T  14787286 tttttttttttgaagaagctaaactaacccacttaaattgatattagagagaatcgaacctgacaccttgaggagaaacacactctcaggtctcaagtca 14787385  T
Q  258 ataccaataggccaacccaagtg 280  Q
    |||||| |||| |||| ||||||    
T  14787386 ataccactaggtcaactcaagtg 14787408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 159 - 284
Target Start/End: Original strand, 31794215 - 31794340
Alignment:
Q  159 tttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaa-tctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    ||||| ||||||||||| |||| || ||||| ||||||  ||| ||||  ||||||| ||| ||| ||||||||||| ||||||| ||| ||||||| |     
T  31794215 tttttgttttgaagaagctaaattagcccacccaaattgacaccagagggaatcgaactct-agaccttgaggaggagcacactcccaagtcccaagcca 31794313  T
Q  258 ataccaataggccaacccaagtgggtt 284  Q
    |||||| ||||||||||||||||||||    
T  31794314 ataccactaggccaacccaagtgggtt 31794340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 286
Target Start/End: Complemental strand, 4566672 - 4566546
Alignment:
Q  159 tttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtcta 258  Q
    ||||| ||||||||||| ||||||||||| || |||||  ||  ||||| ||||||| |||||| | ||||||||| ||||||| ||  | ||||| | |    
T  4566672 ttttttttttgaagaagctaaactaaccc-cttaaattgacatcagagagaatcgaacctgagaccctgaggaggagcacactcccaggttccaagccaa 4566574  T
Q  259 taccaataggccaacccaagtgggttta 286  Q
    || || ||||||||||||||||||||||    
T  4566573 tatcactaggccaacccaagtgggttta 4566546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 285
Target Start/End: Complemental strand, 6650721 - 6650594
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||||| |||||||| ||||  |||||  ||| ||||| ||||||| ||||||  |||||||||| || |||| |  |||||||| |     
T  6650721 tttttttttttgaagaagctaaactaatccacctaaattgacaccagagagaatcgaacctgagacattgaggaggagcatactccccgatcccaagcca 6650622  T
Q  258 ataccaataggccaacccaagtgggttt 285  Q
    |||||| |||||||||| || |||||||    
T  6650621 ataccactaggccaacctaattgggttt 6650594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 29753775 - 29753700
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggagg 233  Q
    |||||| ||||||||||| ||||||||||| || ||||| |||| ||||| ||||||| |||||| ||||||||||    
T  29753775 tttttttttttgaagaagctaaactaaccctcttaaattggcaccagagagaatcgaacctgagaccttgaggagg 29753700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 166 - 284
Target Start/End: Complemental strand, 10526941 - 10526823
Alignment:
Q  166 tttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaat 265  Q
    |||||||||| |||| |||||||| ||||||  | | ||||| |||||||||||||| ||||||||||| || |||| ||  ||||||| | |||||| |    
T  10526941 tttgaagaagctaaattaacccacccaaattgactccagagagaatcgaatctgagaccttgaggaggagcaaactcccaggtcccaagccaataccact 10526842  T
Q  266 aggccaacccaagtgggtt 284  Q
     | ||||||||| ||||||    
T  10526841 ggaccaacccaaatgggtt 10526823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 157 - 242
Target Start/End: Complemental strand, 39979211 - 39979126
Alignment:
Q  157 attttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactc 242  Q
    ||||||||||||||||||| |||| |||| ||| |||||| ||||  ||||||||||||| ||| | || |||||||| |||||||    
T  39979211 attttttattttgaagaagctaaattaacacacccaaattggcacatgagataatcgaatatgatacctcgaggaggagcacactc 39979126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 284
Target Start/End: Complemental strand, 44961890 - 44961765
Alignment:
Q  159 tttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtcta 258  Q
    ||||| |||| |||||| |||| || ||||| ||||||  ||||||||| ||||||| |||||| | ||||||||| |||||||| ||||| ||||   |    
T  44961890 tttttttttttaagaagctaaattagcccacccaaattgacactagagagaatcgaacctgagaccctgaggaggagcacactcttaaatctcaagctaa 44961791  T
Q  259 taccaataggccaacccaagtgggtt 284  Q
    |||||   | ||||||||||||||||    
T  44961790 taccacctgaccaacccaagtgggtt 44961765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 284
Target Start/End: Original strand, 27567106 - 27567198
Alignment:
Q  192 aaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    ||||||||| |||||| |||||||||||||| ||||| ||||| ||||||||||  | ||||||| ||| ||   | ||||||||||||||||    
T  27567106 aaattagcattagagaaaatcgaatctgagaccttgaagaggagcacactctcaggttccaagtcaatatcatccgaccaacccaagtgggtt 27567198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 165 - 284
Target Start/End: Complemental strand, 1094644 - 1094525
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    |||||||||||||||| || |||||  ||||| ||||  |||| |||||||| ||||| || | |||||| ||||||| ||  | ||||||| |||||||    
T  1094644 ttttgaagaagttaaattagcccacctaaattggcaccggagagaatcgaatttgagacctcgtggaggagcacactcacaggttccaagtcaataccaa 1094545  T
Q  265 taggccaacccaagtgggtt 284  Q
     |  ||||||||||||||||    
T  1094544 caaaccaacccaagtgggtt 1094525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 284
Target Start/End: Original strand, 7743322 - 7743401
Alignment:
Q  205 agataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    |||||||||||  ||||| || |||||||| ||||||| ||||| || |||  |||||| ||||||||||||||||||||    
T  7743322 agataatcgaacttgagacctagaggaggaccacactcccaaattcctagttaataccactaggccaacccaagtgggtt 7743401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 283
Target Start/End: Original strand, 18459192 - 18459307
Alignment:
Q  169 gaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtcta-taccaatag 267  Q
    |||||||||||  || |||||||||||||||||  |||| |||| ||||| ||| ||  ||||||| ||||||| ||| ||||||| | | ||||| |||    
T  18459192 gaagaagttaatttatcccactcaaattagcacatgagagaatcaaatctaagacctcaaggaggagcacactcccaagtcccaagccaattaccactag 18459291  T
Q  268 gccaacccaagtgggt 283  Q
     |||||||||||||||    
T  18459292 accaacccaagtgggt 18459307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 19528328 - 19528403
Alignment:
Q  209 aatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    ||||||| |||||| ||||||||||| |||||||  | |||||||| | ||||||  |||||||||||||||||||    
T  19528328 aatcgaacctgagaccttgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaagtgggtt 19528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 283
Target Start/End: Complemental strand, 44126487 - 44126396
Alignment:
Q  192 aaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggt 283  Q
    ||||| |||||||||| |||| ||||||||| || | |||||| ||||||| ||  ||||| ||| ||||||  ||||||||||||||||||    
T  44126487 aaattggcactagagagaatcaaatctgagacctcgtggaggagcacactcccaggtcccaggtcaataccaccaggccaacccaagtgggt 44126396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 284
Target Start/End: Complemental strand, 9117245 - 9117119
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| |||||||||||||||| || | | | |||||||| ||| || | ||||||| |||||| ||  ||||||| ||||||  || |||||||| |     
T  9117245 tttttttttttgaagaagttaaattagcacgcccaaattagtactggaaagaatcgaacctgagacctcaaggaggagcacacttccagatcccaagccc 9117146  T
Q  258 ataccaataggccaacccaagtgggtt 284  Q
    |||||||  ||||||||||| ||||||    
T  9117145 ataccaaccggccaacccaaatgggtt 9117119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 263
Target Start/End: Original strand, 9643766 - 9643864
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctatacca 263  Q
    |||||||||||||||| ||||| ||  |||||  |||  |||||||| |||||||||| |||||||| || ||||||| || |||||||| | ||||||    
T  9643766 ttttgaagaagttaaattaacctacaaaaattgacaccggagataattgaatctgagaccttgaggatgaacacactcccagatcccaagccaatacca 9643864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 285
Target Start/End: Complemental strand, 25297829 - 25297771
Alignment:
Q  227 gaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggttt 285  Q
    |||||||| |||||||||| |||| ||||| |||||| ||| |||||||||||||||||    
T  25297829 gaggaggagcacactctcagatcctaagtcaataccactagaccaacccaagtgggttt 25297771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 263
Target Start/End: Original strand, 48619166 - 48619264
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctatacca 263  Q
    |||||||||||||||| ||  |||||||||||  |||  |||||||| ||| |||||||||||||||  | ||||||| ||| || |||||| ||||||    
T  48619166 ttttgaagaagttaaattagtccactcaaattgacaccggagataatagaacctgagatcttgaggaaaaacacactcccaagtctcaagtcaatacca 48619264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 281
Target Start/End: Complemental strand, 9964530 - 9964441
Alignment:
Q  192 aaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgg 281  Q
    ||||||||||| ||||||||| || ||||||  ||||||| || ||||||| || |||||||||| ||| ||  |||| |||||||||||    
T  9964530 aaattagcactggagataatcaaacctgagacattgaggaagagcacactcccagatcccaagtcaataacatcaggctaacccaagtgg 9964441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 286
Target Start/End: Complemental strand, 40257526 - 40257397
Alignment:
Q  157 attttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtc 256  Q
    ||||||| ||||||||||| ||||||| ||||| ||||||  |||  || | ||| |||  ||||| || |||||||| ||||||| ||  || |||| |    
T  40257526 atttttttttttgaagaagctaaactagcccacccaaattgacaccggatagaattgaacttgagacctcgaggaggagcacactcccaggtctcaagcc 40257427  T
Q  257 tataccaataggccaacccaagtgggttta 286  Q
     ||||||  |||||||||||||||||||||    
T  40257426 aataccaccaggccaacccaagtgggttta 40257397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 280
Target Start/End: Complemental strand, 19088317 - 19088213
Alignment:
Q  176 ttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaaccc 275  Q
    ||||| || ||||||||||||| ||| ||||  ||||||| || | | |||||||||||  ||| ||||||||| || | | |||||| |||||||||||    
T  19088317 ttaaattagcccactcaaattaacaccagagtgaatcgaacctaaaaccttgaggaggagtacaatctcaaatctcaggccaataccactaggccaaccc 19088218  T
Q  276 aagtg 280  Q
    |||||    
T  19088217 aagtg 19088213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 284
Target Start/End: Original strand, 52116733 - 52116857
Alignment:
Q  160 ttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctat 259  Q
    |||| |||| |||||| |||| || |||||   |||| ||||||| || ||| ||| ||||||  |||||||||| ||||||| ||| ||||||| | ||    
T  52116733 ttttttttttaagaagctaaattagcccaccttaattggcactagggagaattgaacctgagacattgaggaggagcacactcccaagtcccaagccaat 52116832  T
Q  260 accaataggccaacccaagtgggtt 284  Q
    ||||  |||||||||||| ||||||    
T  52116833 accaccaggccaacccaactgggtt 52116857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 254
Target Start/End: Complemental strand, 9879555 - 9879468
Alignment:
Q  167 ttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaag 254  Q
    |||||||||||||| || ||||| ||||||  ||  |||||||||||||||||||| ||  |||| ||  ||||||||| ||||||||    
T  9879555 ttgaagaagttaaattagcccacccaaattgacataagagataatcgaatctgagacctcaaggaagagtacactctcagatcccaag 9879468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 11438501 - 11438560
Alignment:
Q  225 ttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    ||||||||||||||||||| ||||| |||||| ||||||  || ||||| ||||||||||    
T  11438501 ttgaggaggatcacactcttaaatcgcaagtcaataccatcagaccaactcaagtgggtt 11438560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 16169979 - 16170054
Alignment:
Q  209 aatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    ||||||| |||| | ||||||||||| ||||||| ||  ||||||||| ||||||  |||| ||||||||||||||    
T  16169979 aatcgaacctgaaaccttgaggaggaacacactcccaggtcccaagtcaataccaccaggctaacccaagtgggtt 16170054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 286
Target Start/End: Original strand, 34460904 - 34460987
Alignment:
Q  203 agagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggttta 286  Q
    ||||||||| |||||||||| ||| ||||||| |||||| | |  || |||||| |||||| || |||||| ||||||||||||    
T  34460904 agagataattgaatctgagaccttcaggaggaacacacttttaggtctcaagtcaataccactaagccaactcaagtgggttta 34460987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 41508901 - 41508830
Alignment:
Q  214 aatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggttt 285  Q
    ||||||||| ||||||||||| ||||||| || |||||||  |  |||||  ||||||||||||||||||||    
T  41508901 aatctgagaccttgaggaggagcacactcccagatcccaaaccagtaccaccaggccaacccaagtgggttt 41508830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 256
Target Start/End: Complemental strand, 3266049 - 3265952
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtc 256  Q
    |||||| ||||||||||  |||||||||   |||||||| | || ||||| ||||||| |||||| ||||||||||| ||||||| ||| | |||||||    
T  3266049 tttttttttttgaagaaactaaactaacat-ctcaaattggaaccagagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagtc 3265952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 284
Target Start/End: Complemental strand, 45266960 - 45266834
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||| ||| ||||||| ||||  |||||| ||||  | || ||||||| |||||| ||||||||||| || ||||  ||  ||||||||     
T  45266960 tttttttttttgaataagctaaactagcccatccaaattggcaccggggagaatcgaacctgagaccttgaggaggagcaaactccaaagccccaagtca 45266861  T
Q  258 ataccaataggccaacccaagtgggtt 284  Q
    | ||| | |||||||| ||||||||||    
T  45266860 acaccgacaggccaactcaagtgggtt 45266834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 3679264 - 3679321
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaa 215  Q
    |||||| |||| |||||| ||||||||||| |||||||| |||| ||||| |||||||    
T  3679264 ttttttttttttaagaagctaaactaaccccctcaaattggcaccagagagaatcgaa 3679321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 4280410 - 4280499
Alignment:
Q  167 ttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtc 256  Q
    |||||||||||||| || | ||| |||||||||||   ||| |||| || |||||| ||| ||||| | ||||||||||| |||||||||    
T  4280410 ttgaagaagttaaattagctcacccaaattagcaccgaagagaatcaaacctgagaccttcaggagaagcacactctcaagtcccaagtc 4280499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 284
Target Start/End: Complemental strand, 12259317 - 12259260
Alignment:
Q  227 gaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    |||||||| ||||||| ||||||||||||  ||| || || |||||||||||||||||    
T  12259317 gaggaggagcacactcccaaatcccaagttaatatcactatgccaacccaagtgggtt 12259260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 280
Target Start/End: Original strand, 17745251 - 17745328
Alignment:
Q  203 agagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtg 280  Q
    ||||| |||||||  ||||| || |||||||| ||||| ||||  ||||||| | |||||| ||||||||||||||||    
T  17745251 agagagaatcgaacatgagacctcgaggaggagcacacgctcaggtcccaagccaataccactaggccaacccaagtg 17745328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 248
Target Start/End: Original strand, 27127348 - 27127393
Alignment:
Q  203 agagataatcgaatctgagatcttgaggaggatcacactctcaaat 248  Q
    ||||| |||||||||||||| ||| ||||||| |||||||||||||    
T  27127348 agagaaaatcgaatctgagagcttaaggaggaacacactctcaaat 27127393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 32524438 - 32524381
Alignment:
Q  177 taaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggagga 234  Q
    ||||||||||| |||||||| |||| ||||| |||||||  ||||||||||| |||||    
T  32524438 taaactaaccccctcaaattggcaccagagagaatcgaacttgagatcttgaagagga 32524381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 234
Target Start/End: Original strand, 33981120 - 33981189
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggagga 234  Q
    |||| |||||| ||||||||||| ||||||| ||||  ||||| ||||||| ||||  ||||||||||||    
T  33981120 tttttaagaagctaaactaaccccctcaaatgagcatcagagagaatcgaacctgaattcttgaggagga 33981189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 277
Target Start/End: Complemental strand, 17410306 - 17410238
Alignment:
Q  209 aatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaa 277  Q
    |||||||  |||||||| |||||||| ||||||| || |||||||  | |||||| |||||||||||||    
T  17410306 aatcgaacttgagatctcgaggaggaccacactcccagatcccaaaccaataccactaggccaacccaa 17410238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 23745247 - 23745191
Alignment:
Q  159 tttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaa 215  Q
    ||||| |||||||||||  |||||| |||||| ||||| |||||||||| |||||||    
T  23745247 ttttttttttgaagaagccaaactagcccactgaaattggcactagagagaatcgaa 23745191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 284
Target Start/End: Complemental strand, 50901700 - 50901581
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctat-acca 263  Q
    |||| |||||| |||| || |||||  ||||| ||||| |||| |||||||| ||||| || |||||||| ||||||  ||  ||||||| | || ||||    
T  50901700 tttttaagaagctaaattagcccacctaaattggcact-gagagaatcgaatttgagacctcgaggaggagcacactaccaggtcccaagccaattacca 50901602  T
Q  264 ataggccaacccaagtgggtt 284  Q
     ||||||||||||||||||||    
T  50901601 ctaggccaacccaagtgggtt 50901581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 8e-25; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 167 - 285
Target Start/End: Original strand, 12188262 - 12188380
Alignment:
Q  167 ttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaata 266  Q
    ||||||||| ||||||||||| |||||||| |||||||||| |||||||  ||| | ||||||||||| ||||||| ||  ||||||| | |||||| ||    
T  12188262 ttgaagaagctaaactaaccccctcaaattggcactagagagaatcgaacttgaaaccttgaggaggagcacactcccaggtcccaagccaataccacta 12188361  T
Q  267 ggccaacccaagtgggttt 285  Q
    |||||||||||||||||||    
T  12188362 ggccaacccaagtgggttt 12188380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 160 - 286
Target Start/End: Complemental strand, 13330211 - 13330085
Alignment:
Q  160 ttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctat 259  Q
    |||| |||| |||||| ||||||||||| |||||||| |||| ||||| |||||||||||||| ||||||||||| |  |||| ||| | | ||||| ||    
T  13330211 ttttttttttaagaagctaaactaaccctctcaaattggcacaagagagaatcgaatctgagaccttgaggaggagcttactcccaagttcaaagtcaat 13330112  T
Q  260 accaataggccaacccaagtgggttta 286  Q
    |||| |||| |||||||||||||||||    
T  13330111 accactaggtcaacccaagtgggttta 13330085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 159 - 253
Target Start/End: Complemental strand, 28364062 - 28363968
Alignment:
Q  159 tttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaa 253  Q
    ||||| |||||||||| ||||| || ||||  ||||||  ||| |||||||||||||||||||| ||||||||||| ||||||| || |||||||    
T  28364062 ttttttttttgaagaaattaaattagcccatccaaattgacaccagagataatcgaatctgagaccttgaggaggagcacactcgcagatcccaa 28363968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 165 - 284
Target Start/End: Original strand, 15951259 - 15951378
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    |||| |||||| ||||||||||| |||||||| | || ||||| ||| |||  ||||| ||||||||||| ||||||| |||||| ||||  |||||||     
T  15951259 tttttaagaagctaaactaaccctctcaaattggtaccagagagaattgaacatgagaccttgaggaggagcacactcccaaatctcaagcttataccac 15951358  T
Q  265 taggccaacccaagtgggtt 284  Q
     ||| |||||||| ||||||    
T  15951359 aaggacaacccaactgggtt 15951378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 165 - 255
Target Start/End: Original strand, 23910070 - 23910158
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagt 255  Q
    ||||||||||| ||||||||||| |||||||| |||| ||||||  ||||| |||||| ||||||||||| ||||||| ||  ||||||||    
T  23910070 ttttgaagaagctaaactaaccccctcaaattggcaccagagat--tcgaacctgagaccttgaggaggagcacactcccaggtcccaagt 23910158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 278
Target Start/End: Complemental strand, 34444928 - 34444809
Alignment:
Q  159 tttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtcta 258  Q
    ||||| |||| |||||| |||| || |||||||||| |||| | || || ||||||| |||||| |||| |||||| |||||||| |  ||||||||| |    
T  34444928 tttttttttttaagaagctaaattagcccactcaaactagctccagggagaatcgaacctgagaccttggggaggagcacactctaaggtcccaagtcaa 34444829  T
Q  259 taccaataggccaacccaag 278  Q
    |||||  |||||||||||||    
T  34444828 taccaccaggccaacccaag 34444809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 165 - 287
Target Start/End: Original strand, 15496994 - 15497116
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    |||| |||||||||||||||||||   |||||| || |||| | |||||||  |||||||||| | || | ||||||||||| | ||||  | ||| ||     
T  15496994 tttttaagaagttaaactaacccatctaaattaacattagacagaatcgaacatgagatcttgtgaagtagcacactctcaagttccaaaccaatatcat 15497093  T
Q  265 taggccaacccaagtgggtttag 287  Q
    |||||||||||||||||||||||    
T  15497094 taggccaacccaagtgggtttag 15497116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 289
Target Start/End: Original strand, 14199948 - 14200028
Alignment:
Q  209 aatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtttagac 289  Q
    |||||||||||||| ||||||||||| ||||||| ||| || |||| |||||||  |||  |||||||| |||||||||||    
T  14199948 aatcgaatctgagaccttgaggaggagcacactcccaagtctcaagcctatacctctagagcaacccaaatgggtttagac 14200028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 284
Target Start/End: Complemental strand, 21418596 - 21418470
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||||| |||| || |||||   |||| ||||||| || |||||||  |||||  | |||||||| ||||||| ||| ||||||| |     
T  21418596 tttttttttttgaagaagctaaattagcccaccttaattggcactagggagaatcgaacttgagacatggaggaggagcacactcccaagtcccaagcca 21418497  T
Q  258 ataccaataggccaacccaagtgggtt 284  Q
    ||||||  |||||||||||| ||||||    
T  21418496 ataccaccaggccaacccaactgggtt 21418470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 32613100 - 32613214
Alignment:
Q  168 tgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaatag 267  Q
    |||||||| |||||||  ||| | |||||  ||||  ||| |||||||  |||||||||||| |||| ||||||| || | |||||||| ||||||  ||    
T  32613100 tgaagaagctaaactagtccatttaaattgacactgaagagaatcgaacatgagatcttgagaaggagcacactcccagaccccaagtcaataccaccag 32613199  T
Q  268 gccaacccaagtggg 282  Q
    |||||||||||||||    
T  32613200 gccaacccaagtggg 32613214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 11306133 - 11306194
Alignment:
Q  167 ttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttga 228  Q
    ||||||||| ||||||||||| |||||||| |||| ||||| ||||||| |||||| |||||    
T  11306133 ttgaagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctgagaccttga 11306194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 20863500 - 20863417
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactc 242  Q
    |||||| |||||||||||  || ||| ||||| |||||| ||| |||||| |||| ||||||||| ||||||||||| |||||||    
T  20863500 tttttttttttgaagaagccaa-ctagcccacccaaattggcattagagagaatcaaatctgagaccttgaggaggagcacactc 20863417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 245
Target Start/End: Complemental strand, 3925870 - 3925783
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctca 245  Q
    |||||| |||| |||||| ||||||||||| ||||||||   || ||||| ||| ||||||||||  ||||| |||| ||||||||||    
T  3925870 ttttttttttttaagaagctaaactaaccccctcaaattgataccagagagaattgaatctgagactttgagaaggaacacactctca 3925783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 254
Target Start/End: Original strand, 11103386 - 11103481
Alignment:
Q  159 tttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaag 254  Q
    ||||| ||| |||||||||||| || | |||| ||||| |||| ||||| ||||||||| |||| ||| ||||||| ||||||  ||| |||||||    
T  11103386 tttttttttagaagaagttaaattagctcacttaaattggcaccagagagaatcgaatcggagaccttaaggaggagcacactaccaagtcccaag 11103481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 284
Target Start/End: Complemental strand, 12633136 - 12633009
Alignment:
Q  158 ttttttatttt-gaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtc 256  Q
    ||||||||||| ||||||| |||| ||  ||||| |||||  || | |||| |||||||  |||||||| || ||||| ||||||| |||||||||||||    
T  12633136 ttttttattttagaagaagctaaattagtccacttaaattgacattggagagaatcgaacatgagatctcgaagaggagcacactcccaaatcccaagtc 12633037  T
Q  257 tataccaataggccaacccaagtgggtt 284  Q
     ||| ||   || |||||||||||||||    
T  12633036 aatatcaccgggacaacccaagtgggtt 12633009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 268
Target Start/End: Complemental strand, 20213160 - 20213057
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    ||||||||||| |||| || ||||| ||||||  ||||||||  ||||||| ||||||  |||||||||| ||||||| ||  |||||||  |||||||     
T  20213160 ttttgaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagacattgaggaggagcacactcccaggtcccaagcgtataccac 20213061  T
Q  265 tagg 268  Q
    ||||    
T  20213060 tagg 20213057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 268
Target Start/End: Complemental strand, 22107183 - 22107080
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    ||||||||||| |||| || ||||| ||||||  ||||||||  ||||||| ||||||  |||||||||| ||||||| ||  |||||||  |||||||     
T  22107183 ttttgaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagacattgaggaggagcacactcccaggtcccaagcgtataccac 22107084  T
Q  265 tagg 268  Q
    ||||    
T  22107083 tagg 22107080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 242
Target Start/End: Original strand, 2092495 - 2092565
Alignment:
Q  172 gaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactc 242  Q
    |||||||||||||||| |||||||||  || ||||| |||| ||| ||||| |||||| |||| |||||||    
T  2092495 gaagttaaactaaccccctcaaattaataccagagaaaatcaaatttgagaccttgagcaggagcacactc 2092565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 263
Target Start/End: Complemental strand, 6385981 - 6385883
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctatacca 263  Q
    |||| |||||| |||| || ||||| |||||||||||  |||| ||||||| |||||| ||| ||||||| |||| || ||  ||||||||| ||||||    
T  6385981 tttttaagaagctaaattagcccacccaaattagcaccggagagaatcgaacctgagaccttaaggaggagcacagtcccaggtcccaagtcaatacca 6385883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 284
Target Start/End: Original strand, 34877095 - 34877149
Alignment:
Q  230 gaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    ||||| |||| | ||| |||| |||||||||||| ||||||||||||||||||||    
T  34877095 gaggagcacattttcagatcctaagtctataccactaggccaacccaagtgggtt 34877149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 242
Target Start/End: Complemental strand, 98822 - 98745
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactc 242  Q
    |||| |||||| ||||||||||| ||||||||  || || ||||||| |||  ||||| ||||||||||| |||||||    
T  98822 tttttaagaagctaaactaaccctctcaaattgacattaaagataattgaacttgagaccttgaggaggaacacactc 98745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 285
Target Start/End: Complemental strand, 33549184 - 33549103
Alignment:
Q  204 gagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggttt 285  Q
    |||| ||||||| |||||| || |||||||| ||||||| ||  ||||||| | ||||||  || |||||||||||||||||    
T  33549184 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggttt 33549103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 8597697 - 8597773
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggagga 234  Q
    |||||| ||||||||||| |||| || ||||| |||||| ||||| |||| ||| |||  ||||| |||||||||||    
T  8597697 tttttttttttgaagaagctaaattagcccacccaaattggcactggagagaattgaacttgagaccttgaggagga 8597773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 158 - 286
Target Start/End: Original strand, 12234457 - 12234585
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| |||| |||||| |||| || ||||   |||||  |||| |||| ||||||| |||||| || |||  ||| ||||||| ||  |||||||||     
T  12234457 ttttttttttttaagaagctaaattatcccatctaaattgacactggagagaatcgaacctgagacctcgagagggagcacactcccaggtcccaagtca 12234556  T
Q  258 ataccaataggccaacccaagtgggttta 286  Q
    ||||||  ||||||||| |||||||||||    
T  12234557 ataccaccaggccaacctaagtgggttta 12234585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 32050357 - 32050397
Alignment:
Q  209 aatcgaatctgagatcttgaggaggatcacactctcaaatc 249  Q
    ||||| |||||||| ||||||||||||||||||| ||||||    
T  32050357 aatcggatctgagaccttgaggaggatcacactcccaaatc 32050397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 3e-24; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 159 - 284
Target Start/End: Complemental strand, 25627181 - 25627057
Alignment:
Q  159 tttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtcta 258  Q
    ||||| ||||||||||| ||||||||||| ||||||||  ||| ||||| ||||||| |||||| ||||||||||| ||||||| ||| | ||||| | |    
T  25627181 ttttttttttgaagaagctaaactaaccc-ctcaaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagccaa 25627083  T
Q  259 taccaataggccaacccaagtgggtt 284  Q
    ||||| ||||||||||||||||||||    
T  25627082 taccactaggccaacccaagtgggtt 25627057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 158 - 284
Target Start/End: Original strand, 21549088 - 21549213
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||||| ||||||||||| |||||||| |||||||||| |||||||  |||||  || ||||||| ||||||| ||  ||||||| |     
T  21549088 tttttttttttgaagaagctaaactaaccc-ctcaaattggcactagagaaaatcgaacttgagactttaaggaggagcacactcccaggtcccaagcca 21549186  T
Q  258 ataccaataggccaacccaagtgggtt 284  Q
    |||||| ||||||||||||||||||||    
T  21549187 ataccactaggccaacccaagtgggtt 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 165 - 284
Target Start/End: Complemental strand, 6844848 - 6844729
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    ||||||||||| |||||||| ||||  ||||| |||| ||||||||||||| || ||| || |||||||| ||||||| ||||| ||||||| ||||||     
T  6844848 ttttgaagaagctaaactaatccacctaaattggcacgagagataatcgaaccttagacctcgaggaggaacacactcccaaattccaagtcaataccac 6844749  T
Q  265 taggccaacccaagtgggtt 284  Q
      ||||||||||||||||||    
T  6844748 ctggccaacccaagtgggtt 6844729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 284
Target Start/End: Complemental strand, 19043582 - 19043458
Alignment:
Q  159 tttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtcta 258  Q
    ||||| ||||||||||| ||||||||||| |||||||| ||||||||||  || ||| ||||||  ||||| |||| ||||||| ||| | ||||||| |    
T  19043582 ttttttttttgaagaagctaaactaaccc-ctcaaattggcactagagaggattgaacctgagactttgagaaggaacacactcccaagttccaagtcaa 19043484  T
Q  259 taccaataggccaacccaagtgggtt 284  Q
    || || ||||||||||||||||||||    
T  19043483 tagcactaggccaacccaagtgggtt 19043458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 158 - 284
Target Start/End: Original strand, 43230724 - 43230852
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtc- 256  Q
    |||||| |||| |||||||||||||||| ||   |||||  ||| ||||| ||| |||||||||||||| ||||||| |||||||||| | |||||| |     
T  43230724 ttttttttttttaagaagttaaactaactcatctaaattgacacaagagagaattgaatctgagatcttaaggaggagcacactctcagaacccaagcca 43230823  T
Q  257 -tataccaataggccaacccaagtgggtt 284  Q
     ||||||| ||||||||||||||||||||    
T  43230824 atataccactaggccaacccaagtgggtt 43230852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 160 - 284
Target Start/End: Original strand, 7918421 - 7918545
Alignment:
Q  160 ttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctat 259  Q
    |||| ||||||||||| |||||||| || |||||||| |||| ||||| ||||||| || ||| |||||||||||   ||||| ||  | ||||| | ||    
T  7918421 tttttttttgaagaagctaaactaaacccctcaaattggcaccagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaat 7918520  T
Q  260 accaataggccaacccaagtgggtt 284  Q
    |||| ||||||||||||||||||||    
T  7918521 accactaggccaacccaagtgggtt 7918545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 182 - 285
Target Start/End: Original strand, 26078025 - 26078128
Alignment:
Q  182 taacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgg 281  Q
    |||||| |||||||| |||||||||| ||||||| |||||| ||||| ||| | || |||| ||| ||||||  | |||||| |||||||||||||||||    
T  26078025 taaccccctcaaattggcactagagagaatcgaacctgagaccttgaagagaagcatactcccaagtcccaaaccaataccactaggccaacccaagtgg 26078124  T
Q  282 gttt 285  Q
    ||||    
T  26078125 gttt 26078128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 165 - 284
Target Start/End: Complemental strand, 29075900 - 29075781
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    ||||||||||| |||| || ||||   ||||| |||| ||||| |||||||  |||||||| |||||||| ||||||| || |||||||| | ||||||     
T  29075900 ttttgaagaagctaaattagcccatctaaattggcaccagagagaatcgaacatgagatctcgaggaggagcacactcccagatcccaagccaataccac 29075801  T
Q  265 taggccaacccaagtgggtt 284  Q
    ||||| ||||||||||||||    
T  29075800 taggcaaacccaagtgggtt 29075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 165 - 260
Target Start/End: Complemental strand, 31074351 - 31074256
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctata 260  Q
    |||| |||||| |||||||| || || ||||| |||| ||||| ||||||| |||||||||||||||||| |||||||  |||||||||| |||||    
T  31074351 ttttaaagaagctaaactaatcctcttaaattggcaccagagagaatcgaacctgagatcttgaggaggaacacactccaaaatcccaagcctata 31074256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 14285266 - 14285160
Alignment:
Q  179 aactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaag 278  Q
    ||||||||| |||||||| |||| ||||| ||||||| |||||| ||||||||||| ||||||| ||  | ||||| | || ||| | ||||||||||||    
T  14285266 aactaaccccctcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggttccaagccaattccactcggccaacccaag 14285167  T
Q  279 tgggttt 285  Q
    |||||||    
T  14285166 tgggttt 14285160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 172 - 285
Target Start/End: Complemental strand, 34984918 - 34984805
Alignment:
Q  172 gaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggcca 271  Q
    |||| ||||| ||||| |||||||| |||| ||||| ||||||| || ||| ||||||||||| ||||||| ||  | ||||| | |||||| ||| |||    
T  34984918 gaagctaaaccaaccccctcaaattggcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggttccaagccaataccactagacca 34984819  T
Q  272 acccaagtgggttt 285  Q
    ||||||||||||||    
T  34984818 acccaagtgggttt 34984805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 157 - 284
Target Start/End: Complemental strand, 16773934 - 16773807
Alignment:
Q  157 attttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtc 256  Q
    ||||||| ||||||||||| |||| || |||||  ||||| |||  ||||| ||||||| |||||| || |||||||| ||||||| ||  |||||||||    
T  16773934 atttttttttttgaagaagctaaattagcccacctaaattggcatcagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtc 16773835  T
Q  257 tataccaataggccaacccaagtgggtt 284  Q
     ||||||  || ||||| ||||||||||    
T  16773834 aataccaccagaccaactcaagtgggtt 16773807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 158 - 284
Target Start/End: Original strand, 8278225 - 8278351
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||||| |||| || |||||  ||||  ||||  ||||||||| ||  |||||||| |||||||| ||||||| ||| ||||||| |     
T  8278225 tttttttttttgaagaagctaaattagcccacctaaatcggcaccggagataatcaaacttgagatctcgaggaggagcacactcccaagtcccaagcca 8278324  T
Q  258 ataccaataggccaacccaagtgggtt 284  Q
    ||||||  || ||||||||||||||||    
T  8278325 ataccatcagaccaacccaagtgggtt 8278351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 165 - 286
Target Start/End: Complemental strand, 16436735 - 16436616
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    |||||||||||||||| || | ||||||||||   ||| | || |||||||  ||||| ||||||||||| ||||||| ||| ||||||| | ||||||     
T  16436735 ttttgaagaagttaaattagctcactcaaattgatact-gtgaaaatcgaacatgagaccttgaggaggagcacactc-caagtcccaagccaataccac 16436638  T
Q  265 taggccaacccaagtgggttta 286  Q
    |||||||||||||||| |||||    
T  16436637 taggccaacccaagtgagttta 16436616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 17155949 - 17155872
Alignment:
Q  157 attttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggagga 234  Q
    |||||||||||||||||||||||| || |||||||||||| |||  | ||| |||| || |||||| |||||||||||    
T  17155949 attttttattttgaagaagttaaattagcccactcaaattggcagcacagagaatcaaacctgagaccttgaggagga 17155872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 192 - 281
Target Start/End: Complemental strand, 18437177 - 18437088
Alignment:
Q  192 aaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgg 281  Q
    ||||| |||||||||| ||||||| | || |  |||||||||| ||||||||||| ||||||||  |||||| |||||||||| ||||||    
T  18437177 aaattggcactagagagaatcgaacccgaaactttgaggaggagcacactctcaagtcccaagttaataccactaggccaacctaagtgg 18437088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 18595951 - 18596032
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcaca 239  Q
    |||||| ||||||| ||| ||||||||||| |||||||| |||| ||||| ||||||| || ||| ||||||||||| ||||    
T  18595951 tttttttttttgaataagctaaactaaccccctcaaattggcaccagagaaaatcgaacctaagaccttgaggaggagcaca 18596032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 286
Target Start/End: Original strand, 87388 - 87501
Alignment:
Q  172 gaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggcca 271  Q
    |||| |||| || ||||||||||||  |||| |||  |||| || |||||| ||||||||||| ||||||| || || ||||| | |||||| |||||||    
T  87388 gaagctaaattagcccactcaaattgacactggagg-aatcaaacctgagaccttgaggaggagcacactcccagattccaaggcaataccactaggcca 87486  T
Q  272 acccaagtgggttta 286  Q
    ||| |||||||||||    
T  87487 accgaagtgggttta 87501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 284
Target Start/End: Complemental strand, 16457936 - 16457810
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||||||||||||||  ||||||| ||||| |||||| ||||  | || ||| |||  ||||| ||||||||||| |||||||  |  ||||||| |     
T  16457936 ttttttattttgaagaacctaaactagcccacgcaaattggcaccggggagaattgaacatgagaccttgaggaggagcacactccaaggtcccaagcca 16457837  T
Q  258 ataccaataggccaacccaagtgggtt 284  Q
    ||||||  ||||||||| |||||||||    
T  16457836 ataccaccaggccaacctaagtgggtt 16457810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 203 - 241
Target Start/End: Complemental strand, 21086795 - 21086757
Alignment:
Q  203 agagataatcgaatctgagatcttgaggaggatcacact 241  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  21086795 agagataatcgaatctgagatcttgaggaggagcacact 21086757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 242
Target Start/End: Original strand, 37258318 - 37258400
Alignment:
Q  160 ttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactc 242  Q
    |||| |||| |||||| ||||||||||| ||||||||  ||| ||||| ||||||| |||| | ||||||||||| |||||||    
T  37258318 ttttttttttaagaagctaaactaaccccctcaaattgacaccagagagaatcgaacctgaaaccttgaggaggagcacactc 37258400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 22661331 - 22661214
Alignment:
Q  167 ttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaata 266  Q
    ||||||||| |||| |||| ||| ||||||||||   |||| ||| ||| |||||||||||||| ||   | ||||||| |||||||||| ||| ||  |    
T  22661331 ttgaagaagctaaattaactcacccaaattagcatcggagaaaattgaacctgagatcttgaggtggggtatactctcagatcccaagtcaatatcatca 22661232  T
Q  267 ggccaacccaagtgggtt 284  Q
    ||| ||||||||||||||    
T  22661231 ggctaacccaagtgggtt 22661214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 253
Target Start/End: Complemental strand, 12877812 - 12877724
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaa 253  Q
    ||||||||||| |||| || |||||  ||||||| || ||||| ||||||| ||||||  |||||||| | ||||||| ||||||||||    
T  12877812 ttttgaagaagctaaattagcccacctaaattagtaccagagagaatcgaacctgagacattgaggagaaacacactcccaaatcccaa 12877724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 285
Target Start/End: Original strand, 22020819 - 22020939
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    ||||||||||  |||| || |||||  |||||| |||| |||| ||||||||||||||  |  ||||||| ||||||| || ||||||||   ||||||     
T  22020819 ttttgaagaaactaaattagcccacctaaattaacactggagagaatcgaatctgagacttcaaggaggagcacactcccagatcccaagctaataccac 22020918  T
Q  265 taggccaacccaagtgggttt 285  Q
    || ||||||||||| ||||||    
T  22020919 tatgccaacccaagagggttt 22020939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 286
Target Start/End: Original strand, 30883208 - 30883276
Alignment:
Q  218 tgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggttta 286  Q
    ||||| ||||||||||| ||||||| ||  ||||||| | |||||| ||| ||||||||||||||||||    
T  30883208 tgagaccttgaggaggagcacactcccaggtcccaagccaataccactagaccaacccaagtgggttta 30883276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 17028225 - 17028340
Alignment:
Q  169 gaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaatagg 268  Q
    ||||||| |||| || |||||  |||||  ||||||||  |||| || |||||| ||||||||||| ||||||| ||| ||||||  | |||| | ||||    
T  17028225 gaagaagctaaattagcccacctaaattgacactagagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaacccaatacaactagg 17028324  T
Q  269 ccaacccaagtgggtt 284  Q
     |||||||||||||||    
T  17028325 tcaacccaagtgggtt 17028340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 284
Target Start/End: Complemental strand, 21589407 - 21589288
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    ||||||||||| ||||||| |||||  ||||| |||| ||||  ||||||| ||||||  | |||||| | || |||| ||  ||||||| | ||||||     
T  21589407 ttttgaagaagctaaactagcccacctaaattggcaccagagggaatcgaacctgagacatcgaggagtagcagactcccaggtcccaagccaataccac 21589308  T
Q  265 taggccaacccaagtgggtt 284  Q
     |||||||||||||||||||    
T  21589307 caggccaacccaagtgggtt 21589288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 285
Target Start/End: Complemental strand, 26598578 - 26598523
Alignment:
Q  230 gaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggttt 285  Q
    ||||| |||||||||| |||||||| | |||||| |||||||| ||||||||||||    
T  26598578 gaggagcacactctcagatcccaagccaataccactaggccaatccaagtgggttt 26598523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 18974067 - 18974005
Alignment:
Q  177 taaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcaca 239  Q
    |||||||||||||||||||| |||| || || ||||||| |||| | ||||||||||| ||||    
T  18974067 taaactaacccactcaaattggcaccagggagaatcgaacctgacaccttgaggaggagcaca 18974005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 285
Target Start/End: Original strand, 30735019 - 30735147
Alignment:
Q  160 ttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatctt---gaggaggatcacactctcaaatcccaagtc 256  Q
    |||| |||| |||||| ||||||||||| ||||||||  ||  |||| ||||||||  |||||| ||   |||||||| ||||||||||  |  ||||||    
T  30735019 ttttttttttaagaagctaaactaaccccctcaaattgacatcagaggtaatcgaacttgagattttgaggaggaggagcacactctcaggttacaagtc 30735118  T
Q  257 tataccaataggccaacccaagtgggttt 285  Q
     |||| | |||| ||||||||||||||||    
T  30735119 aatacgactaggtcaacccaagtgggttt 30735147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 234
Target Start/End: Original strand, 2269181 - 2269250
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggagga 234  Q
    ||||||||||| |||| |||||| ||||||||   |  |||||||||||||| ||||| |||||||||||    
T  2269181 ttttgaagaagctaaaataaccccctcaaattgttatcagagataatcgaatttgagaccttgaggagga 2269250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 284
Target Start/End: Original strand, 3252284 - 3252365
Alignment:
Q  203 agagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    ||||| ||||||| |||||| | |||||| ||   ||||| ||| || |||||| |||||| ||||||||||||||||||||    
T  3252284 agagagaatcgaacctgagagcctgaggaagagtgcactcccaagtctcaagtcaataccactaggccaacccaagtgggtt 3252365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 38299652 - 38299595
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgaga 222  Q
    ||||||||||| |||| || ||||| |||||||||||  |||| ||||||||||||||    
T  38299652 ttttgaagaagctaaattagcccacgcaaattagcaccggagaaaatcgaatctgaga 38299595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 285
Target Start/End: Complemental strand, 22737157 - 22737081
Alignment:
Q  209 aatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggttt 285  Q
    ||||||| ||||||  ||| |||||| ||||||  ||| ||||||| | |||||| ||| |||||||||||||||||    
T  22737157 aatcgaacctgagacattggggaggagcacacttccaagtcccaagccaataccactagaccaacccaagtgggttt 22737081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 30000235 - 30000167
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggagg 233  Q
    |||||||||||||||| ||||||||| ||||| |||  ||||| | ||||| |||||| || |||||||    
T  30000235 ttttgaagaagttaaattaacccacttaaattggcatcagagagagtcgaacctgagacctcgaggagg 30000167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 284
Target Start/End: Original strand, 40281044 - 40281168
Alignment:
Q  160 ttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctat 259  Q
    |||| |||| ||||| ||||| ||| ||||  ||||||||| ||||||  ||| ||||| | | ||| ||||||| |||||||||| ||||||| || ||    
T  40281044 ttttttttttaagaaattaaattaatccacctaaattagcattagagagtatcaaatctcaaaccttaaggaggagcacactctcatatcccaaatcaat 40281143  T
Q  260 accaataggccaacccaagtgggtt 284  Q
    ||||     ||||||||||||||||    
T  40281144 accacctaaccaacccaagtgggtt 40281168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 158 - 284
Target Start/End: Complemental strand, 18540424 - 18540298
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||||| |||| |||||| |||||||| |||| ||||| ||||||| |||||| ||||||||| |  |||||| ||  ||||||| |     
T  18540424 tttttttttttgaagaagctaaattaaccctctcaaattggcaccagagagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagcca 18540325  T
Q  258 ataccaataggccaacccaagtgggtt 284  Q
    |||||| ||||||||||||||||||||    
T  18540324 ataccactaggccaacccaagtgggtt 18540298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 165 - 284
Target Start/End: Complemental strand, 8059751 - 8059632
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    ||||||||||| ||||||| | ||||||||||  ||  || || ||| ||| |||||| |||||||||||||||||||||| || ||||||| ||||||     
T  8059751 ttttgaagaagctaaactagctcactcaaattgacatcagggagaatggaacctgagaccttgaggaggatcacactctcacatgccaagtcaataccat 8059652  T
Q  265 taggccaacccaagtgggtt 284  Q
     |||||||||||||||||||    
T  8059651 caggccaacccaagtgggtt 8059632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 165 - 284
Target Start/End: Complemental strand, 11819895 - 11819776
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    ||||||||||| |||| || ||||| ||||||  ||||||||  ||||||| |||||| ||||||||||| ||||||| ||| ||||||| ||||||||     
T  11819895 ttttgaagaagctaaattagcccacccaaattgacactagagtgaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccac 11819796  T
Q  265 taggccaacccaagtgggtt 284  Q
    |||| |||||||| ||||||    
T  11819795 tagggcaacccaaatgggtt 11819776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 158 - 285
Target Start/End: Original strand, 44780064 - 44780191
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||||| |||| || ||||| ||||||  ||||||||  |||| || |||||| ||||||||||| ||||||| ||| ||||||| |     
T  44780064 tttttttttttgaagaagctaaattagcccacccaaattgacactagagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaagcca 44780163  T
Q  258 ataccaataggccaacccaagtgggttt 285  Q
    || ||| |||||||||||||||||||||    
T  44780164 atgccactaggccaacccaagtgggttt 44780191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 199 - 288
Target Start/End: Original strand, 19703478 - 19703567
Alignment:
Q  199 cactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtttaga 288  Q
    |||||| || ||||||| |||||| ||||||||||| ||||||||||  ||||||| | |||||| ||||||||||||||||||||||||    
T  19703478 cactagggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggccaacccaagtgggtttaga 19703567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 160 - 291
Target Start/End: Complemental strand, 16852464 - 16852333
Alignment:
Q  160 ttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctat 259  Q
    |||| ||||||||||| |||| || |||||  ||||| ||||||  || ||||||| |||||| || |||||||| ||||||| ||  ||||||| | ||    
T  16852464 tttttttttgaagaagctaaaatagcccacctaaattggcactaaggagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaat 16852365  T
Q  260 accaataggccaacccaagtgggtttagacat 291  Q
    |||| |||||||||||||||||||||| ||||    
T  16852364 accactaggccaacccaagtgggtttaaacat 16852333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 158 - 241
Target Start/End: Complemental strand, 33017339 - 33017257
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacact 241  Q
    |||||| ||||||||||||||||||||||| |||||||| |||| ||||| ||||||| |||||| ||||||||||| ||||||    
T  33017339 tttttttttttgaagaagttaaactaaccc-ctcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacact 33017257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 285
Target Start/End: Complemental strand, 12988554 - 12988427
Alignment:
Q  157 attttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtc 256  Q
    ||||||| ||||||||||| ||||||||||| |||||||| |||| |||||  |||||| |||| | ||||||||||| ||||||  ||  | ||||| |    
T  12988554 atttttttttttgaagaagctaaactaaccc-ctcaaattggcaccagagaggatcgaacctgaaaccttgaggaggagcacacttccaggttccaagcc 12988456  T
Q  257 tataccaataggccaacccaagtgggttt 285  Q
     |||||| |||||||| ||||||||||||    
T  12988455 aataccactaggccaatccaagtgggttt 12988427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 166 - 284
Target Start/End: Complemental strand, 29431129 - 29431011
Alignment:
Q  166 tttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaat 265  Q
    |||||||||| |||| || ||||||||||||||||| | ||| ||||||| |||||  ||  ||||||| ||||||| ||| ||||||| | |||||       
T  29431129 tttgaagaagctaaattagcccactcaaattagcaccaaagagaatcgaacctgaggcctcaaggaggagcacactcccaagtcccaagccaataccgcc 29431030  T
Q  266 aggccaacccaagtgggtt 284  Q
    |||||||||||||||||||    
T  29431029 aggccaacccaagtgggtt 29431011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 209 - 286
Target Start/End: Original strand, 3826778 - 3826855
Alignment:
Q  209 aatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggttta 286  Q
    ||||||| ||||||||| | |||||| |||||||||||||  |||| | |||||| ||||||||||||||||||||||    
T  3826778 aatcgaacctgagatctcgtggaggagcacactctcaaatggcaagccaataccactaggccaacccaagtgggttta 3826855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 274
Target Start/End: Original strand, 29915877 - 29915986
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    ||||||||||| |||||||| |  || ||||| |||||||||| |||||||| ||||| ||||||||||| |  |||| || ||||||| ||||||| |     
T  29915877 ttttgaagaagctaaactaaacaccttaaattggcactagagaaaatcgaatatgagaccttgaggaggagcgtactcccagatcccaaatctatacaac 29915976  T
Q  265 taggccaacc 274  Q
    ||||||||||    
T  29915977 taggccaacc 29915986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 158 - 284
Target Start/End: Complemental strand, 27750856 - 27750730
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| |||| |||||| |||| ||  |||  ||||||  ||||||||  ||||||| |||||| ||||||||||| ||||||| ||| ||||||| ||    
T  27750856 ttttttttttttaagaagctaaattagtccatccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcct 27750757  T
Q  258 ataccaataggccaacccaagtgggtt 284  Q
    ||||||  ||| |||||||| ||||||    
T  27750756 ataccacgagggcaacccaaatgggtt 27750730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 203 - 284
Target Start/End: Original strand, 23361644 - 23361725
Alignment:
Q  203 agagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    ||||| ||| ||| |||||| ||||||||||| ||||||| || |||||||||| ||||||  ||| |||||||||||||||    
T  23361644 agagagaattgaacctgagaccttgaggaggagcacactcccatatcccaagtcaataccaccaggtcaacccaagtgggtt 23361725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 284
Target Start/End: Original strand, 20994414 - 20994534
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgagg-aggatcacactctcaaatcccaagtctatacca 263  Q
    |||| |||||| |||| || ||||  |||||| | || ||||||||||||  ||||||  |||||| |||| ||||||| ||  ||||||||| ||||||    
T  20994414 tttttaagaagctaaattagcccatccaaattggtaccagagataatcgatcctgagactttgagggaggagcacactcccaggtcccaagtcaatacca 20994513  T
Q  264 ataggccaacccaagtgggtt 284  Q
     ||||||||||||||||||||    
T  20994514 ctaggccaacccaagtgggtt 20994534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 282
Target Start/End: Complemental strand, 2203617 - 2203494
Alignment:
Q  159 tttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtcta 258  Q
    ||||| ||||||| ||| |||| || ||||| |||||| ||||  | || ||| ||  |||||| ||||||||||| ||||||| ||  ||||||| | |    
T  2203617 ttttttttttgaataagctaaattagcccacccaaattggcaccggggagaattgaccctgagaccttgaggaggagcacactcccaggtcccaagccaa 2203518  T
Q  259 taccaataggccaacccaagtggg 282  Q
    ||||| ||||||||||||||||||    
T  2203517 taccactaggccaacccaagtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 30483845 - 30483960
Alignment:
Q  169 gaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaatagg 268  Q
    ||||||| |||| ||  ||| ||||||| |||| ||||| ||| ||| ||||||   ||||||||| ||||||| || |||||||| | |||||| | ||    
T  30483845 gaagaagataaattagtccattcaaattggcacaagagagaattgaacctgagactctgaggaggagcacactcccatatcccaagccaataccactggg 30483944  T
Q  269 ccaacccaagtgggtt 284  Q
    ||||||||||||||||    
T  30483945 ccaacccaagtgggtt 30483960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 3624660 - 3624582
Alignment:
Q  204 gagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtggg 282  Q
    |||| ||||||| |||||| ||||| ||||| ||||||| ||  ||||||| | |||||| ||||||||||||||||||    
T  3624660 gagagaatcgaacctgagaccttgaagaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 3624582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 284
Target Start/End: Original strand, 6569721 - 6569847
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| |||| |||||| ||||||||||| ||||||||  ||| | ||| |||||||  ||| | ||  ||||||| ||||||| || |||||||| |     
T  6569721 ttttttttttttaagaagctaaactaaccccctcaaattgacaccaaagagaatcgaacatgaaacctaaaggaggagcacactcccagatcccaagcca 6569820  T
Q  258 ataccaataggccaacccaagtgggtt 284  Q
    ||| || |||||||||| |||||||||    
T  6569821 atatcactaggccaacctaagtgggtt 6569847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 284
Target Start/End: Original strand, 33727823 - 33727949
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| |||| |||||| |||| || ||||  ||||||  ||||||||  ||||||| |||||| ||||||||||| ||||||  ||| || |||  ||    
T  33727823 ttttttttttttaagaagctaaattagcccatccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacacttccaagtctcaaacct 33727922  T
Q  258 ataccaataggccaacccaagtgggtt 284  Q
    |||||| |||| |||||||| ||||||    
T  33727923 ataccactagggcaacccaaatgggtt 33727949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 29956346 - 29956407
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctg 219  Q
    |||||| ||||||||||| ||||||||||| |||||||| |||| ||||| ||| |||||||    
T  29956346 tttttttttttgaagaagctaaactaaccccctcaaattggcaccagagagaattgaatctg 29956407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 253
Target Start/End: Original strand, 3305145 - 3305233
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaa 253  Q
    ||||| ||||| |||| || |||||  ||||| |||| |||||||||||||| ||||| ||||||||||| ||| ||| || |||||||    
T  3305145 ttttgcagaagataaattagcccacctaaattggcaccagagataatcgaatttgagaccttgaggaggagcacgctcccagatcccaa 3305233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 6436556 - 6436631
Alignment:
Q  209 aatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    |||||||||||||| |||| |||||| |||||||  || ||||||| | ||||||  ||| |||||||||||||||    
T  6436556 aatcgaatctgagaccttgcggaggagcacactcctaagtcccaagccaataccaccagggcaacccaagtgggtt 6436631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 284
Target Start/End: Original strand, 11518822 - 11518953
Alignment:
Q  153 gaacattttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatccca 252  Q
    |||| |||||| ||||||| ||  |||| || ||||||||||||  || || ||  ||||||| || ||| ||||||||||   |||||| ||| | |||    
T  11518822 gaacttttttttttttgaataaactaaattagcccactcaaattgacattatagtgaatcgaacctaagaccttgaggaggggtacactcccaagttcca 11518921  T
Q  253 agtctataccaataggccaacccaagtgggtt 284  Q
    || |||||||| ||||| ||||||||||||||    
T  11518922 agcctataccactaggctaacccaagtgggtt 11518953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 285
Target Start/End: Complemental strand, 28783186 - 28783059
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||||| |||| || ||||| |||||| ||||    || |||||||  ||||| ||||||||||| ||||||| ||  || |||| |     
T  28783186 tttttttttttgaagaagctaaattagcccacccaaattggcaccgaggagaatcgaacatgagaccttgaggaggagcacactcccaggtctcaagcca 28783087  T
Q  258 ataccaataggccaacccaagtgggttt 285  Q
    ||||||  | ||||||||||||||||||    
T  28783086 ataccaccaagccaacccaagtgggttt 28783059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 287
Target Start/End: Original strand, 35641897 - 35641980
Alignment:
Q  204 gagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtttag 287  Q
    |||| ||||||| ||||||  | |||||||| ||||||| |||||| |||| | ||||||  || |||||||||||||||||||    
T  35641897 gagagaatcgaacctgagacatcgaggaggagcacactcccaaatctcaagccgataccaccagaccaacccaagtgggtttag 35641980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 286
Target Start/End: Complemental strand, 13129792 - 13129666
Alignment:
Q  160 ttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctat 259  Q
    |||| ||||||| ||| |||| ||| |||  |||||| |||| ||||| ||||||| |||| | ||||||||||| | ||||| ||| ||||||  | ||    
T  13129792 tttttttttgaataagctaaattaatccatccaaattggcaccagagagaatcgaacctgaaaccttgaggaggagcgcactcccaagtcccaaaccaat 13129693  T
Q  260 accaataggccaacccaagtgggttta 286  Q
     ||| | ||| ||||||||||||||||    
T  13129692 gccactgggctaacccaagtgggttta 13129666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 284
Target Start/End: Complemental strand, 26688991 - 26688865
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| |||| |||||| ||||||| ||||| ||||||  ||||||  | ||  ||| |||||| ||||||||||| |||||||  |  ||||||| |     
T  26688991 ttttttttttttaagaagctaaactagcccacccaaattgacactaggaagaactgaacctgagaccttgaggaggagcacactccaaggtcccaagcca 26688892  T
Q  258 ataccaataggccaacccaagtgggtt 284  Q
    | ||||  |||||||||||||||||||    
T  26688891 acaccaccaggccaacccaagtgggtt 26688865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 242
Target Start/End: Complemental strand, 6536635 - 6536562
Alignment:
Q  169 gaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactc 242  Q
    ||||||| |||| ||||||||  ||||| |||| ||||| ||| ||| |||||| ||||||||||| |||||||    
T  6536635 gaagaagctaaattaacccacctaaattggcaccagagagaattgaacctgagaccttgaggaggagcacactc 6536562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 286
Target Start/End: Complemental strand, 18897241 - 18897164
Alignment:
Q  209 aatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggttta 286  Q
    |||||||  ||||| ||||||||||| |||||||| |  ||||||  | | |||| ||||||||||||||||||||||    
T  18897241 aatcgaacatgagaccttgaggaggagcacactctaaggtcccaaaccaacaccactaggccaacccaagtgggttta 18897164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 27871795 - 27871718
Alignment:
Q  157 attttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggagga 234  Q
    ||||||| ||||||||||||||||||| | ||||||||||   | |||||| |||||||  |||||  ||||||||||    
T  27871795 atttttttttttgaagaagttaaactagctcactcaaattgatattagagagaatcgaacttgagactttgaggagga 27871718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 27979283 - 27979226
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaa 215  Q
    |||||| |||||||||||||||| || ||||  ||||||  |||||||||||||||||    
T  27979283 tttttttttttgaagaagttaaattagcccatccaaattgacactagagataatcgaa 27979226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 28036552 - 28036495
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaa 215  Q
    |||||| |||||||||||||||| || ||||  ||||||  |||||||||||||||||    
T  28036552 tttttttttttgaagaagttaaattagcccatccaaattgacactagagataatcgaa 28036495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 37663960 - 37664009
Alignment:
Q  182 taacccactcaaattagcactagagataatcgaatctgagatcttgagga 231  Q
    |||||| ||||||||||||||||||| ||||||||| |||| ||| ||||    
T  37663960 taaccccctcaaattagcactagagagaatcgaatccgagaccttaagga 37664009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 285
Target Start/End: Complemental strand, 4830554 - 4830486
Alignment:
Q  217 ctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggttt 285  Q
    |||||| || |||||||| |||||||||| |||||||    ||||||  ||||||||||||||||||||    
T  4830554 ctgagacctcgaggaggaacacactctcagatcccaaacaaataccaccaggccaacccaagtgggttt 4830486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 13456468 - 13456532
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgag 229  Q
    |||||||||||| ||||||  | ||| |||||  ||||||||| |||||||||||||| ||||||    
T  13456468 ttttgaagaagtcaaactagtcgactgaaattgacactagagagaatcgaatctgagaccttgag 13456532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 24675507 - 24675555
Alignment:
Q  203 agagataatcgaatctgagatcttgaggaggatcacactctcaaatccc 251  Q
    ||||| |||||||||||||| |||||| |||| |||||||||| |||||    
T  24675507 agagaaaatcgaatctgagaccttgagaaggagcacactctcagatccc 24675555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 244
Target Start/End: Original strand, 31408074 - 31408158
Alignment:
Q  160 ttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctc 244  Q
    |||| |||| |||||| |||| |||||| || |||||  || |||||| ||||||| |||| | ||||||||||| |||||||||    
T  31408074 ttttttttttaagaagctaaattaacccccttaaattgacattagagagaatcgaacctgaaaccttgaggaggagcacactctc 31408158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 284
Target Start/End: Original strand, 43968982 - 43969074
Alignment:
Q  192 aaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaataggccaacccaagtgggtt 284  Q
    |||||| ||| |||||||||||||||||||| ||   |||||| |||||||  ||  |||||| | ||||||  | |||||||||||||||||    
T  43968982 aaattaacaccagagataatcgaatctgagacctcagggaggagcacactcctaagccccaagccaataccatcatgccaacccaagtgggtt 43969074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 24168 - 24053
Alignment:
Q  169 gaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaatagg 268  Q
    |||||||||||| || |||||||||||| |||  ||||||||||||| |||| |  | || ||||| |||||||  || ||||||||| |||||| ||||    
T  24168 gaagaagttaaattagcccactcaaattggcatcagagataatcgaacctgacacttcgaagaggagcacactcctaagtcccaagtcaataccattagg 24069  T
Q  269 ccaacccaagtgggtt 284  Q
    ||||||||||||||||    
T  24068 ccaacccaagtgggtt 24053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 94923 - 95044
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| |||| |||||| |||||||||||  | ||||| |||| ||||||||| ||| |||||| ||||||||||| ||||||| ||  | ||||| |     
T  94923 ttttttttttttaagaagctaaactaaccc--ttaaattggcaccagagataattgaacctgagaccttgaggaggagcacactcccaggttccaagcca 95020  T
Q  258 ataccaataggccaacccaagtgg 281  Q
    |||||| |||||||||||||||||    
T  95021 ataccactaggccaacccaagtgg 95044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 284
Target Start/End: Complemental strand, 460007 - 459883
Alignment:
Q  160 ttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctat 259  Q
    |||| |||| |||||| |||| ||||||||  ||||| ||||  |||| |||  ||||| | |||| || ||| | |||||| |||||||||||  | ||    
T  460007 ttttttttttaagaagataaattaacccacctaaattggcaccggagagaattaaatctaaaatctcgaagagaagcacactttcaaatcccaaaccaat 459908  T
Q  260 accaataggccaacccaagtgggtt 284  Q
    |||| |||||||||| |||||||||    
T  459907 accattaggccaaccaaagtgggtt 459883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 156 - 273
Target Start/End: Original strand, 19911 - 20027
Alignment:
Q  156 cattttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagt 255  Q
    |||||||| ||||||| ||| ||||||||||| ||||||||| ||| ||||| ||||||| |||||| ||||||||||| || |||| ||  | |||||     
T  19911 catttttttttttgaaaaagctaaactaaccc-ctcaaattaacaccagagagaatcgaacctgagaccttgaggaggagcatactcccaggttccaagc 20009  T
Q  256 ctataccaataggccaac 273  Q
    | |||||| |||||||||    
T  20010 caataccactaggccaac 20027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 241
Target Start/End: Original strand, 81514 - 81597
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacact 241  Q
    |||||| |||| |||||||||||||||| | |||||||| |||  || || |||||||||||||| ||||||||||| ||||||    
T  81514 ttttttttttttaagaagttaaactaactccctcaaattggcatcagggagaatcgaatctgagaccttgaggaggagcacact 81597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 158 - 284
Target Start/End: Original strand, 41583 - 41709
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtct 257  Q
    |||||| ||||||||| | |||| || ||||| ||||||  ||  ||||| ||| ||| |||||| || |||||||| || ||||||| ||| |||| |     
T  41583 tttttttttttgaagaggctaaattagcccacccaaattgacatcagagagaattgaacctgagacctcgaggaggagcatactctcagatctcaagcca 41682  T
Q  258 ataccaataggccaacccaagtgggtt 284  Q
    |||||| ||||||||||||||||||||    
T  41683 ataccactaggccaacccaagtgggtt 41709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 284
Target Start/End: Original strand, 42472 - 42596
Alignment:
Q  159 tttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtcta 258  Q
    ||||| ||||||||||| |||| |||||| || ||||| |||| | ||| ||||||| ||||||   ||||||||| || |||| || || ||||||| |    
T  42472 ttttttttttgaagaagctaaattaaccc-cttaaattggcaccaaagagaatcgaacctgagactctgaggaggagcatactcccagattccaagtcaa 42570  T
Q  259 taccaataggccaacccaagtgggtt 284  Q
    ||||| ||||||||||||| ||||||    
T  42571 taccactaggccaacccaactgggtt 42596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 254
Target Start/End: Complemental strand, 49431 - 49336
Alignment:
Q  159 tttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaag 254  Q
    ||||| |||| ||||||||||| ||||||||| |||||  |||  |||| ||||||| |||| | || || ||||| |||||||||||||||||||    
T  49431 tttttttttttaagaagttaaattaacccacttaaattgacaccggagagaatcgaacctgatacctcgaagaggagcacactctcaaatcccaag 49336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 10688 - 10623
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgagga 231  Q
    |||| |||||||||||||||||| |||||||| |||| | ||| ||| |||||||||||||||||||    
T  10688 tttttaagaagttaaactaaccc-ctcaaattggcaccaaagagaattgaatctgagatcttgagga 10623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 277
Target Start/End: Original strand, 6879 - 6988
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    ||||||||||| |||| || ||||||||||||  ||| ||||||   |||| ||||||  |||||||||| ||||||| | | ||||||| | ||||||     
T  6879 ttttgaagaagctaaattagcccactcaaattgacaccagagat---cgaacctgagactttgaggaggagcacactccccagtcccaagccaataccac 6975  T
Q  265 taggccaacccaa 277  Q
    |||||||||||||    
T  6976 taggccaacccaa 6988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 276
Target Start/End: Complemental strand, 4459 - 4348
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    ||||||||||| |||| ||  |||| ||||||  ||||||||  ||||||| || | | ||| || |||| ||||||| ||||||||||| ||||||||     
T  4459 ttttgaagaagctaaattagtccacccaaattgacactagagggaatcgaacctaaaaccttaagaaggagcacactcccaaatcccaagcctataccac 4360  T
Q  265 taggccaaccca 276  Q
    |||| |||||||    
T  4359 tagggcaaccca 4348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 284
Target Start/End: Original strand, 15272 - 15399
Alignment:
Q  157 attttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtc 256  Q
    |||||||  |||||||||| |||| || |||||  ||||| |||   |||| ||||||| |||||| || |||||||| ||||||| ||  ||||||| |    
T  15272 atttttttctttgaagaagctaaattagcccacctaaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagcc 15371  T
Q  257 tataccaataggccaacccaagtgggtt 284  Q
     ||||||  || ||||||||||||||||    
T  15372 aataccaccagaccaacccaagtgggtt 15399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 42618 - 42693
Alignment:
Q  162 ttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatca 237  Q
    ||||||||||||||||||| || |||||  |||||  ||| | ||| |||||||  ||||||||||||||||||||    
T  42618 ttattttgaagaagttaaattagcccacctaaattgacaccatagagaatcgaacttgagatcttgaggaggatca 42693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 284
Target Start/End: Complemental strand, 17180 - 17062
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctataccaa 264  Q
    |||| ||||||||||||||| |||| ||||||  ||   |||| ||||||| |||| ||||||| ||||| |||||||| || ||||||||| | ||||     
T  17180 ttttaaagaagttaaactaa-ccacccaaattgacatcggagagaatcgaacctgaaatcttgaagaggaacacactctaaactcccaagtcaacaccag 17082  T
Q  265 taggccaacccaagtgggtt 284  Q
     || ||||||||| ||||||    
T  17081 cagaccaacccaaatgggtt 17062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 263
Target Start/End: Original strand, 25304 - 25402
Alignment:
Q  165 ttttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactctcaaatcccaagtctatacca 263  Q
    ||||||||||| |||| || | || |||||||  ||| ||||||||||||| |||||| |||||| |||| ||||||| ||| || |||| | ||||||    
T  25304 ttttgaagaagctaaaatagctcattcaaattgacaccagagataatcgaacctgagaccttgagaaggagcacactcccaagtctcaagccaatacca 25402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 158 - 242
Target Start/End: Original strand, 45709 - 45793
Alignment:
Q  158 ttttttattttgaagaagttaaactaacccactcaaattagcactagagataatcgaatctgagatcttgaggaggatcacactc 242  Q
    |||||| |||| ||||||||||||||||||||  |||||  ||| ||||| |||||||  ||||| ||  ||||||| |||||||    
T  45709 ttttttttttttaagaagttaaactaacccacctaaattgacaccagagagaatcgaacatgagacctcaaggaggaacacactc 45793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University