View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3002_high_88 (Length: 271)

Name: NF3002_high_88
Description: NF3002
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3002_high_88
NF3002_high_88
[»] chr8 (59 HSPs)
chr8 (53-197)||(40683225-40683369)
chr8 (201-270)||(4995016-4995085)
chr8 (200-271)||(33357496-33357568)
chr8 (196-271)||(38862921-38862997)
chr8 (201-271)||(20386788-20386859)
chr8 (202-271)||(20385568-20385638)
chr8 (202-271)||(38956030-38956100)
chr8 (200-268)||(16388581-16388650)
chr8 (202-271)||(34685616-34685685)
chr8 (202-270)||(39071676-39071745)
chr8 (200-271)||(7313363-7313435)
chr8 (200-271)||(13186417-13186489)
chr8 (200-271)||(23663543-23663615)
chr8 (204-271)||(40317966-40318034)
chr8 (201-271)||(8316652-8316723)
chr8 (200-270)||(23663873-23663944)
chr8 (201-255)||(7306398-7306452)
chr8 (201-255)||(8316963-8317017)
chr8 (200-254)||(12198948-12199002)
chr8 (200-254)||(12443376-12443430)
chr8 (202-271)||(31608871-31608941)
chr8 (200-271)||(1425051-1425123)
chr8 (203-271)||(30712075-30712143)
chr8 (203-271)||(30719852-30719920)
chr8 (200-271)||(34060487-34060559)
chr8 (204-271)||(34177328-34177396)
chr8 (202-254)||(42803594-42803646)
chr8 (201-252)||(13186059-13186110)
chr8 (200-270)||(23698603-23698674)
chr8 (201-271)||(34061686-34061757)
chr8 (200-254)||(12273229-12273283)
chr8 (202-252)||(16388904-16388954)
chr8 (201-271)||(31608526-31608596)
chr8 (200-254)||(39072017-39072071)
chr8 (201-270)||(40318323-40318393)
chr8 (202-254)||(2535926-2535978)
chr8 (202-254)||(4406036-4406088)
chr8 (200-271)||(4994655-4994727)
chr8 (204-271)||(12272920-12272988)
chr8 (201-253)||(36928853-36928905)
chr8 (202-249)||(30459371-30459418)
chr8 (202-252)||(2534695-2534745)
chr8 (204-254)||(9065667-9065717)
chr8 (194-252)||(34176437-34176494)
chr8 (195-253)||(35756577-35756634)
chr8 (200-246)||(36186448-36186494)
chr8 (191-271)||(7294091-7294171)
chr8 (201-254)||(22915734-22915787)
chr8 (200-271)||(7295285-7295357)
chr8 (204-271)||(12199264-12199332)
chr8 (204-271)||(12443692-12443760)
chr8 (203-270)||(1425381-1425448)
chr8 (202-253)||(38955703-38955754)
chr8 (202-271)||(5960046-5960116)
chr8 (201-255)||(9065745-9065799)
chr8 (206-271)||(36186105-36186171)
chr8 (202-254)||(23698308-23698361)
chr8 (202-246)||(38862618-38862662)
chr8 (5-41)||(40683143-40683179)
[»] chr1 (75 HSPs)
chr1 (201-271)||(17661851-17661921)
chr1 (191-271)||(43759180-43759261)
chr1 (200-271)||(30711685-30711757)
chr1 (200-271)||(36694280-36694352)
chr1 (200-271)||(36710381-36710453)
chr1 (200-271)||(37578190-37578262)
chr1 (200-271)||(5734008-5734079)
chr1 (201-271)||(5735069-5735140)
chr1 (201-271)||(6367920-6367991)
chr1 (200-255)||(23209702-23209757)
chr1 (200-270)||(36694607-36694678)
chr1 (200-270)||(36710708-36710779)
chr1 (202-271)||(24009575-24009645)
chr1 (202-271)||(34850423-34850493)
chr1 (197-270)||(41098728-41098802)
chr1 (202-267)||(46899061-46899127)
chr1 (202-270)||(6367562-6367631)
chr1 (200-253)||(19515817-19515870)
chr1 (203-271)||(35152688-35152757)
chr1 (200-271)||(13914066-13914138)
chr1 (202-254)||(34464449-34464501)
chr1 (194-254)||(34464825-34464885)
chr1 (200-270)||(35473629-35473700)
chr1 (201-271)||(40772817-40772888)
chr1 (209-271)||(49723084-49723147)
chr1 (202-271)||(183221-183291)
chr1 (202-271)||(26024750-26024820)
chr1 (202-271)||(34849011-34849081)
chr1 (200-254)||(35152341-35152395)
chr1 (202-271)||(47999123-47999193)
chr1 (203-271)||(13300262-13300331)
chr1 (201-254)||(25647883-25647936)
chr1 (202-270)||(31197065-31197134)
chr1 (191-252)||(37578570-37578631)
chr1 (202-270)||(40772507-40772576)
chr1 (205-253)||(40435348-40435396)
chr1 (200-271)||(42533022-42533094)
chr1 (200-271)||(51015631-51015703)
chr1 (201-271)||(1103819-1103890)
chr1 (201-252)||(17662228-17662279)
chr1 (201-271)||(19017628-19017699)
chr1 (200-270)||(19017988-19018059)
chr1 (201-271)||(48779477-48779548)
chr1 (201-271)||(7821312-7821382)
chr1 (201-270)||(26024422-26024492)
chr1 (202-271)||(32917618-32917688)
chr1 (206-271)||(41099091-41099157)
chr1 (200-254)||(47999468-47999522)
chr1 (201-255)||(51019724-51019778)
chr1 (203-271)||(4960541-4960610)
chr1 (205-254)||(17692561-17692610)
chr1 (204-253)||(42248475-42248524)
chr1 (200-271)||(1841816-1841888)
chr1 (203-270)||(13914426-13914494)
chr1 (202-250)||(30711327-30711375)
chr1 (204-271)||(40439547-40439615)
chr1 (201-253)||(46899977-46900029)
chr1 (202-249)||(6518177-6518224)
chr1 (201-271)||(7820953-7821024)
chr1 (205-271)||(40210373-40210440)
chr1 (202-271)||(14879316-14879386)
chr1 (205-270)||(46163033-46163099)
chr1 (201-250)||(7231629-7231678)
chr1 (191-271)||(19322881-19322962)
chr1 (204-253)||(40210747-40210796)
chr1 (200-270)||(183550-183622)
chr1 (205-249)||(23209365-23209408)
chr1 (205-253)||(24009918-24009966)
chr1 (202-250)||(26234430-26234478)
chr1 (201-271)||(17691218-17691289)
chr1 (200-234)||(30322761-30322795)
chr1 (200-253)||(1841457-1841510)
chr1 (211-252)||(14878980-14879021)
chr1 (200-249)||(42534397-42534445)
chr1 (223-270)||(26234203-26234251)
[»] chr5 (72 HSPs)
chr5 (201-271)||(42265734-42265805)
chr5 (191-271)||(14194412-14194493)
chr5 (201-271)||(32242600-32242670)
chr5 (200-271)||(28770867-28770939)
chr5 (191-254)||(5993879-5993941)
chr5 (201-271)||(11762075-11762146)
chr5 (201-271)||(18247434-18247505)
chr5 (200-271)||(20814134-20814205)
chr5 (200-270)||(20814494-20814565)
chr5 (205-271)||(21257519-21257586)
chr5 (202-271)||(17202757-17202827)
chr5 (202-271)||(27587473-27587543)
chr5 (198-271)||(28269418-28269492)
chr5 (191-252)||(6150443-6150504)
chr5 (201-254)||(16157231-16157284)
chr5 (191-271)||(35512472-35512553)
chr5 (204-271)||(19892310-19892378)
chr5 (200-252)||(20840531-20840583)
chr5 (200-271)||(37991197-37991269)
chr5 (201-268)||(39453660-39453728)
chr5 (201-271)||(3528872-3528943)
chr5 (203-254)||(18247087-18247138)
chr5 (204-270)||(39453302-39453369)
chr5 (205-271)||(43159172-43159239)
chr5 (202-271)||(5024019-5024089)
chr5 (200-254)||(6150796-6150850)
chr5 (205-271)||(11047795-11047861)
chr5 (201-270)||(11761748-11761818)
chr5 (201-255)||(24547500-24547554)
chr5 (200-254)||(38475375-38475429)
chr5 (201-254)||(18670201-18670254)
chr5 (202-270)||(27587148-27587217)
chr5 (202-254)||(186795-186847)
chr5 (202-254)||(3529218-3529270)
chr5 (205-253)||(5024395-5024443)
chr5 (200-252)||(20840815-20840867)
chr5 (200-271)||(29646360-29646432)
chr5 (205-271)||(5835784-5835851)
chr5 (207-254)||(8322780-8322827)
chr5 (205-271)||(11740690-11740757)
chr5 (200-270)||(35512146-35512217)
chr5 (205-255)||(13362603-13362653)
chr5 (200-254)||(13962862-13962916)
chr5 (203-253)||(16156856-16156906)
chr5 (201-270)||(17202398-17202468)
chr5 (203-268)||(19517968-19518034)
chr5 (191-253)||(19892685-19892747)
chr5 (200-250)||(32242240-32242290)
chr5 (202-270)||(35920543-35920612)
chr5 (203-248)||(38442449-38442494)
chr5 (201-271)||(6301901-6301970)
chr5 (201-268)||(21265503-21265571)
chr5 (200-271)||(24547175-24547247)
chr5 (202-254)||(28771214-28771266)
chr5 (204-248)||(37992670-37992714)
chr5 (201-252)||(16083321-16083372)
chr5 (203-268)||(11741878-11741944)
chr5 (200-254)||(42067900-42067954)
chr5 (200-253)||(13963206-13963259)
chr5 (205-250)||(27937379-27937424)
chr5 (201-271)||(6301545-6301613)
chr5 (191-251)||(14194801-14194861)
chr5 (200-248)||(28269762-28269809)
chr5 (202-254)||(30096918-30096970)
chr5 (201-250)||(11047437-11047487)
chr5 (204-254)||(16082979-16083029)
chr5 (200-234)||(27937053-27937087)
chr5 (202-271)||(38475033-38475103)
chr5 (215-271)||(5994247-5994304)
chr5 (201-254)||(24141451-24141504)
chr5 (209-270)||(24204957-24205018)
chr5 (200-232)||(21979041-21979073)
[»] chr6 (36 HSPs)
chr6 (191-271)||(33647309-33647390)
chr6 (200-271)||(30726117-30726189)
chr6 (201-271)||(3059614-3059685)
chr6 (201-271)||(33517892-33517963)
chr6 (200-271)||(681086-681158)
chr6 (200-271)||(12080994-12081066)
chr6 (200-267)||(13379844-13379912)
chr6 (200-271)||(20651008-20651080)
chr6 (200-270)||(26463177-26463248)
chr6 (197-270)||(30337444-30337518)
chr6 (200-271)||(8090285-8090357)
chr6 (205-271)||(22617886-22617954)
chr6 (201-271)||(679865-679936)
chr6 (201-270)||(21628072-21628142)
chr6 (201-254)||(8089442-8089495)
chr6 (204-268)||(11434804-11434869)
chr6 (200-271)||(12408529-12408601)
chr6 (202-254)||(26464575-26464627)
chr6 (200-267)||(30804223-30804291)
chr6 (201-252)||(17734195-17734246)
chr6 (191-250)||(30803850-30803909)
chr6 (202-271)||(12407508-12407578)
chr6 (202-271)||(15116590-15116660)
chr6 (202-271)||(30337776-30337846)
chr6 (202-270)||(30725760-30725828)
chr6 (202-254)||(15115339-15115391)
chr6 (201-271)||(11393162-11393233)
chr6 (201-271)||(20652005-20652076)
chr6 (201-271)||(21627712-21627783)
chr6 (204-250)||(12080638-12080684)
chr6 (205-270)||(33517537-33517603)
chr6 (200-255)||(28498400-28498455)
chr6 (200-255)||(29810811-29810866)
chr6 (200-246)||(3059255-3059301)
chr6 (204-252)||(8418414-8418461)
chr6 (203-270)||(17734522-17734590)
[»] chr4 (75 HSPs)
chr4 (200-271)||(51692877-51692949)
chr4 (199-254)||(148131-148186)
chr4 (201-271)||(10780712-10780783)
chr4 (201-271)||(10974321-10974392)
chr4 (201-271)||(24350790-24350861)
chr4 (202-271)||(147319-147389)
chr4 (200-271)||(10781842-10781914)
chr4 (200-271)||(24349672-24349744)
chr4 (200-271)||(35027996-35028068)
chr4 (194-254)||(55867490-55867550)
chr4 (202-268)||(18831678-18831745)
chr4 (205-271)||(54086698-54086765)
chr4 (201-271)||(1178056-1178126)
chr4 (202-271)||(7452161-7452231)
chr4 (192-254)||(50418658-50418720)
chr4 (201-254)||(46661290-46661343)
chr4 (194-254)||(7451826-7451886)
chr4 (201-253)||(14801735-14801787)
chr4 (201-268)||(17355924-17355992)
chr4 (200-271)||(24411706-24411778)
chr4 (204-271)||(44967071-44967139)
chr4 (201-271)||(1179158-1179229)
chr4 (200-270)||(13058035-13058106)
chr4 (201-271)||(13058340-13058411)
chr4 (202-271)||(23613636-23613706)
chr4 (201-270)||(24711110-24711180)
chr4 (200-254)||(24711456-24711510)
chr4 (200-254)||(50419013-50419067)
chr4 (202-252)||(55866111-55866161)
chr4 (203-271)||(15507674-15507743)
chr4 (201-254)||(23613308-23613361)
chr4 (200-253)||(39539295-39539348)
chr4 (204-271)||(16006151-16006219)
chr4 (200-271)||(34765378-34765450)
chr4 (200-252)||(34765758-34765810)
chr4 (195-270)||(44967397-44967473)
chr4 (201-253)||(48528484-48528536)
chr4 (205-271)||(11108198-11108265)
chr4 (201-271)||(11448087-11448158)
chr4 (205-271)||(37248563-37248630)
chr4 (205-271)||(43155532-43155599)
chr4 (203-254)||(49879208-49879259)
chr4 (201-271)||(53129864-53129935)
chr4 (201-255)||(5368946-5369000)
chr4 (204-270)||(15508032-15508098)
chr4 (201-270)||(18831348-18831418)
chr4 (201-270)||(40387466-40387536)
chr4 (200-270)||(50751857-50751927)
chr4 (200-250)||(51692551-51692601)
chr4 (200-250)||(54435477-54435527)
chr4 (204-268)||(17356283-17356348)
chr4 (201-254)||(35028374-35028427)
chr4 (200-268)||(36008842-36008911)
chr4 (205-268)||(37976156-37976220)
chr4 (203-270)||(52909254-52909322)
chr4 (200-271)||(52909611-52909683)
chr4 (204-270)||(37248238-37248305)
chr4 (200-270)||(41583590-41583661)
chr4 (202-271)||(5369225-5369295)
chr4 (202-267)||(14802097-14802163)
chr4 (204-254)||(24411360-24411410)
chr4 (200-250)||(37976533-37976583)
chr4 (200-254)||(41582445-41582499)
chr4 (200-254)||(43155872-43155926)
chr4 (204-250)||(53701814-53701860)
chr4 (201-267)||(53702161-53702227)
chr4 (204-254)||(54087071-54087121)
chr4 (200-249)||(35508621-35508670)
chr4 (201-252)||(32063714-32063765)
chr4 (200-254)||(36009189-36009244)
chr4 (201-271)||(53129505-53129576)
chr4 (201-235)||(54713615-54713649)
chr4 (201-254)||(40388482-40388535)
chr4 (211-270)||(50750896-50750956)
chr4 (192-232)||(53477150-53477190)
[»] chr2 (47 HSPs)
chr2 (200-271)||(44045360-44045432)
chr2 (200-270)||(25231207-25231278)
chr2 (202-271)||(25230102-25230172)
chr2 (205-271)||(6588686-6588753)
chr2 (201-271)||(37895346-37895417)
chr2 (201-269)||(36382487-36382556)
chr2 (201-254)||(36755464-36755517)
chr2 (201-253)||(3555249-3555301)
chr2 (200-271)||(39423873-39423945)
chr2 (200-271)||(39498637-39498709)
chr2 (200-270)||(11163382-11163453)
chr2 (201-271)||(16099382-16099453)
chr2 (201-271)||(44044113-44044184)
chr2 (202-271)||(6658205-6658275)
chr2 (202-271)||(10713081-10713151)
chr2 (201-270)||(15848087-15848157)
chr2 (202-271)||(30729621-30729691)
chr2 (194-254)||(6657870-6657930)
chr2 (200-252)||(15848466-15848518)
chr2 (204-271)||(36480076-36480144)
chr2 (201-268)||(45556408-45556476)
chr2 (201-252)||(2318888-2318939)
chr2 (213-271)||(13692578-13692637)
chr2 (200-254)||(34448171-34448225)
chr2 (200-254)||(36382159-36382213)
chr2 (201-270)||(45556111-45556181)
chr2 (201-254)||(34447812-34447865)
chr2 (202-253)||(9076444-9076495)
chr2 (204-255)||(10712725-10712776)
chr2 (204-254)||(36479719-36479770)
chr2 (203-253)||(2318160-2318209)
chr2 (202-271)||(11163054-11163124)
chr2 (200-254)||(28228668-28228722)
chr2 (206-271)||(44713799-44713865)
chr2 (200-254)||(44714137-44714190)
chr2 (202-254)||(6307094-6307145)
chr2 (202-254)||(16099055-16099107)
chr2 (202-253)||(3556386-3556437)
chr2 (205-252)||(37895725-37895772)
chr2 (202-253)||(39423515-39423566)
chr2 (202-271)||(21370560-21370630)
chr2 (202-270)||(22051352-22051421)
chr2 (209-254)||(39498317-39498362)
chr2 (201-254)||(43742052-43742105)
chr2 (200-232)||(24387349-24387381)
chr2 (200-232)||(24388326-24388358)
chr2 (200-252)||(39935454-39935505)
[»] scaffold0707 (1 HSPs)
scaffold0707 (201-271)||(6437-6508)
[»] chr7 (56 HSPs)
chr7 (200-270)||(20426689-20426760)
chr7 (201-271)||(24389143-24389214)
chr7 (202-271)||(42362450-42362520)
chr7 (200-271)||(5457265-5457337)
chr7 (200-271)||(45010962-45011034)
chr7 (200-271)||(48788801-48788873)
chr7 (201-271)||(2640177-2640248)
chr7 (201-271)||(6253798-6253869)
chr7 (201-271)||(10936152-10936223)
chr7 (200-270)||(17102348-17102419)
chr7 (200-270)||(27396954-27397025)
chr7 (201-255)||(28469009-28469063)
chr7 (200-254)||(28469384-28469438)
chr7 (202-271)||(40380042-40380112)
chr7 (202-271)||(43123175-43123245)
chr7 (200-253)||(29144359-29144412)
chr7 (203-271)||(42019598-42019667)
chr7 (192-271)||(27396619-27396699)
chr7 (205-271)||(27992066-27992133)
chr7 (201-271)||(32298776-32298847)
chr7 (201-270)||(17102019-17102089)
chr7 (201-255)||(34793903-34793957)
chr7 (201-254)||(6571012-6571065)
chr7 (202-270)||(10935794-10935863)
chr7 (204-268)||(24388821-24388886)
chr7 (191-271)||(28105490-28105571)
chr7 (203-271)||(34799516-34799585)
chr7 (207-271)||(40379774-40379839)
chr7 (202-255)||(42731419-42731472)
chr7 (203-270)||(6253472-6253540)
chr7 (203-270)||(32299064-32299132)
chr7 (202-271)||(13386105-13386175)
chr7 (202-271)||(18670221-18670291)
chr7 (202-271)||(33808323-33808393)
chr7 (205-270)||(37656855-37656921)
chr7 (202-271)||(37657195-37657265)
chr7 (200-250)||(42731799-42731849)
chr7 (203-271)||(1960233-1960302)
chr7 (201-254)||(19204488-19204541)
chr7 (201-254)||(22871653-22871706)
chr7 (201-250)||(29141556-29141605)
chr7 (200-271)||(17886848-17886920)
chr7 (200-252)||(20425476-20425528)
chr7 (203-254)||(23181370-23181421)
chr7 (205-252)||(42019975-42020022)
chr7 (201-270)||(27991738-27991808)
chr7 (201-250)||(30127440-30127489)
chr7 (201-254)||(32053142-32053195)
chr7 (192-232)||(12930762-12930802)
chr7 (201-271)||(47945356-47945427)
chr7 (201-271)||(47950786-47950857)
chr7 (200-254)||(18086287-18086341)
chr7 (192-229)||(12929277-12929314)
chr7 (207-268)||(42363747-42363808)
chr7 (211-270)||(32934357-32934417)
chr7 (200-232)||(38643548-38643580)
[»] scaffold0031 (2 HSPs)
scaffold0031 (202-271)||(69323-69393)
scaffold0031 (202-254)||(68965-69017)
[»] chr3 (51 HSPs)
chr3 (202-271)||(3850485-3850555)
chr3 (201-267)||(33689381-33689447)
chr3 (202-271)||(36418046-36418116)
chr3 (195-252)||(40033834-40033891)
chr3 (202-270)||(40758147-40758216)
chr3 (202-254)||(9294334-9294386)
chr3 (200-271)||(9367739-9367811)
chr3 (200-271)||(23458337-23458409)
chr3 (200-271)||(40758468-40758540)
chr3 (201-271)||(3849030-3849101)
chr3 (205-255)||(36150530-36150580)
chr3 (206-271)||(41558240-41558306)
chr3 (200-254)||(42342789-42342843)
chr3 (205-271)||(46475139-46475205)
chr3 (201-254)||(19741268-19741321)
chr3 (203-271)||(35712045-35712114)
chr3 (203-271)||(53757081-53757150)
chr3 (198-254)||(1079597-1079653)
chr3 (195-270)||(2796172-2796248)
chr3 (200-252)||(33689757-33689809)
chr3 (202-254)||(34142594-34142646)
chr3 (200-271)||(41558006-41558078)
chr3 (200-271)||(51993962-51994034)
chr3 (201-267)||(2796459-2796526)
chr3 (201-271)||(53856415-53856486)
chr3 (200-270)||(4322590-4322660)
chr3 (202-267)||(53856015-53856081)
chr3 (204-253)||(9292245-9292294)
chr3 (211-271)||(23457988-23458049)
chr3 (200-271)||(19740921-19740993)
chr3 (201-253)||(25107212-25107264)
chr3 (201-253)||(26463963-26464015)
chr3 (205-253)||(46474818-46474866)
chr3 (203-255)||(51994261-51994313)
chr3 (203-254)||(23276359-23276410)
chr3 (205-271)||(26463635-26463702)
chr3 (205-271)||(36417691-36417758)
chr3 (200-255)||(47856385-47856440)
chr3 (208-254)||(9368677-9368723)
chr3 (204-249)||(43384664-43384709)
chr3 (205-250)||(53756747-53756792)
chr3 (205-268)||(42343092-42343156)
chr3 (202-250)||(47857625-47857673)
chr3 (199-254)||(1078534-1078589)
chr3 (203-254)||(25108471-25108522)
chr3 (208-270)||(32431551-32431614)
chr3 (205-271)||(55052295-55052362)
chr3 (211-270)||(4323561-4323621)
chr3 (205-271)||(21783403-21783468)
chr3 (200-252)||(23272822-23272874)
chr3 (202-254)||(33154877-33154929)
[»] scaffold0775 (1 HSPs)
scaffold0775 (200-271)||(4960-5032)
[»] scaffold0005 (2 HSPs)
scaffold0005 (201-253)||(37940-37992)
scaffold0005 (202-267)||(37564-37630)
[»] scaffold0007 (2 HSPs)
scaffold0007 (201-254)||(2117-2170)
scaffold0007 (200-254)||(1767-1821)
[»] scaffold0075 (2 HSPs)
scaffold0075 (202-253)||(14767-14818)
scaffold0075 (200-249)||(14427-14476)
[»] scaffold0020 (2 HSPs)
scaffold0020 (200-270)||(139670-139741)
scaffold0020 (205-254)||(140017-140066)
[»] scaffold0128 (1 HSPs)
scaffold0128 (205-254)||(19860-19909)
[»] scaffold0295 (1 HSPs)
scaffold0295 (201-253)||(2506-2558)
[»] scaffold0220 (1 HSPs)
scaffold0220 (201-255)||(24721-24775)
[»] scaffold0009 (1 HSPs)
scaffold0009 (200-232)||(260999-261031)


Alignment Details
Target: chr8 (Bit Score: 125; Significance: 2e-64; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 53 - 197
Target Start/End: Original strand, 40683225 - 40683369
Alignment:
Q  53 ttgtacaagttcaaattatataatctgaattttatcaagttatcaactgtacttggtcttaaacttggtatgtgggggtttaacaccttttggagcatat 152  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40683225 ttgtacaagttcaaattatataatctgaattgtatcaagttatgaactgtacttggtcttaaacttggtatgtgggggtttaacaccttttggagcatat 40683324  T
Q  153 gatgcgaactgatattagcttgtttcgaattttatttgaataaaa 197  Q
     || ||| |||||||||||||||||||||||||||||||||||||    
T  40683325 aatccgagctgatattagcttgtttcgaattttatttgaataaaa 40683369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 4995085 - 4995016
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcctgcattcgctaatcct 270  Q
    ||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||| | |||||||||||    
T  4995085 aggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtcctgtaatcgctaatcct 4995016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 33357496 - 33357568
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||| ||| || ||||||||||||||    
T  33357496 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccatgtattcgctaatcctt 33357568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 196 - 271
Target Start/End: Complemental strand, 38862997 - 38862921
Alignment:
Q  196 aatgtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    |||| ||| ||||||||||||||||||| |||||||||| |||||||||||||||||| ||| ||||||||||||||    
T  38862997 aatgaaggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatcctt 38862921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 20386859 - 20386788
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  20386859 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcctt 20386788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 271
Target Start/End: Original strand, 20385568 - 20385638
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  20385568 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcctt 20385638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 271
Target Start/End: Complemental strand, 38956100 - 38956030
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  38956100 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcctt 38956030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 268
Target Start/End: Original strand, 16388581 - 16388650
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattgg-tcctgcattcgctaatc 268  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||  |||||||||||    
T  16388581 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcctatattcgctaatc 16388650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 271
Target Start/End: Complemental strand, 34685685 - 34685616
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcctgcattcgctaatcctt 271  Q
    ||||||||||||||||| |||| ||||||||||  ||||||||||||||||| || ||||||||||||||    
T  34685685 ggcttaaatatgtattttatccttgcaattagggatcgtttaaaaattggtcttgtattcgctaatcctt 34685616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 39071676 - 39071745
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||| |||| | |||||||||||    
T  39071676 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 39071745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 7313435 - 7313363
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    ||||||||||||||||||| |||||||||| |||| ||||||||||||||||||| |||| || |||||||||    
T  7313435 taggcttaaatatgtatttgatccctgcaaataggggtcgtttaaaaattggtccttgcaatcactaatcctt 7313363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 13186489 - 13186417
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattgg-tcctgcattcgctaatcctt 271  Q
    ||||||||||||| |||||||||| |||||||||| |||||||||||||||| || || ||||||||||||||    
T  13186489 taggcttaaatatatatttcatccttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatcctt 13186417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 23663543 - 23663615
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||| ||||||||| |||||||||| ||||||||||||||||| |||| ||||| ||||||||    
T  23663543 taggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgttaatcctt 23663615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 40317966 - 40318034
Alignment:
Q  204 cttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    |||||||||||||||||||| |||||||||| |||||||||||||| ||| ||| ||||||||||||||    
T  40317966 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatttgtctctgtattcgctaatcctt 40318034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 8316652 - 8316723
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||||||||||||| || ||||| ||||||||    
T  8316652 aggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatcctt 8316723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 23663944 - 23663873
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcct 270  Q
    ||||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||| | |||||||||||    
T  23663944 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcct 23663873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 7306398 - 7306452
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcct 255  Q
    |||||||||||||||||| |||||||||| |||| ||||||||||||||||||||    
T  7306398 aggcttaaatatgtatttgatccctgcaaataggggtcgtttaaaaattggtcct 7306452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 8317017 - 8316963
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcct 255  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||||||||||||    
T  8317017 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtcct 8316963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 254
Target Start/End: Original strand, 12198948 - 12199002
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  12198948 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtcc 12199002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 254
Target Start/End: Original strand, 12443376 - 12443430
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  12443376 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtcc 12443430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 271
Target Start/End: Complemental strand, 31608941 - 31608871
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    |||||||||| ||||||||||| |||||||| | ||||||||||||||||||| || ||||||||||||||    
T  31608941 ggcttaaataagtatttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatcctt 31608871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 1425051 - 1425123
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||| |||||||||||||| |||| |||||||||| ||||||||||||||||| |||| |||| |||||||||    
T  1425051 taggtttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcactaatcctt 1425123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 203 - 271
Target Start/End: Complemental strand, 30712143 - 30712075
Alignment:
Q  203 gcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcctgcattcgctaatcctt 271  Q
    |||||||||||||||| |||| ||| |||||| | ||||||||||||||||||| ||| ||||||||||    
T  30712143 gcttaaatatgtatttgatccttgcgattaggggccgtttaaaaattggtcctgtatttgctaatcctt 30712075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 203 - 271
Target Start/End: Complemental strand, 30719920 - 30719852
Alignment:
Q  203 gcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcctgcattcgctaatcctt 271  Q
    |||||||||||||||| |||| ||| |||||| | ||||||||||||||||||| ||| ||||||||||    
T  30719920 gcttaaatatgtatttgatccttgcgattaggggccgtttaaaaattggtcctgtatttgctaatcctt 30719852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 34060487 - 34060559
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||||||||| || | ||||||||||||    
T  34060487 taggcttaaatatgtatttcatccttgcaattaaacgtcgtttaaaaattggtccatgtaatcgctaatcctt 34060559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 34177396 - 34177328
Alignment:
Q  204 cttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    |||||||||||||||||||  || ||||||| ||||||||||||||||||| || ||||||||||||||    
T  34177396 cttaaatatgtatttcatctttgtaattaggggtcgtttaaaaattggtccttgtattcgctaatcctt 34177328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 42803646 - 42803594
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  42803646 ggcttaaatatgtatttcatccttgcaattagaagtcgtttaaaaattggtcc 42803594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 252
Target Start/End: Original strand, 13186059 - 13186110
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt 252  Q
    ||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  13186059 aggcttaaatatgtatttcatccttgcaattagggatcgtttaaaaattggt 13186110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 23698674 - 23698603
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    ||||||||||||||||||| |||| || ||||||| ||||||||||||||||| |||| | |||||||||||    
T  23698674 taggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 23698603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 34061757 - 34061686
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    ||||||||||||||||| ||||| |||||||||  ||||||||||||||| ||| || ||||||||||||||    
T  34061757 aggcttaaatatgtattgcatccttgcaattagacgtcgtttaaaaattgatccatgtattcgctaatcctt 34061686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 12273283 - 12273229
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||| |||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  12273283 taggtttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtcc 12273229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 252
Target Start/End: Complemental strand, 16388954 - 16388904
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt 252  Q
    |||||||||||||||||||||| |||||||||| ||| |||||||||||||    
T  16388954 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggt 16388904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 31608526 - 31608596
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcctgcattcgctaatcctt 271  Q
    ||||||||| ||||||||||||| || |||||||  |||||||||||||| || || ||||||||||||||    
T  31608526 aggcttaaacatgtatttcatccttgtaattagggatcgtttaaaaattgatcatgtattcgctaatcctt 31608596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 39072071 - 39072017
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||||||||||||||||| |||||| | | |||||||||||||||||||    
T  39072071 taggcttaaatatgtatttcatccttgcaatcaagggtcgtttaaaaattggtcc 39072017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 40318393 - 40318323
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcct 270  Q
    ||||||||||||||||||||||| |||||||||| || ||||||||||| |||| || | |||||||||||    
T  40318393 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattagtccatgtaatcgctaatcct 40318323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 2535978 - 2535926
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||| |||||||||||| |||||||||||||| ||| |||||||||||||||    
T  2535978 ggctttaatatgtatttcgtccctgcaattaggggtcatttaaaaattggtcc 2535926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 4406088 - 4406036
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||||||||||||||| || ||||||| || ||||||||||||||||    
T  4406088 ggcttaaatatgtatttcatccttgtaattaggggttgtttaaaaattggtcc 4406036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 4994655 - 4994727
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    |||||||||||||||||||||||  ||||||||||  | |||||||||||| || ||| ||||||||||||||    
T  4994655 taggcttaaatatgtatttcatcgttgcaattagggattgtttaaaaattgatctctgtattcgctaatcctt 4994727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 12272920 - 12272988
Alignment:
Q  204 cttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    ||||||||||||||| |||| ||||||||||  ||||||||||||||||| ||| | ||||||||||||    
T  12272920 cttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtctctgtaatcgctaatcctt 12272988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 36928905 - 36928853
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc 253  Q
    ||||||||||||||||||||||  ||||||||| | |||||||||||||||||    
T  36928905 aggcttaaatatgtatttcatcgttgcaattagatatcgtttaaaaattggtc 36928853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 249
Target Start/End: Original strand, 30459371 - 30459418
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaatt 249  Q
    |||||||||||||||||||||| | |||||||| ||||||||||||||    
T  30459371 ggcttaaatatgtatttcatccttacaattaggcgtcgtttaaaaatt 30459418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 252
Target Start/End: Original strand, 2534695 - 2534745
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt 252  Q
    ||||||||||||||||||  ||||||||||| | |||||||||||||||||    
T  2534695 ggcttaaatatgtatttcgaccctgcaattatgggtcgtttaaaaattggt 2534745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 9065667 - 9065717
Alignment:
Q  204 cttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||||||||||||  || ||||||| |||||||||||||||||||    
T  9065667 cttaaatatgtatttcatctttgtaattaggggtcgtttaaaaattggtcc 9065717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 34176437 - 34176494
Alignment:
Q  194 aaaatgtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt 252  Q
    |||| ||||| ||||||||||||||||||| |||||||| | |||||||||||||||||    
T  34176437 aaaaagtaggtttaaatatgtatttcatccttgcaattatg-gtcgtttaaaaattggt 34176494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 35756577 - 35756634
Alignment:
Q  195 aaatgtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc 253  Q
    |||| |||||||||||||||||||||| | |||||||||| ||| ||||||||||||||    
T  35756577 aaatttaggcttaaatatgtatttcat-catgcaattaggggtcatttaaaaattggtc 35756634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 36186494 - 36186448
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaa 246  Q
    |||||||||||||||||||||||| |||||||| | |||||||||||    
T  36186494 taggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaa 36186448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 7294091 - 7294171
Alignment:
Q  191 aataaaatgtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    |||||||| || ||||||||||||||||||| | |||||||||  ||||||||||||||| || ||  ||||||||||||||    
T  7294091 aataaaatctaagcttaaatatgtatttcat-cttgcaattagaggtcgtttaaaaattgatctctatattcgctaatcctt 7294171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 22915787 - 22915734
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||||||||||| |||| ||||| ||||  ||||||||||||||||||    
T  22915787 aggcttaaatatgtatttgatccttgcaactagggatcgtttaaaaattggtcc 22915734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 7295357 - 7295285
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||| |||||||||||||| |||| |||||||| |  |||||||||||| ||| |||| ||||||||||||||    
T  7295357 taggtttaaatatgtattttatccttgcaattatggatcgtttaaaaatcggtccctgtattcgctaatcctt 7295285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 12199332 - 12199264
Alignment:
Q  204 cttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    ||||||||||||||| |||| |  ||||||| ||||||||||||||||||| || | ||||||||||||    
T  12199332 cttaaatatgtatttgatccttataattaggagtcgtttaaaaattggtccttgtaatcgctaatcctt 12199264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 12443760 - 12443692
Alignment:
Q  204 cttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    ||||||||||||||| |||| |  ||||||| ||||||||||||||||||| || | ||||||||||||    
T  12443760 cttaaatatgtatttgatccttataattaggagtcgtttaaaaattggtccttgtaatcgctaatcctt 12443692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 1425448 - 1425381
Alignment:
Q  203 gcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcctgcattcgctaatcct 270  Q
    |||||||||| ||||| |||| || ||||||  ||||||||||||||||||||| | || ||||||||    
T  1425448 gcttaaatatatatttgatccttgtaattagaggtcgtttaaaaattggtcctgtaatcactaatcct 1425381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 253
Target Start/End: Original strand, 38955703 - 38955754
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc 253  Q
    ||||||||||||||||| |||| ||||||| ||  |||||||||||||||||    
T  38955703 ggcttaaatatgtatttgatccttgcaattggggatcgtttaaaaattggtc 38955754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 271
Target Start/End: Original strand, 5960046 - 5960116
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||| ||||||||||||| ||||||||||  ||| |||||||||| | |||| | ||||||||||||    
T  5960046 ggcttaaacatgtatttcatccttgcaattagggatcgattaaaaattgctccctgtaatcgctaatcctt 5960116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 9065799 - 9065745
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcct 255  Q
    ||||||||||||||||| ||||| |||||||||| ||  ||||||||||| ||||    
T  9065799 aggcttaaatatgtattccatccttgcaattaggggttatttaaaaattgatcct 9065745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 271
Target Start/End: Original strand, 36186105 - 36186171
Alignment:
Q  206 taaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||||||  || ||||||| ||| ||||||| ||||| |||| ||||||||||||||    
T  36186105 taaatatgtatttcatctttgtaattaggggtcttttaaaatttggtccctgtattcgctaatcctt 36186171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 23698308 - 23698361
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaatta-ggtgtcgtttaaaaattggtcc 254  Q
    ||||||||||||||||| |||| |||||||| || |||||||||||||| ||||    
T  23698308 ggcttaaatatgtatttgatccttgcaattagggggtcgtttaaaaattagtcc 23698361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 246
Target Start/End: Original strand, 38862618 - 38862662
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaa 246  Q
    |||||||||||||||||||||| |||||||| | | |||||||||    
T  38862618 ggcttaaatatgtatttcatccttgcaattaagggccgtttaaaa 38862662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 40683143 - 40683179
Alignment:
Q  5 tgtcgaagaatatgtgttaacttataaacacaaactt 41  Q
    |||| ||||| ||||||||||||||||||||||||||    
T  40683143 tgtccaagaaaatgtgttaacttataaacacaaactt 40683179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 5e-25; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 17661851 - 17661921
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcctgcattcgctaatcctt 271  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||    
T  17661851 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcctgtattcgctaatcctt 17661921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 43759261 - 43759180
Alignment:
Q  191 aataaaatgtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||| ||| |||| ||||||||||||||    
T  43759261 aataaaatttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgtattcgctaatcctt 43759180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 30711757 - 30711685
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||| ||||||||||||||    
T  30711757 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatcctt 30711685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 36694280 - 36694352
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||  || ||||||||||||||    
T  36694280 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctatgtattcgctaatcctt 36694352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 36710381 - 36710453
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||  || ||||||||||||||    
T  36710381 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctatgtattcgctaatcctt 36710453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 37578190 - 37578262
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||| ||||||||||||||||||| |||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  37578190 taggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcctt 37578262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 5734008 - 5734079
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcctgcattcgctaatcctt 271  Q
    |||||||||||||||||||| ||| |||||||||| |||||||||||||||||| || | ||||||||||||    
T  5734008 taggcttaaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtcatgtaatcgctaatcctt 5734079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 5735140 - 5735069
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattgg-tcctgcattcgctaatcctt 271  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||| || || ||||||||||||||    
T  5735140 aggcttaaatatgtatttcatccctgcaattaggaatcgtttaaaaattggttcatgtattcgctaatcctt 5735069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 6367991 - 6367920
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||||||||||||| |||||||| | ||||||||||||||||| |||| ||||||||||||||    
T  6367991 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatcctt 6367920  T

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Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 23209757 - 23209702
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcct 255  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  23209757 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcct 23209702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 36694678 - 36694607
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcct 270  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||| | |||||||||||    
T  36694678 taggcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggtctctgtaatcgctaatcct 36694607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 36710779 - 36710708
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcct 270  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||| | |||||||||||    
T  36710779 taggcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggtctctgtaatcgctaatcct 36710708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 271
Target Start/End: Original strand, 24009575 - 24009645
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||| || |||| |||||||||    
T  24009575 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtattcactaatcctt 24009645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 271
Target Start/End: Complemental strand, 34850493 - 34850423
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  34850493 ggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcctt 34850423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 197 - 270
Target Start/End: Original strand, 41098728 - 41098802
Alignment:
Q  197 atgtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcct 270  Q
    ||||||||||||||||||||||||| | |||||||||| |||||||||||||||||| ||| | |||||||||||    
T  41098728 atgtaggcttaaatatgtatttcattcttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcct 41098802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 267
Target Start/End: Original strand, 46899061 - 46899127
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaat 267  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||| || ||||||||||    
T  46899061 ggcttaaatatgtatttcatccatgcaattaggggtcgtttaaaaattggtccatgtattcgctaat 46899127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 6367562 - 6367631
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||| |||| | |||||||||||    
T  6367562 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 6367631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 19515817 - 19515870
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc 253  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  19515817 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 19515870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 271
Target Start/End: Complemental strand, 35152757 - 35152688
Alignment:
Q  203 gcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||| ||| ||| ||||||||||||||    
T  35152757 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattagtctctgtattcgctaatcctt 35152688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 13914066 - 13914138
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    ||||||||||| |||||||||||| |||||||||| |||||||||||||| |||| || ||||||||||||||    
T  13914066 taggcttaaatgtgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgtattcgctaatcctt 13914138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 34464449 - 34464501
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  34464449 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcc 34464501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 34464885 - 34464825
Alignment:
Q  194 aaaatgtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||| |||||||||||||||||||||||| |||||||||| || ||||||||||||||||    
T  34464885 aaaatttaggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggtcc 34464825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 35473629 - 35473700
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    ||||||||||||||||||| |||| |||||||||| ||||||||||||||||| |||| | |||||||||||    
T  35473629 taggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 35473700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 40772888 - 40772817
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||||||||||||| |||||||||| ||||||| ||||| ||| |||| ||||||||||||||    
T  40772888 aggcttaaatatgtatttcatccttgcaattaggggtcgtttgaaaatcggtccctgtattcgctaatcctt 40772817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 209 - 271
Target Start/End: Complemental strand, 49723147 - 49723084
Alignment:
Q  209 atatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||| || ||||||||||||||    
T  49723147 atatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcctt 49723084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 271
Target Start/End: Original strand, 183221 - 183291
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||||||| |||| | |||||||| ||||||||||||||||| |||| ||||||||||||||    
T  183221 ggcttaaatatgtatttgatccttacaattaggggtcgtttaaaaattggtccctgtattcgctaatcctt 183291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 271
Target Start/End: Complemental strand, 26024820 - 26024750
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||||| |||| | ||||||||||||    
T  26024820 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctt 26024750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 271
Target Start/End: Original strand, 34849011 - 34849081
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||||||| |||| |||||||||| ||| ||||||||||||| |||| ||||||||||||||    
T  34849011 ggcttaaatatgtatttaatccttgcaattaggggtcttttaaaaattggtccctgtattcgctaatcctt 34849081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 254
Target Start/End: Original strand, 35152341 - 35152395
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  35152341 taggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcc 35152395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 271
Target Start/End: Original strand, 47999123 - 47999193
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||||||| |||| ||||||||||  |||||||||||||||| |||| ||||||||||||||    
T  47999123 ggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccctgtattcgctaatcctt 47999193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 203 - 271
Target Start/End: Complemental strand, 13300331 - 13300262
Alignment:
Q  203 gcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    ||||||||||||||||||||  |||||||||| |||||||||||||||||| ||| |||| |||||||||    
T  13300331 gcttaaatatgtatttcatcattgcaattaggcgtcgtttaaaaattggtctctgtattcactaatcctt 13300262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 25647883 - 25647936
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  25647883 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtcc 25647936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 31197065 - 31197134
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcct 270  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||| ||| ||| ||||| |||||||    
T  31197065 ggcttaaatatgtatttcatccctgcaattaggggtcatttaaaaatttgtctctgtattcgttaatcct 31197134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 37578631 - 37578570
Alignment:
Q  191 aataaaatgtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt 252  Q
    ||||||| | ||||||||||||||||||||||| ||||||| || |||||||||||||||||    
T  37578631 aataaaaagaaggcttaaatatgtatttcatccttgcaattgggggtcgtttaaaaattggt 37578570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 40772507 - 40772576
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    |||||||||||||||||||||| |||||||| | ||||||||||||||||| |||| | |||||||||||    
T  40772507 ggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtccctgtaatcgctaatcct 40772576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 253
Target Start/End: Original strand, 40435348 - 40435396
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc 253  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  40435348 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 40435396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 42533022 - 42533094
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    |||| ||||||||||||||||||| |||||||||| |||||||||||||| |||| || ||||| ||||||||    
T  42533022 taggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgtattcgttaatcctt 42533094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 51015631 - 51015703
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    |||||||||||||||| || |||||||||| |||| ||||||||||||||||||| |||| || |||||||||    
T  51015631 taggcttaaatatgtaattgatccctgcaaataggggtcgtttaaaaattggtccttgcaatcactaatcctt 51015703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 1103890 - 1103819
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||| |||||||||| ||||||||   ||||||||||||||||| |||| ||||||||||||||    
T  1103890 aggcttaaatatatatttcatccttgcaattaaaggtcgtttaaaaattggtccctgtattcgctaatcctt 1103819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 252
Target Start/End: Complemental strand, 17662279 - 17662228
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt 252  Q
    ||||||||||||||||||||||| ||||||| || |||||||||||||||||    
T  17662279 aggcttaaatatgtatttcatccttgcaatttggggtcgtttaaaaattggt 17662228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 19017628 - 19017699
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattg-gtcctgcattcgctaatcctt 271  Q
    ||||||||||||||||||||||| |||||||||| || ||||||||||||  | ||| ||||||||||||||    
T  19017628 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattgatttctgtattcgctaatcctt 19017699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 19018059 - 19017988
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcct 270  Q
    ||||||||||||||||||| |||| ||||||||   ||||||||||||||||||| || |||||||||||||    
T  19018059 taggcttaaatatgtattttatccttgcaattacaggtcgtttaaaaattggtccatgtattcgctaatcct 19017988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 48779548 - 48779477
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    ||||||||||||||||||||||| |||||||||| |||| ||||||||| |||| || ||| ||||||||||    
T  48779548 aggcttaaatatgtatttcatccttgcaattaggagtcgcttaaaaattagtccatgtatttgctaatcctt 48779477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 7821382 - 7821312
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcctgcattcgctaatcctt 271  Q
    ||||||||||||| ||||||||  ||||||||   |||||||||||||||||| || ||||||||||||||    
T  7821382 aggcttaaatatgcatttcatcattgcaattaaaggtcgtttaaaaattggtcatgtattcgctaatcctt 7821312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 26024422 - 26024492
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcct 270  Q
    |||||||||||||||||| || | |||||||||| |||||||||||||||||| ||| | |||||||||||    
T  26024422 aggcttaaatatgtatttgattcttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcct 26024492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 271
Target Start/End: Complemental strand, 32917688 - 32917618
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    |||||||||||||||||||| | |||||||| | |||||||||||||||||| ||| ||||| ||||||||    
T  32917688 ggcttaaatatgtatttcattcttgcaattaagggtcgtttaaaaattggtctctgtattcgttaatcctt 32917618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 271
Target Start/End: Complemental strand, 41099157 - 41099091
Alignment:
Q  206 taaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    |||||||||||||||||| | |||||||  |||||||||||||||||| ||| ||||||||||||||    
T  41099157 taaatatgtatttcatccttacaattagtggtcgtttaaaaattggtctctgtattcgctaatcctt 41099091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 47999522 - 47999468
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||||||||||||||| |||| || ||||||| |||||||||||||||||||    
T  47999522 taggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtcc 47999468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 51019778 - 51019724
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcct 255  Q
    ||||||||||||||| || |||||||||| |||| ||||||||||||||||||||    
T  51019778 aggcttaaatatgtaattgatccctgcaaataggggtcgtttaaaaattggtcct 51019724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 271
Target Start/End: Original strand, 4960541 - 4960610
Alignment:
Q  203 gcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||||| ||  || ||||||||||||||    
T  4960541 gcttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattgctctttgtattcgctaatcctt 4960610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 17692610 - 17692561
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||||||||||||||| |||||||||| ||||||||||||| |||||    
T  17692610 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtcc 17692561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 42248475 - 42248524
Alignment:
Q  204 cttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc 253  Q
    |||||||||||||||||||| |||||||||  ||||||||||||||||||    
T  42248475 cttaaatatgtatttcatccttgcaattagtggtcgtttaaaaattggtc 42248524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 1841888 - 1841816
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||| ||||||||||||||||||| || ||| ||| ||||||||||||||| | |||| ||||||||||||||    
T  1841888 taggtttaaatatgtatttcatccttgtaatgaggggtcgtttaaaaattgttccctgtattcgctaatcctt 1841816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 13914494 - 13914426
Alignment:
Q  203 gcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcct 270  Q
    ||||||||||||||||||||| |||||||||  || |||||||||||||||| || | |||||||||||    
T  13914494 gcttaaatatgtatttcatccttgcaattagaggttgtttaaaaattggtccatgtaatcgctaatcct 13914426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 30711327 - 30711375
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattg 250  Q
    |||||||||||||||||||||| |||||||||| || ||||||||||||    
T  30711327 ggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattg 30711375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 40439615 - 40439547
Alignment:
Q  204 cttaaatatgtatttcatccctgcaatt-aggtgtcgtttaaaaattggtcctgcattcgctaatcctt 271  Q
    |||||||||||||||||||| ||||||| | | ||||||||||||||| || || ||||||||||||||    
T  40439615 cttaaatatgtatttcatccttgcaattaatgggtcgtttaaaaattgatcatgtattcgctaatcctt 40439547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 46900029 - 46899977
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc 253  Q
    ||||||||||||||||||||||| |||||||| | ||| ||||||||||||||    
T  46900029 aggcttaaatatgtatttcatccatgcaattaagggtcatttaaaaattggtc 46899977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 249
Target Start/End: Complemental strand, 6518224 - 6518177
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaatt 249  Q
    ||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  6518224 ggcttaaatatatatttcatccttgcaattaggggtcgtttaaaaatt 6518177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 7820953 - 7821024
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||||||||||||| |||||||||| ||| ||||| |||| || |||| | ||||||||||||    
T  7820953 aggcttaaatatgtatttcatccttgcaattaggggtcctttaataattagtccctgtaatcgctaatcctt 7821024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 40210373 - 40210440
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    ||||||||||||||||||| |||||||||  ||||||||||| ||||||  || ||||||||||||||    
T  40210373 ttaaatatgtatttcatccttgcaattagtggtcgtttaaaatttggtctttgtattcgctaatcctt 40210440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 271
Target Start/End: Complemental strand, 14879386 - 14879316
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    ||||||||||| |||||||||  ||||||||||  ||||||||||||||||| ||  ||||||||||||||    
T  14879386 ggcttaaatatatatttcatcattgcaattagggatcgtttaaaaattggtctctatattcgctaatcctt 14879316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 270
Target Start/End: Original strand, 46163033 - 46163099
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcct 270  Q
    ||||||||||||||||||  || ||||||| ||||||||||||||||||| || | |||||||||||    
T  46163033 ttaaatatgtatttcatcattgtaattaggggtcgtttaaaaattggtccatgtaatcgctaatcct 46163099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 7231678 - 7231629
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattg 250  Q
    |||||||||||||||||| |||| || ||||||| |||||||||||||||    
T  7231678 aggcttaaatatgtattttatccttgtaattaggagtcgtttaaaaattg 7231629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 19322881 - 19322962
Alignment:
Q  191 aataaaatgtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaatt-ggtcctgcattcgctaatcctt 271  Q
    |||| ||| |||||||||||||||||||||||| |  ||||| | |||||||||||||| | || || ||||||||||||||    
T  19322881 aatataatataggcttaaatatgtatttcatccttataattacgggtcgtttaaaaattcgttcatgtattcgctaatcctt 19322962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 40210796 - 40210747
Alignment:
Q  204 cttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc 253  Q
    |||||||||||||||||||  |||||||||| | ||||||||||||||||    
T  40210796 cttaaatatgtatttcatcattgcaattaggggccgtttaaaaattggtc 40210747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 183622 - 183550
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaatta-ggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    ||||||||||||||||||| |||| || ||||| || ||||||||||||||||| |||| | |||||||||||    
T  183622 taggcttaaatatgtatttgatccttgtaattagggggtcgtttaaaaattggtccctgtaatcgctaatcct 183550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 23209365 - 23209408
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaatt 249  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||    
T  23209365 ttaaatatgtatttcatccttgcaattagg-gtcgtttaaaaatt 23209408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 253
Target Start/End: Complemental strand, 24009966 - 24009918
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc 253  Q
    |||||| |||||||||||| ||||||||||  |||||||||||||||||    
T  24009966 ttaaatttgtatttcatccttgcaattagggatcgtttaaaaattggtc 24009918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 26234478 - 26234430
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattg 250  Q
    ||||||||||||||||| |||||||||| |||| |||| ||||||||||    
T  26234478 ggcttaaatatgtatttgatccctgcaaataggggtcgcttaaaaattg 26234430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 17691218 - 17691289
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||| |||||||||||| ||| | ||| |||| ||||||||||||||||| |||| | ||||||||||||    
T  17691218 aggctttaatatgtatttcgtccttacaagtaggggtcgtttaaaaattggtccctgtaatcgctaatcctt 17691289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 30322795 - 30322761
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattagg 234  Q
    |||| ||||||||||||||||||||||||||||||    
T  30322795 taggtttaaatatgtatttcatccctgcaattagg 30322761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 1841457 - 1841510
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc 253  Q
    |||||||||| |||||||||||   |||||||| | ||||||||||||||||||    
T  1841457 taggcttaaacatgtatttcatatttgcaattaagagtcgtttaaaaattggtc 1841510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 252
Target Start/End: Original strand, 14878980 - 14879021
Alignment:
Q  211 atgtatttcatccctgcaattaggtgtcgtttaaaaattggt 252  Q
    |||||||| |||| |||||||||| |||||||||||||||||    
T  14878980 atgtattttatccttgcaattaggggtcgtttaaaaattggt 14879021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 249
Target Start/End: Complemental strand, 42534445 - 42534397
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaatt 249  Q
    |||| |||||||||||||||||| || |||||||| ||||||||||||||    
T  42534445 taggtttaaatatgtatttcatctctacaattagg-gtcgtttaaaaatt 42534397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 26234203 - 26234251
Alignment:
Q  223 cctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcct 270  Q
    ||||||| |||| ||||||||||||||||||| ||||||| ||||||||    
T  26234203 cctgcaaataggggtcgtttaaaaattggtccttgcattcactaatcct 26234251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 72)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 42265734 - 42265805
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  42265734 aggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcctt 42265805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 14194412 - 14194493
Alignment:
Q  191 aataaaatgtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||| ||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  14194412 aatataatttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcctt 14194493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 32242670 - 32242600
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcctgcattcgctaatcctt 271  Q
    ||||||||||||||||||||||| |||||||||| || ||||||||||| |||||| ||||||||||||||    
T  32242670 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattagtcctgtattcgctaatcctt 32242600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 28770867 - 28770939
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||||||||| |||| |||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  28770867 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcctt 28770939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 191 - 254
Target Start/End: Original strand, 5993879 - 5993941
Alignment:
Q  191 aataaaatgtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  5993879 aataaaat-taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcc 5993941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 11762146 - 11762075
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  11762146 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcctt 11762075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 18247505 - 18247434
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||| |||||| ||| ||||||||||||||    
T  18247505 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaatttggtctctgtattcgctaatcctt 18247434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 20814134 - 20814205
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcctgcattcgctaatcctt 271  Q
    |||||||||||||||||||||||| | |||||||  |||||||||||||||||| || ||||||||||||||    
T  20814134 taggcttaaatatgtatttcatccttacaattagaggtcgtttaaaaattggtcttgtattcgctaatcctt 20814205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 20814565 - 20814494
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcct 270  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||| | |||||||||||    
T  20814565 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcactgtaatcgctaatcct 20814494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 271
Target Start/End: Complemental strand, 21257586 - 21257519
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| | ||| ||||||||||||||    
T  21257586 ttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggacactgtattcgctaatcctt 21257519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 271
Target Start/End: Complemental strand, 17202827 - 17202757
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||| ||| |||| ||||||||||||||    
T  17202827 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgtattcgctaatcctt 17202757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 271
Target Start/End: Complemental strand, 27587543 - 27587473
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||||||| || ||||||||||||||    
T  27587543 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtattcgctaatcctt 27587473  T

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Target: chr5; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 28269418 - 28269492
Alignment:
Q  198 tgtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||||||||||||||  |||||||||| ||||||||||||||||| || | ||||||||||||||    
T  28269418 tgtaggcttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattggtcccagtattcgctaatcctt 28269492  T

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Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 6150443 - 6150504
Alignment:
Q  191 aataaaatgtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt 252  Q
    ||||||||  ||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  6150443 aataaaataaaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 6150504  T

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Target: chr5; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 16157284 - 16157231
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  16157284 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcc 16157231  T

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Target: chr5; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 35512553 - 35512472
Alignment:
Q  191 aataaaatgtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||  ||| |||||||||||||||||||| |||||||||| ||||||||||||||||| |||| |||||| |||||||    
T  35512553 aataaaaactagacttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgccaatcctt 35512472  T

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Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 19892310 - 19892378
Alignment:
Q  204 cttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||| || ||||| ||||||||    
T  19892310 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatcctt 19892378  T

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Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 20840531 - 20840583
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt 252  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  20840531 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 20840583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 37991197 - 37991269
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||| | |||||||||||||||||| ||||||||||||||||| |||| ||||| ||||||||    
T  37991197 taggcttaaatatgaaattcatccctgcaattaggggtcgtttaaaaattggtccctgtattcgttaatcctt 37991269  T

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Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 268
Target Start/End: Complemental strand, 39453728 - 39453660
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatc 268  Q
    ||||||||||||||||||||||| |||||||||| ||| ||||||||||||| |||| |||||||||||    
T  39453728 aggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgtattcgctaatc 39453660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 3528872 - 3528943
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||||||||| |||| ||| ||||||||||    
T  3528872 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtatttgctaatcctt 3528943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 254
Target Start/End: Original strand, 18247087 - 18247138
Alignment:
Q  203 gcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  18247087 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcc 18247138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 204 - 270
Target Start/End: Original strand, 39453302 - 39453369
Alignment:
Q  204 cttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcct 270  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||| ||| | |||||||||||    
T  39453302 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcct 39453369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 205 - 271
Target Start/End: Complemental strand, 43159239 - 43159172
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||  || ||||||||||||||    
T  43159239 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcgttgtattcgctaatcctt 43159172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 271
Target Start/End: Original strand, 5024019 - 5024089
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||| | | || ||||||||||||||    
T  5024019 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatacatgtattcgctaatcctt 5024089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 6150850 - 6150796
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||| ||||    
T  6150850 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattagtcc 6150796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 271
Target Start/End: Complemental strand, 11047861 - 11047795
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcctgcattcgctaatcctt 271  Q
    ||||||||||||||||||| ||||| |||| |||||||||||||||||| || |||| |||||||||    
T  11047861 ttaaatatgtatttcatccttgcaagtaggggtcgtttaaaaattggtcatgtattcactaatcctt 11047795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 11761748 - 11761818
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||||||||| |||| | |||||||||||    
T  11761748 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 11761818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 24547554 - 24547500
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcct 255  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||||||||||||    
T  24547554 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtcct 24547500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 38475429 - 38475375
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||||||||||||    
T  38475429 taggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtcc 38475375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 18670201 - 18670254
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||||||||||||||||||| ||||| |||| |||||||||||||||||||    
T  18670201 aggcttaaatatgtatttcatccttgcaagtaggggtcgtttaaaaattggtcc 18670254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 27587148 - 27587217
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||||| |||| | |||||||||||    
T  27587148 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 27587217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 186847 - 186795
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  186847 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcc 186795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 3529270 - 3529218
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  3529270 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtcc 3529218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 253
Target Start/End: Complemental strand, 5024443 - 5024395
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc 253  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  5024443 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 5024395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 20840867 - 20840815
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt 252  Q
    |||||||||||||||||||||||| | |||||||| |||||||||||||||||    
T  20840867 taggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggt 20840815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 29646360 - 29646432
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    ||||||||||||||||||| |||| || ||||||| ||| ||||||||||||||| || ||||||||||||||    
T  29646360 taggcttaaatatgtattttatccttgtaattaggggtcttttaaaaattggtccatgtattcgctaatcctt 29646432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 271
Target Start/End: Complemental strand, 5835851 - 5835784
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattgg-tcctgcattcgctaatcctt 271  Q
    ||||||||||||||||||| |||||||||| || ||||||||||||| | ||| ||||||||||||||    
T  5835851 ttaaatatgtatttcatccttgcaattaggagttgtttaaaaattggtttctgtattcgctaatcctt 5835784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 8322827 - 8322780
Alignment:
Q  207 aaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||    
T  8322827 aaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcc 8322780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 11740690 - 11740757
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  11740690 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccatatattcgctaatcctt 11740757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 35512146 - 35512217
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    |||| ||||||||||||||||||| |||||||| | ||||||||||||||||| |||| | |||||||||||    
T  35512146 taggtttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtaatcgctaatcct 35512217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 13362653 - 13362603
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcct 255  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||||||||    
T  13362653 ttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattggtcct 13362603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 254
Target Start/End: Original strand, 13962862 - 13962916
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||||||||| ||||| |||| |||||||||| |||||||||||||||||||    
T  13962862 taggcttaaatatatattttatccttgcaattaggggtcgtttaaaaattggtcc 13962916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 16156856 - 16156906
Alignment:
Q  203 gcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc 253  Q
    ||||||||||||||||||| | |||||||||| ||||||||||||||||||    
T  16156856 gcttaaatatgtatttcatacttgcaattaggggtcgtttaaaaattggtc 16156906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 17202398 - 17202468
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcct 270  Q
    |||||||||||| |||||||||| | |||||||| |||||||||||||||||| ||| | |||||||||||    
T  17202398 aggcttaaatatatatttcatccttccaattaggggtcgtttaaaaattggtcactgtaatcgctaatcct 17202468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 203 - 268
Target Start/End: Complemental strand, 19518034 - 19517968
Alignment:
Q  203 gcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatc 268  Q
    ||||||||||||||||||||| |||||||||| || ||||||||||| |||| || |||||||||||    
T  19518034 gcttaaatatgtatttcatccttgcaattaggggtagtttaaaaattagtccatgtattcgctaatc 19517968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 253
Target Start/End: Complemental strand, 19892747 - 19892685
Alignment:
Q  191 aataaaatgtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc 253  Q
    ||||||||  || |||||||||||||||||||| |||||||||  ||||||||||||||||||    
T  19892747 aataaaataaagtcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 19892685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 32242240 - 32242290
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattg 250  Q
    |||| ||||||||||||||||||| |||||||||| |||||||||||||||    
T  32242240 tagggttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattg 32242290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 35920612 - 35920543
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    |||||||||||||||||||||   ||||||||| ||||||||||||||||| |||| | |||||||||||    
T  35920612 ggcttaaatatgtatttcatcatagcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 35920543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 248
Target Start/End: Complemental strand, 38442494 - 38442449
Alignment:
Q  203 gcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaat 248  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||    
T  38442494 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaat 38442449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 6301970 - 6301901
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    |||||||||||||||||||||   |||||||||| ||||||||||||||||||| || ||||| ||||||||    
T  6301970 aggcttaaatatgtatttcatt--tgcaattaggggtcgtttaaaaattggtccttgtattcgttaatcctt 6301901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 268
Target Start/End: Complemental strand, 21265571 - 21265503
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattgg-tcctgcattcgctaatc 268  Q
    ||||||||||||||||||||||| | |||||| | |||||||||||||||| ||||| | |||||||||    
T  21265571 aggcttaaatatgtatttcatccttacaattaagggtcgtttaaaaattggttcctgtaatcgctaatc 21265503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 24547175 - 24547247
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||||| || |||| |||||||||| |||||| |||||||||| |||| | ||||||||||||    
T  24547175 taggcttaaatatgtacttgatccttgcaattaggggtcgttaaaaaattggtccctgtaatcgctaatcctt 24547247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 28771266 - 28771214
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||||||||||||| |||| || ||||||| |||||||||||||||||||    
T  28771266 ggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtcc 28771214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 37992714 - 37992670
Alignment:
Q  204 cttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaat 248  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  37992714 cttaaatatgtatttcatccatgcaattaggggtcgtttaaaaat 37992670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 252
Target Start/End: Complemental strand, 16083372 - 16083321
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt 252  Q
    ||||||||||||||||||||||| |||||||| |  ||||||||||||||||    
T  16083372 aggcttaaatatgtatttcatccttgcaattaaggatcgtttaaaaattggt 16083321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 268
Target Start/End: Complemental strand, 11741944 - 11741878
Alignment:
Q  203 gcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatc 268  Q
    ||||||||||||||||||||| || ||||||| ||| ||||||||| |||| ||| |||||||||||    
T  11741944 gcttaaatatgtatttcatccttgtaattaggggtcatttaaaaatcggtctctgtattcgctaatc 11741878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 42067954 - 42067900
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||| ||||||| ||||||||||||||||||| ||| ||||||| |||||||    
T  42067954 taggctttaatatgtgtttcatccctgcaattaggggtcatttaaaatttggtcc 42067900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 13963259 - 13963206
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc 253  Q
    ||||||||||||| |||||||||| || ||||| | ||||||||||||||||||    
T  13963259 taggcttaaatatatatttcatccttgtaattatgggtcgtttaaaaattggtc 13963206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 27937424 - 27937379
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattg 250  Q
    ||||||||||||||||||| |||||||| | |||||||||||||||    
T  27937424 ttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattg 27937379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 6301545 - 6301613
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    |||||||||||||||||||||   |||||||| | ||||||||||||||||||| || ||||||||||||||    
T  6301545 aggcttaaatatgtatttcat--ttgcaattatg-gtcgtttaaaaattggtccttgtattcgctaatcctt 6301613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 14194861 - 14194801
Alignment:
Q  191 aataaaatgtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattgg 251  Q
    |||||| | |||||||||| |||| |||||||| || ||||||| ||||||||||||||||    
T  14194861 aataaattataggcttaaaaatgtctttcatccttgtaattaggggtcgtttaaaaattgg 14194801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 28269809 - 28269762
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaat 248  Q
    |||||||||||||||||||||| | |||||||||| |||||||||||||    
T  28269809 taggcttaaatatgtatttcat-cttgcaattaggggtcgtttaaaaat 28269762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 30096970 - 30096918
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||| |||||||||||||| ||||||| ||| |||||||| ||||||    
T  30096970 ggcttaaatacgtatttcatccctgtaattaggggtcatttaaaaaatggtcc 30096918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 11047437 - 11047487
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtc-gtttaaaaattg 250  Q
    |||||||||||||||||||| || |||||||||| ||| ||||||||||||    
T  11047437 aggcttaaatatgtatttcacccttgcaattaggagtcagtttaaaaattg 11047487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 16082979 - 16083029
Alignment:
Q  204 cttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||||||||||||| | |||||||| || ||||||||||| ||||    
T  16082979 cttaaatatgtatttcatccttccaattaggggttgtttaaaaattagtcc 16083029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 27937053 - 27937087
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattagg 234  Q
    |||||||||||||||||||||||| ||||||||||    
T  27937053 taggcttaaatatgtatttcatccttgcaattagg 27937087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 271
Target Start/End: Original strand, 38475033 - 38475103
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    |||||||||||||||||||||   |||||||   ||| ||||||||||||||| || ||||||||||||||    
T  38475033 ggcttaaatatgtatttcatcatagcaattaaaggtcatttaaaaattggtccatgtattcgctaatcctt 38475103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 215 - 271
Target Start/End: Complemental strand, 5994304 - 5994247
Alignment:
Q  215 atttcatccctgcaattaggtgtcgtttaaaaattgg-tcctgcattcgctaatcctt 271  Q
    ||||||||| |||||||| | |||||||||||||||| || || ||||||||||||||    
T  5994304 atttcatccttgcaattaagggtcgtttaaaaattggttcatgtattcgctaatcctt 5994247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 24141451 - 24141504
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||| ||||||| |||| |||||||||||||  ||| |||||||||||||||    
T  24141451 aggctttaatatgtgtttcgtccctgcaattagacgtcatttaaaaattggtcc 24141504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 24205018 - 24204957
Alignment:
Q  209 atatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcctgcattcgctaatcct 270  Q
    |||||||||| |||  |||||||||| ||||||||||||||| || || | |||||||||||    
T  24205018 atatgtattttatctttgcaattaggggtcgtttaaaaattgatcatgtaatcgctaatcct 24204957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 232
Target Start/End: Complemental strand, 21979073 - 21979041
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaatta 232  Q
    |||||||||||||| ||||||||||||||||||    
T  21979073 taggcttaaatatgcatttcatccctgcaatta 21979041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 4e-22; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 33647390 - 33647309
Alignment:
Q  191 aataaaatgtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||  |||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  33647390 aataaaaattaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcctt 33647309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 30726189 - 30726117
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  30726189 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcctt 30726117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 3059685 - 3059614
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  3059685 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcctt 3059614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 33517963 - 33517892
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  33517963 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcctt 33517892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 681158 - 681086
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    ||||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||| ||||||||||||||    
T  681158 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatcctt 681086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 12081066 - 12080994
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||| || |||| ||||||||||||||    
T  12081066 taggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaatttgtccctgtattcgctaatcctt 12080994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 200 - 267
Target Start/End: Complemental strand, 13379912 - 13379844
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaat 267  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||| ||||||||||    
T  13379912 taggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaat 13379844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 20651008 - 20651080
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattgg-tcctgcattcgctaatcctt 271  Q
    ||||||||||||||||||| |||||||||||||||  ||||||||||||||| ||||| ||||||||||||||    
T  20651008 taggcttaaatatgtatttgatccctgcaattagggatcgtttaaaaattggttcctgtattcgctaatcctt 20651080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 26463177 - 26463248
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||| ||||| |||||||    
T  26463177 taggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgttaatcct 26463248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 197 - 270
Target Start/End: Original strand, 30337444 - 30337518
Alignment:
Q  197 atgtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    |||||||||||||||||||||| |||| |||||||||| ||||||||||||||||| |||| | |||||||||||    
T  30337444 atgtaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 30337518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 8090357 - 8090285
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    |||||||||||||||||| ||||| |||||||||| ||||||||||||||||||| || |||| |||||||||    
T  8090357 taggcttaaatatgtattacatccttgcaattaggggtcgtttaaaaattggtccttgtattcactaatcctt 8090285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 22617886 - 22617954
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaatt-ggtc-ctgcattcgctaatcctt 271  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| |||| ||||||||||||||||||    
T  22617886 ttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattgggtctctgcattcgctaatcctt 22617954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 679865 - 679936
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    |||||||||||||||||| |||| |||||||| | |||||||||||||||||| ||| ||||||||||||||    
T  679865 aggcttaaatatgtatttgatccttgcaattaagggtcgtttaaaaattggtctctgtattcgctaatcctt 679936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 21628142 - 21628072
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    ||||||||||||||||||||||| |||||||||| |||| |||||||||||| |||| | |||||||||||    
T  21628142 aggcttaaatatgtatttcatccttgcaattaggggtcgcttaaaaattggtccctgtaatcgctaatcct 21628072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 8089442 - 8089495
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||||||||||||| | |||||||||||||| |||||||||||||||||||    
T  8089442 aggcttaaatatgtattacctccctgcaattaggggtcgtttaaaaattggtcc 8089495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 11434804 - 11434869
Alignment:
Q  204 cttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatc 268  Q
    |||||||||||||||||||| |||||||| | ||||||||||||||||||| || |||||||||||    
T  11434804 cttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatc 11434869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 12408601 - 12408529
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    |||||||||||||||||||||||| | |||||||| || |||||||| ||||||| || ||||||||||||||    
T  12408601 taggcttaaatatgtatttcatccttacaattaggggttgtttaaaagttggtccttgtattcgctaatcctt 12408529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 26464627 - 26464575
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||| ||||||    
T  26464627 ggcttaaatatgtatttcatccctgcaattaggggtcatttaaaaaatggtcc 26464575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 267
Target Start/End: Complemental strand, 30804291 - 30804223
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaat 267  Q
    |||| ||||||||||||||||||| |||||||||| ||||||||||||||| | |||| ||||||||||    
T  30804291 taggattaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccctgtattcgctaat 30804223  T

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Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 252
Target Start/End: Original strand, 17734195 - 17734246
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt 252  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||||    
T  17734195 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 17734246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 250
Target Start/End: Original strand, 30803850 - 30803909
Alignment:
Q  191 aataaaatgtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattg 250  Q
    |||| ||| |||| ||||||||||||||||||| ||||| ||||||||||||||||||||    
T  30803850 aatagaatatagggttaaatatgtatttcatccttgcaactaggtgtcgtttaaaaattg 30803909  T

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Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 271
Target Start/End: Original strand, 12407508 - 12407578
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    |||||||||||||||||||||| | |||||| |  ||||||||||||||||| ||| ||||||||||||||    
T  12407508 ggcttaaatatgtatttcatccttacaattaaggatcgtttaaaaattggtctctgtattcgctaatcctt 12407578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 271
Target Start/End: Complemental strand, 15116660 - 15116590
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcct-gcattcgctaatcctt 271  Q
    ||||| |||||||||||| ||| |||||||||| |||||||||||||||||||| | | ||||||||||||    
T  15116660 ggctttaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtcctcgtaatcgctaatcctt 15116590  T

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Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 271
Target Start/End: Complemental strand, 30337846 - 30337776
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||||||| |||| |||||||||| ||| ||||||||||||| |||| | ||||||||||||    
T  30337846 ggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcctt 30337776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 30725760 - 30725828
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcct 270  Q
    |||||||||||||||||||| | |||||||||| |||||||||||||||||| ||| | |||||||||||    
T  30725760 ggcttaaatatgtatttcattcttgcaattagg-gtcgtttaaaaattggtctctgtaatcgctaatcct 30725828  T

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Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 15115339 - 15115391
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||||||||||||||| |||||||||   ||||||||||||||||||    
T  15115339 ggcttaaatatgtatttcatccttgcaattagagatcgtttaaaaattggtcc 15115391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 11393233 - 11393162
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||| |||||||||||||  || ||||||| ||||||||||||||||| || | ||||||||||||||    
T  11393233 aggcttaagtatgtatttcatctttgtaattaggggtcgtttaaaaattggtccccgtattcgctaatcctt 11393162  T

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Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 20652076 - 20652005
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||||||| || |||||||||| | ||||||||||||||| | |||| |||| |||||||||    
T  20652076 aggcttaaatatgtatttaattcctgcaattatgggtcgtttaaaaattgatccctgtattcactaatcctt 20652005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 21627712 - 21627783
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    ||||||||||||||||||||||| || ||||| |  |||||||||||||| ||| || ||||||||||||||    
T  21627712 aggcttaaatatgtatttcatccttgtaattaaggatcgtttaaaaattgatccatgtattcgctaatcctt 21627783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 250
Target Start/End: Original strand, 12080638 - 12080684
Alignment:
Q  204 cttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattg 250  Q
    ||||||| |||||||||||| |||||||||| |||||||||||||||    
T  12080638 cttaaatttgtatttcatccttgcaattaggggtcgtttaaaaattg 12080684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 270
Target Start/End: Original strand, 33517537 - 33517603
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    ||||||||||||||||||| || |||||||  |||||||||||||||| |||| | |||||||||||    
T  33517537 ttaaatatgtatttcatccttgtaattagggatcgtttaaaaattggtccctgtaatcgctaatcct 33517603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 28498455 - 28498400
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcct 255  Q
    ||||||| ||||||| |||| ||||||||||||||  || ||||||||||||||||    
T  28498455 taggctttaatatgtgtttcgtccctgcaattagggctcatttaaaaattggtcct 28498400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 29810866 - 29810811
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcct 255  Q
    ||||||| ||||||| |||| ||||||||||||||  || ||||||||||||||||    
T  29810866 taggctttaatatgtgtttcgtccctgcaattagggctcatttaaaaattggtcct 29810811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 3059255 - 3059301
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaa 246  Q
    |||| ||||||||||||||||||| |||||||| | |||||||||||    
T  3059255 taggtttaaatatgtatttcatccttgcaattaagggtcgtttaaaa 3059301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 8418461 - 8418414
Alignment:
Q  204 cttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt 252  Q
    |||||||||||||| ||||| ||||||||||  ||||||||||||||||    
T  8418461 cttaaatatgtatt-catccttgcaattaggaatcgtttaaaaattggt 8418414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 17734590 - 17734522
Alignment:
Q  203 gcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcct 270  Q
    |||||||||||||||| |||| | |||||| | ||||||||||||||| ||| || | |||||||||||    
T  17734590 gcttaaatatgtatttgatccttacaattatgggtcgtttaaaaattgatccatgtaatcgctaatcct 17734522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 51692949 - 51692877
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  51692949 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcctt 51692877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 199 - 254
Target Start/End: Complemental strand, 148186 - 148131
Alignment:
Q  199 gtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  148186 gtaggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtcc 148131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 10780712 - 10780783
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||    
T  10780712 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgcattcgctaatcctt 10780783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 10974321 - 10974392
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||    
T  10974321 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgcattcgctaatcctt 10974392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 24350861 - 24350790
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||||||||| |||||||||||||||||||    
T  24350861 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgcattcgctaatcctt 24350790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 271
Target Start/End: Original strand, 147319 - 147389
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||| |||| ||||||||||||||    
T  147319 ggcttaaatatgtatttcatccctacaattaggggtcgtttaaaaattggtccctgtattcgctaatcctt 147389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 10781914 - 10781842
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    ||||||||||||||||||| |||| |||||||||| ||||||||||||||||||| || ||||||||||||||    
T  10781914 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcctt 10781842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 24349672 - 24349744
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||||||||| |||| |||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  24349672 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcctt 24349744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 35027996 - 35028068
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattgg-tcctgcattcgctaatcctt 271  Q
    |||| ||||||||||||||||||| |||||||||| |||||||||||||||| ||||| ||||||||||||||    
T  35027996 taggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcctgtattcgctaatcctt 35028068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 55867550 - 55867490
Alignment:
Q  194 aaaatgtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  55867550 aaaatataggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtcc 55867490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 268
Target Start/End: Complemental strand, 18831745 - 18831678
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatc 268  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||| |||| |||||||||||    
T  18831745 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatc 18831678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 54086698 - 54086765
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||| ||| ||||||||||||||    
T  54086698 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatcctt 54086765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 1178056 - 1178126
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcctgcattcgctaatcctt 271  Q
    ||||||||||||||||||||||| || ||||||  |||||||||||||||||| || ||||||||||||||    
T  1178056 aggcttaaatatgtatttcatccttgtaattagaggtcgtttaaaaattggtcatgtattcgctaatcctt 1178126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 271
Target Start/End: Complemental strand, 7452231 - 7452161
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||| ||||||||||||||    
T  7452231 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatcctt 7452161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 192 - 254
Target Start/End: Original strand, 50418658 - 50418720
Alignment:
Q  192 ataaaatgtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||| ||||||||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  50418658 ataaaatataggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtcc 50418720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 46661343 - 46661290
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  46661343 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcc 46661290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 7451826 - 7451886
Alignment:
Q  194 aaaatgtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||| ||||||||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  7451826 aaaatttaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtcc 7451886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 14801735 - 14801787
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc 253  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  14801735 aggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtc 14801787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 17355924 - 17355992
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattgg-tcctgcattcgctaatc 268  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||| | ||| |||||||||||    
T  17355924 aggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggttgctgtattcgctaatc 17355992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 24411778 - 24411706
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||||||||||||| |||||||| | ||||||||||||||| | |||| ||||||||||||||    
T  24411778 taggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattgatccctgtattcgctaatcctt 24411706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 44967071 - 44967139
Alignment:
Q  204 cttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    ||||||||||||||| |||| |||||||||| |||||||||||||||||| ||| ||||||||||||||    
T  44967071 cttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatcctt 44967139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 1179229 - 1179158
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    |||||||||||||||||| |||  |||||||||| ||||||||||||||||||| || ||||||||||||||    
T  1179229 aggcttaaatatgtattttatctttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcctt 1179158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 13058035 - 13058106
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcct 270  Q
    ||||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||| | |||||||||||    
T  13058035 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcct 13058106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 13058411 - 13058340
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||||||| |||| |||||| ||| ||||||||||||||||| |||| ||||||||||||||    
T  13058411 aggcttaaatatgtatttgatccttgcaataaggggtcgtttaaaaattggtccctgtattcgctaatcctt 13058340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 271
Target Start/End: Complemental strand, 23613706 - 23613636
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||| | |||| ||||||||||||||    
T  23613706 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattgatccctgtattcgctaatcctt 23613636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 24711110 - 24711180
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||||||||| |||| | |||||||||||    
T  24711110 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 24711180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 24711510 - 24711456
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  24711510 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtcc 24711456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 50419067 - 50419013
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  50419067 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtcc 50419013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 252
Target Start/End: Original strand, 55866111 - 55866161
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt 252  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  55866111 ggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggt 55866161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 203 - 271
Target Start/End: Original strand, 15507674 - 15507743
Alignment:
Q  203 gcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||||||||||| |||||||| | ||||||||||||||||| |||  ||||||||||||||    
T  15507674 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctatattcgctaatcctt 15507743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 23613308 - 23613361
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  23613308 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtcc 23613361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 39539348 - 39539295
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc 253  Q
    |||||||||||||||||||||||| |||||||| | ||||||||||||||||||    
T  39539348 taggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtc 39539295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 16006219 - 16006151
Alignment:
Q  204 cttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    ||||||||||||||| || | |||||||||| |||||||||||||||||| ||| ||||||||||||||    
T  16006219 cttaaatatgtatttgattcttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatcctt 16006151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 34765378 - 34765450
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    ||||||||||||||||||| |||| |||||||| | ||||||||||||| ||||| || ||||||||||||||    
T  34765378 taggcttaaatatgtattttatccttgcaattaagggtcgtttaaaaatcggtccttgtattcgctaatcctt 34765450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 34765810 - 34765758
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt 252  Q
    ||||||||||||||||||| |||| |||||||||| |||||||||||||||||    
T  34765810 taggcttaaatatgtattttatccttgcaattaggggtcgtttaaaaattggt 34765758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 270
Target Start/End: Complemental strand, 44967473 - 44967397
Alignment:
Q  195 aaatgtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    |||| ||||||||||||||||||| |||| |||||||||  ||||||||||||||||| |||| | |||||||||||    
T  44967473 aaatctaggcttaaatatgtatttgatccttgcaattagaggtcgtttaaaaattggtccctgtaatcgctaatcct 44967397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 48528484 - 48528536
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc 253  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||||||||||    
T  48528484 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 48528536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 271
Target Start/End: Complemental strand, 11108265 - 11108198
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    ||||||||||||||||||| ||||||||||  |||||||||||||| ||| || ||||||||||||||    
T  11108265 ttaaatatgtatttcatccttgcaattagggatcgtttaaaaattgatccttgtattcgctaatcctt 11108198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 11448158 - 11448087
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||||| || ||| | ||||||||||||    
T  11448158 aggcttaaatatgtatttcgtccctgtaattaggggtcgtttaaaaattgatctctgtaatcgctaatcctt 11448087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 271
Target Start/End: Complemental strand, 37248630 - 37248563
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||| |||| |||||||||| ||||||||||||||||| |||| | ||||||||||||    
T  37248630 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctt 37248563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 43155532 - 43155599
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||| |||| |||||||| | ||||||||||||||||| |||| ||||||||||||||    
T  43155532 ttaaatatgtatttgatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatcctt 43155599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 254
Target Start/End: Original strand, 49879208 - 49879259
Alignment:
Q  203 gcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  49879208 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtcc 49879259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 53129935 - 53129864
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcct-gcattcgctaatcctt 271  Q
    ||||||||||||||||||||||| |||||| ||| ||||||||||||||| |||| | | ||||||||||||    
T  53129935 aggcttaaatatgtatttcatccttgcaatcaggggtcgtttaaaaattgatcctcgtaatcgctaatcctt 53129864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 5368946 - 5369000
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcct 255  Q
    |||||||||||||||||| |||| ||||||||||  |||||||||||||||||||    
T  5368946 aggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtcct 5369000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 270
Target Start/End: Complemental strand, 15508098 - 15508032
Alignment:
Q  204 cttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcctgcattcgctaatcct 270  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||  | || | |||||||||||    
T  15508098 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgtccttgtaatcgctaatcct 15508032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 18831348 - 18831418
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    |||||||||||||||||| |||| | |||||||| ||||||||||||||||| |||| | |||||||||||    
T  18831348 aggcttaaatatgtatttgatccttacaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 18831418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 40387466 - 40387536
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    |||||| ||||||| ||||||||||||||||||| | | ||||||||||||| |||| |||||||||||||    
T  40387466 aggctttaatatgtgtttcatccctgcaattaggggccatttaaaaattggtccctgtattcgctaatcct 40387536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 50751927 - 50751857
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcctgcattcgctaatcct 270  Q
    |||||||||  |||| ||||| ||||||||||||| |||||||||||||| |||||| | |||||||||||    
T  50751927 taggcttaatgatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtcctgtaatcgctaatcct 50751857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 51692551 - 51692601
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattg 250  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||||    
T  51692551 taggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattg 51692601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 250
Target Start/End: Complemental strand, 54435527 - 54435477
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattg 250  Q
    |||||||||||||||||||| | | ||||||||||||||||||||||||||    
T  54435527 taggcttaaatatgtatttcgtgcttgcaattaggtgtcgtttaaaaattg 54435477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 17356348 - 17356283
Alignment:
Q  204 cttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatc 268  Q
    |||||||||||||||||||| | |||||| | ||||||||||||||||| |||| |||||||||||    
T  17356348 cttaaatatgtatttcatccttccaattacgggtcgtttaaaaattggtccctgtattcgctaatc 17356283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 35028427 - 35028374
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||||||||||||||||||| |||||||||| ||  |||||||||||||||    
T  35028427 aggcttaaatatgtatttcatccttgcaattaggggtattttaaaaattggtcc 35028374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 268
Target Start/End: Original strand, 36008842 - 36008911
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatc 268  Q
    ||||||||||||||||||| |||| || |||||||  |||||||||||||||| |||| |||||||||||    
T  36008842 taggcttaaatatgtatttgatccttgtaattagggatcgtttaaaaattggtccctgtattcgctaatc 36008911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 268
Target Start/End: Original strand, 37976156 - 37976220
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattgg-tcctgcattcgctaatc 268  Q
    ||||||||||||||||||| |||||||||  |||||||||||| ||| ||||| |||||||||||    
T  37976156 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaactggttcctgtattcgctaatc 37976220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 52909254 - 52909322
Alignment:
Q  203 gcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcct 270  Q
    ||||||||||||||||||||  |||||||||| |||||| ||||||||||| ||| | |||||||||||    
T  52909254 gcttaaatatgtatttcatctttgcaattaggggtcgttcaaaaattggtcactgtaatcgctaatcct 52909322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 52909683 - 52909611
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    |||||||||||||||||||||||| |||||||| |  || ||||||||||||||  || ||||||||||||||    
T  52909683 taggcttaaatatgtatttcatccttgcaattatggatcatttaaaaattggtctatgtattcgctaatcctt 52909611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 270
Target Start/End: Original strand, 37248238 - 37248305
Alignment:
Q  204 cttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    ||||||||||||||| | || |||||||||| ||||||||||||||||| |||| | |||||||||||    
T  37248238 cttaaatatgtatttgaaccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 37248305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 41583661 - 41583590
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattg-gtcctgcattcgctaatcct 270  Q
    ||||||| ||||||| ||||||||||||||||||| ||| |||||||||||  | ||| |||||||||||||    
T  41583661 taggctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattgatttctgtattcgctaatcct 41583590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 271
Target Start/End: Complemental strand, 5369295 - 5369225
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||||||| |||| |  || |||| ||||||||||||||||| |||||||||| ||||||||    
T  5369295 ggcttaaatatgtatttgatccttataagtaggggtcgtttaaaaattggtccctgcattcgttaatcctt 5369225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 14802163 - 14802097
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaat 267  Q
    ||||||||||| |||||||||| |||||||||   |||||||||||||||||| || ||||||||||    
T  14802163 ggcttaaatatatatttcatccttgcaattagagatcgtttaaaaattggtccttgtattcgctaat 14802097  T

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Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 24411360 - 24411410
Alignment:
Q  204 cttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||||||||||||||||  ||||||||| || ||||||||||||||||    
T  24411360 cttaaatatgtatttcatcctagcaattaggggtagtttaaaaattggtcc 24411410  T

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Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 250
Target Start/End: Complemental strand, 37976583 - 37976533
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattg 250  Q
    |||||||||||||||||||||||   ||||||||| |||||||||||||||    
T  37976583 taggcttaaatatgtatttcatcatggcaattaggggtcgtttaaaaattg 37976533  T

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Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 254
Target Start/End: Original strand, 41582445 - 41582499
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||| ||||||| ||||||||||||||| ||| ||| |||||||||||||||    
T  41582445 taggctttaatatgtgtttcatccctgcaatcaggggtcatttaaaaattggtcc 41582499  T

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Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 43155926 - 43155872
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||||||||||||||| |||| |  ||||||| |||||||||||||||||||    
T  43155926 taggcttaaatatgtatttgatccttataattaggggtcgtttaaaaattggtcc 43155872  T

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Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 250
Target Start/End: Original strand, 53701814 - 53701860
Alignment:
Q  204 cttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattg 250  Q
    ||||||||| |||||||||| |||||||||| |||||||||||||||    
T  53701814 cttaaatatctatttcatccttgcaattaggggtcgtttaaaaattg 53701860  T

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Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 267
Target Start/End: Complemental strand, 53702227 - 53702161
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcctgcattcgctaat 267  Q
    ||||||||||||||||||||||  |||||||||  || ||||||||||||||| || ||||| ||||    
T  53702227 aggcttaaatatgtatttcatctttgcaattagaggttgtttaaaaattggtcatgtattcgttaat 53702161  T

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Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 54087121 - 54087071
Alignment:
Q  204 cttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||||||||||||  || ||||||| |||||||||||||||||||    
T  54087121 cttaaatatgtatttcatcattgtaattaggggtcgtttaaaaattggtcc 54087071  T

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Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 249
Target Start/End: Complemental strand, 35508670 - 35508621
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaatt 249  Q
    ||||||||||||||||||| |||  |||||||||| ||||||||||||||    
T  35508670 taggcttaaatatgtattttatcattgcaattaggggtcgtttaaaaatt 35508621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 252
Target Start/End: Complemental strand, 32063765 - 32063714
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt 252  Q
    |||||| |||||||||||  |||||||||||||| ||| |||||||||||||    
T  32063765 aggctttaatatgtattttgtccctgcaattaggggtcatttaaaaattggt 32063714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 36009244 - 36009189
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaatta-ggtgtcgtttaaaaattggtcc 254  Q
    ||||||||||||||||||| |||| || ||||| || |||||||||||||||||||    
T  36009244 taggcttaaatatgtatttgatccttgtaattagggggtcgtttaaaaattggtcc 36009189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 53129505 - 53129576
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgttt-aaaaattggtcctgcattcgctaatcctt 271  Q
    |||||||||||||||||| |||  ||||||||||  |||||| ||||||||||| || ||| ||||||||||    
T  53129505 aggcttaaatatgtattttatcattgcaattagggatcgtttaaaaaattggtcatgtatttgctaatcctt 53129576  T

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Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 235
Target Start/End: Original strand, 54713615 - 54713649
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggt 235  Q
    ||||||||||||||||||||||| |||||||||||    
T  54713615 aggcttaaatatgtatttcatccttgcaattaggt 54713649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 40388535 - 40388482
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||| ||||||| ||||||||||||||||| | | | |||||||||||||||    
T  40388535 aggctttaatatgtgtttcatccctgcaattaagggccatttaaaaattggtcc 40388482  T

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Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 270
Target Start/End: Original strand, 50750896 - 50750956
Alignment:
Q  211 atgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    |||| ||||| ||||||||||||| |||||||||||||| || |||| | |||||||||||    
T  50750896 atgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcct 50750956  T

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Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 53477190 - 53477150
Alignment:
Q  192 ataaaatgtaggcttaaatatgtatttcatccctgcaatta 232  Q
    ||||||| |||||||||||||| |||||||| |||||||||    
T  53477190 ataaaatttaggcttaaatatgcatttcatctctgcaatta 53477150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 44045432 - 44045360
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  44045432 taggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcctt 44045360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 25231278 - 25231207
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcct 270  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| || |||||||||||||    
T  25231278 taggcttaaatatgtatttaatccctgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcct 25231207  T

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Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 271
Target Start/End: Original strand, 25230102 - 25230172
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  25230102 ggcttaaatatgtatttaatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcctt 25230172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 6588686 - 6588753
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||| || ||||||||||||||    
T  6588686 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcctt 6588753  T

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Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 37895346 - 37895417
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||||||||||||| |||||||| | ||||||||||||||||| |||| ||||||||||||||    
T  37895346 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatcctt 37895417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 36382556 - 36382487
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcc 269  Q
    ||||||||||||||||||||||| |||||||| | ||||||||||||||||| |||| ||||||||||||    
T  36382556 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatcc 36382487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 36755517 - 36755464
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  36755517 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcc 36755464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 3555249 - 3555301
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc 253  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  3555249 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 3555301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 39423945 - 39423873
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||| | |||  ||||||||||||||    
T  39423945 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccctatattcgctaatcctt 39423873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 39498709 - 39498637
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    ||||||||||||||||||| |||| ||||||||||  |||||||||||||||||| || ||||||||||||||    
T  39498709 taggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccatgtattcgctaatcctt 39498637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 11163453 - 11163382
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    ||||||||||||||||||| |||| |||||||||| ||||||||||||||||| |||| | |||||||||||    
T  11163453 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 11163382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 16099453 - 16099382
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||||||||| |||| |||| |||||||||    
T  16099453 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcactaatcctt 16099382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 44044113 - 44044184
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||||||| ||||||||||||||| || |||||||||||||| |||| |||| |||||||||    
T  44044113 aggcttaaatatgtatttgatccctgcaattaggggtggtttaaaaattggtccctgtattcactaatcctt 44044184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 271
Target Start/End: Complemental strand, 6658275 - 6658205
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||||||| |||| |||||||||  ||||||||||||||||| |||| ||||||||||||||    
T  6658275 ggcttaaatatgtatttgatccttgcaattagaggtcgtttaaaaattggtccctgtattcgctaatcctt 6658205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 271
Target Start/End: Complemental strand, 10713151 - 10713081
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattgg-tcctgcattcgctaatcctt 271  Q
    |||||||||||||||||||||| |||||||| | |||||||||||||||| | ||| ||||||||||||||    
T  10713151 ggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtttctgtattcgctaatcctt 10713081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 15848087 - 15848157
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||||||| |||| | |||||||||||    
T  15848087 aggcttatatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 15848157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 271
Target Start/End: Original strand, 30729621 - 30729691
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||||||||||| |||||||||  ||||||||||||||||| |||  ||||||||||||||    
T  30729621 ggcttaaatatgtatttcatccttgcaattagacgtcgtttaaaaattggtccctatattcgctaatcctt 30729691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 6657870 - 6657930
Alignment:
Q  194 aaaatgtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||| ||||||||||||||||||| |||| ||||||| || |||||||||||||||||||    
T  6657870 aaaatctaggcttaaatatgtatttgatccttgcaatttggggtcgtttaaaaattggtcc 6657930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 15848518 - 15848466
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt 252  Q
    |||||||||||| ||||||||||| |||||||||| |||||||||||||||||    
T  15848518 taggcttaaataagtatttcatccttgcaattaggggtcgtttaaaaattggt 15848466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 36480144 - 36480076
Alignment:
Q  204 cttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||||||||| |||||||| | ||||||||||||||||| |||  ||||||||||||||    
T  36480144 cttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctatattcgctaatcctt 36480076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 268
Target Start/End: Complemental strand, 45556476 - 45556408
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatc 268  Q
    |||||||||||||||||| |||| || ||||||| |||||||||||||||||| ||| |||||||||||    
T  45556476 aggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtcgctgtattcgctaatc 45556408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 252
Target Start/End: Complemental strand, 2318939 - 2318888
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt 252  Q
    ||||||||||||||||||||||| | |||||||| |||||||||||||||||    
T  2318939 aggcttaaatatgtatttcatccttccaattaggggtcgtttaaaaattggt 2318888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 271
Target Start/End: Complemental strand, 13692637 - 13692578
Alignment:
Q  213 gtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||| |||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  13692637 gtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcctt 13692578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 34448225 - 34448171
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||| ||||||||||||| |||||||||| || ||||||||||||||||    
T  34448225 taggcttaaacatgtatttcatccttgcaattaggggttgtttaaaaattggtcc 34448171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 254
Target Start/End: Original strand, 36382159 - 36382213
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||||| |||||||||||||| ||||||||||  ||||||||||||||||||    
T  36382159 taggcttaagtatgtatttcatccttgcaattagggttcgtttaaaaattggtcc 36382213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 45556111 - 45556181
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    |||||||||||||||||| |||| ||||||||||  |||||||||||||||| |||| | |||||||||||    
T  45556111 aggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccctgtaatcgctaatcct 45556181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 34447812 - 34447865
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||||||||||||||||||| || ||||||| ||| |||||||||||||||    
T  34447812 aggcttaaatatgtatttcatccttgtaattaggggtcatttaaaaattggtcc 34447865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 9076495 - 9076444
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc 253  Q
    ||||||||||||||||| || | |||||||||| ||||||||||||||||||    
T  9076495 ggcttaaatatgtattttattcttgcaattaggggtcgtttaaaaattggtc 9076444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 255
Target Start/End: Original strand, 10712725 - 10712776
Alignment:
Q  204 cttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcct 255  Q
    ||||| |||||||||||||| ||||||||||  |||||||||||||||||||    
T  10712725 cttaagtatgtatttcatccttgcaattagggttcgtttaaaaattggtcct 10712776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 36479719 - 36479770
Alignment:
Q  204 cttaaatatgtatttcatccct-gcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||||||||||||| | ||||||||| |||||||||||||||||||    
T  36479719 cttaaatatgtatttcatcctttgcaattaggggtcgtttaaaaattggtcc 36479770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 2318160 - 2318209
Alignment:
Q  203 gcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc 253  Q
    ||||||||||||||||||||| |||||||||| || |||||||||||||||    
T  2318160 gcttaaatatgtatttcatccttgcaattagg-gtagtttaaaaattggtc 2318209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 271
Target Start/End: Original strand, 11163054 - 11163124
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||||||| |||  ||||||||   ||||||||||||||||| |||| ||||||||||||||    
T  11163054 ggcttaaatatgtatttgatctttgcaattaaaggtcgtttaaaaattggtccctgtattcgctaatcctt 11163124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 254
Target Start/End: Original strand, 28228668 - 28228722
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||| ||||||| |||| |||||||||||||| ||| |||||||||||||||    
T  28228668 taggctttaatatgtgtttcgtccctgcaattaggggtcatttaaaaattggtcc 28228722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 271
Target Start/End: Original strand, 44713799 - 44713865
Alignment:
Q  206 taaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    |||||||||||||||||| || ||||| | ||||||||||||||||||  || ||||||||||||||    
T  44713799 taaatatgtatttcatccttgtaattaagggtcgtttaaaaattggtcaatgtattcgctaatcctt 44713865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 44714190 - 44714137
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||||||||||| |||||||| |||||||||| |||||||||||||| ||||    
T  44714190 taggcttaaatatgt-tttcatccttgcaattaggggtcgtttaaaaattagtcc 44714137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 6307145 - 6307094
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||||||||||||||  |||||||||  |||||||||||||||||||    
T  6307145 ggcttaaatatgtatttcatct-tgcaattagtggtcgtttaaaaattggtcc 6307094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 16099055 - 16099107
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||||||||||||| || | |||||||||| ||| |||||||||||||||    
T  16099055 ggcttaaatatgtatttgattcttgcaattaggggtcatttaaaaattggtcc 16099107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 3556437 - 3556386
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc 253  Q
    |||||||||||  ||||||||| |||||||| | ||||||||||||||||||    
T  3556437 ggcttaaatatacatttcatccttgcaattatgggtcgtttaaaaattggtc 3556386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 252
Target Start/End: Complemental strand, 37895772 - 37895725
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt 252  Q
    ||||||||||||||||||| |||||||| | |||||||||||| ||||    
T  37895772 ttaaatatgtatttcatccttgcaattatgggtcgtttaaaaaatggt 37895725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 253
Target Start/End: Original strand, 39423515 - 39423566
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc 253  Q
    |||||||||| ||||||||||| || ||||| | ||||||||||||||||||    
T  39423515 ggcttaaatacgtatttcatccttgtaattacgggtcgtttaaaaattggtc 39423566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 271
Target Start/End: Complemental strand, 21370630 - 21370560
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    |||||||||||||||||||||| || |||||   ||||||||||||||| ||| || ||||| ||||||||    
T  21370630 ggcttaaatatgtatttcatccttgtaattataggtcgtttaaaaattgatccatgtattcgttaatcctt 21370560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 22051421 - 22051352
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcct 270  Q
    |||||||||||||||||||| | |||||||||  || ||||||||||| ||| ||| | |||||||||||    
T  22051421 ggcttaaatatgtatttcattcttgcaattagaggttgtttaaaaattagtctctgtaatcgctaatcct 22051352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 39498317 - 39498362
Alignment:
Q  209 atatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||| |||| || ||||||| |||||||||||||||||||    
T  39498317 atatgtatttgatccttgtaattaggggtcgtttaaaaattggtcc 39498362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 43742105 - 43742052
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||| |||||||||||| ||||||||||| |  ||| |||||||||||||||    
T  43742105 aggcttcaatatgtatttcgtccctgcaattggaggtcatttaaaaattggtcc 43742052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 24387349 - 24387381
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaatta 232  Q
    |||||||||||||| ||||||||||||||||||    
T  24387349 taggcttaaatatgcatttcatccctgcaatta 24387381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 232
Target Start/End: Complemental strand, 24388358 - 24388326
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaatta 232  Q
    |||||||||||||| ||||||||||||||||||    
T  24388358 taggcttaaatatgcatttcatccctgcaatta 24388326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 39935454 - 39935505
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt 252  Q
    ||||||| ||||||| |||| ||| ||||||||||||| ||||||||||||||    
T  39935454 taggctttaatatgtgtttcgtcc-tgcaattaggtgtggtttaaaaattggt 39935505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 6508 - 6437
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  6508 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcctt 6437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 7e-21; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 20426760 - 20426689
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||| |||||||||||||    
T  20426760 taggcttaaatatgtatttcatccctgcaattagaggtcgtttaaaaattggtccctgtattcgctaatcct 20426689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 24389214 - 24389143
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||| || ||||||||||||||    
T  24389214 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcctt 24389143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 271
Target Start/End: Original strand, 42362450 - 42362520
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  42362450 ggcttaaatatgtatttcatccttgcaattaggtgtcgtttaaaaattggtccttgtattcgttaatcctt 42362520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 5457337 - 5457265
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||| || ||||| ||||||||    
T  5457337 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtattcgttaatcctt 5457265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 45011034 - 45010962
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattgg-tcctgcattcgctaatcctt 271  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||| || || ||||||||||||||    
T  45011034 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatcctt 45010962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 48788801 - 48788873
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||||||||||| | |||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  48788801 taggcttaaatatgtatttcattcttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcctt 48788873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 2640177 - 2640248
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||||||||||||| | |||||||| ||||||||||||||||| |||| ||||||||||||||    
T  2640177 aggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtacctgtattcgctaatcctt 2640248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 6253869 - 6253798
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||||||||||| || ||||||||||||||    
T  6253869 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtattcgctaatcctt 6253798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 10936223 - 10936152
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    ||||||||||||||||||||||| |||||||||| || |||||||||||||||| || ||||||||||||||    
T  10936223 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggtccttgtattcgctaatcctt 10936152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 17102419 - 17102348
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcct 270  Q
    ||||||||||||||||||| |||| |||||||||| ||||||||||||||||||| || |||||||||||||    
T  17102419 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcct 17102348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 27397025 - 27396954
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||| | |||||||||||    
T  27397025 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 27396954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 28469009 - 28469063
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcct 255  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  28469009 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcct 28469063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 28469438 - 28469384
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  28469438 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcc 28469384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 271
Target Start/End: Complemental strand, 40380112 - 40380042
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||| || |||||| |||||||    
T  40380112 ggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtccatgtattcgccaatcctt 40380042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 271
Target Start/End: Original strand, 43123175 - 43123245
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||| |||| |||| |||||||||    
T  43123175 ggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggtccctgtattcactaatcctt 43123245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 29144412 - 29144359
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc 253  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  29144412 taggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggtc 29144359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 271
Target Start/End: Original strand, 42019598 - 42019667
Alignment:
Q  203 gcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    ||||||||||||||||||||| |||||||| | ||||||||||||||||||| || ||||||||||||||    
T  42019598 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatcctt 42019667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 27396619 - 27396699
Alignment:
Q  192 ataaaatgtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    |||||||  ||||||||||||||||||||||| || ||||||| | ||||||||||||||||| || ||||||||||||||    
T  27396619 ataaaataaaggcttaaatatgtatttcatccttgtaattaggggccgtttaaaaattggtccatgtattcgctaatcctt 27396699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 205 - 271
Target Start/End: Complemental strand, 27992133 - 27992066
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||| |||| |||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  27992133 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcctt 27992066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 32298776 - 32298847
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||| |||| |||| ||||||||||||||    
T  32298776 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaactggtccctgtattcgctaatcctt 32298847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 17102019 - 17102089
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||||||||| |||| | |||||||||||    
T  17102019 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 17102089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 34793903 - 34793957
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcct 255  Q
    |||||||||||||||||| |||||||||| |||| ||||||||||||||||||||    
T  34793903 aggcttaaatatgtattttatccctgcaaataggggtcgtttaaaaattggtcct 34793957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 6571012 - 6571065
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  6571012 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtcc 6571065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 10935794 - 10935863
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    ||||||||| |||||||||||| |||||||||| ||||||||||||||||| |||| | |||||||||||    
T  10935794 ggcttaaatgtgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 10935863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 24388821 - 24388886
Alignment:
Q  204 cttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatc 268  Q
    |||||||||||||||||||| |||||||| | |||||||||||||||||| ||| |||||||||||    
T  24388821 cttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtctctgtattcgctaatc 24388886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 28105490 - 28105571
Alignment:
Q  191 aataaaatgtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||  |||||||||||||||||||||||| |||||||| | |||||||||||||| || |||| |||| |||||||||    
T  28105490 aataaaaattaggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaatttgtccctgtattcactaatcctt 28105571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 203 - 271
Target Start/End: Complemental strand, 34799585 - 34799516
Alignment:
Q  203 gcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    |||||||||||||||| |||||||||| |||| ||||||||||||||||||| |||| || |||||||||    
T  34799585 gcttaaatatgtatttgatccctgcaaataggggtcgtttaaaaattggtccttgcaatcactaatcctt 34799516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 207 - 271
Target Start/End: Original strand, 40379774 - 40379839
Alignment:
Q  207 aaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||  || ||||||||||||||    
T  40379774 aaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctttgtattcgctaatcctt 40379839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 202 - 255
Target Start/End: Original strand, 42731419 - 42731472
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcct 255  Q
    ||||||||||||||| |||||| |||||||||| ||||||||||||||||||||    
T  42731419 ggcttaaatatgtatctcatccttgcaattaggggtcgtttaaaaattggtcct 42731472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 6253472 - 6253540
Alignment:
Q  203 gcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    |||||||||||||||| |||| |||||||||| ||||||||||||||||| |||| | |||||||||||    
T  6253472 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 6253540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 32299132 - 32299064
Alignment:
Q  203 gcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    |||||||||||||||| |||| |||||||||| ||||||||||||||||| |||| | |||||||||||    
T  32299132 gcttaaatatgtatttgatccttgcaattaggagtcgtttaaaaattggtccctgtaatcgctaatcct 32299064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 271
Target Start/End: Complemental strand, 13386175 - 13386105
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||||||| || | |||||||||| ||||||||||||||||| |||  ||||||||||||||    
T  13386175 ggcttaaatatgtatttaatacttgcaattaggggtcgtttaaaaattggtccctatattcgctaatcctt 13386105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 271
Target Start/End: Complemental strand, 18670291 - 18670221
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||| |||| |||| ||||| ||||||||    
T  18670291 ggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatcctt 18670221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 271
Target Start/End: Original strand, 33808323 - 33808393
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    |||||||||||||||||||| | || ||||| | |||||||||||||||||| ||| ||||||||||||||    
T  33808323 ggcttaaatatgtatttcattcttgaaattacgcgtcgtttaaaaattggtctctgtattcgctaatcctt 33808393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 270
Target Start/End: Original strand, 37656855 - 37656921
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcct 270  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||||||| ||| | |||||||||||    
T  37656855 ttaaatatgtatttcatccttgcaattaggaatcgtttaaaaattggtctctgtaatcgctaatcct 37656921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 271
Target Start/End: Complemental strand, 37657265 - 37657195
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||||||||||| ||||||||||  |||||||||||||| | |||| ||||| ||||||||    
T  37657265 ggcttaaatatgtatttcatccttgcaattagggatcgtttaaaaattgatccctgtattcgttaatcctt 37657195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 250
Target Start/End: Complemental strand, 42731849 - 42731799
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattg 250  Q
    |||||||||||||||||||||||| || ||||||| |||||||||||||||    
T  42731849 taggcttaaatatgtatttcatccttgtaattaggggtcgtttaaaaattg 42731799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 271
Target Start/End: Complemental strand, 1960302 - 1960233
Alignment:
Q  203 gcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    |||||||||||||||| |||||||||| |||| |||| |||||| ||||||| ||||||| |||||||||    
T  1960302 gcttaaatatgtatttgatccctgcaaataggggtcgcttaaaatttggtccttgcattcactaatcctt 1960233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 19204488 - 19204541
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||||||||||| |||| || ||||||| |||||||||||||||||||    
T  19204488 aggcttaaatatgtatttgatccttgaaattaggggtcgtttaaaaattggtcc 19204541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 22871706 - 22871653
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||||||||||| |||| |||||||||| ||| |||||||||||||||    
T  22871706 aggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtcc 22871653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 29141605 - 29141556
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattg 250  Q
    ||||||||||||||||||||||| |||||||||  |||||||||||||||    
T  29141605 aggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattg 29141556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 17886920 - 17886848
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    |||||||||||||||||||||||| ||||||||||  || ||||||||||| ||| || ||||| ||||||||    
T  17886920 taggcttaaatatgtatttcatccttgcaattagggatcatttaaaaattgatccatgtattcgttaatcctt 17886848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 20425476 - 20425528
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt 252  Q
    |||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  20425476 taggcttaaatatgtaattcatccctgcaattagggatcatttaaaaattggt 20425528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 254
Target Start/End: Complemental strand, 23181421 - 23181370
Alignment:
Q  203 gcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||||||||||||||||  |||||||||| |||||||||| ||||||||    
T  23181421 gcttaaatatgtatttcatcattgcaattaggggtcgtttaaatattggtcc 23181370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 252
Target Start/End: Complemental strand, 42020022 - 42019975
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt 252  Q
    ||||||||||||||||||| |||||||||| || ||||||||||||||    
T  42020022 ttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggt 42019975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 27991738 - 27991808
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    |||||||||||||||||| |||| |||||||||| |||||||| |||||| | |||| | |||||||||||    
T  27991738 aggcttaaatatgtatttgatccttgcaattaggggtcgtttagaaattgatccctgtaatcgctaatcct 27991808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 30127440 - 30127489
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattg 250  Q
    |||||||||||||||||  |||||||||||||||  ||||||||||||||    
T  30127440 aggcttaaatatgtattcaatccctgcaattagggatcgtttaaaaattg 30127489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 32053142 - 32053195
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||||||||||||||||||| || ||||| | ||||||||||||| |||||    
T  32053142 aggcttaaatatgtatttcatccttgtaattatgggtcgtttaaaaatcggtcc 32053195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 12930762 - 12930802
Alignment:
Q  192 ataaaatgtaggcttaaatatgtatttcatccctgcaatta 232  Q
    ||||||| |||||||||||||| ||||||||||||||||||    
T  12930762 ataaaatttaggcttaaatatgcatttcatccctgcaatta 12930802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 47945356 - 47945427
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattgg-tcctgcattcgctaatcctt 271  Q
    ||||| ||||||||||||||||  ||||||| ||  ||||||||||||||| || || ||||||||||||||    
T  47945356 aggctcaaatatgtatttcatcgttgcaattggggatcgtttaaaaattggttcatgtattcgctaatcctt 47945427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 47950786 - 47950857
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattgg-tcctgcattcgctaatcctt 271  Q
    ||||| ||||||||||||||||  ||||||| ||  ||||||||||||||| || || ||||||||||||||    
T  47950786 aggctcaaatatgtatttcatcgttgcaattggggatcgtttaaaaattggttcatgtattcgctaatcctt 47950857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 254
Target Start/End: Original strand, 18086287 - 18086341
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||| ||||||| |||  ||| |||||||||| |||||||||||||||||||    
T  18086287 taggctttaatatgtgtttagtccttgcaattaggagtcgtttaaaaattggtcc 18086341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 229
Target Start/End: Original strand, 12929277 - 12929314
Alignment:
Q  192 ataaaatgtaggcttaaatatgtatttcatccctgcaa 229  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  12929277 ataaaatttaggcttaaatatgcatttcatccctgcaa 12929314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 268
Target Start/End: Complemental strand, 42363808 - 42363747
Alignment:
Q  207 aaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcctgcattcgctaatc 268  Q
    |||||| |||||||| | ||||||| |  ||||||||||||||||||||| ||||| |||||    
T  42363808 aaatatatatttcattcttgcaatttgacgtcgtttaaaaattggtcctgtattcgttaatc 42363747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 270
Target Start/End: Original strand, 32934357 - 32934417
Alignment:
Q  211 atgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcct 270  Q
    |||| |||||||| |||||||||||||| |||||||||| ||| ||| | |||||||||||    
T  32934357 atgtgtttcatccttgcaattaggtgtcatttaaaaattagtcgctgtaatcgctaatcct 32934417  T

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Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 38643548 - 38643580
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaatta 232  Q
    |||||||||||||| ||||||||||||||||||    
T  38643548 taggcttaaatatgcatttcatccctgcaatta 38643580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 271
Target Start/End: Complemental strand, 69393 - 69323
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  69393 ggcttaaatatgtatttcatccttgcaattagatgtcgtttaaaaattggtccctgtattcgctaatcctt 69323  T

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Target: scaffold0031; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 68965 - 69017
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  68965 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtcc 69017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 3e-20; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 271
Target Start/End: Complemental strand, 3850555 - 3850485
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||| ||||||||    
T  3850555 ggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtccctgtattcgataatcctt 3850485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 201 - 267
Target Start/End: Original strand, 33689381 - 33689447
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcctgcattcgctaat 267  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||| || ||||||||||    
T  33689381 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcatgtattcgctaat 33689447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 271
Target Start/End: Complemental strand, 36418116 - 36418046
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattgg-tcctgcattcgctaatcctt 271  Q
    |||||||||||||||||||||| || ||||||| |||||||||||||||| ||||| ||||||||||||||    
T  36418116 ggcttaaatatgtatttcatccttgtaattaggggtcgtttaaaaattggttcctgtattcgctaatcctt 36418046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 40033891 - 40033834
Alignment:
Q  195 aaatgtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt 252  Q
    |||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  40033891 aaatataggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 40033834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 40758147 - 40758216
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcct 270  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||| || | |||||||||||    
T  40758147 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcct 40758216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 9294386 - 9294334
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  9294386 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcc 9294334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 9367739 - 9367811
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||||| ||||| ||| ||||||||||||||    
T  9367739 taggcttaaatatgtatttaatccctacaattaggggtcgtttaaaaaatggtctctgtattcgctaatcctt 9367811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 23458409 - 23458337
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    |||||||||||||||||||||||| |||||||| | |||||||||||||||||| ||| | ||||||||||||    
T  23458409 taggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtctctgtaatcgctaatcctt 23458337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 40758540 - 40758468
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||  || ||||||||||||||    
T  40758540 taggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtctatgtattcgctaatcctt 40758468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 3849030 - 3849101
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||| | |||||||||||||||||| ||||||||||||||||| |||| ||||| ||||||||    
T  3849030 aggcttaaatatgaaattcatccctgcaattaggagtcgtttaaaaattggtccctgtattcgttaatcctt 3849101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 36150530 - 36150580
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcct 255  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  36150530 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcct 36150580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 271
Target Start/End: Complemental strand, 41558306 - 41558240
Alignment:
Q  206 taaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    ||||||||||||||||||||||||||||| ||||||||||||||  ||| || ||||||||||||||    
T  41558306 taaatatgtatttcatccctgcaattaggggtcgtttaaaaattaatccatgtattcgctaatcctt 41558240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 254
Target Start/End: Original strand, 42342789 - 42342843
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||||||||||||||||| | |||||||| |||||||||||||||||||    
T  42342789 taggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtcc 42342843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 271
Target Start/End: Complemental strand, 46475205 - 46475139
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcctgcattcgctaatcctt 271  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||| | ||| ||||||||||||||    
T  46475205 ttaaatatgtatttcatccttacaattaggggtcgtttaaaaattgatactgtattcgctaatcctt 46475139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 19741321 - 19741268
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  19741321 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtcc 19741268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 203 - 271
Target Start/End: Original strand, 35712045 - 35712114
Alignment:
Q  203 gcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    ||||||||||||||||||||| ||||||||||  || ||||||||||||||| || ||||||||||||||    
T  35712045 gcttaaatatgtatttcatccttgcaattagggatcatttaaaaattggtccatgtattcgctaatcctt 35712114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 203 - 271
Target Start/End: Complemental strand, 53757150 - 53757081
Alignment:
Q  203 gcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    ||||||||||||||||||| | |||||||||  ||||||||||||||||||| || ||||||||||||||    
T  53757150 gcttaaatatgtatttcattcttgcaattagaagtcgtttaaaaattggtccatgtattcgctaatcctt 53757081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 1079653 - 1079597
Alignment:
Q  198 tgtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||||| ||||||| ||||||||||||||||||| ||| |||||||||||||||    
T  1079653 tgtaggctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattggtcc 1079597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 270
Target Start/End: Original strand, 2796172 - 2796248
Alignment:
Q  195 aaatgtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    |||| ||||||||||||||||||| |||| |||||||||| ||| ||||||||||||| |||| | |||||||||||    
T  2796172 aaatataggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcct 2796248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 33689809 - 33689757
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt 252  Q
    |||||||||||||||||||||||  |||||||||| |||||||||||||||||    
T  33689809 taggcttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattggt 33689757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 34142646 - 34142594
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  34142646 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtcc 34142594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 41558006 - 41558078
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||||||||||| | |||||||| | ||||||||||||||||| | || ||||||||||||||    
T  41558006 taggcttaaatatgtatttcattcttgcaattatgggtcgtttaaaaattggtacttgtattcgctaatcctt 41558078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 51993962 - 51994034
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||||||||| |||  |||||||||  ||||||||||||||||| |||| ||||||||||||||    
T  51993962 taggcttaaatatgtatttgatctttgcaattagaggtcgtttaaaaattggtccctgtattcgctaatcctt 51994034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 267
Target Start/End: Complemental strand, 2796526 - 2796459
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaat 267  Q
    ||||||||||||||| ||||||| |||||||||| || |||||||||||||||| || ||||||||||    
T  2796526 aggcttaaatatgtacttcatccttgcaattaggagttgtttaaaaattggtccatgtattcgctaat 2796459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 53856486 - 53856415
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    |||||||||||||||||| |||||||||| |||| |||| |||||||||||||| || |||| |||||||||    
T  53856486 aggcttaaatatgtatttgatccctgcaaataggggtcgcttaaaaattggtccttgtattcactaatcctt 53856415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 4322590 - 4322660
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcctgcattcgctaatcct 270  Q
    |||||||||  |||| ||||| ||||||||||||| |||||||||||||| |||||| | |||||||||||    
T  4322590 taggcttaatgatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtcctgtaatcgctaatcct 4322660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 267
Target Start/End: Original strand, 53856015 - 53856081
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaat 267  Q
    ||||||||||||||||| |||||||||| |||| |||| |||||||||||||| ||||||| |||||    
T  53856015 ggcttaaatatgtatttgatccctgcaaataggggtcgcttaaaaattggtccttgcattcactaat 53856081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 9292245 - 9292294
Alignment:
Q  204 cttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc 253  Q
    |||||||||||||||||||| ||||||||||  |||||||||||||||||    
T  9292245 cttaaatatgtatttcatccttgcaattagggatcgtttaaaaattggtc 9292294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 271
Target Start/End: Original strand, 23457988 - 23458049
Alignment:
Q  211 atgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||| |||||||| | ||||||||||||||||| |||| ||||||||||||||    
T  23457988 atgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatcctt 23458049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 19740921 - 19740993
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||||||||||||||||| || | ||||||||||  |||||||||||||||| |||| | ||||||||||||    
T  19740921 taggcttaaatatgtatttgattcatgcaattagggatcgtttaaaaattggtccctgtaatcgctaatcctt 19740993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 25107212 - 25107264
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc 253  Q
    |||||||| ||||| ||||||||||||||||||| ||| ||||||||||||||    
T  25107212 aggcttaagtatgtgtttcatccctgcaattaggggtcatttaaaaattggtc 25107264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 26464015 - 26463963
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc 253  Q
    ||||||||||||||||||||||| |||||||||   |||||||||||||||||    
T  26464015 aggcttaaatatgtatttcatccttgcaattagagatcgtttaaaaattggtc 26463963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 253
Target Start/End: Original strand, 46474818 - 46474866
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc 253  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||||||    
T  46474818 ttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattggtc 46474866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 51994313 - 51994261
Alignment:
Q  203 gcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcct 255  Q
    |||||||||||||||| |||| ||||||||||  |||||||||||||||||||    
T  51994313 gcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtcct 51994261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 254
Target Start/End: Complemental strand, 23276410 - 23276359
Alignment:
Q  203 gcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||| ||||||| ||||||||||||||||||| ||| |||||||||||||||    
T  23276410 gctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattggtcc 23276359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 26463635 - 26463702
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatcctt 271  Q
    ||||||||||||||||||| |||||||| | ||||||||||||||| ||| || ||||| ||||||||    
T  26463635 ttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattgatccttgtattcggtaatcctt 26463702  T

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Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 36417691 - 36417758
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    ||||| |||| |||||||| || ||||||| ||||||||||||||||| |||| ||||||||||||||    
T  36417691 ttaaacatgtctttcatccttgtaattaggggtcgtttaaaaattggtccctgtattcgctaatcctt 36417758  T

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Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 255
Target Start/End: Original strand, 47856385 - 47856440
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcct 255  Q
    ||||||| ||||||| |||| |||||||||||| | ||||||||||||||||||||    
T  47856385 taggctttaatatgtgtttcgtccctgcaattaagcgtcgtttaaaaattggtcct 47856440  T

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Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 254
Target Start/End: Complemental strand, 9368723 - 9368677
Alignment:
Q  208 aatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||||| ||| |||||||||| |||||||||||||||||||    
T  9368723 aatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtcc 9368677  T

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Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 249
Target Start/End: Complemental strand, 43384709 - 43384664
Alignment:
Q  204 cttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaatt 249  Q
    |||||||||||||||||||| ||||||||||  |||||||||||||    
T  43384709 cttaaatatgtatttcatccttgcaattaggaatcgtttaaaaatt 43384664  T

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Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 53756747 - 53756792
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattg 250  Q
    ||||||||||||||||||  |||||||||| |||||||||||||||    
T  53756747 ttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattg 53756792  T

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Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 268
Target Start/End: Complemental strand, 42343156 - 42343092
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaatc 268  Q
    ||||||||||||||||||| || ||||| | ||||||||||||||| ||| || |||||||||||    
T  42343156 ttaaatatgtatttcatccttgtaattaagggtcgtttaaaaattgatccatgtattcgctaatc 42343092  T

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Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 47857673 - 47857625
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattg 250  Q
    ||||| ||||||| |||| |||||| |||||||||||||||||||||||    
T  47857673 ggctttaatatgtgtttcgtccctgtaattaggtgtcgtttaaaaattg 47857625  T

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Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 254
Target Start/End: Original strand, 1078534 - 1078589
Alignment:
Q  199 gtaggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||| ||||||| |||| ||| |||||||||| ||| |||||||||||||||    
T  1078534 gtaggctttaatatgtttttcgtccatgcaattaggggtcatttaaaaattggtcc 1078589  T

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Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 203 - 254
Target Start/End: Complemental strand, 25108522 - 25108471
Alignment:
Q  203 gcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||| ||||||| ||||||||||||||||||| ||| ||||||| |||||||    
T  25108522 gctttaatatgtgtttcatccctgcaattaggggtcatttaaaatttggtcc 25108471  T

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Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 270
Target Start/End: Complemental strand, 32431614 - 32431551
Alignment:
Q  208 aatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    |||||||||||| |||||| ||||||| ||| ||||||||||||| |||||| ||| |||||||    
T  32431614 aatatgtatttcgtccctgtaattaggggtcatttaaaaattggtccctgcaatcgttaatcct 32431551  T

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Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 55052295 - 55052362
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc-ctgcattcgctaatcctt 271  Q
    |||||||||||||| |||| |  ||||||| ||||| |||||||||||| ||| ||||||||||||||    
T  55052295 ttaaatatgtatttgatccttataattaggggtcgtctaaaaattggtctctgtattcgctaatcctt 55052362  T

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Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 270
Target Start/End: Complemental strand, 4323621 - 4323561
Alignment:
Q  211 atgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    |||| ||||| ||||||||||||| |||||||||||||| || |||| | |||||||||||    
T  4323621 atgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcct 4323561  T

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Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 21783403 - 21783468
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattgg-tcctgcattcgctaatcctt 271  Q
    ||||||||||||||||||| || ||||| | |||||||  ||||||| ||||| ||||||||||||||    
T  21783403 ttaaatatgtatttcatccttgtaattaagggtcgttt--aaattggttcctgtattcgctaatcctt 21783468  T

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Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 23272822 - 23272874
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt 252  Q
    ||||||| ||||||| |||||||||||||||||||  |  |||||||||||||    
T  23272822 taggctttaatatgtctttcatccctgcaattagggattatttaaaaattggt 23272874  T

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Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 33154877 - 33154929
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||| ||||| |||| ||| |||||||||| ||| |||||||||||||||    
T  33154877 ggcttaagtatgtgtttcgtccatgcaattaggggtcatttaaaaattggtcc 33154929  T

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Target: scaffold0775 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 4960 - 5032
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcctt 271  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||| | |||  ||||||||||||||    
T  4960 taggcttaaatatgtatttcatccctacaattaggggtcgtttaaaaattgatccctatattcgctaatcctt 5032  T

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Target: scaffold0005 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 37992 - 37940
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc 253  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  37992 aggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtc 37940  T

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Target: scaffold0005; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 267
Target Start/End: Original strand, 37564 - 37630
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc-tgcattcgctaat 267  Q
    ||||||||||| |||||||||| |||||||||   |||||||||||||||||| || ||||||||||    
T  37564 ggcttaaatatatatttcatccttgcaattagagatcgtttaaaaattggtccttgtattcgctaat 37630  T

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Target: scaffold0007 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 2170 - 2117
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  2170 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtcc 2117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 254
Target Start/End: Original strand, 1767 - 1821
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||||||||||||||| |||| |||||||||| |||||| ||||||||||||    
T  1767 taggcttaaatatgtatttgatccttgcaattaggggtcgttaaaaaattggtcc 1821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 14818 - 14767
Alignment:
Q  202 ggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc 253  Q
    |||||||||||| ||||||||| |||||||||| ||||||||||||||||||    
T  14818 ggcttaaatatgaatttcatccttgcaattaggggtcgtttaaaaattggtc 14767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 249
Target Start/End: Original strand, 14427 - 14476
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaatt 249  Q
    |||||||||||||||||||||||  |||||||||| ||||||||||||||    
T  14427 taggcttaaatatgtatttcatcattgcaattaggagtcgtttaaaaatt 14476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 139670 - 139741
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggt-cctgcattcgctaatcct 270  Q
    |||| |||||||||||||| |||| |||||||||| ||||||||||||||||| |||| | |||||||||||    
T  139670 taggattaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 139741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 140066 - 140017
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    |||||||||||||| |||| |||||||||| || ||||||||||||||||    
T  140066 ttaaatatgtatttgatccttgcaattaggggttgtttaaaaattggtcc 140017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 19860 - 19909
Alignment:
Q  205 ttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcc 254  Q
    ||||||||||||||| ||| |||||||| | |||||||||||||||||||    
T  19860 ttaaatatgtatttcgtccttgcaattatgggtcgtttaaaaattggtcc 19909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 2558 - 2506
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtc 253  Q
    ||||||||||||||||||||| | ||||||||||  |||||| ||||||||||    
T  2558 aggcttaaatatgtatttcattcttgcaattagggatcgttttaaaattggtc 2506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 24775 - 24721
Alignment:
Q  201 aggcttaaatatgtatttcatccctgcaattaggtgtcgtttaaaaattggtcct 255  Q
    |||||| ||||||| |||||||||||||  |||| ||| ||||||||||||||||    
T  24775 aggctttaatatgtttttcatccctgcatataggggtcatttaaaaattggtcct 24721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 260999 - 261031
Alignment:
Q  200 taggcttaaatatgtatttcatccctgcaatta 232  Q
    |||||||||||||| ||||||||||||||||||    
T  260999 taggcttaaatatgcatttcatccctgcaatta 261031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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