View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3002_low_133 (Length: 237)

Name: NF3002_low_133
Description: NF3002
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3002_low_133
NF3002_low_133
[»] chr5 (8 HSPs)
chr5 (99-222)||(31507998-31508121)
chr5 (79-222)||(8465615-8465755)
chr5 (70-115)||(31508120-31508165)
chr5 (73-114)||(3523381-3523422)
chr5 (73-114)||(28748446-28748487)
chr5 (73-114)||(31069844-31069885)
chr5 (153-222)||(34561483-34561551)
chr5 (71-115)||(8465562-8465606)
[»] chr3 (6 HSPs)
chr3 (102-222)||(44415972-44416088)
chr3 (71-114)||(16066438-16066481)
chr3 (73-114)||(8600503-8600544)
chr3 (73-114)||(25615025-25615066)
chr3 (74-115)||(33638644-33638685)
chr3 (74-114)||(44773408-44773448)
[»] chr7 (9 HSPs)
chr7 (73-114)||(10165898-10165939)
chr7 (73-114)||(40475045-40475086)
chr7 (71-113)||(46400340-46400382)
chr7 (73-114)||(45919345-45919386)
chr7 (73-113)||(22628212-22628252)
chr7 (70-114)||(33381829-33381873)
chr7 (73-114)||(22628310-22628351)
chr7 (73-114)||(43986050-43986091)
chr7 (73-113)||(45919126-45919166)
[»] chr2 (2 HSPs)
chr2 (71-114)||(41194798-41194841)
chr2 (78-114)||(9623382-9623418)
[»] chr6 (1 HSPs)
chr6 (71-115)||(12896823-12896867)
[»] chr4 (5 HSPs)
chr4 (75-114)||(23516764-23516803)
chr4 (71-114)||(26464329-26464372)
chr4 (71-114)||(38936190-38936233)
chr4 (73-114)||(31878780-31878821)
chr4 (73-114)||(46172517-46172558)
[»] chr8 (3 HSPs)
chr8 (73-110)||(14334798-14334835)
chr8 (73-114)||(14335498-14335538)
chr8 (73-114)||(34361174-34361215)
[»] chr1 (5 HSPs)
chr1 (73-114)||(8066094-8066135)
chr1 (73-114)||(15648747-15648788)
chr1 (73-114)||(22872093-22872134)
chr1 (73-114)||(32130354-32130395)
chr1 (73-114)||(34387403-34387444)


Alignment Details
Target: chr5 (Bit Score: 100; Significance: 1e-49; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 99 - 222
Target Start/End: Complemental strand, 31508121 - 31507998
Alignment:
Q  99 aaaacaacttattttaatcagtaaaacgacttatatgtttaaatctgaataattattatactcagatataaagcgttggttaacttttttcctagcattt 198  Q
    |||||| |||||||||||||||||||||| |||||||||||||||| |||||||||| |||||| |||||||||||||||||| ||||||||||||||||    
T  31508121 aaaacagcttattttaatcagtaaaacgatttatatgtttaaatctaaataattattgtactcatatataaagcgttggttaatttttttcctagcattt 31508022  T
Q  199 ttcatgtttattatcggtaaaact 222  Q
    ||||||||||||||||||||||||    
T  31508021 ttcatgtttattatcggtaaaact 31507998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 222
Target Start/End: Original strand, 8465615 - 8465755
Alignment:
Q  79 ttatgcaaaacaacttcttc-aaaacaacttattttaatcagtaaaacgacttatatgtttaaatctgaataattattatactcagatataaagcgttgg 177  Q
    |||| ||||||||||| ||  |||||| |||||||||||||||||||| |||||||||||||||||| | ||   |||||||||| ||| |||| |||||    
T  8465615 ttattcaaaacaacttattttaaaacagcttattttaatcagtaaaacaacttatatgtttaaatctaacta---attatactcatatacaaagtgttgg 8465711  T
Q  178 ttaacttttttcctagcatttttcatgtttattatcggtaaaact 222  Q
    |||| |||||||| |||||||||||||||||||||| ||||||||    
T  8465712 ttaa-ttttttcccagcatttttcatgtttattatcagtaaaact 8465755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 115
Target Start/End: Complemental strand, 31508165 - 31508120
Alignment:
Q  70 tagcttattttatgcaaaacaacttcttcaaaacaacttattttaa 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  31508165 tagcttattttatgcaaaacaacttcttcaaaacaacttattttaa 31508120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 3523381 - 3523422
Alignment:
Q  73 cttattttatgcaaaacaacttcttcaaaacaacttatttta 114  Q
    |||||||| || |||||||||| |||||||||||||||||||    
T  3523381 cttattttctgaaaaacaacttattcaaaacaacttatttta 3523422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 28748446 - 28748487
Alignment:
Q  73 cttattttatgcaaaacaacttcttcaaaacaacttatttta 114  Q
    |||||||||||||||| ||||| ||||||| |||||||||||    
T  28748446 cttattttatgcaaaataacttattcaaaaaaacttatttta 28748487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 31069844 - 31069885
Alignment:
Q  73 cttattttatgcaaaacaacttcttcaaaacaacttatttta 114  Q
    |||||||||||||||| ||||| ||||||||| |||||||||    
T  31069844 cttattttatgcaaaaaaacttattcaaaacagcttatttta 31069885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 222
Target Start/End: Complemental strand, 34561551 - 34561483
Alignment:
Q  153 attatactcagatataaagcgttggttaacttttttcctagcatttttcatgtttattatcggtaaaact 222  Q
    ||||||| || |||||||| ||| ||||| ||||||||||||||||| || |||||||||  ||||||||    
T  34561551 attatacccatatataaagtgttagttaa-ttttttcctagcattttccaagtttattataagtaaaact 34561483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 8465562 - 8465606
Alignment:
Q  71 agcttattttatgcaaaacaacttcttcaaaacaacttattttaa 115  Q
    ||||||||||||| ||||||  || ||||||||||||||||||||    
T  8465562 agcttattttatgaaaaacagtttattcaaaacaacttattttaa 8465606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 222
Target Start/End: Complemental strand, 44416088 - 44415972
Alignment:
Q  102 acaacttattttaatcagtaaaacgacttatatgtttaaatctgaataattattatactcagatataaagcgttggttaacttttttcctagcatttttc 201  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||   |||||||||| |||||||| ||||||||| |||||||||||||| ||||    
T  44416088 acaacttattttaatcagtaaaaggacttatatgtttaaatctaaata---attatactcatatataaagtgttggttaa-ttttttcctagcatgtttc 44415993  T
Q  202 atgtttattatcggtaaaact 222  Q
    |||||||||||| ||||||||    
T  44415992 atgtttattatcagtaaaact 44415972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 114
Target Start/End: Complemental strand, 16066481 - 16066438
Alignment:
Q  71 agcttattttatgcaaaacaacttcttcaaaacaacttatttta 114  Q
    |||||||||||||||||||||||| ||||||||| |||||||||    
T  16066481 agcttattttatgcaaaacaacttattcaaaacagcttatttta 16066438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 8600503 - 8600544
Alignment:
Q  73 cttattttatgcaaaacaacttcttcaaaacaacttatttta 114  Q
    |||||||||||||||||||||| ||||||||| |||||||||    
T  8600503 cttattttatgcaaaacaacttattcaaaacagcttatttta 8600544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 114
Target Start/End: Complemental strand, 25615066 - 25615025
Alignment:
Q  73 cttattttatgcaaaacaacttcttcaaaacaacttatttta 114  Q
    |||||||||||||||||||||| ||||||||| |||||||||    
T  25615066 cttattttatgcaaaacaacttattcaaaacagcttatttta 25615025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 115
Target Start/End: Original strand, 33638644 - 33638685
Alignment:
Q  74 ttattttatgcaaaacaacttcttcaaaacaacttattttaa 115  Q
    ||||||||||||||||||||| ||||||| ||||||||||||    
T  33638644 ttattttatgcaaaacaacttattcaaaataacttattttaa 33638685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 114
Target Start/End: Complemental strand, 44773448 - 44773408
Alignment:
Q  74 ttattttatgcaaaacaacttcttcaaaacaacttatttta 114  Q
    ||||||||||||||||||||| |||||||||  ||||||||    
T  44773448 ttattttatgcaaaacaacttattcaaaacagtttatttta 44773408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 114
Target Start/End: Complemental strand, 10165939 - 10165898
Alignment:
Q  73 cttattttatgcaaaacaacttcttcaaaacaacttatttta 114  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  10165939 cttattttatgcaaaacaacttattcaaaacaacttatttta 10165898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 40475045 - 40475086
Alignment:
Q  73 cttattttatgcaaaacaacttcttcaaaacaacttatttta 114  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  40475045 cttattttatgcaaaacaacttattcaaaacaacttatttta 40475086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 46400340 - 46400382
Alignment:
Q  71 agcttattttatgcaaaacaacttcttcaaaacaacttatttt 113  Q
    |||||||||||||||||||| ||| ||||||||||||||||||    
T  46400340 agcttattttatgcaaaacaccttattcaaaacaacttatttt 46400382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 114
Target Start/End: Complemental strand, 45919386 - 45919345
Alignment:
Q  73 cttattttatgcaaaacaacttcttcaaaacaacttatttta 114  Q
    |||||||||||||||||||||| ||||||||| |||||||||    
T  45919386 cttattttatgcaaaacaacttattcaaaacagcttatttta 45919345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 22628252 - 22628212
Alignment:
Q  73 cttattttatgcaaaacaacttcttcaaaacaacttatttt 113  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  22628252 cttattttatgcaaaacaacttattcaacacaacttatttt 22628212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 114
Target Start/End: Complemental strand, 33381873 - 33381829
Alignment:
Q  70 tagcttattttatgcaaaacaacttcttcaaaacaacttatttta 114  Q
    |||||||||||||| |||||||||| ||||||||| |||||||||    
T  33381873 tagcttattttatgaaaaacaacttattcaaaacagcttatttta 33381829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 114
Target Start/End: Complemental strand, 22628351 - 22628310
Alignment:
Q  73 cttattttatgcaaaacaacttcttcaaaacaacttatttta 114  Q
    ||||| |||||||||| ||||| |||||||||||||||||||    
T  22628351 cttatattatgcaaaataacttattcaaaacaacttatttta 22628310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 43986050 - 43986091
Alignment:
Q  73 cttattttatgcaaaacaacttcttcaaaacaacttatttta 114  Q
    ||||||||||| | |||||||| |||||||||||||||||||    
T  43986050 cttattttatgaataacaacttattcaaaacaacttatttta 43986091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 45919126 - 45919166
Alignment:
Q  73 cttattttatgcaaaacaacttcttcaaaacaacttatttt 113  Q
    ||||||||||| |||||| ||| ||||||||||||||||||    
T  45919126 cttattttatgaaaaacagcttattcaaaacaacttatttt 45919166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 114
Target Start/End: Complemental strand, 41194841 - 41194798
Alignment:
Q  71 agcttattttatgcaaaacaacttcttcaaaacaacttatttta 114  Q
    ||||||||||||| |||||||||| |||||||||||||||||||    
T  41194841 agcttattttatgaaaaacaacttattcaaaacaacttatttta 41194798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 114
Target Start/End: Complemental strand, 9623418 - 9623382
Alignment:
Q  78 tttatgcaaaacaacttcttcaaaacaacttatttta 114  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  9623418 tttatgcaaaacaacttattcaaaacagcttatttta 9623382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 12896823 - 12896867
Alignment:
Q  71 agcttattttatgcaaaacaacttcttcaaaacaacttattttaa 115  Q
    |||| ||||||||||||||| ||| ||||||||||||||||||||    
T  12896823 agctaattttatgcaaaacatcttattcaaaacaacttattttaa 12896867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 32; Significance: 0.000000005; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 114
Target Start/End: Original strand, 23516764 - 23516803
Alignment:
Q  75 tattttatgcaaaacaacttcttcaaaacaacttatttta 114  Q
    |||||||||||||||||||| ||||||||| |||||||||    
T  23516764 tattttatgcaaaacaacttattcaaaacagcttatttta 23516803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 114
Target Start/End: Original strand, 26464329 - 26464372
Alignment:
Q  71 agcttattttatgcaaaacaacttcttcaaaacaacttatttta 114  Q
    ||||||||||||| |||||||||| ||||||||| |||||||||    
T  26464329 agcttattttatgaaaaacaacttattcaaaacagcttatttta 26464372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 114
Target Start/End: Original strand, 38936190 - 38936233
Alignment:
Q  71 agcttattttatgcaaaacaacttcttcaaaacaacttatttta 114  Q
    ||||||||||||| |||||||||| ||||||||| |||||||||    
T  38936190 agcttattttatgaaaaacaacttattcaaaacagcttatttta 38936233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 114
Target Start/End: Complemental strand, 31878821 - 31878780
Alignment:
Q  73 cttattttatgcaaaacaacttcttcaaaacaacttatttta 114  Q
    |||||||||||||||||||||| ||||||||| || ||||||    
T  31878821 cttattttatgcaaaacaacttattcaaaacagctcatttta 31878780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 46172517 - 46172558
Alignment:
Q  73 cttattttatgcaaaacaacttcttcaaaacaacttatttta 114  Q
    |||| ||||||||||||||||| ||||||||| |||||||||    
T  46172517 cttactttatgcaaaacaacttattcaaaacagcttatttta 46172558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 30; Significance: 0.00000008; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 110
Target Start/End: Original strand, 14334798 - 14334835
Alignment:
Q  73 cttattttatgcaaaacaacttcttcaaaacaacttat 110  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  14334798 cttattttatgcaaaacaacttattcaaaacagcttat 14334835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 14335498 - 14335538
Alignment:
Q  73 cttattttatgcaaaacaacttcttcaaaacaacttatttta 114  Q
    ||||||||||| |||||||||| |||||||||||||||||||    
T  14335498 cttattttatg-aaaacaacttattcaaaacaacttatttta 14335538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 34361174 - 34361215
Alignment:
Q  73 cttattttatgcaaaacaacttcttcaaaacaacttatttta 114  Q
    |||||||||||||||||||||| |||||| || |||||||||    
T  34361174 cttattttatgcaaaacaacttattcaaagcagcttatttta 34361215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 30; Significance: 0.00000008; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 8066094 - 8066135
Alignment:
Q  73 cttattttatgcaaaacaacttcttcaaaacaacttatttta 114  Q
    |||||||||||||||| ||||| ||||||||| |||||||||    
T  8066094 cttattttatgcaaaagaacttattcaaaacagcttatttta 8066135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 114
Target Start/End: Complemental strand, 15648788 - 15648747
Alignment:
Q  73 cttattttatgcaaaacaacttcttcaaaacaacttatttta 114  Q
    ||||||||||| |||||||||| ||||||||| |||||||||    
T  15648788 cttattttatgaaaaacaacttattcaaaacagcttatttta 15648747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 22872093 - 22872134
Alignment:
Q  73 cttattttatgcaaaacaacttcttcaaaacaacttatttta 114  Q
    |||| ||||||||||||||||| ||||||||| |||||||||    
T  22872093 cttactttatgcaaaacaacttattcaaaacagcttatttta 22872134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 114
Target Start/End: Complemental strand, 32130395 - 32130354
Alignment:
Q  73 cttattttatgcaaaacaacttcttcaaaacaacttatttta 114  Q
    ||||||||||| |||||||||| ||||||||| |||||||||    
T  32130395 cttattttatgaaaaacaacttattcaaaacagcttatttta 32130354  T

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Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 114
Target Start/End: Complemental strand, 34387444 - 34387403
Alignment:
Q  73 cttattttatgcaaaacaacttcttcaaaacaacttatttta 114  Q
    |||||||| || |||||||||| |||||||||||||||||||    
T  34387444 cttattttctgaaaaacaacttattcaaaacaacttatttta 34387403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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