View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3002_low_19 (Length: 537)

Name: NF3002_low_19
Description: NF3002
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3002_low_19
NF3002_low_19
[»] chr3 (54 HSPs)
chr3 (12-446)||(28909420-28909849)
chr3 (117-315)||(20288141-20288339)
chr3 (130-318)||(3455554-3455743)
chr3 (107-295)||(42684897-42685085)
chr3 (234-315)||(9338470-9338551)
chr3 (108-300)||(3208500-3208693)
chr3 (170-300)||(24403255-24403385)
chr3 (206-315)||(43174712-43174821)
chr3 (204-300)||(37735322-37735418)
chr3 (180-303)||(18458637-18458760)
chr3 (107-192)||(14745107-14745192)
chr3 (23-85)||(37981498-37981560)
chr3 (23-85)||(44175796-44175858)
chr3 (107-280)||(53420352-53420526)
chr3 (165-300)||(18442268-18442399)
chr3 (165-300)||(19487342-19487473)
chr3 (265-318)||(20336693-20336746)
chr3 (233-318)||(43173884-43173969)
chr3 (232-300)||(34818102-34818170)
chr3 (23-85)||(3807816-3807878)
chr3 (233-295)||(55328338-55328400)
chr3 (23-84)||(33705418-33705479)
chr3 (248-308)||(5122309-5122369)
chr3 (117-245)||(20336574-20336702)
chr3 (204-280)||(50809457-50809533)
chr3 (204-280)||(50810838-50810914)
chr3 (204-280)||(50864950-50865026)
chr3 (204-280)||(50866329-50866405)
chr3 (167-282)||(53194837-53194952)
chr3 (117-199)||(36175379-36175461)
chr3 (108-197)||(10301053-10301142)
chr3 (265-318)||(20314800-20314853)
chr3 (120-281)||(10732048-10732210)
chr3 (143-174)||(3208625-3208656)
chr3 (143-174)||(3455569-3455600)
chr3 (251-294)||(23443508-23443551)
chr3 (107-166)||(24487226-24487284)
chr3 (143-174)||(27841654-27841685)
chr3 (143-174)||(35371048-35371079)
chr3 (165-280)||(38240942-38241056)
chr3 (143-174)||(38242460-38242491)
chr3 (134-216)||(11224776-11224858)
chr3 (144-174)||(11224787-11224817)
chr3 (13-99)||(12107795-12107879)
chr3 (110-199)||(34819194-34819286)
chr3 (165-295)||(40364340-40364470)
chr3 (252-281)||(10730920-10730949)
chr3 (108-181)||(38242423-38242496)
chr3 (117-198)||(48083345-48083426)
chr3 (252-281)||(53612906-53612935)
chr3 (108-216)||(10338838-10338946)
chr3 (143-179)||(12107918-12107954)
chr3 (233-281)||(36176540-36176588)
chr3 (108-156)||(54110192-54110239)
[»] scaffold2071 (1 HSPs)
scaffold2071 (107-318)||(588-799)
[»] chr7 (45 HSPs)
chr7 (15-290)||(46201157-46201431)
chr7 (179-319)||(25533185-25533325)
chr7 (165-318)||(9662202-9662354)
chr7 (207-318)||(38539669-38539780)
chr7 (22-198)||(669212-669386)
chr7 (120-318)||(13564158-13564357)
chr7 (165-303)||(33779052-33779187)
chr7 (117-302)||(11344521-11344703)
chr7 (107-198)||(35295817-35295908)
chr7 (168-303)||(43459468-43459602)
chr7 (143-295)||(47060419-47060570)
chr7 (237-327)||(27743-27833)
chr7 (23-85)||(5095296-5095358)
chr7 (23-85)||(24051433-24051495)
chr7 (23-85)||(39752378-39752440)
chr7 (237-318)||(35130-35211)
chr7 (143-282)||(22115107-22115246)
chr7 (143-300)||(40508394-40508551)
chr7 (143-300)||(40509677-40509834)
chr7 (206-318)||(46202289-46202401)
chr7 (206-300)||(30333301-30333395)
chr7 (117-198)||(46835791-46835875)
chr7 (108-198)||(43441464-43441554)
chr7 (117-198)||(2414863-2414944)
chr7 (120-280)||(32255025-32255187)
chr7 (107-156)||(48312200-48312248)
chr7 (252-304)||(3414886-3414938)
chr7 (117-282)||(43460739-43460905)
chr7 (252-300)||(47059124-47059172)
chr7 (143-174)||(32255131-32255162)
chr7 (143-174)||(40811461-40811492)
chr7 (233-300)||(45454054-45454121)
chr7 (179-294)||(45455352-45455466)
chr7 (252-282)||(32256447-32256477)
chr7 (204-282)||(32602967-32603045)
chr7 (107-181)||(40811456-40811530)
chr7 (259-300)||(669447-669488)
chr7 (261-294)||(10942313-10942346)
chr7 (145-174)||(35295841-35295870)
chr7 (266-318)||(9660119-9660171)
chr7 (187-259)||(9660730-9660802)
chr7 (147-179)||(22115104-22115136)
chr7 (251-303)||(30311520-30311572)
chr7 (147-179)||(40509674-40509706)
chr7 (51-99)||(41078940-41078988)
[»] chr1 (58 HSPs)
chr1 (130-318)||(48096962-48097149)
chr1 (131-318)||(15746697-15746884)
chr1 (107-318)||(46318525-46318735)
chr1 (165-318)||(46467144-46467297)
chr1 (219-318)||(42244629-42244728)
chr1 (107-300)||(15072697-15072890)
chr1 (206-318)||(15743274-15743386)
chr1 (165-299)||(16123304-16123438)
chr1 (51-198)||(9226067-9226213)
chr1 (233-318)||(42245920-42246005)
chr1 (233-300)||(836226-836293)
chr1 (109-192)||(13147325-13147408)
chr1 (186-317)||(46468705-46468836)
chr1 (23-85)||(8027462-8027524)
chr1 (143-293)||(41873914-41874064)
chr1 (206-315)||(7161366-7161474)
chr1 (28-185)||(6049254-6049410)
chr1 (234-294)||(51042376-51042436)
chr1 (206-292)||(30535675-30535761)
chr1 (243-300)||(835261-835318)
chr1 (117-295)||(10722293-10722473)
chr1 (143-300)||(14470872-14471029)
chr1 (143-290)||(14477734-14477881)
chr1 (233-300)||(15071358-15071425)
chr1 (233-300)||(24499688-24499755)
chr1 (212-318)||(20064174-20064280)
chr1 (165-295)||(44276143-44276272)
chr1 (261-318)||(18818974-18819031)
chr1 (212-293)||(20069899-20069980)
chr1 (107-200)||(48527650-48527743)
chr1 (143-179)||(41873911-41873947)
chr1 (120-199)||(3617417-3617496)
chr1 (108-199)||(5612993-5613083)
chr1 (107-198)||(12665909-12665999)
chr1 (252-327)||(15232741-15232816)
chr1 (252-295)||(33369247-33369290)
chr1 (117-204)||(35943364-35943451)
chr1 (117-199)||(41872692-41872775)
chr1 (220-295)||(44278369-44278444)
chr1 (206-281)||(49802901-49802976)
chr1 (252-326)||(11661563-11661637)
chr1 (266-304)||(12667341-12667379)
chr1 (252-294)||(28757039-28757081)
chr1 (252-290)||(34352008-34352046)
chr1 (165-303)||(44795199-44795336)
chr1 (22-72)||(45584827-45584877)
chr1 (242-295)||(10711807-10711860)
chr1 (233-294)||(16963856-16963917)
chr1 (141-174)||(16965070-16965103)
chr1 (259-320)||(26287843-26287904)
chr1 (107-156)||(27556429-27556477)
chr1 (141-174)||(48096977-48097010)
chr1 (270-318)||(18821809-18821857)
chr1 (165-280)||(23091387-23091503)
chr1 (143-179)||(34350253-34350289)
chr1 (143-179)||(35943387-35943423)
chr1 (143-171)||(46110421-46110449)
chr1 (206-318)||(49801615-49801727)
[»] scaffold0011 (2 HSPs)
scaffold0011 (117-318)||(127431-127632)
scaffold0011 (206-318)||(128597-128709)
[»] chr4 (67 HSPs)
chr4 (130-318)||(40723225-40723413)
chr4 (58-318)||(7053178-7053434)
chr4 (165-318)||(13533226-13533378)
chr4 (165-318)||(53432060-53432213)
chr4 (13-315)||(28590718-28591020)
chr4 (146-313)||(53435699-53435866)
chr4 (176-318)||(40724820-40724960)
chr4 (165-300)||(52963585-52963719)
chr4 (222-300)||(2162625-2162703)
chr4 (130-317)||(34326729-34326913)
chr4 (236-318)||(668384-668466)
chr4 (233-310)||(669678-669755)
chr4 (165-315)||(14524816-14524966)
chr4 (204-318)||(38698032-38698146)
chr4 (206-300)||(40792767-40792861)
chr4 (207-315)||(28589782-28589890)
chr4 (108-198)||(2312388-2312481)
chr4 (117-303)||(11438485-11438671)
chr4 (108-199)||(56085464-56085555)
chr4 (51-198)||(15449926-15450075)
chr4 (23-85)||(22161578-22161640)
chr4 (23-85)||(23317125-23317187)
chr4 (23-85)||(25922201-25922263)
chr4 (23-85)||(50997281-50997343)
chr4 (171-300)||(390233-390361)
chr4 (232-300)||(2310939-2311007)
chr4 (146-282)||(6348189-6348324)
chr4 (251-318)||(54485596-54485663)
chr4 (237-318)||(38695541-38695622)
chr4 (242-294)||(3921173-3921225)
chr4 (237-317)||(34328414-34328494)
chr4 (58-280)||(52239913-52240136)
chr4 (251-290)||(1190243-1190282)
chr4 (178-281)||(4871342-4871445)
chr4 (107-198)||(19750201-19750292)
chr4 (107-198)||(19789514-19789605)
chr4 (141-179)||(1794551-1794589)
chr4 (120-281)||(10168702-10168864)
chr4 (143-281)||(13165531-13165668)
chr4 (107-156)||(45535205-45535253)
chr4 (206-291)||(54865130-54865214)
chr4 (143-179)||(13165635-13165671)
chr4 (22-74)||(38555101-38555153)
chr4 (252-300)||(42872351-42872399)
chr4 (267-318)||(22069233-22069284)
chr4 (107-198)||(26629909-26629999)
chr4 (108-198)||(27850845-27850938)
chr4 (143-174)||(52240018-52240049)
chr4 (117-198)||(4871611-4871693)
chr4 (143-173)||(6348294-6348324)
chr4 (141-179)||(6349491-6349529)
chr4 (233-291)||(40445390-40445448)
chr4 (123-197)||(56157419-56157493)
chr4 (233-282)||(1829787-1829836)
chr4 (261-318)||(20625565-20625622)
chr4 (107-156)||(23103916-23103964)
chr4 (233-282)||(27850965-27851014)
chr4 (251-300)||(31968443-31968492)
chr4 (141-174)||(40723365-40723398)
chr4 (251-300)||(49344061-49344110)
chr4 (22-99)||(49896408-49896484)
chr4 (259-327)||(1521253-1521321)
chr4 (267-303)||(3921088-3921123)
chr4 (143-179)||(4714160-4714196)
chr4 (266-318)||(13531143-13531195)
chr4 (187-259)||(13531754-13531826)
chr4 (176-280)||(42871131-42871234)
[»] chr5 (43 HSPs)
chr5 (120-316)||(8521255-8521449)
chr5 (120-318)||(1010286-1010482)
chr5 (165-315)||(32757826-32757976)
chr5 (206-318)||(8523752-8523864)
chr5 (130-318)||(1009182-1009371)
chr5 (206-318)||(32759054-32759166)
chr5 (143-327)||(22308742-22308926)
chr5 (108-318)||(9169584-9169793)
chr5 (108-294)||(22047754-22047942)
chr5 (233-315)||(26047814-26047896)
chr5 (176-303)||(22049113-22049239)
chr5 (205-300)||(30857816-30857911)
chr5 (108-282)||(30859078-30859254)
chr5 (108-282)||(39603887-39604063)
chr5 (23-85)||(27262648-27262710)
chr5 (206-300)||(39605475-39605569)
chr5 (233-318)||(10978312-10978397)
chr5 (107-199)||(1102735-1102827)
chr5 (211-318)||(10977020-10977127)
chr5 (107-318)||(20539253-20539463)
chr5 (252-318)||(20538051-20538117)
chr5 (23-85)||(28393443-28393505)
chr5 (23-85)||(31171082-31171144)
chr5 (143-281)||(33173903-33174041)
chr5 (117-300)||(4127170-4127353)
chr5 (252-294)||(9170944-9170986)
chr5 (120-281)||(30910776-30910939)
chr5 (252-294)||(34899003-34899045)
chr5 (27-85)||(41874209-41874267)
chr5 (165-282)||(325151-325267)
chr5 (165-318)||(30912128-30912280)
chr5 (22-74)||(223465-223517)
chr5 (143-174)||(1009325-1009356)
chr5 (143-174)||(11262533-11262564)
chr5 (235-318)||(11796567-11796650)
chr5 (143-182)||(22308736-22308775)
chr5 (248-318)||(23325910-23325980)
chr5 (261-318)||(23334028-23334085)
chr5 (108-181)||(27705223-27705296)
chr5 (145-174)||(30910885-30910914)
chr5 (251-295)||(11262277-11262321)
chr5 (233-281)||(22307543-22307591)
chr5 (143-179)||(33173900-33173936)
[»] chr2 (38 HSPs)
chr2 (107-318)||(35903506-35903716)
chr2 (165-318)||(34147134-34147287)
chr2 (107-318)||(34513460-34513671)
chr2 (107-314)||(34463970-34464177)
chr2 (165-290)||(2277434-2277559)
chr2 (206-318)||(34148366-34148478)
chr2 (108-315)||(34512815-34513020)
chr2 (30-99)||(30749155-30749224)
chr2 (206-318)||(2276279-2276391)
chr2 (168-315)||(7753494-7753640)
chr2 (28-217)||(30748578-30748766)
chr2 (248-318)||(35061269-35061339)
chr2 (206-316)||(33995948-33996057)
chr2 (117-282)||(43033116-43033280)
chr2 (237-318)||(35904780-35904861)
chr2 (235-295)||(30749328-30749388)
chr2 (108-295)||(34467527-34467714)
chr2 (180-294)||(37956971-37957084)
chr2 (168-300)||(11315949-11316080)
chr2 (120-318)||(18616924-18617124)
chr2 (120-318)||(29219383-29219583)
chr2 (120-318)||(29332682-29332882)
chr2 (168-303)||(32470544-32470678)
chr2 (235-318)||(35061351-35061433)
chr2 (23-85)||(2384312-2384374)
chr2 (179-300)||(11547675-11547795)
chr2 (251-318)||(9474103-9474170)
chr2 (27-85)||(36214999-36215057)
chr2 (233-300)||(17460717-17460784)
chr2 (165-280)||(28562775-28562889)
chr2 (23-85)||(40323163-40323225)
chr2 (233-318)||(9472622-9472707)
chr2 (128-282)||(43034398-43034553)
chr2 (167-290)||(28561394-28561518)
chr2 (261-295)||(16289798-16289832)
chr2 (107-181)||(42641767-42641841)
chr2 (233-282)||(7437794-7437843)
chr2 (179-303)||(17459266-17459389)
[»] chr8 (53 HSPs)
chr8 (120-318)||(38696306-38696504)
chr8 (120-318)||(42877617-42877813)
chr8 (180-318)||(45437462-45437600)
chr8 (108-315)||(14840807-14841014)
chr8 (182-318)||(41743597-41743733)
chr8 (206-318)||(38697012-38697124)
chr8 (243-318)||(42878859-42878934)
chr8 (165-320)||(45394963-45395118)
chr8 (107-280)||(8571523-8571697)
chr8 (107-282)||(32798438-32798614)
chr8 (168-294)||(17702241-17702369)
chr8 (176-318)||(28734986-28735130)
chr8 (108-198)||(32695181-32695274)
chr8 (50-290)||(42872041-42872279)
chr8 (23-85)||(416395-416457)
chr8 (23-85)||(1659129-1659191)
chr8 (23-85)||(6337076-6337138)
chr8 (23-85)||(14030548-14030610)
chr8 (165-295)||(26697798-26697927)
chr8 (23-85)||(36803099-36803161)
chr8 (23-154)||(37400942-37401072)
chr8 (58-280)||(4810505-4810723)
chr8 (251-300)||(32693846-32693895)
chr8 (50-141)||(34504525-34504615)
chr8 (204-280)||(28420178-28420254)
chr8 (108-199)||(24192571-24192662)
chr8 (233-295)||(34504673-34504735)
chr8 (58-173)||(45281047-45281161)
chr8 (243-292)||(45396060-45396109)
chr8 (176-280)||(212688-212792)
chr8 (176-280)||(239462-239566)
chr8 (176-280)||(726311-726415)
chr8 (176-280)||(792817-792921)
chr8 (176-280)||(798812-798916)
chr8 (167-282)||(22551041-22551155)
chr8 (204-280)||(28418842-28418918)
chr8 (107-198)||(31845702-31845792)
chr8 (120-281)||(42098598-42098760)
chr8 (117-199)||(10669362-10669444)
chr8 (252-290)||(30787652-30787690)
chr8 (251-300)||(26696548-26696597)
chr8 (265-314)||(45396113-45396162)
chr8 (117-280)||(6397819-6397981)
chr8 (143-174)||(24192608-24192639)
chr8 (205-296)||(41742087-41742178)
chr8 (117-187)||(9854796-9854866)
chr8 (228-282)||(32797172-32797226)
chr8 (108-198)||(43202214-43202304)
chr8 (252-281)||(13117685-13117714)
chr8 (58-99)||(26696718-26696759)
chr8 (259-300)||(28291311-28291352)
chr8 (180-280)||(6398478-6398577)
chr8 (251-295)||(42870834-42870878)
[»] scaffold0013 (1 HSPs)
scaffold0013 (27-312)||(32576-32862)
[»] scaffold1251 (1 HSPs)
scaffold1251 (165-318)||(1050-1203)
[»] chr6 (20 HSPs)
chr6 (24-297)||(12669742-12670015)
chr6 (165-300)||(7310292-7310426)
chr6 (244-318)||(7308491-7308565)
chr6 (23-84)||(13847746-13847807)
chr6 (206-312)||(34093387-34093485)
chr6 (141-281)||(32506967-32507107)
chr6 (252-318)||(35037131-35037197)
chr6 (233-318)||(233597-233682)
chr6 (251-300)||(6452562-6452611)
chr6 (242-294)||(12780549-12780601)
chr6 (177-248)||(1367479-1367550)
chr6 (143-174)||(12669863-12669894)
chr6 (120-198)||(29381649-29381730)
chr6 (237-307)||(16208533-16208603)
chr6 (251-280)||(232212-232241)
chr6 (252-281)||(5187674-5187703)
chr6 (108-181)||(7311632-7311705)
chr6 (237-294)||(12784728-12784785)
chr6 (252-293)||(15730082-15730123)
chr6 (265-317)||(7308352-7308404)
[»] scaffold0118 (1 HSPs)
scaffold0118 (108-290)||(43481-43665)
[»] scaffold0128 (1 HSPs)
scaffold0128 (117-295)||(22009-22179)
[»] scaffold0201 (2 HSPs)
scaffold0201 (143-293)||(21150-21300)
scaffold0201 (143-179)||(21267-21303)
[»] scaffold0031 (2 HSPs)
scaffold0031 (107-282)||(124003-124176)
scaffold0031 (143-174)||(124108-124139)
[»] scaffold0078 (1 HSPs)
scaffold0078 (233-299)||(18829-18895)
[»] scaffold0035 (1 HSPs)
scaffold0035 (23-85)||(83045-83107)
[»] scaffold0019 (1 HSPs)
scaffold0019 (143-281)||(63074-63212)
[»] scaffold0620 (1 HSPs)
scaffold0620 (206-312)||(8721-8819)
[»] scaffold0077 (2 HSPs)
scaffold0077 (108-282)||(54091-54267)
scaffold0077 (206-300)||(52608-52702)
[»] scaffold0004 (1 HSPs)
scaffold0004 (247-316)||(334150-334220)
[»] scaffold0001 (1 HSPs)
scaffold0001 (247-316)||(44857-44927)
[»] scaffold0034 (1 HSPs)
scaffold0034 (251-295)||(108534-108578)


Alignment Details
Target: chr3 (Bit Score: 311; Significance: 1e-175; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 12 - 446
Target Start/End: Original strand, 28909420 - 28909849
Alignment:
Q  12 gagatgaaacaatgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaaccgtcctcttttaatnnnnnnngatca 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||    
T  28909420 gagatgaaacaatgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaaccgtcctcttttaataaaaaa-gatca 28909518  T
Q  112 aacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagattta 211  Q
    | || ||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    ||||||||||    
T  28909519 accagtttaaattaaaaaaattaataggatctatggtggaccaaccttaagagtggttcaccacagatatttggggttaaacttaagt--cagagattta 28909616  T
Q  212 tttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgaccta 311  Q
    ||||||| ||||||| |||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28909617 tttgaccaacggagacaaacgtgagggaccaaaacatgagttttattagttatgggaccaaaatgaaaactgaaaattaattagaggactgaatgaccta 28909716  T
Q  312 ttaagcccaactttttatttacattgtcaacaataaaccatagtctgcttgctttaaatcatttttctctcatctagcctgactagtttgcttctgcatc 411  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  28909717 ttaagtccaactttttatttacattgtcaacaataaaccatagtctgctagctttaaatcatttttctctcatctagccagactagtgtgcttctgcatc 28909816  T
Q  412 tgcactacagtactatgtgaattatgtaatcaccc 446  Q
    |||||| ||||||  ||||||||||||||||||||    
T  28909817 tgcactgcagtac--tgtgaattatgtaatcaccc 28909849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 117 - 315
Target Start/End: Original strand, 20288141 - 20288339
Alignment:
Q  117 tttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttga 216  Q
    ||||||||||||||||||||| | | |||||||||  | |  |||   |||||||||| |||||||||| |||||||||||||  ||| |||||||||||    
T  20288141 tttaaattaaataaattaataaggtctatggtggaatatctataatgttggtccaccatagacatttggagttaaacttaacagtcagggatttatttga 20288240  T
Q  217 ccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaa 315  Q
    |  || |||| |||| |||||||| || |||||||||||||||||||||||| ||||||||||||| |||||||||||| |||| ||||| ||||||||    
T  20288241 ctaacagagacaaacttgagggaccaacacatgagttttattaattatgggatcaaaatgaaaactaaaaattaattaggggaccaaatggcctattaa 20288339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 130 - 318
Target Start/End: Original strand, 3455554 - 3455743
Alignment:
Q  130 aattaataggatatatggtggaccaaccttaagagtggtccaccacagacattt---ggggttaaacttaacaaccagagatttatttgaccgacggaga 226  Q
    |||||||| ||| ||||||||||||  ||||||  |||||||||| | ||||||   ||||||||| |||||   ||| |||||||||||| ||||||||    
T  3455554 aattaatatgatctatggtggaccactcttaaggttggtccaccata-acattttggggggttaaagttaactgtcag-gatttatttgactgacggaga 3455651  T
Q  227 taaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
     |||| ||| |||| |||||||||||||||||| ||||| ||||||||||||||||  ||||||||| | |||| |||||||||||||||||    
T  3455652 caaacatgaaggaccaaaacatgagttttattagttatgagaccaaaatgaaaacttgaaattaattcggggaccaaatgacctattaagcc 3455743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 107 - 295
Target Start/End: Complemental strand, 42685085 - 42684897
Alignment:
Q  107 gatcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagag 206  Q
    ||||||||  ||||||||||| || |||||| | | ||||||||||||  ||||||  |||| ||||| ||||||||||||||||||||||||  ||  |    
T  42685085 gatcaaacggtttaaattaaaaaatttaataaggtttatggtggaccactcttaagcttggttcaccatagacatttggggttaaacttaacagtcaagg 42684986  T
Q  207 atttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattag 295  Q
    |||||||||    ||  ||| |||  |||||||| ||||| | ||||||||| ||||||| ||||||||||||||| ||||||| ||||    
T  42684985 atttatttggtaaacatagaaaaaaatgagggactaaaacgtcagttttattcattatggaaccaaaatgaaaacttaaaattatttag 42684897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 234 - 315
Target Start/End: Original strand, 9338470 - 9338551
Alignment:
Q  234 gagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaa 315  Q
    ||||||| ||||||||||||||||||||||||  || ||||| |||| ||||||||||| ||||||||||||||||||||||    
T  9338470 gagggaccaaaacatgagttttattaattatgaaactaaaattaaaattgaaaattaatcagaggactaaatgacctattaa 9338551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 108 - 300
Target Start/End: Complemental strand, 3208693 - 3208500
Alignment:
Q  108 atcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacaga--catttggggttaaacttaacaaccaga 205  Q
    |||||||  ||||||||| |  |||||||||||| ||||||||||||  ||||||  |||||||||| |    ||||||||||||||||||||    ||     
T  3208693 atcaaacggtttaaattataataattaataggatttatggtggaccactcttaaggttggtccaccataatatcatttggggttaaacttaacggtaag- 3208595  T
Q  206 gatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    ||||||||||||  ||||||  |||  | |||||  ||||| |  |||||||||||||||||||||||||||||| || ||||||||||||||||    
T  3208594 gatttatttgacaaacggaggaaaaaataagggatcaaaacgtacgttttattaattatgggaccaaaatgaaaaatggaaattaattagaggac 3208500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 170 - 300
Target Start/End: Complemental strand, 24403385 - 24403255
Alignment:
Q  170 caccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggac 269  Q
    ||||| |||||||| |||||||| ||||||| ||  |||||| |||||  |||||| | ||| |||||||| ||||||| | |||||||||||||| |||    
T  24403385 caccatagacatttagggttaaagttaacaaacatggatttacttgacaaacggaggtgaacttgagggaccaaaacataaattttattaattatgagac 24403286  T
Q  270 caaaatgaaaactgaaaattaattagaggac 300  Q
    || ||||||||||  ||||||||||| ||||    
T  24403285 cataatgaaaacttgaaattaattagtggac 24403255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 206 - 315
Target Start/End: Original strand, 43174712 - 43174821
Alignment:
Q  206 gatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaat 305  Q
    |||||||||||  |||||||||| |  |||||||| |||||||||||||||||| |||||||  ||||||||||||| |||||||| ||  |||| ||||    
T  43174712 gatttatttgattgacggagatagatttgagggaccaaaacatgagttttattagttatggggtcaaaatgaaaacttaaaattaaataagggaccaaat 43174811  T
Q  306 gacctattaa 315  Q
    ||| ||||||    
T  43174812 gacatattaa 43174821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 204 - 300
Target Start/End: Complemental strand, 37735418 - 37735322
Alignment:
Q  204 gagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    ||||||||||||||  ||| ||| |||  |||||||| |||||||  |||||||||||||||||||||||||||||||| ||||||| ||| |||||    
T  37735418 gagatttatttgacaaacgaagaaaaaaatgagggactaaaacatacgttttattaattatgggaccaaaatgaaaacttaaaattatttaaaggac 37735322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 18458637 - 18458760
Alignment:
Q  180 atttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaa 279  Q
    ||||| |||||||||||| ||||||||||||||||| |  ||||||  |||  |||||||| |||||   ||||||||||||| |||||||||||| |||    
T  18458637 atttgaggttaaacttaaaaaccagagatttatttggcaaacggaggaaaaagtgagggactaaaacgcaagttttattaattgtgggaccaaaataaaa 18458736  T
Q  280 actgaaaattaattagaggactaa 303  Q
    |||  |||||| |||| |||||||    
T  18458737 acttgaaattatttaggggactaa 18458760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 14745107 - 14745192
Alignment:
Q  107 gatcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaa 192  Q
    ||||||||| |||||||||||  |||||||||||| ||||||| ||||  ||||||  |||||||||||||| |||||||||||||    
T  14745107 gatcaaacagtttaaattaaaataattaataggatctatggtgaaccactcttaaggttggtccaccacagatatttggggttaaa 14745192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 37981498 - 37981560
Alignment:
Q  23 atgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaac 85  Q
    ||||||||||| | |||||||||||||||||| | |||||||||| |||||||||||||||||    
T  37981498 atgggatataatgctagatgttgttagttcacagcaagatacagtggacatgcatgatctaac 37981560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 44175858 - 44175796
Alignment:
Q  23 atgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaac 85  Q
    ||||||||||| | ||||||||||| |||||| |||||||||||| |||||||||||||||||    
T  44175858 atgggatataatgctagatgttgttggttcacagtaagatacagtggacatgcatgatctaac 44175796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 280
Target Start/End: Complemental strand, 53420526 - 53420352
Alignment:
Q  107 gatcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaaca-accaga 205  Q
    ||||||||| ||||||||||| |  |||||| | | ||||||||| ||   ||||   |||||||||| ||||||||| |||||||||||| | || ||     
T  53420526 gatcaaacagtttaaattaaaaagtttaataaggtctatggtggatcacttttaaagttggtccaccatagacatttgtggttaaacttaatagactagg 53420427  T
Q  206 gatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaa 280  Q
    |||||||||||   ||||||| |||  |||||||| ||||| |  |||||||||||| | |||||||||||||||    
T  53420426 gatttatttgataaacggagaaaaaagtgagggaccaaaacgtacgttttattaattgtaggaccaaaatgaaaa 53420352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 300
Target Start/End: Complemental strand, 18442399 - 18442268
Alignment:
Q  165 tggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattat 264  Q
    |||||||||| ||||||||||||||||||||||||||  || ||||||||| |    ||| | ||   ||| |||| ||||| || |||||||||||| |    
T  18442399 tggtccaccatagacatttggggttaaacttaacaacatga-atttatttggcaagaggaaaaaa---tgatggactaaaacgtgggttttattaattgt 18442304  T
Q  265 gggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    ||||||||||||||||||  |||||| |||||||||    
T  18442303 gggaccaaaatgaaaacttgaaattatttagaggac 18442268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 300
Target Start/End: Complemental strand, 19487473 - 19487342
Alignment:
Q  165 tggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattat 264  Q
    |||||||||| ||||||||||||||||||||||||||  || ||||||||| |    ||| | ||   ||| |||| ||||| || |||||||||||| |    
T  19487473 tggtccaccatagacatttggggttaaacttaacaacatga-atttatttggcaagaggaaaaaa---tgatggactaaaacgtgggttttattaattgt 19487378  T
Q  265 gggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    ||||||||||||||||||  |||||| |||||||||    
T  19487377 gggaccaaaatgaaaacttgaaattatttagaggac 19487342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 265 - 318
Target Start/End: Original strand, 20336693 - 20336746
Alignment:
Q  265 gggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  20336693 gggaccaaaatgaaaactgaaaattaattaggggaccaaatgacctagtaagcc 20336746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 233 - 318
Target Start/End: Complemental strand, 43173969 - 43173884
Alignment:
Q  233 tgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    ||||| || ||||||||| |||||||| |||||||  ||||||||||| || ||||||||||| |||  |||||||||||||||||    
T  43173969 tgaggaaccaaaacatgaattttattagttatggggacaaaatgaaaattggaaattaattaggggatcaaatgacctattaagcc 43173884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 232 - 300
Target Start/End: Complemental strand, 34818170 - 34818102
Alignment:
Q  232 ctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    ||||||||| ||| |||  |||||||||||| |||||||||||||||||||  ||||||||||||||||    
T  34818170 ctgagggaccaaatcatacgttttattaattgtgggaccaaaatgaaaacttgaaattaattagaggac 34818102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 3807816 - 3807878
Alignment:
Q  23 atgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaac 85  Q
    ||||||||||| | ||||||||||| |||||| |||||||||| | |||||||||||||||||    
T  3807816 atgggatataatgctagatgttgttggttcacagtaagatacaatggacatgcatgatctaac 3807878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 233 - 295
Target Start/End: Original strand, 55328338 - 55328400
Alignment:
Q  233 tgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattag 295  Q
    |||||||| ||||||||| |||||||||||||| || |||||||||||||  |||||||||||    
T  55328338 tgagggactaaaacatgaattttattaattatgagatcaaaatgaaaacttgaaattaattag 55328400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 33705479 - 33705418
Alignment:
Q  23 atgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaa 84  Q
    ||||||||||| | ||||||||||| |||||  |||||||||||| ||||||||||||||||    
T  33705479 atgggatataatgctagatgttgttggttcatagtaagatacagtggacatgcatgatctaa 33705418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 308
Target Start/End: Complemental strand, 5122369 - 5122309
Alignment:
Q  248 tgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgac 308  Q
    ||||||||||||||||||| | ||||||||||| || ||||||||| |||||| |||||||    
T  5122369 tgagttttattaattatggaagcaaaatgaaaaatggaaattaattggaggaccaaatgac 5122309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 245
Target Start/End: Original strand, 20336574 - 20336702
Alignment:
Q  117 tttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttga 216  Q
    ||||||||||||||||||||| | | |||||||||| | |  |||   ||||||| || |||||||||| |||||||||||||  ||   ||||||||||    
T  20336574 tttaaattaaataaattaataaggtctatggtggactatctataatgttggtccaacatagacatttggagttaaacttaacagtcatgaatttatttga 20336673  T
Q  217 ccgacggagataaacctgagggacaaaaa 245  Q
    |  ||||||| |||| |||||||| ||||    
T  20336674 ctaacggagacaaacttgagggaccaaaa 20336702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 280
Target Start/End: Complemental strand, 50809533 - 50809457
Alignment:
Q  204 gagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaa 280  Q
    |||||||||||| |  ||||||  |||  |||||||| ||||| || ||||||||||||||||||||||||||||||    
T  50809533 gagatttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaa 50809457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 50810838 - 50810914
Alignment:
Q  204 gagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaa 280  Q
    |||||||||||| |  ||||||  |||  |||||||| ||||| || ||||||||||||||||||||||||||||||    
T  50810838 gagatttatttggcaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaa 50810914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 280
Target Start/End: Complemental strand, 50865026 - 50864950
Alignment:
Q  204 gagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaa 280  Q
    |||||||||||| |  ||||||  |||  |||||||| ||||| || ||||||||||||||||||||||||||||||    
T  50865026 gagatttatttggcaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaa 50864950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 50866329 - 50866405
Alignment:
Q  204 gagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaa 280  Q
    |||||||||||| |  ||||||  |||  |||||||| ||||| || ||||||||||||||||||||||||||||||    
T  50866329 gagatttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaa 50866405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 167 - 282
Target Start/End: Original strand, 53194837 - 53194952
Alignment:
Q  167 gtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgg 266  Q
    |||||||| |||||||| | |||||||||||||  ||  |||||||||| |  |  |||  |||  |||||||| ||||| |  ||||||||||||||||    
T  53194837 gtccaccatagacattttgagttaaacttaacagacatggatttatttggcaaatagaggaaaaagtgagggaccaaaacgtacgttttattaattatgg 53194936  T
Q  267 gaccaaaatgaaaact 282  Q
    ||||||||||||||||    
T  53194937 gaccaaaatgaaaact 53194952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 199
Target Start/End: Complemental strand, 36175461 - 36175379
Alignment:
Q  117 tttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaaca 199  Q
    ||||||||||| |||||||||||||||||||||||| |    |||   || |||| || ||||||||||||||||||||||||    
T  36175461 tttaaattaaagaaattaataggatatatggtggactatatataatgttgatccatcatagacatttggggttaaacttaaca 36175379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 108 - 197
Target Start/End: Complemental strand, 10301142 - 10301053
Alignment:
Q  108 atcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaa 197  Q
    |||||||| |||||||||||  |||||||||||| ||||||||| ||  ||||||  |||| ||||| ||| ||||| ||||||| ||||    
T  10301142 atcaaacagtttaaattaaaataattaataggatctatggtggatcactcttaaggttggttcaccatagatatttgaggttaaagttaa 10301053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 265 - 318
Target Start/End: Original strand, 20314800 - 20314853
Alignment:
Q  265 gggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    ||||||||||||||| ||||||||||||||| |||  |||||| ||||||||||    
T  20314800 gggaccaaaatgaaagctgaaaattaattaggggatcaaatgatctattaagcc 20314853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 281
Target Start/End: Original strand, 10732048 - 10732210
Alignment:
Q  120 aaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacat--ttggggttaaacttaacaaccagagatttatttgac 217  Q
    ||||||||  |||||||||||| |||||||||||   || |||  |||||||||| ||||||  || ||||||||||||||   | || |||||||||      
T  10732048 aaattaaaataattaataggatctatggtggaccgctctaaaggttggtccaccatagacatcatttgggttaaacttaaccgtcgga-atttatttggt 10732146  T
Q  218 cgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaac 281  Q
      ||||||  |||  |||||||| |||||   | ||||||||||||||||||||||||||||||    
T  10732147 aaacggaggaaaatgtgagggactaaaacgccatttttattaattatgggaccaaaatgaaaac 10732210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 174
Target Start/End: Original strand, 3208625 - 3208656
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccacca 174  Q
    ||||||||||||||||||||||||||||||||    
T  3208625 tatggtggaccaaccttaagagtggtccacca 3208656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 174
Target Start/End: Complemental strand, 3455600 - 3455569
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccacca 174  Q
    ||||||||||||||||||||||||||||||||    
T  3455600 tatggtggaccaaccttaagagtggtccacca 3455569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 294
Target Start/End: Original strand, 23443508 - 23443551
Alignment:
Q  251 gttttattaattatgggaccaaaatgaaaactgaaaattaatta 294  Q
    |||||||||||| ||||||||||||||||| | |||||||||||    
T  23443508 gttttattaattttgggaccaaaatgaaaagttaaaattaatta 23443551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 166
Target Start/End: Original strand, 24487226 - 24487284
Alignment:
Q  107 gatcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtg 166  Q
    ||||| ||||||||||||||| ||||||||||||| |||||| |||||| ||||| ||||    
T  24487226 gatcatacaatttaaattaaa-aaattaataggatctatggttgaccaatcttaaaagtg 24487284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 174
Target Start/End: Complemental strand, 27841685 - 27841654
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccacca 174  Q
    ||||||||||||||||||||||||||||||||    
T  27841685 tatggtggaccaaccttaagagtggtccacca 27841654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 174
Target Start/End: Original strand, 35371048 - 35371079
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccacca 174  Q
    ||||||||||||||||||||||||||||||||    
T  35371048 tatggtggaccaaccttaagagtggtccacca 35371079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 280
Target Start/End: Complemental strand, 38241056 - 38240942
Alignment:
Q  165 tggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattat 264  Q
    |||| ||||| |||||||||| ||||||||||||| || | |||||||||| |  ||||||  ||| |||| ||||  |||| |  |||||||||||| |    
T  38241056 tggttcaccatagacatttggagttaaacttaacagcc-gggatttatttggcaaacggaggaaaatctgaaggacttaaacgtacgttttattaattgt 38240958  T
Q  265 gggaccaaaatgaaaa 280  Q
    ||||||||||| ||||    
T  38240957 gggaccaaaataaaaa 38240942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 174
Target Start/End: Complemental strand, 38242491 - 38242460
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccacca 174  Q
    ||||||||||||||||||||||||||||||||    
T  38242491 tatggtggaccaaccttaagagtggtccacca 38242460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 134 - 216
Target Start/End: Original strand, 11224776 - 11224858
Alignment:
Q  134 aataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttga 216  Q
    |||| ||| ||||||||||||  ||||||  ||||||||||   ||||||||| ||||| |||| |||||||| |||||||||    
T  11224776 aatatgatctatggtggaccactcttaaggttggtccaccatgaacatttgggattaaagttaataaccagaggtttatttga 11224858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 174
Target Start/End: Complemental strand, 11224817 - 11224787
Alignment:
Q  144 atggtggaccaaccttaagagtggtccacca 174  Q
    |||||||||||||||||||||||||||||||    
T  11224817 atggtggaccaaccttaagagtggtccacca 11224787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 12107795 - 12107879
Alignment:
Q  13 agatgaaacaatgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaaccgtcctcttttaat 99  Q
    |||||||| |||||||||||| ||||||||| | | ||||||  ||||||| ||||||| ||||||||||||  |||||| ||||||    
T  12107795 agatgaaa-aatgggatataatgttagatgtcgatggttcacaataagata-agtagacctgcatgatctaatggtcctcctttaat 12107879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 34819194 - 34819286
Alignment:
Q  110 caaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacaga---catttggggttaaacttaaca 199  Q
    |||||| |||||||||||  || ||||||||| ||||||||||||  ||||||  || ||||| | |||   |||||||||||||||||||||    
T  34819194 caaacagtttaaattaaaataagtaataggatctatggtggaccactcttaaggttgatccactatagacatcatttggggttaaacttaaca 34819286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 165 - 295
Target Start/End: Complemental strand, 40364470 - 40364340
Alignment:
Q  165 tggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattat 264  Q
    |||| ||||| ||||||||  |||||||||||||| | |  |||||||||| |  ||||||| |||  ||||||||  |||| |   ||||||||||| |    
T  40364470 tggttcaccatagacattttaggttaaacttaacaccgaaggatttatttggcaaacggagaaaaaaatgagggacttaaacgtacattttattaatttt 40364371  T
Q  265 gggaccaaaatgaaaactgaaaattaattag 295  Q
     |||||||||||||||||  |||||| ||||    
T  40364370 aggaccaaaatgaaaacttgaaattatttag 40364340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 281
Target Start/End: Complemental strand, 10730949 - 10730920
Alignment:
Q  252 ttttattaattatgggaccaaaatgaaaac 281  Q
    ||||||||||||||||||||||||||||||    
T  10730949 ttttattaattatgggaccaaaatgaaaac 10730920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 38242423 - 38242496
Alignment:
Q  108 atcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacat 181  Q
    |||||||  |||||||||||  ||||||||| || ||||||||||||  ||||||  |||||||||| ||||||    
T  38242423 atcaaacggtttaaattaaaataattaatagaatttatggtggaccactcttaaggttggtccaccatagacat 38242496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 198
Target Start/End: Complemental strand, 48083426 - 48083345
Alignment:
Q  117 tttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaac 198  Q
    |||||||||||  |||||||||||| |||||| |||||  ||||||  | || ||||| ||||||||| ||||||| |||||    
T  48083426 tttaaattaaaataattaataggatctatggtagaccactcttaaggttagtgcaccatagacatttgtggttaaagttaac 48083345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 281
Target Start/End: Complemental strand, 53612935 - 53612906
Alignment:
Q  252 ttttattaattatgggaccaaaatgaaaac 281  Q
    ||||||||||||||||||||||||||||||    
T  53612935 ttttattaattatgggaccaaaatgaaaac 53612906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 216
Target Start/End: Complemental strand, 10338946 - 10338838
Alignment:
Q  108 atcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagaga 207  Q
    |||||||| || ||||||||  |||||||||||| ||||||||||||  ||||||  |||| ||  | |||||| || ||||||| ||||||  ||||||    
T  10338946 atcaaacagttaaaattaaaataattaataggatctatggtggaccactcttaaggttggttcattatagacatctgaggttaaagttaacaggcagaga 10338847  T
Q  208 tttatttga 216  Q
     || |||||    
T  10338846 cttttttga 10338838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 179
Target Start/End: Complemental strand, 12107954 - 12107918
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccaccacagac 179  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  12107954 tatggtggaccaaccttaaaagtggtccaccatagac 12107918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 36176540 - 36176588
Alignment:
Q  233 tgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaac 281  Q
    |||||||| |||||||   ||||||||||| ||||||||||||||||||    
T  36176540 tgagggaccaaaacatacattttattaattgtgggaccaaaatgaaaac 36176588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 54110192 - 54110239
Alignment:
Q  108 atcaaacaatttaaattaaataaattaataggatatatggtggaccaac 156  Q
    ||||||| |||||||||||| ||||||||||||| |||||||| |||||    
T  54110192 atcaaacgatttaaattaaa-aaattaataggatctatggtggtccaac 54110239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2071 (Bit Score: 108; Significance: 5e-54; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 107 - 318
Target Start/End: Original strand, 588 - 799
Alignment:
Q  107 gatcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagag 206  Q
    ||||||||  ||||||||||| || |||||| | | ||||||||||||  ||||||  |||||||  | | ||||||| |||||||||| |||| ||| |    
T  588 gatcaaacggtttaaattaaaaaatttaataaggtctatggtggaccactcttaaggttggtccattatatacatttgaggttaaacttgacaatcaggg 687  T
Q  207 atttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatg 306  Q
    ||||||||||||||| |||| |||| |||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||    
T  688 atttatttgaccgacagagacaaacttgagggaccaaaacatgagttttattagttatgggaccaaaatgaaaactggaaattaattagaggaccaaatg 787  T
Q  307 acctattaagcc 318  Q
    ||||||||||||    
T  788 acctattaagcc 799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 2e-53; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 15 - 290
Target Start/End: Complemental strand, 46201431 - 46201157
Alignment:
Q  15 atgaaacaatgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaaccgtcctcttttaatnnnnnnngatcaaac 114  Q
    |||||||||||||| | ||||||||||||| || |||||||||||||||| |||||||||||||||||||| || ||||||||||       | ||||||    
T  46201431 atgaaacaatgggagacaaagttagatgtttttggttcaccgtaagatacggtagacatgcatgatctaacggtactcttttaataaaaaagg-tcaaac 46201333  T
Q  115 aatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttattt 214  Q
    | |||| ||||||  |||||||| ||| ||||||||||||  ||||||  |||| ||||| ||||||||||||||||||||||||  |   |||||||||    
T  46201332 agtttatattaaaataattaatatgatctatggtggaccactcttaaggttggttcaccatagacatttggggttaaacttaacaggcttggatttattt 46201233  T
Q  215 gaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaatta 290  Q
    | |||||||| | | |  | | |||  |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  46201232 ggccgacggaaacacaattaaaggatcaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaatta 46201157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 179 - 319
Target Start/End: Complemental strand, 25533325 - 25533185
Alignment:
Q  179 catttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaa 278  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||| |  ||| |||| ||||||||| |||||||| ||||||||||||||||||    
T  25533325 catttggggttaaacttaacagtcagagatttatttgaccgacggagatacaattgaaggaccaaaacatgaattttattagttatgggaccaaaatgaa 25533226  T
Q  279 aactgaaaattaattagaggactaaatgacctattaagccc 319  Q
    ||||  ||||||||||   ||| ||||||| ||||||||||    
T  25533225 aacttgaaattaattaagagaccaaatgacttattaagccc 25533185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 165 - 318
Target Start/End: Original strand, 9662202 - 9662354
Alignment:
Q  165 tggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattat 264  Q
    |||||||||| |||||||||  |||||| ||||||  | | ||||||||||||||||||||| |||| |||||||| |||||||||||||| ||| ||||    
T  9662202 tggtccaccatagacatttgaagttaaatttaacagtctg-gatttatttgaccgacggagacaaacgtgagggaccaaaacatgagtttttttagttat 9662300  T
Q  265 gggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    || || || |||||||||  |||||||||||||||| |||||||||||||||||    
T  9662301 ggaactaagatgaaaacttgaaattaattagaggaccaaatgacctattaagcc 9662354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 207 - 318
Target Start/End: Complemental strand, 38539780 - 38539669
Alignment:
Q  207 atttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatg 306  Q
    |||| ||||||||||||||| | |  | |||||| |||||||||||||||||| ||||||||||||||||||||||  ||||||||||  |||  |||||    
T  38539780 atttttttgaccgacggagagacaattaagggaccaaaacatgagttttattatttatgggaccaaaatgaaaacttgaaattaattaagggatcaaatg 38539681  T
Q  307 acctattaagcc 318  Q
    ||||||||||||    
T  38539680 acctattaagcc 38539669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 198
Target Start/End: Original strand, 669212 - 669386
Alignment:
Q  22 aatgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaaccgtcctcttttaatnnnnnnngatcaaacaatttaa 121  Q
    |||| ||||| ||||||| |||||||  ||||  |||||||||| || |||||||||||||||| ||  ||||||| |       ||||||||  |||||    
T  669212 aatgagatatgaagttagttgttgttgattcattgtaagatacaataaacatgcatgatctaacagttatctttta-ttaaaaaagatcaaacggtttaa 669310  T
Q  122 attaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaac 198  Q
    |||||  ||||||||||||| ||||||||||||  ||||||| |||||||||| ||||||||| ||||||| |||||    
T  669311 attaacaaaattaataggatctatggtggaccactcttaaga-tggtccaccatagacatttgaggttaaagttaac 669386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 120 - 318
Target Start/End: Original strand, 13564158 - 13564357
Alignment:
Q  120 aaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatt---tggggttaaacttaacaaccagagatttatttga 216  Q
    ||||||||  |||||||||||| ||||||||||||  ||||||  || ||||||| |||||||   ||||||||||||||||  |  | ||||||||||     
T  13564158 aaattaaaataattaataggatctatggtggaccactcttaaggatgatccaccatagacattatttggggttaaacttaacgtc--gggatttatttgg 13564255  T
Q  217 ccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaag 316  Q
    |  ||||||  |||  |||||||| |||||   ||||||||||||| ||||||||||||||||||   ||||||| ||  ||||||||||| ||| ||||    
T  13564256 caaacggaggaaaatgtgagggactaaaacgccagttttattaattgtgggaccaaaatgaaaacaagaaattaaataagggactaaatgatctaataag 13564355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 165 - 303
Target Start/End: Original strand, 33779052 - 33779187
Alignment:
Q  165 tggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattat 264  Q
    |||||||||| ||||||||| |||||||||||||| ||| ||||||||| |   | |||||  |||   ||||||| ||||| ||||||||||||||| |    
T  33779052 tggtccaccatagacatttgtggttaaacttaacagccaaagatttattgg---ggcggaggaaaaagcgagggactaaaacgtgagttttattaattgt 33779148  T
Q  265 gggaccaaaatgaaaactgaaaattaattagaggactaa 303  Q
    ||| ||||||||||||||  |||||| |||| |||||||    
T  33779149 ggggccaaaatgaaaacttgaaattatttaggggactaa 33779187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 117 - 302
Target Start/End: Complemental strand, 11344703 - 11344521
Alignment:
Q  117 tttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttga 216  Q
    ||||||||||| ||||||||||| ||||||||| || | |  |||   ||| |||||| ||| ||||| |||||||||||||| | | ||||||||||||    
T  11344703 tttaaattaaagaaattaatagggtatatggtgcactatctataatgttggaccaccatagatatttgaggttaaacttaacaccgaaagatttatttga 11344604  T
Q  217 ccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggacta 302  Q
    |  ||||||| ||   ||| ||||  |||| |  |||||||||||| |||||||||||||||||||  |||||| | |||||||||    
T  11344603 caaacggagaaaa---tgaaggacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattattcagaggacta 11344521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 35295908 - 35295817
Alignment:
Q  107 gatcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaac 198  Q
    ||||||||  |||||||||||  |||||||||||| ||||||||||||  ||||||  |||||||||||||| ||||||||||||| |||||    
T  35295908 gatcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccacagatatttggggttaaagttaac 35295817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 168 - 303
Target Start/End: Complemental strand, 43459602 - 43459468
Alignment:
Q  168 tccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatggg 267  Q
    ||||||| |||||||||| ||||||||||||| || |||||||||||| |  ||||||  |||| ||||||||  ||||    |||||||||||| ||||    
T  43459602 tccaccatagacatttggagttaaacttaacagcc-gagatttatttggcaaacggaggaaaacatgagggacttaaacgcacgttttattaattgtggg 43459504  T
Q  268 accaaaatgaaaactgaaaattaattagaggactaa 303  Q
    |||||||||||||||  |||||| |||| |||||||    
T  43459503 accaaaatgaaaacttgaaattatttaggggactaa 43459468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 143 - 295
Target Start/End: Original strand, 47060419 - 47060570
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaa 242  Q
    |||||||||| |  ||||||  |||||||||| | |||||||| |||||||||||||  | | |||||||||| |  ||||| | ||   |||||||| |    
T  47060419 tatggtggactattcttaaggttggtccaccatatacatttggtgttaaacttaacagtccg-gatttatttggcaaacggaaaaaagggtgagggacca 47060517  T
Q  243 aaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattag 295  Q
    |||| |  |||||||||||||| ||||||||||||||||| ||||||||||||    
T  47060518 aaacgtacgttttattaattataggaccaaaatgaaaacttaaaattaattag 47060570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 327
Target Start/End: Complemental strand, 27833 - 27743
Alignment:
Q  237 ggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcccaacttttt 327  Q
    |||| ||||||||| ||||||||  ||||| ||||||||||||| || |||||| |||  |||| ||||||||||||||||| ||||||||    
T  27833 ggaccaaaacatgacttttattagatatggaaccaaaatgaaaattggaaattatttaagggaccaaatgacctattaagcctaacttttt 27743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 5095358 - 5095296
Alignment:
Q  23 atgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaac 85  Q
    ||||||||||| | ||||||||||| |||||| |||||||||||| |||||||||||||||||    
T  5095358 atgggatataatgctagatgttgttggttcacagtaagatacagtggacatgcatgatctaac 5095296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 24051495 - 24051433
Alignment:
Q  23 atgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaac 85  Q
    ||||||||||| | ||||||||||| |||||| |||||||||||| |||||||||||||||||    
T  24051495 atgggatataatgctagatgttgttggttcacagtaagatacagtggacatgcatgatctaac 24051433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 39752440 - 39752378
Alignment:
Q  23 atgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaac 85  Q
    ||||||||||| | ||||||||||| |||||| |||||||||||| |||||||||||||||||    
T  39752440 atgggatataatgctagatgttgttggttcacagtaagatacagtggacatgcatgatctaac 39752378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 318
Target Start/End: Original strand, 35130 - 35211
Alignment:
Q  237 ggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    |||| ||||||||| ||||||||  ||||||||||||||||||| || |||||| |||  |||| |||||||||||||||||    
T  35130 ggaccaaaacatgacttttattagatatgggaccaaaatgaaaattggaaattatttaagggaccaaatgacctattaagcc 35211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 282
Target Start/End: Original strand, 22115107 - 22115246
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaa 242  Q
    ||||||||||||  ||||||  |||||||| | |||||||||||||||||||||||| | |  ||||||||||    ||||||  |||  ||||| ||      
T  22115107 tatggtggaccactcttaaggttggtccactatagacatttggggttaaacttaacaccgaangatttatttggtnaacggaggaaaaagtgaggaactt 22115206  T
Q  243 aaacatgagttttattaattatgggaccaaaatgaaaact 282  Q
    |||| |  |||||||||||| |||||||||||||||||||    
T  22115207 aaacgtacgttttattaattgtgggaccaaaatgaaaact 22115246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 300
Target Start/End: Complemental strand, 40508551 - 40508394
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaa 242  Q
    |||||||||| |  ||||||| || ||||||| ||||||||||| |||||||||||| | |  |||||||||| |  ||||||  |||  ||||||||      
T  40508551 tatggtggacaactcttaagattgatccaccatagacatttgggattaaacttaacaccgaaggatttatttggctaacggaggaaaaagtgagggactt 40508452  T
Q  243 aaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    |||| |  |||||||||||| |||||| ||||||||||||  |||||| |||| ||||    
T  40508451 aaacgtacgttttattaattgtgggacaaaaatgaaaacttgaaattatttaggggac 40508394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 300
Target Start/End: Original strand, 40509677 - 40509834
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaa 242  Q
    ||||||||||||  ||||||  |||||||| | |||||||||||||||||||||||| | |  ||||||||||    ||||||  |||  ||||| ||      
T  40509677 tatggtggaccactcttaaggttggtccactatagacatttggggttaaacttaacaccgaatgatttatttggtaaacggaggaaaaagtgaggaactt 40509776  T
Q  243 aaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    |||| |  |||||||||||| |||||||||||||||||||  |||||| |||| ||||    
T  40509777 aaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggac 40509834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 206 - 318
Target Start/End: Original strand, 46202289 - 46202401
Alignment:
Q  206 gatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaat 305  Q
    ||||||||||||||||||||| | |  | |  ||| | |||||||||||||||| |||||||| |||||||||||||| |||||| |||  |||  |||     
T  46202289 gatttatttgaccgacggagacacaattaaatgaccagaacatgagttttattacttatgggatcaaaatgaaaactgtaaattatttaagggatcaaac 46202388  T
Q  306 gacctattaagcc 318  Q
    |||||||||||||    
T  46202389 gacctattaagcc 46202401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 206 - 300
Target Start/End: Complemental strand, 30333395 - 30333301
Alignment:
Q  206 gatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    ||||||||||||  ||||||| |||  |||||||| |||| ||  |||||||||||| |||||||||||||||||||  |||||| |||| ||||    
T  30333395 gatttatttgacaaacggagaaaaaaatgagggaccaaaagatacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggac 30333301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 117 - 198
Target Start/End: Complemental strand, 46835875 - 46835791
Alignment:
Q  117 tttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacaga---catttggggttaaacttaac 198  Q
    |||||||||||  ||||||||||||||||||| ||||||| |||||| || ||||||| | |   ||||||||||||||||||||    
T  46835875 tttaaattaaaataattaataggatatatggtagaccaactttaagaatgatccaccataaacatcatttggggttaaacttaac 46835791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 198
Target Start/End: Complemental strand, 43441554 - 43441464
Alignment:
Q  108 atcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaac 198  Q
    |||||||| |||| ||||||  |||||||||||  ||||||||||||  ||||||  |||| ||||| |||||||| |||||||| |||||    
T  43441554 atcaaacagtttacattaaaataattaataggacttatggtggaccactcttaaggttggtacaccatagacatttagggttaaagttaac 43441464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 117 - 198
Target Start/End: Complemental strand, 2414944 - 2414863
Alignment:
Q  117 tttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaac 198  Q
    ||||||||||  ||||||||||||| ||||||||||||   |||||  |||||||  | ||||||||||||||||| |||||    
T  2414944 tttaaattaagaaaattaataggatctatggtggaccacttttaaggttggtccattatagacatttggggttaaagttaac 2414863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 120 - 280
Target Start/End: Complemental strand, 32255187 - 32255025
Alignment:
Q  120 aaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacaga---catttggggttaaacttaacaaccagagatttatttga 216  Q
    ||||||||  |||||||||||| ||||||||||||  ||||||  |||||||||| | |   ||||||||||||||||||||   | | ||||||||||     
T  32255187 aaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccataaacatcatttggggttaaacttaaccgtc-gggatttatttgg 32255089  T
Q  217 ccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaa 280  Q
    |  ||||||  |||  |||||||  ||||  |  ||||||||||||||||||||||||| ||||    
T  32255088 caaacggaggaaaaagtgagggatcaaaatgtacgttttattaattatgggaccaaaataaaaa 32255025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 48312248 - 48312200
Alignment:
Q  107 gatcaaacaatttaaattaaataaattaataggatatatggtggaccaac 156  Q
    |||||||| |||||||||||| ||||||||||||| ||||||||||||||    
T  48312248 gatcaaaccatttaaattaaa-aaattaataggatctatggtggaccaac 48312200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 304
Target Start/End: Original strand, 3414886 - 3414938
Alignment:
Q  252 ttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaa 304  Q
    ||||||||||||||||||||||||||||||   |||||| |||| ||||||||    
T  3414886 ttttattaattatgggaccaaaatgaaaacatgaaattatttaggggactaaa 3414938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 282
Target Start/End: Original strand, 43460739 - 43460905
Alignment:
Q  117 tttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacat--ttggggttaaacttaacaaccagagatttattt 214  Q
    |||||||||||  |||||||||||| ||||||||||||  |||||   |||||||||| ||||||  || | ||||||||||||    || |||||||||    
T  43460739 tttaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatagacataatttgagttaaacttaactgtgag-gatttattt 43460837  T
Q  215 gaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaact 282  Q
    | |  | ||||  |||  |||||||| ||||  |  |||||||||||| |||||||||||||||||||    
T  43460838 ggcaaatggaggaaaaagtgagggactaaaatgtacgttttattaattgtgggaccaaaatgaaaact 43460905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 300
Target Start/End: Complemental strand, 47059172 - 47059124
Alignment:
Q  252 ttttattaattatgggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    ||||||||||| | ||||||||||||||||| |||||||||||| ||||    
T  47059172 ttttattaattgtaggaccaaaatgaaaacttaaaattaattaggggac 47059124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 174
Target Start/End: Original strand, 32255131 - 32255162
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccacca 174  Q
    ||||||||||||||||||||||||||||||||    
T  32255131 tatggtggaccaaccttaagagtggtccacca 32255162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 174
Target Start/End: Original strand, 40811461 - 40811492
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccacca 174  Q
    ||||||||||||||||||||||||||||||||    
T  40811461 tatggtggaccaaccttaagagtggtccacca 40811492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 45454121 - 45454054
Alignment:
Q  233 tgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    |||||||| ||||| |  ||||||||||||||| |||||||||||||||   ||||||||||| ||||    
T  45454121 tgagggactaaaacgtatgttttattaattatgagaccaaaatgaaaacgtgaaattaattaggggac 45454054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 294
Target Start/End: Original strand, 45455352 - 45455466
Alignment:
Q  179 catttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaa 278  Q
    ||||| ||||||||||||||| |||  |||||||||| |  ||||||| |||  |||||||  ||||  |  |||||||||||| |||||||||||||||    
T  45455352 catttagggttaaacttaacagccat-gatttatttggcaaacggagaaaaaagtgagggatcaaaatgtacgttttattaattgtgggaccaaaatgaa 45455450  T
Q  279 aactgaaaattaatta 294  Q
    || |  ||||||||||    
T  45455451 aatttgaaattaatta 45455466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 252 - 282
Target Start/End: Original strand, 32256447 - 32256477
Alignment:
Q  252 ttttattaattatgggaccaaaatgaaaact 282  Q
    |||||||||||||||||||||||||||||||    
T  32256447 ttttattaattatgggaccaaaatgaaaact 32256477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 32603045 - 32602967
Alignment:
Q  204 gagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaact 282  Q
    |||||||||||| |  ||||||  |||  |||||||| ||||| |  ||||||||||||||||||||||||| ||||||    
T  32603045 gagatttatttggcaaacggagtaaaaagtgagggactaaaacgtacgttttattaattatgggaccaaaataaaaact 32602967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 40811530 - 40811456
Alignment:
Q  107 gatcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacat 181  Q
    ||||||||  ||||||||||| | |||||||| || ||||||||||||  ||||||  |||||||||| ||||||    
T  40811530 gatcaaacggtttaaattaaaaatattaatagaatctatggtggaccactcttaaggttggtccaccatagacat 40811456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 300
Target Start/End: Original strand, 669447 - 669488
Alignment:
Q  259 aattatgggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    |||||||||||||||||||||||||| ||||| |||| ||||    
T  669447 aattatgggaccaaaatgaaaactgataattacttaggggac 669488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 294
Target Start/End: Original strand, 10942313 - 10942346
Alignment:
Q  261 ttatgggaccaaaatgaaaactgaaaattaatta 294  Q
    |||||||| |||||||||||||||||||||||||    
T  10942313 ttatgggatcaaaatgaaaactgaaaattaatta 10942346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 174
Target Start/End: Original strand, 35295841 - 35295870
Alignment:
Q  145 tggtggaccaaccttaagagtggtccacca 174  Q
    ||||||||||||||||||||||||||||||    
T  35295841 tggtggaccaaccttaagagtggtccacca 35295870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 266 - 318
Target Start/End: Complemental strand, 9660171 - 9660119
Alignment:
Q  266 ggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    |||||||||||||||||  ||||||||||  || | |||||||||||||||||    
T  9660171 ggaccaaaatgaaaacttgaaattaattaagggtccaaatgacctattaagcc 9660119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 9660802 - 9660730
Alignment:
Q  187 gttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttatta 259  Q
    |||||| |||||| | |||||||| ||||||||||||||| | |  | | |||| ||||||||||||||||||    
T  9660802 gttaaatttaacagcgagagatttttttgaccgacggagagacaattaaaggaccaaaacatgagttttatta 9660730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 179
Target Start/End: Complemental strand, 22115136 - 22115104
Alignment:
Q  147 gtggaccaaccttaagagtggtccaccacagac 179  Q
    |||||||||||||||||||||||||||| ||||    
T  22115136 gtggaccaaccttaagagtggtccaccatagac 22115104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 303
Target Start/End: Original strand, 30311520 - 30311572
Alignment:
Q  251 gttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaa 303  Q
    |||||||||||| ||||||||||||||||| |  |||||| |||| |||||||    
T  30311520 gttttattaattgtgggaccaaaatgaaaatttgaaattatttaggggactaa 30311572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 179
Target Start/End: Complemental strand, 40509706 - 40509674
Alignment:
Q  147 gtggaccaaccttaagagtggtccaccacagac 179  Q
    |||||||||||||||||||||||||||| ||||    
T  40509706 gtggaccaaccttaagagtggtccaccatagac 40509674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 41078988 - 41078940
Alignment:
Q  51 tcaccgtaagatacagtagacatgcatgatctaaccgtcctcttttaat 99  Q
    |||||| |||||||| |||||||||||||||||||  || |||||||||    
T  41078988 tcaccggaagatacaatagacatgcatgatctaacaatcatcttttaat 41078940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 3e-52; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 130 - 318
Target Start/End: Original strand, 48096962 - 48097149
Alignment:
Q  130 aattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataa 229  Q
    |||||||||||| |||||| |||||  ||||||  |||||||||| | ||||||| ||||||||||||||   || ||||||||||||||||||||| ||    
T  48096962 aattaataggatctatggtagaccactcttaaggttggtccaccatatacatttgaggttaaacttaacagt-agggatttatttgaccgacggagacaa 48097060  T
Q  230 acctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    |||| |||||| |||||||||||||||||| ||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||    
T  48097061 acctaagggactaaaacatgagttttattagttatgggaccaaaataaaaattggaaattaattagaggactaaatgacctattaagcc 48097149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 131 - 318
Target Start/End: Original strand, 15746697 - 15746884
Alignment:
Q  131 attaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaa 230  Q
    ||||||||||| ||||||||||||  ||||||| |||||||||| |||||||||  |||||||||||||      |||||||||||| |||||||||| |    
T  15746697 attaataggatctatggtggaccactcttaagattggtccaccatagacatttgaagttaaacttaacagtggatgatttatttgactgacggagataca 15746796  T
Q  231 cctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
      | |||||| |||||||||||||||||| |||||||||||||||||||| || ||||||||||| |||| |||||||||||||||||    
T  15746797 attaagggaccaaaacatgagttttattacttatgggaccaaaatgaaaattggaaattaattaggggaccaaatgacctattaagcc 15746884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 107 - 318
Target Start/End: Original strand, 46318525 - 46318735
Alignment:
Q  107 gatcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagag 206  Q
    |||||||| ||||||||||||  | |||||||||| ||||||||||||  || || |||  |||| || |||||||||||||||||||||||| |||  |    
T  46318525 gatcaaacgatttaaattaaaatatttaataggatctatggtggaccactctaaa-agtaatccatcatagacatttggggttaaacttaacagccaagg 46318623  T
Q  207 atttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatg 306  Q
    ||||||||||| |||||||||| |  |||||||| ||||||||| |||||||| ||||||||| ||||| ||||||  |||||||||| ||||| |||||    
T  46318624 atttatttgacagacggagatacaattgagggaccaaaacatgacttttattagttatgggacaaaaatcaaaacttgaaattaattaaaggaccaaatg 46318723  T
Q  307 acctattaagcc 318  Q
    ||||||||||||    
T  46318724 acctattaagcc 46318735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 165 - 318
Target Start/End: Complemental strand, 46467297 - 46467144
Alignment:
Q  165 tggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattat 264  Q
    |||||||||| ||||||||  |||||||||||||| | || ||||||||||||  ||||||  |||||||||||||  ||||||||||||||||| ||||    
T  46467297 tggtccaccatagacatttatggttaaacttaacagcgagggatttatttgacaaacggaggcaaacctgagggaccgaaacatgagttttattagttat 46467198  T
Q  265 gggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    ||||||||||||||||||  |||||||||| ||||  || ||||||||||||||    
T  46467197 gggaccaaaatgaaaacttgaaattaattaaaggatcaattgacctattaagcc 46467144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 42244728 - 42244629
Alignment:
Q  219 gacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    ||||||||| ||| | |||||| ||||||||||||||||||||||||||| ||||||||||| |  |||||||||| ||||| |||||||||||||||||    
T  42244728 gacggagatcaacttaagggaccaaaacatgagttttattaattatgggatcaaaatgaaaatttgaaattaattaaaggaccaaatgacctattaagcc 42244629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 107 - 300
Target Start/End: Original strand, 15072697 - 15072890
Alignment:
Q  107 gatcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagag 206  Q
    ||||||||||||||||||||  ||||||||||  | || |||||||||  ||| ||  |||||||||| ||||||||| ||||||| ||||||  ||  |    
T  15072697 gatcaaacaatttaaattaagaaaattaatagagtctacggtggaccactctttaggttggtccaccatagacatttgaggttaaagttaacagacatgg 15072796  T
Q  207 atttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    ||||||||| |  ||||||  |||  | |||||| ||||  |  |||||||||||| |||||||||||||||||||  ||||||||||||||||    
T  15072797 atttatttggcaaacggaggaaaaaataagggaccaaaatgtacgttttattaattgtgggaccaaaatgaaaacttgaaattaattagaggac 15072890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 206 - 318
Target Start/End: Complemental strand, 15743386 - 15743274
Alignment:
Q  206 gatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaat 305  Q
    |||||||||||| || ||||||| |    |||||| |||||||||||||||||| ||||| ||||||||| |||| || |||||||||||||||| ||||    
T  15743386 gatttatttgactgatggagatacaatcaagggaccaaaacatgagttttattacttatgagaccaaaataaaaattggaaattaattagaggaccaaat 15743287  T
Q  306 gacctattaagcc 318  Q
     ||||||||||||    
T  15743286 aacctattaagcc 15743274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 165 - 299
Target Start/End: Complemental strand, 16123438 - 16123304
Alignment:
Q  165 tggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattat 264  Q
    ||||| |||| ||||||||| | ||||||||||||||||| |||||||||| |  |||||   |||  |||||||| ||||| ||| ||||||||||| |    
T  16123438 tggtctaccatagacatttgagattaaacttaacaaccagggatttatttggcaaacggaagaaaaaatgagggactaaaacgtgaattttattaattgt 16123339  T
Q  265 gggaccaaaatgaaaactgaaaattaattagagga 299  Q
    || |||||||||||||||  |||||| ||||||||    
T  16123338 ggaaccaaaatgaaaactttaaattatttagagga 16123304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 51 - 198
Target Start/End: Original strand, 9226067 - 9226213
Alignment:
Q  51 tcaccgtaagatacagtagacatgcatgatctaaccgtcctcttttaatnnnnnnngatcaaacaatttaaattaaataaattaataggatatatggtgg 150  Q
    ||||||||||||| | ||||||||| |||| |||  || ||||||||||       |||||||||||||||||||||  |||||||||||| ||||||||    
T  9226067 tcaccgtaagataaaatagacatgcgtgatttaatggttctcttttaataaaaaa-gatcaaacaatttaaattaaaataattaataggatctatggtgg 9226165  T
Q  151 accaaccttaagagtggtccaccacagacatttggggttaaacttaac 198  Q
    ||||   |||||  || ||||||| ||||||||| ||||||| |||||    
T  9226166 accacttttaaggttgatccaccatagacatttgaggttaaatttaac 9226213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 233 - 318
Target Start/End: Original strand, 42245920 - 42246005
Alignment:
Q  233 tgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    |||||||| |||| |||||||||||||||||||| |||||||| ||||||  ||||||||||  ||| ||||||| ||||||||||    
T  42245920 tgagggaccaaaagatgagttttattaattatggaaccaaaataaaaacttgaaattaattaagggattaaatgatctattaagcc 42246005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 836226 - 836293
Alignment:
Q  233 tgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    ||||||||  |||||||  |||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  836226 tgagggactgaaacatggattttattagttatgagaccaaaatgaaaactgaaaattaattagaggac 836293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 109 - 192
Target Start/End: Original strand, 13147325 - 13147408
Alignment:
Q  109 tcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaa 192  Q
    |||||||||||||||||||  |||||||||||| ||||||||||||   |||||  |||||||||| ||||||||||| |||||    
T  13147325 tcaaacaatttaaattaaaataattaataggatctatggtggaccactattaaggttggtccaccatagacatttgggattaaa 13147408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 186 - 317
Target Start/End: Original strand, 46468705 - 46468836
Alignment:
Q  186 ggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaa 285  Q
    ||||||||||| || |  | ||||||||||||  || |||  |||| ||| ||||  ||||||||||||||||| ||||||||||||||| |||| |  |    
T  46468705 ggttaaacttatcagcgtgggatttatttgacaaacagaggcaaacttgatggaccgaaacatgagttttattagttatgggaccaaaataaaaatttga 46468804  T
Q  286 aattaattagaggactaaatgacctattaagc 317  Q
    ||||||||| || || ||||||||||||||||    
T  46468805 aattaattaaagaaccaaatgacctattaagc 46468836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 8027524 - 8027462
Alignment:
Q  23 atgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaac 85  Q
    ||||||||||| | ||||||||||| |||||| |||||||||||| |||||||||||||||||    
T  8027524 atgggatataatgctagatgttgttggttcacagtaagatacagtggacatgcatgatctaac 8027462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 143 - 293
Target Start/End: Original strand, 41873914 - 41874064
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaa 242  Q
    ||||||||||||  ||||||  |||||||||| ||||||||| ||||||||||||||||||  ||||||||||    ||||||  ||| || | || | |    
T  41873914 tatggtggaccactcttaaggttggtccaccatagacatttgtggttaaacttaacaaccaaggatttatttggtaaacggaggaaaagctaaagggcca 41874013  T
Q  243 aaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaatt 293  Q
    ||| ||   |||||||||||||| |||||| ||||||| || |||||||||    
T  41874014 aaagatactttttattaattatgagaccaagatgaaaaatggaaattaatt 41874064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 315
Target Start/End: Original strand, 7161366 - 7161474
Alignment:
Q  206 gatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaat 305  Q
    |||||||||||| |||||||  ||||||||||||| ||||||||| |||||||| ||||| || |||||| |||| |  ||||||||||  |||  ||||    
T  7161366 gatttatttgac-gacggaggcaaacctgagggaccaaaacatgaattttattacttatgagatcaaaataaaaatttgaaattaattaagggaacaaat 7161464  T
Q  306 gacctattaa 315  Q
    ||||||||||    
T  7161465 gacctattaa 7161474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 6049254 - 6049410
Alignment:
Q  28 atataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaaccgtcctcttttaatnnnnnnngatcaaacaatttaaattaaa 127  Q
    |||| ||||||  ||||||| |||||  |||||||||||||||||||||||||||||  |||||||||||||        ||||| |  |||||||||||    
T  6049254 atattaagttaattgttgttggttcattgtaagatacagtagacatgcatgatctaatggtcctcttttaataaaaaat-atcaatcggtttaaattaaa 6049352  T
Q  128 taaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttgg 185  Q
      |||||| ||||| || |||||||||   || ||| |||||||||| ||||||||||    
T  6049353 ataattaacaggatctacggtggaccactatttagattggtccaccatagacatttgg 6049410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 51042376 - 51042436
Alignment:
Q  234 gagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaatta 294  Q
    ||||||| ||||| ||||||||||||||| ||||||||||||||||| || ||||||||||    
T  51042376 gagggactaaaacgtgagttttattaattgtgggaccaaaatgaaaattggaaattaatta 51042436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 206 - 292
Target Start/End: Original strand, 30535675 - 30535761
Alignment:
Q  206 gatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaat 292  Q
    ||||||||||||  |||||| || |  ||||| || ||||| |  |||||||||||||||| |||||||||||||||||||||||||    
T  30535675 gatttatttgacaaacggagttagatttgaggaactaaaacgttggttttattaattatggaaccaaaatgaaaactgaaaattaat 30535761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 243 - 300
Target Start/End: Complemental strand, 835318 - 835261
Alignment:
Q  243 aaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    |||| |||||||||||| ||||| ||||||||||||||||| ||||||||||| ||||    
T  835318 aaacgtgagttttattagttatgagaccaaaatgaaaactgcaaattaattaggggac 835261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 117 - 295
Target Start/End: Original strand, 10722293 - 10722473
Alignment:
Q  117 tttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagaga--tttattt 214  Q
    ||||||||||| |||||| ||| || |||| |||||||  ||| ||  ||||||| || ||| ||||| ||||||| |||||  |||| |   || ||||    
T  10722293 tttaaattaaaaaaattagtagaatctatgatggaccactctttaggttggtccatcatagatatttgaggttaaagttaacggccagggggcttcattt 10722392  T
Q  215 gaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattag 295  Q
    ||  |||| ||| |||| |||| ||| ||||||||||||||| || ||||| ||| ||||||||||||  |||||||||||    
T  10722393 gattgacgaagacaaacgtgagagaccaaaacatgagttttactagttatgagacgaaaatgaaaacttgaaattaattag 10722473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 143 - 300
Target Start/End: Complemental strand, 14471029 - 14470872
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaa 242  Q
    ||||||||||||  ||||||  |||||||| | |||| ||||||||||||||||||| | |  |||||||||| |  ||| ||  |||  ||||||||      
T  14471029 tatggtggaccactcttaaggttggtccactatagacgtttggggttaaacttaacaccgaaggatttatttggcaaacgaaggaaaaagtgagggactt 14470930  T
Q  243 aaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    || | |  |||||||||||| |||||||||||||||||||  |||||| |||| ||||    
T  14470929 aaccgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggac 14470872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 143 - 290
Target Start/End: Original strand, 14477734 - 14477881
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaa 242  Q
    |||||||||| |  ||||||| || || |||| |||||||| | ||||||||||||| | |  |||||||||| |  ||||||| |||  ||||||||      
T  14477734 tatggtggacaactcttaagattgatctaccatagacatttagagttaaacttaacatcgaaggatttatttggcaaacggagaaaaaagtgagggactt 14477833  T
Q  243 aaacatgagttttattaattatgggaccaaaatgaaaactgaaaatta 290  Q
    |||| |  |||||||||||| ||||| |||| |||||||| |||||||    
T  14477834 aaacgtacgttttattaattgtgggatcaaagtgaaaacttaaaatta 14477881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 15071425 - 15071358
Alignment:
Q  233 tgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    |||||||| |||||||  ||||||||||||||| ||||||||||||||||  |||||| |||| ||||    
T  15071425 tgagggaccaaaacatacgttttattaattatgtgaccaaaatgaaaacttgaaattatttaggggac 15071358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 24499688 - 24499755
Alignment:
Q  233 tgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    |||||||| ||||| ||||||||||||||| || ||||||||||||||||  |||||| |||| ||||    
T  24499688 tgagggaccaaaacgtgagttttattaattgtgagaccaaaatgaaaacttgaaattatttaggggac 24499755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 318
Target Start/End: Complemental strand, 20064280 - 20064174
Alignment:
Q  212 tttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgaccta 311  Q
    |||||||||||| | || |  ||| |||| ||||| || |||||||||  |||||||||||||||||||| | |||||||||   |||| |||||| |||    
T  20064280 tttgaccgacggggttataattgaaggaccaaaacgtgtgttttattagatatgggaccaaaatgaaaacgggaaattaattgagggaccaaatgagcta 20064181  T
Q  312 ttaagcc 318  Q
    |||||||    
T  20064180 ttaagcc 20064174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 295
Target Start/End: Complemental strand, 44276272 - 44276143
Alignment:
Q  165 tggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattat 264  Q
    |||||||||| |  |||||| ||||||||||||||  ||| |||||| |||||  || |||| |||  ||| |||  ||||| |  ||||||||||||||    
T  44276272 tggtccaccatacgcatttgtggttaaacttaacagtcag-gatttaattgacaaacagagaaaaaagtgaaggatcaaaacgtacgttttattaattat 44276174  T
Q  265 gggaccaaaatgaaaactgaaaattaattag 295  Q
    | |||||||||||||| || |||||||||||    
T  44276173 gagaccaaaatgaaaaatggaaattaattag 44276143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 18819031 - 18818974
Alignment:
Q  261 ttatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    ||||||||||| |||||||||||||||||||||| ||||  ||| |||| ||||||||    
T  18819031 ttatgggaccataatgaaaactgaaaattaattaaaggatcaaaagaccaattaagcc 18818974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 20069899 - 20069980
Alignment:
Q  212 tttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaatt 293  Q
    |||||||||||||| || |  ||| |||| |||||||| |||||||||  |||| ||||||||||||||| | |||||||||    
T  20069899 tttgaccgacggagttataattgaaggaccaaaacatgtgttttattagatatgagaccaaaatgaaaacgggaaattaatt 20069980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 107 - 200
Target Start/End: Complemental strand, 48527743 - 48527650
Alignment:
Q  107 gatcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaa 200  Q
    ||||||||| |||||||||||  |||| ||| ||| ||||||||||||  |||||   ||||| |||| |||||||||| |||||| |||||||    
T  48527743 gatcaaacagtttaaattaaaataattgataagatctatggtggaccactcttaaagttggtcgaccatagacatttggagttaaagttaacaa 48527650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 179
Target Start/End: Complemental strand, 41873947 - 41873911
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccaccacagac 179  Q
    |||||||||||||||||||||||||||||||| ||||    
T  41873947 tatggtggaccaaccttaagagtggtccaccatagac 41873911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 3617417 - 3617496
Alignment:
Q  120 aaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaaca 199  Q
    ||||||||  |||||||||||| ||| ||||||||  ||||||  |||| ||||| ||||||||| ||||||| ||||||    
T  3617417 aaattaaaataattaataggatctatagtggaccactcttaaggttggttcaccatagacatttgaggttaaagttaaca 3617496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 5612993 - 5613083
Alignment:
Q  108 atcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaaca 199  Q
    |||||||  |||||||||||  |||||||||||| ||||||||| | || ||||  ||| ||||||| | ||||||||||||||| ||||||    
T  5612993 atcaaacggtttaaattaaaataattaataggatctatggtggatc-actttaaaggtgatccaccataaacatttggggttaaagttaaca 5613083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 12665999 - 12665909
Alignment:
Q  107 gatcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaac 198  Q
    ||||||||  ||||||||||  ||||||||| ||| ||||||||||||  ||||||| |||| ||||| | ||||||| ||||||| |||||    
T  12665999 gatcaaacggtttaaattaacaaaattaataagatctatggtggaccactcttaaga-tggttcaccataaacatttgaggttaaagttaac 12665909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 327
Target Start/End: Complemental strand, 15232816 - 15232741
Alignment:
Q  252 ttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcccaacttttt 327  Q
    ||||||||||||||||||||||||||||||   ||||||| ||  |||| |||||| ||| |||||| || |||||    
T  15232816 ttttattaattatgggaccaaaatgaaaacatgaaattaaataagggaccaaatgatctaataagcctaaattttt 15232741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 33369247 - 33369290
Alignment:
Q  252 ttttattaattatgggaccaaaatgaaaactgaaaattaattag 295  Q
    ||||||||||||||||||||||||||| |||  |||||||||||    
T  33369247 ttttattaattatgggaccaaaatgaatacttgaaattaattag 33369290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 204
Target Start/End: Original strand, 35943364 - 35943451
Alignment:
Q  117 tttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccag 204  Q
    |||||| |||| || |||||| | | ||||||||| ||  ||||||  |||||||||| |||||||| ||||||||||||||| ||||    
T  35943364 tttaaaataaaaaatttaataaggtctatggtggatcactcttaaggttggtccaccatagacatttagggttaaacttaacagccag 35943451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 199
Target Start/End: Complemental strand, 41872775 - 41872692
Alignment:
Q  117 tttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacattt-ggggttaaacttaaca 199  Q
    ||||||||||| || |||||| | | ||||||| || || ||||||| |||| ||||| |||||||| ||||||||||||||||    
T  41872775 tttaaattaaaaaatttaataaggtctatggtgaactaatcttaagattggttcaccatagacatttgggggttaaacttaaca 41872692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 295
Target Start/End: Original strand, 44278369 - 44278444
Alignment:
Q  220 acggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattag 295  Q
    ||||||| |||  |||||||| ||||| |  |||||||||||  |||||||||||||||||||  |||||||||||    
T  44278369 acggagaaaaaaatgagggaccaaaacgtacgttttattaatcgtgggaccaaaatgaaaacttgaaattaattag 44278444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 281
Target Start/End: Original strand, 49802901 - 49802976
Alignment:
Q  206 gatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaac 281  Q
    |||||||||| |  ||||||| |||  |||||||| ||||| | | ||||||||||| ||||||||||||||||||    
T  49802901 gatttatttggcaaacggagaaaaagatgagggactaaaacgtcatttttattaattgtgggaccaaaatgaaaac 49802976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 252 - 326
Target Start/End: Complemental strand, 11661637 - 11661563
Alignment:
Q  252 ttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcccaactttt 326  Q
    |||||||||||| ||||||||||| |||  | || ||||||||  |||||||||| || |||||||| |||||||    
T  11661637 ttttattaattaggggaccaaaataaaatatcaatattaattaagggactaaatgtccaattaagcctaactttt 11661563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 304
Target Start/End: Original strand, 12667341 - 12667379
Alignment:
Q  266 ggaccaaaatgaaaactgaaaattaattagaggactaaa 304  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  12667341 ggaccaaaatgaaaactgataattatttagaggactaaa 12667379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 28757039 - 28757081
Alignment:
Q  252 ttttattaattatgggaccaaaatgaaaactgaaaattaatta 294  Q
    |||||||||||| ||||||||||| ||| ||||||||||||||    
T  28757039 ttttattaattaggggaccaaaataaaacctgaaaattaatta 28757081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 34352008 - 34352046
Alignment:
Q  252 ttttattaattatgggaccaaaatgaaaactgaaaatta 290  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  34352008 ttttattaattgtgggaccaaaatgaaaacttaaaatta 34352046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 165 - 303
Target Start/End: Complemental strand, 44795336 - 44795199
Alignment:
Q  165 tggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattat 264  Q
    |||||||||  | |||||||  |||||||||||||| |   |||||  |||||  ||| |||| ||| ||||||||  |||| ||| |||||||| ||||    
T  44795336 tggtccaccttacacatttgtcgttaaacttaacaaacgtggattttgttgacaaacgaagatgaacttgagggaccgaaacgtgaattttatta-ttat 44795238  T
Q  265 gggaccaaaatgaaaactgaaaattaattagaggactaa 303  Q
       |||||||| ||||||||||||||||||| |||||||    
T  44795237 aacaccaaaataaaaactgaaaattaattaggggactaa 44795199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 45584827 - 45584877
Alignment:
Q  22 aatgggatataaagttagatgttgttagttcaccgtaagatacagtagaca 72  Q
    |||| ||||||||||||||||||||| |||||  |||||||||| ||||||    
T  45584827 aatgagatataaagttagatgttgttggttcatagtaagatacactagaca 45584877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 295
Target Start/End: Complemental strand, 10711860 - 10711807
Alignment:
Q  242 aaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattag 295  Q
    ||||||||||||||| || ||||| ||| ||||||||||||  |||||||||||    
T  10711860 aaaacatgagttttactagttatgagacgaaaatgaaaacttcaaattaattag 10711807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 294
Target Start/End: Complemental strand, 16963917 - 16963856
Alignment:
Q  233 tgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaatta 294  Q
    |||||||| ||||||  | ||||||||||| ||||||||||||||||||   ||||||||||    
T  16963917 tgagggactaaaacaccatttttattaattgtgggaccaaaatgaaaacatgaaattaatta 16963856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 174
Target Start/End: Complemental strand, 16965103 - 16965070
Alignment:
Q  141 tatatggtggaccaaccttaagagtggtccacca 174  Q
    |||||||||||||||| |||||||||||||||||    
T  16965103 tatatggtggaccaactttaagagtggtccacca 16965070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 26287843 - 26287904
Alignment:
Q  259 aattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagccca 320  Q
    |||||||||||||||||||||||   |||||| ||||||||| ||| | || ||||||||||    
T  26287843 aattatgggaccaaaatgaaaacaacaaattagttagaggaccaaaagtccaattaagccca 26287904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 27556477 - 27556429
Alignment:
Q  107 gatcaaacaatttaaattaaataaattaataggatatatggtggaccaac 156  Q
    ||||||||  ||||||||||| ||||||||||||| ||||||||||||||    
T  27556477 gatcaaactgtttaaattaaa-aaattaataggatctatggtggaccaac 27556429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 174
Target Start/End: Complemental strand, 48097010 - 48096977
Alignment:
Q  141 tatatggtggaccaaccttaagagtggtccacca 174  Q
    ||||||||||||||||||||||||||||| ||||    
T  48097010 tatatggtggaccaaccttaagagtggtctacca 48096977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 270 - 318
Target Start/End: Original strand, 18821809 - 18821857
Alignment:
Q  270 caaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    ||||||||||||||||| ||||||||||||| ||| |||| | ||||||    
T  18821809 caaaatgaaaactgaaagttaattagaggaccaaaagaccaaataagcc 18821857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 280
Target Start/End: Complemental strand, 23091503 - 23091387
Alignment:
Q  165 tggtccaccacagacatttggggttaaacttaaca-accagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaatta 263  Q
    |||||||||| ||||||||| | |||||||||||| || || |||||||||| |  ||||||| |||  |||| ||| ||||| |  ||||||||||||     
T  23091503 tggtccaccatagacatttgagattaaacttaacagactagggatttatttggcaaacggagaaaaaagtgagtgaccaaaacgtacgttttattaattg 23091404  T
Q  264 tgggaccaaaatgaaaa 280  Q
    |   |||||||||||||    
T  23091403 taaaaccaaaatgaaaa 23091387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 34350253 - 34350289
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccaccacagac 179  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  34350253 tatggtggatcaaccttaagagtggtccaccatagac 34350289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 179
Target Start/End: Complemental strand, 35943423 - 35943387
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccaccacagac 179  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  35943423 tatggtggaccaaccttaagagtgatccaccatagac 35943387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 171
Target Start/End: Original strand, 46110421 - 46110449
Alignment:
Q  143 tatggtggaccaaccttaagagtggtcca 171  Q
    |||||||||||||||||||||||||||||    
T  46110421 tatggtggaccaaccttaagagtggtcca 46110449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 206 - 318
Target Start/End: Complemental strand, 49801727 - 49801615
Alignment:
Q  206 gatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaat 305  Q
    |||||||||| |  || |||| |||| |||||||  ||||||  | ||||||||||| |||||||||||||||||   |||||||| ||  |||| ||||    
T  49801727 gatttatttggcaaacagagacaaacgtgagggatcaaaacaccatttttattaattgtgggaccaaaatgaaaatataaaattaaataagggaccaaat 49801628  T
Q  306 gacctattaagcc 318  Q
    || ||| ||||||    
T  49801627 gatctaataagcc 49801615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 98; Significance: 5e-48; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 117 - 318
Target Start/End: Complemental strand, 127632 - 127431
Alignment:
Q  117 tttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttga 216  Q
    ||||||||||| | ||||||||||| ||||||||||||  ||||||  || | ||||| ||||||||| ||||||| |||||   ||| |||||||||||    
T  127632 tttaaattaaaaacattaataggatctatggtggaccactcttaaggttgtttcaccatagacatttgaggttaaagttaactgtcagggatttatttga 127533  T
Q  217 ccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaag 316  Q
    |||||||||  |||| |||||||| |||||||||||||||||| |||||||||||||| |||||||  ||||||||||| |||| |||||||||||||||    
T  127532 ccgacggaggcaaacatgagggaccaaaacatgagttttattagttatgggaccaaaacgaaaacttgaaattaattaggggaccaaatgacctattaag 127433  T
Q  317 cc 318  Q
    ||    
T  127432 cc 127431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 206 - 318
Target Start/End: Original strand, 128597 - 128709
Alignment:
Q  206 gatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaat 305  Q
    ||||| ||||||||||||||| |||  | |||||| |||||||||||||||||| | || ||||||||||||||||| |||||||||||  |||| ||||    
T  128597 gatttttttgaccgacggagacaaatttaagggaccaaaacatgagttttattagtaataggaccaaaatgaaaacttaaaattaattaagggaccaaat 128696  T
Q  306 gacctattaagcc 318  Q
    |||||||||||||    
T  128697 gacctattaagcc 128709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 5e-48; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 130 - 318
Target Start/End: Complemental strand, 40723413 - 40723225
Alignment:
Q  130 aattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataa 229  Q
    |||||||||||| |||||| |||||  ||||||  |||||||||| | ||||||| ||||||||||||||    | ||||||||||||||||||||||||    
T  40723413 aattaataggatctatggtagaccactcttaaggttggtccaccatatacatttgaggttaaacttaacagtatg-gatttatttgaccgacggagataa 40723315  T
Q  230 acctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactg-aaaattaattagaggactaaatgacctattaagcc 318  Q
    |||| |||||| |||||||||||||||||| |||||||||||||||||||| || |||||||||||| |||| |||||||||||||||||    
T  40723314 acctaagggaccaaaacatgagttttattagttatgggaccaaaatgaaaattgcaaaattaattaggggaccaaatgacctattaagcc 40723225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 58 - 318
Target Start/End: Complemental strand, 7053434 - 7053178
Alignment:
Q  58 aagatacagtagacatgcatgatctaaccgtcctcttttaatnnnnnnngatcaaacaatttaaattaaataaattaataggatatatggtggaccaacc 157  Q
    ||||||||||||||||||||||||||||  ||||||||||||       |||||||| |||||||||||| ||||||||||||| ||||||||| ||  |    
T  7053434 aagatacagtagacatgcatgatctaacgatcctcttttaataaaaaa-gatcaaacgatttaaattaaaaaaattaataggatctatggtggatcactc 7053336  T
Q  158 ttaagagtggtccaccac-agacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagtttta 256  Q
    |||||| |||||||| |  ||||||| | | ||||||||||||     | |||||||||||  ||  ||  ||||  |||||||||||| || |||||||    
T  7053335 ttaagattggtccacaaatagacattcgagattaaacttaacagt---acatttatttgactaacaaagc-aaactagagggacaaaaatataagtttta 7053240  T
Q  257 ttaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    |||||||||| ||||||||| |||||||||||||||||| |||  |||||||||||||||||    
T  7053239 ttaattatggaaccaaaatgtaaactgaaaattaattaggggaaaaaatgacctattaagcc 7053178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 165 - 318
Target Start/End: Original strand, 13533226 - 13533378
Alignment:
Q  165 tggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattat 264  Q
    |||||||||| |||||||||  |||||| ||||||  | | ||||||||||||||||||||| |||| |||||||| |||||||||||||| ||| ||||    
T  13533226 tggtccaccatagacatttgaagttaaatttaacagtctg-gatttatttgaccgacggagacaaacgtgagggaccaaaacatgagtttttttagttat 13533324  T
Q  265 gggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    || || || |||||||||  |||||||||||||||| |||||||||||||||||    
T  13533325 ggaactaagatgaaaacttgaaattaattagaggaccaaatgacctattaagcc 13533378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 165 - 318
Target Start/End: Complemental strand, 53432213 - 53432060
Alignment:
Q  165 tggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattat 264  Q
    |||| ||||| |||||||||||||||||||||||   ||| ||||||||||||| ||| ||  |||| |||||||| ||||||| |||||||||| ||||    
T  53432213 tggttcaccatagacatttggggttaaacttaaccgtcagggatttatttgaccaacgaaggcaaacttgagggaccaaaacataagttttattacttat 53432114  T
Q  265 gggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    ||||||||||||||||||  ||||||||||  |||  ||| |||||||||||||    
T  53432113 gggaccaaaatgaaaacttgaaattaattaagggatcaaacgacctattaagcc 53432060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 13 - 315
Target Start/End: Original strand, 28590718 - 28591020
Alignment:
Q  13 agatgaaacaatgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaaccgtcctcttttaatnnnnnnngatcaa 112  Q
    |||||||||||||| | | ||||||||||||| ||  ||||||||||||| | |||||||||||||||||||| || ||||||||||       ||||||    
T  28590718 agatgaaacaatggaagacaaagttagatgtttttgattcaccgtaagatccggtagacatgcatgatctaacggtactcttttaat-aaaaaagatcaa 28590816  T
Q  113 acaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccacc--acagacatttggggttaaacttaacaaccagagattt 210  Q
    ||| |||| ||||||  |||||||||||| |||| || | ||  |||||   |||| ||||  | |||||||| |||||||| |||||   || | ||||    
T  28590817 acagtttatattaaaataattaataggatctatgatgaatcactcttaaagttggttcaccatatagacatttagggttaaatttaacgggca-aaattt 28590915  T
Q  211 atttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacct 310  Q
    |||||||| ||| ||| | |  | | |||| |||||||||||||||||| ||||||||||||||||||| ||| |||||| |||  |||| |||| ||||    
T  28590916 atttgaccaacgaagacacaattaaaggaccaaaacatgagttttattatttatgggaccaaaatgaaagctggaaattatttaagggaccaaataacct 28591015  T
Q  311 attaa 315  Q
    |||||    
T  28591016 attaa 28591020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 146 - 313
Target Start/End: Original strand, 53435699 - 53435866
Alignment:
Q  146 ggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaa 245  Q
    |||||||||  ||||||  ||||| |||| ||||||||   ||||||||||||   ||  ||||||||||||| |||||| ||||| |||||| | ||||    
T  53435699 ggtggaccactcttaaggttggtctaccatagacatttaaagttaaacttaaccgtcaaggatttatttgaccaacggaggtaaacttgaggggccaaaa 53435798  T
Q  246 catgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctatt 313  Q
    |||||||||||||| ||||||||||||||||||||||  ||||||||||  |||  ||||||||||||    
T  53435799 catgagttttattacttatgggaccaaaatgaaaacttgaaattaattaagggatcaaatgacctatt 53435866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 318
Target Start/End: Original strand, 40724820 - 40724960
Alignment:
Q  176 agacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaat 275  Q
    ||||||||||| ||||||||||| | ||  ||||||||||||  ||||||| |||| | |||||| |||||||||||||||||| |  ||||| ||||||    
T  40724820 agacatttgggattaaacttaaccatcatggatttatttgactaacggagacaaacttaagggaccaaaacatgagttttattagt--tgggatcaaaat 40724917  T
Q  276 gaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
     ||||||| ||||||||||  |||| |||||||||||||||||    
T  40724918 aaaaactgcaaattaattaagggaccaaatgacctattaagcc 40724960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 165 - 300
Target Start/End: Complemental strand, 52963719 - 52963585
Alignment:
Q  165 tggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattat 264  Q
    |||||||||| |||||||||| |||||| ||||||  | ||||||||||||||  ||||||| |||| |||||||| |||||||  | |||||||||| |    
T  52963719 tggtccaccatagacatttggagttaaagttaacagtc-gagatttatttgacaaacggagaaaaacttgagggaccaaaacatacgatttattaattgt 52963621  T
Q  265 gggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    | ||||||||||||||||  |||||| |||||||||    
T  52963620 gagaccaaaatgaaaacttgaaattatttagaggac 52963585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 2162703 - 2162625
Alignment:
Q  222 ggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    |||||| ||| |||||||| |||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  2162703 ggagatgaacttgagggaccaaaatatgagttttattagttatgggactaaaatgaaaactgaaaattaattagaggac 2162625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 130 - 317
Target Start/End: Complemental strand, 34326913 - 34326729
Alignment:
Q  130 aattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataa 229  Q
    |||||||||||| ||| || |||||  |||||   ||||||||||   | ||||||| ||||| |||||| |  | ||||||||||||||||  ||| ||    
T  34326913 aattaataggatctatagtagaccactcttaaagttggtccaccatgtatatttgggattaaatttaacagc--gggatttatttgaccgacaaagacaa 34326816  T
Q  230 acctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagc 317  Q
    |||| |||||| ||||||| |||||||||| ||||||||  || ||||||| | |||||||||||| |||| ||||||||||||||||    
T  34326815 acctaagggaccaaaacataagttttatta-ttatgggattaagatgaaaattaaaaattaattaggggaccaaatgacctattaagc 34326729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 236 - 318
Target Start/End: Complemental strand, 668466 - 668384
Alignment:
Q  236 gggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    ||||| ||||| |||||||||||| ||||| ||||||||||||||||||||||||||| |||||  ||||||| |||||||||    
T  668466 gggaccaaaacgtgagttttattagttatgagaccaaaatgaaaactgaaaattaattggaggatcaaatgacttattaagcc 668384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 233 - 310
Target Start/End: Original strand, 669678 - 669755
Alignment:
Q  233 tgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacct 310  Q
    |||||||| ||||  ||||||||||||||||||||||||||||||||| |||||||||||| | |||| |||||||||    
T  669678 tgagggaccaaaatgtgagttttattaattatgggaccaaaatgaaaattgaaaattaattgggggaccaaatgacct 669755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 165 - 315
Target Start/End: Original strand, 14524816 - 14524966
Alignment:
Q  165 tggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattat 264  Q
    ||||||| || ||||||||||||||||||||||||   || ||||| |||| |  ||||||  |||  | || ||| |||||||||||||||||||||||    
T  14524816 tggtccatcatagacatttggggttaaacttaacagttagggatttttttg-caaacggagggaaaagtaagagactaaaacatgagttttattaattat 14524914  T
Q  265 gggaccaaaatg-aaaactgaaaattaattagaggactaaatgacctattaa 315  Q
    |||| ||||||| ||||||  |||||||||| ||||| || |||||||||||    
T  14524915 gggatcaaaatgaaaaacttgaaattaattaaaggaccaagtgacctattaa 14524966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 318
Target Start/End: Original strand, 38698032 - 38698146
Alignment:
Q  204 gagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaa 303  Q
    ||||||| |||||| |||||||| | |  | | |||| ||||||||| ||||||||  ||||||||||||||||||| || |||||| ||| ||||| ||    
T  38698032 gagatttttttgacagacggagacacagttaaaggaccaaaacatgacttttattagatatgggaccaaaatgaaaattggaaattatttaaaggaccaa 38698131  T
Q  304 atgacctattaagcc 318  Q
    |||||||||||||||    
T  38698132 atgacctattaagcc 38698146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 206 - 300
Target Start/End: Complemental strand, 40792861 - 40792767
Alignment:
Q  206 gatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    |||||||||| |  ||||||| ||| ||||||||| ||||  |  |||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  40792861 gatttatttggcaaacggagaaaaatctgagggaccaaaatgtatgttttattaattgtgggaccaaaatgaaaacttaaaattaattagaggac 40792767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 207 - 315
Target Start/End: Complemental strand, 28589890 - 28589782
Alignment:
Q  207 atttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatg 306  Q
    |||||||||||||||||||| | |  | | | || ||||||| ||||||| || |||||||||||||||||||||||||||||| |||  |||  |||||    
T  28589890 atttatttgaccgacggagacataattaaagtaccaaaacataagttttaatacttatgggaccaaaatgaaaactgaaaattatttaagggatcaaatg 28589791  T
Q  307 acctattaa 315  Q
    |||||||||    
T  28589790 acctattaa 28589782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 108 - 198
Target Start/End: Original strand, 2312388 - 2312481
Alignment:
Q  108 atcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacaga---catttggggttaaacttaac 198  Q
    |||||||| |||||||||||  |||||||||||| ||||||||||||   |||||| |||||||||| |||   ||||||||||||||||||||    
T  2312388 atcaaacagtttaaattaaaataattaataggatctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaac 2312481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 117 - 303
Target Start/End: Original strand, 11438485 - 11438671
Alignment:
Q  117 tttaaattaaataaattaataggatatatggtggaccaaccttaagagt-ggtccaccacagacatttggggttaaacttaacaaccagagatttatttg 215  Q
    ||||||||||| ||||||||||| | |||||||||||| |||  |  || ||||||||  |||||||||||||||||||||| |  |||||||||||||     
T  11438485 tttaaattaaagaaattaatagggtttatggtggacca-cctacactgttggtccaccgtagacatttggggttaaacttaaaagtcagagatttattta 11438583  T
Q  216 accgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaa 303  Q
     |  | ||||  |||  |||||||| |||||  | ||||||||||||||| ||||||||| ||||||  ||||||  ||| |||||||    
T  11438584 gcaaatggaggaaaaagtgagggaccaaaacgagtgttttattaattatgagaccaaaataaaaacttcaaattatataggggactaa 11438671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 56085555 - 56085464
Alignment:
Q  108 atcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaaca 199  Q
    |||||||  |||||||||||  |||||||||||| ||||||||||||  ||||||  | |||||||| ||||||||||||||||| ||||||    
T  56085555 atcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaaggttagtccaccatagacatttggggttaaagttaaca 56085464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 51 - 198
Target Start/End: Original strand, 15449926 - 15450075
Alignment:
Q  51 tcaccgtaagatacagtagacatgcatgatctaaccgtcctcttttaatnnnnnnngatcaaacaatttaaattaaataaattaataggatatatggtgg 150  Q
    |||||| |||||||| |||||||||||||||||||  || |||||||||       || |||||| ||||||||||| | ||||||||||| ||||||||    
T  15449926 tcaccggaagatacactagacatgcatgatctaacgatcatcttttaataaaaaa-gagcaaacagtttaaattaaaaatattaataggatctatggtgg 15450024  T
Q  151 accaaccttaagagtggtccaccacag---acatttggggttaaacttaac 198  Q
    ||||  ||||||  |||||||| | ||   |||||||| ||||||||||||    
T  15450025 accactcttaaggttggtccacgatagacaacatttggagttaaacttaac 15450075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 22161578 - 22161640
Alignment:
Q  23 atgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaac 85  Q
    ||||||||||| | ||||||||||| |||||| |||||||||||| |||||||||||||||||    
T  22161578 atgggatataatgctagatgttgttggttcacagtaagatacagtggacatgcatgatctaac 22161640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 23317125 - 23317187
Alignment:
Q  23 atgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaac 85  Q
    ||||||||||| | ||||||||||| |||||| |||||||||||| |||||||||||||||||    
T  23317125 atgggatataatgctagatgttgttggttcacagtaagatacagtggacatgcatgatctaac 23317187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 25922201 - 25922263
Alignment:
Q  23 atgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaac 85  Q
    ||||||||||| | ||||||||||| |||||| |||||||||||| |||||||||||||||||    
T  25922201 atgggatataatgctagatgttgttggttcacagtaagatacagtggacatgcatgatctaac 25922263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 50997281 - 50997343
Alignment:
Q  23 atgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaac 85  Q
    ||||||||||| | ||||||||||| |||||| |||||||||||| |||||||||||||||||    
T  50997281 atgggatataatgctagatgttgttggttcacagtaagatacagtggacatgcatgatctaac 50997343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 300
Target Start/End: Complemental strand, 390361 - 390233
Alignment:
Q  171 accacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggacc 270  Q
    |||||||||||||| ||||||||||||||  ||| |||||||||| |  ||||||  | |  |||||||| |||| ||  |||||||||||| |||||||    
T  390361 accacagacatttgaggttaaacttaacagtcag-gatttatttggcaaacggaggaagaaatgagggaccaaaatatacgttttattaattgtgggacc 390263  T
Q  271 aaaatgaaaactgaaaattaattagaggac 300  Q
    ||||||||||||  |||||| |||| ||||    
T  390262 aaaatgaaaacttgaaattatttaggggac 390233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 232 - 300
Target Start/End: Complemental strand, 2311007 - 2310939
Alignment:
Q  232 ctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    ||||||||| ||||| |  |||||||||||| |||||||||||||||||||  ||||||||||||||||    
T  2311007 ctgagggaccaaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattaattagaggac 2310939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 146 - 282
Target Start/End: Complemental strand, 6348324 - 6348189
Alignment:
Q  146 ggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaa 245  Q
    |||||||||  ||||||  |||||||||| ||||||||| ||||||||||||| | |||| |||||||||||  || |||  |||  ||||| || ||||    
T  6348324 ggtggaccactcttaaggttggtccaccatagacatttgaggttaaacttaaccatcaga-atttatttgacaaacagaggaaaaagtgaggaaccaaaa 6348226  T
Q  246 catgagttttattaattatgggaccaaaatgaaaact 282  Q
      |  |||||||||||| |||||||||||||||||||    
T  6348225 ggtacgttttattaattgtgggaccaaaatgaaaact 6348189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 318
Target Start/End: Original strand, 54485596 - 54485663
Alignment:
Q  251 gttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    |||||||||||||||||| |||||||||||||  |||||| |||| ||||||| ||| ||||||||||    
T  54485596 gttttattaattatgggatcaaaatgaaaacttgaaattatttaggggactaagtgatctattaagcc 54485663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 237 - 318
Target Start/End: Complemental strand, 38695622 - 38695541
Alignment:
Q  237 ggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    |||| ||||||||| ||||||||  ||||||| ||||||||||| ||||||||| |||  |||| |||| ||||||||||||    
T  38695622 ggaccaaaacatgatttttattagatatgggatcaaaatgaaaattgaaaattatttaagggaccaaataacctattaagcc 38695541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 3921173 - 3921225
Alignment:
Q  242 aaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaatta 294  Q
    ||||| || ||||||||| ||||| ||||||||||||||||||||||||||||    
T  3921173 aaaacttgggttttattatttatgagaccaaaatgaaaactgaaaattaatta 3921225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 317
Target Start/End: Original strand, 34328414 - 34328494
Alignment:
Q  237 ggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagc 317  Q
    |||| ||| ||||| |||||||||||||| ||| ||||| ||| ||||||||||||||| |||| |||| || ||||||||    
T  34328414 ggaccaaagcatgaattttattaattatgagactaaaataaaatctgaaaattaattagcggaccaaataacttattaagc 34328494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 280
Target Start/End: Complemental strand, 52240136 - 52239913
Alignment:
Q  58 aagatacagtagacatgcatgatctaaccgtcctcttttaatnnnnnnngatcaaacaatttaaattaaataaattaataggatatatggtggaccaacc 157  Q
    ||||||| ||||||||||||||| |||| |   |||||||||        |||||||  ||||||||||| | ||||||||||| ||||||||||||  |    
T  52240136 aagatacggtagacatgcatgatataacggctatcttttaataaaaaaaaatcaaacggtttaaattaaaaatattaataggatctatggtggaccactc 52240037  T
Q  158 ttaagagtggtccaccacagacat--ttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagtttt 255  Q
    |||||  |||||||||| ||||||  || |||||||| |||||  |  |  ||||||||| |  ||||||| |||||||| | || ||||| |  |||||    
T  52240036 ttaaggttggtccaccatagacatcatttgggttaaagttaac-ccttggaatttatttggcaaacggagaaaaacctgaagaaccaaaacgtacgtttt 52239938  T
Q  256 attaattatgggaccaaaatgaaaa 280  Q
    ||||||| ||||| |||||| ||||    
T  52239937 attaattgtgggatcaaaataaaaa 52239913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 251 - 290
Target Start/End: Original strand, 1190243 - 1190282
Alignment:
Q  251 gttttattaattatgggaccaaaatgaaaactgaaaatta 290  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  1190243 gttttattaattatgggaccaaaatgaaaacttaaaatta 1190282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 4871342 - 4871445
Alignment:
Q  178 acatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatga 277  Q
    ||||||||| ||||| ||||||  ||| ||||||||||||  ||||||| |||| || |||||  ||||||  |||||||||||| | | ||||||||||    
T  4871342 acatttgggattaaagttaacattcagggatttatttgacaaacggagaaaaacgtgggggacttaaacatacgttttattaattgtagaaccaaaatga 4871441  T
Q  278 aaac 281  Q
    ||||    
T  4871442 aaac 4871445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 19750201 - 19750292
Alignment:
Q  107 gatcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaac 198  Q
    |||||||| ||||||||||||  |||||||||||| |||||||||| |   |||||| | |||||||| ||||||||  ||||||| |||||    
T  19750201 gatcaaacgatttaaattaaaataattaataggatctatggtggacaacttttaagatttgtccaccatagacatttaaggttaaagttaac 19750292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 19789605 - 19789514
Alignment:
Q  107 gatcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaac 198  Q
    |||||||| ||||||||||||  |||||||||||| |||||||||| |   |||||| | |||||||| ||||||||  ||||||| |||||    
T  19789605 gatcaaacgatttaaattaaaataattaataggatctatggtggacaacttttaagatttgtccaccatagacatttaaggttaaagttaac 19789514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 1794551 - 1794589
Alignment:
Q  141 tatatggtggaccaaccttaagagtggtccaccacagac 179  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  1794551 tatatggtggaccaaccttaagagtggtccaccatagac 1794589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 281
Target Start/End: Original strand, 10168702 - 10168864
Alignment:
Q  120 aaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttgggg-ttaaacttaacaaccagagatttatttgacc 218  Q
    |||||||||||||||||| | | || ||||||||| |  |||   |||||||||| |||||||||||| ||||| |||||   ||  |||||||||| |     
T  10168702 aaattaaataaattaataaggtgtacggtggaccatctataatgttggtccaccatagacatttgggggttaaagttaactgtcatggatttatttggca 10168801  T
Q  219 gacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaac 281  Q
     ||||||  |||  |||||||| |||||   | ||||||||||| ||||||||||||||||||    
T  10168802 aacggaggaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaac 10168864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 281
Target Start/End: Complemental strand, 13165668 - 13165531
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaa 242  Q
    ||||||||||||  ||||||  |||||||||| ||| |||||  |||||||||||||  ||  ||||||||||||  ||||||  |||  ||| |||| |    
T  13165668 tatggtggaccactcttaaggttggtccaccatagaaatttgaagttaaacttaacagtcaaggatttatttgacaaacggaggaaaagatgaaggacga 13165569  T
Q  243 aaacatgagttttattaattatgggaccaaaatgaaaac 281  Q
    ||||   | |||||||||||| |||||||||||||||||    
T  13165568 aaacgccatttttattaatta-gggaccaaaatgaaaac 13165531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 45535253 - 45535205
Alignment:
Q  107 gatcaaacaatttaaattaaataaattaataggatatatggtggaccaac 156  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||||||||||    
T  45535253 gatcaaacagtttaaattaaa-aaattaataggatctatggtggaccaac 45535205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 54865214 - 54865130
Alignment:
Q  206 gatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaa 291  Q
    ||||||||||||  ||||||  |||  |||||||| ||||||  | ||||||||||||||||||||||||||||||  ||||||||    
T  54865214 gatttatttgacaaacggaggaaaatgtgagggactaaaacacaa-ttttattaattatgggaccaaaatgaaaacataaaattaa 54865130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 13165635 - 13165671
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccaccacagac 179  Q
    |||||||||||||||||||||||||||||||| ||||    
T  13165635 tatggtggaccaaccttaagagtggtccaccatagac 13165671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 38555101 - 38555153
Alignment:
Q  22 aatgggatataaagttagatgttgttagttcaccgtaagatacagtagacatg 74  Q
    ||||||||||||||||||||||||||   ||||||||||||| | ||||||||    
T  38555101 aatgggatataaagttagatgttgttgactcaccgtaagataaaatagacatg 38555153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 300
Target Start/End: Original strand, 42872351 - 42872399
Alignment:
Q  252 ttttattaattatgggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    ||||||||||||||||||||||||||||| ||  |||||||||| ||||    
T  42872351 ttttattaattatgggaccaaaatgaaaaatggtaattaattaggggac 42872399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 318
Target Start/End: Complemental strand, 22069284 - 22069233
Alignment:
Q  267 gaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    ||||||||| ||||||||||||||||||| |||||||  |||| ||||||||    
T  22069284 gaccaaaataaaaactgaaaattaattaggggactaatggaccaattaagcc 22069233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 26629999 - 26629909
Alignment:
Q  107 gatcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaac 198  Q
    ||||||||| |||| ||||||  |||||||||||  ||||||||||||  ||||||  |||| ||||| | ||||||||||||||| |||||    
T  26629999 gatcaaacagtttacattaaaataattaataggacctatggtggaccactcttaag-ttggttcaccataaacatttggggttaaagttaac 26629909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 198
Target Start/End: Original strand, 27850845 - 27850938
Alignment:
Q  108 atcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacaga---catttggggttaaacttaac 198  Q
    |||||||  |||||||||||  |||||||||||| ||||||||||||   |||||  |||||||||| |||   |||||| |||||||||||||    
T  27850845 atcaaacggtttaaattaaaataattaataggatctatggtggaccacttttaaggttggtccaccatagacatcatttgaggttaaacttaac 27850938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 174
Target Start/End: Original strand, 52240018 - 52240049
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccacca 174  Q
    ||||||||||||||||||||||||||||||||    
T  52240018 tatggtggaccaaccttaagagtggtccacca 52240049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 198
Target Start/End: Complemental strand, 4871693 - 4871611
Alignment:
Q  117 tttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttg-gggttaaacttaac 198  Q
    |||||||||||  |||||||||||| || |||||||||  ||| ||  |||||||||| ||||||||| |||||||| |||||    
T  4871693 tttaaattaaaataattaataggatctacggtggaccactctttaggttggtccaccatagacatttgagggttaaagttaac 4871611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 143 - 173
Target Start/End: Original strand, 6348294 - 6348324
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccacc 173  Q
    |||||||||||||||||||||||||||||||    
T  6348294 tatggtggaccaaccttaagagtggtccacc 6348324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 141 - 179
Target Start/End: Complemental strand, 6349529 - 6349491
Alignment:
Q  141 tatatggtggaccaaccttaagagtggtccaccacagac 179  Q
    ||||||||||| |||||||||||||||||||||| ||||    
T  6349529 tatatggtggatcaaccttaagagtggtccaccatagac 6349491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 233 - 291
Target Start/End: Complemental strand, 40445448 - 40445390
Alignment:
Q  233 tgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaa 291  Q
    |||||||| ||||| | | |||||||||||||||||||| ||||||| ||| |||||||    
T  40445448 tgagggaccaaaacgtaacttttattaattatgggaccataatgaaacctgtaaattaa 40445390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 123 - 197
Target Start/End: Original strand, 56157419 - 56157493
Alignment:
Q  123 ttaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaa 197  Q
    ||||| ||||||||||||| ||||||||| ||  ||||||| ||||||||   ||||||||| ||||||| ||||    
T  56157419 ttaaaaaaattaataggatctatggtggaacactcttaagattggtccacttgagacatttgaggttaaagttaa 56157493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 282
Target Start/End: Complemental strand, 1829836 - 1829787
Alignment:
Q  233 tgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaact 282  Q
    |||||||| |||| ||  |||||||||||| |||||||||||||||||||    
T  1829836 tgagggactaaaagatacgttttattaattgtgggaccaaaatgaaaact 1829787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 20625565 - 20625622
Alignment:
Q  261 ttatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    |||||||||||||||| ||||| | ||||| ||||||||| ||||| || ||||||||    
T  20625565 ttatgggaccaaaatgtaaactcataattatttagaggaccaaatgtccaattaagcc 20625622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 23103916 - 23103964
Alignment:
Q  107 gatcaaacaatttaaattaaataaattaataggatatatggtggaccaac 156  Q
    ||||||||  ||||||||||| ||||||||||||| ||||||||||||||    
T  23103916 gatcaaacggtttaaattaaa-aaattaataggatctatggtggaccaac 23103964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 282
Target Start/End: Original strand, 27850965 - 27851014
Alignment:
Q  233 tgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaact 282  Q
    |||||||| |||| ||  |||||||||||| |||||||||||||||||||    
T  27850965 tgagggaccaaaatatacgttttattaattgtgggaccaaaatgaaaact 27851014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 31968443 - 31968492
Alignment:
Q  251 gttttattaattatgggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    |||||||||||| | ||||||||||||||| | |||||||||||| ||||    
T  31968443 gttttattaattgtaggaccaaaatgaaaaattaaaattaattaggggac 31968492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 174
Target Start/End: Original strand, 40723365 - 40723398
Alignment:
Q  141 tatatggtggaccaaccttaagagtggtccacca 174  Q
    ||||||||||||||||||||||||||||| ||||    
T  40723365 tatatggtggaccaaccttaagagtggtctacca 40723398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 49344061 - 49344110
Alignment:
Q  251 gttttattaattatgggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    |||||||||||| |||||||||||| ||| || ||||||| |||||||||    
T  49344061 gttttattaattgtgggaccaaaataaaagcttaaaattatttagaggac 49344110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 49896408 - 49896484
Alignment:
Q  22 aatgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaaccgtcctcttttaat 99  Q
    ||||| |||| ||||||| |||| || || ||| |||||||||| ||||||||||||||||||  || ||||||||||    
T  49896408 aatggtatattaagttagttgtt-ttggtccactgtaagatacaatagacatgcatgatctaatggttctcttttaat 49896484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 259 - 327
Target Start/End: Original strand, 1521253 - 1521321
Alignment:
Q  259 aattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcccaacttttt 327  Q
    |||||||||| ||||||||||||   |||||| ||||||||| ||| | || |||||||| ||||||||    
T  1521253 aattatgggatcaaaatgaaaacaacaaattagttagaggaccaaaagtccaattaagcctaacttttt 1521321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 303
Target Start/End: Complemental strand, 3921123 - 3921088
Alignment:
Q  267 gaccaaaatgaaaactgaaaattaattagaggactaa 303  Q
    |||||||||||||||||||||||||||| ||||||||    
T  3921123 gaccaaaatgaaaactgaaaattaatta-aggactaa 3921088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 4714160 - 4714196
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccaccacagac 179  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  4714160 tatggtggatcaaccttaagagtggtccaccatagac 4714196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 266 - 318
Target Start/End: Complemental strand, 13531195 - 13531143
Alignment:
Q  266 ggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    |||||||||||||||||  ||||||||||  || | |||||||||||||||||    
T  13531195 ggaccaaaatgaaaacttgaaattaattaagggtccaaatgacctattaagcc 13531143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 13531826 - 13531754
Alignment:
Q  187 gttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttatta 259  Q
    |||||| |||||| | |||||||| ||||||||||||||| | |  | | |||| ||||||||||||||||||    
T  13531826 gttaaatttaacagcgagagatttttttgaccgacggagagacaattaaaggaccaaaacatgagttttatta 13531754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 280
Target Start/End: Complemental strand, 42871234 - 42871131
Alignment:
Q  176 agacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaat 275  Q
    ||||||||||  ||||||||||||  ||| |||||||||| |  ||||||  |||  |||||||| ||||| |  |||||||||||| ||||| ||||||    
T  42871234 agacatttggaattaaacttaacagtcag-gatttatttggcaaacggaggaaaaagtgagggaccaaaacgtacgttttattaattgtgggatcaaaat 42871136  T
Q  276 gaaaa 280  Q
    |||||    
T  42871135 gaaaa 42871131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 5e-45; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 120 - 316
Target Start/End: Complemental strand, 8521449 - 8521255
Alignment:
Q  120 aaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccg 219  Q
    ||||||||||| |||||||||| ||||||||||||  ||||||  |||||||||| | ||||||||||||||| |||||   | | |||||||||||| |    
T  8521449 aaattaaataa-ttaataggatctatggtggaccattcttaaggttggtccaccatacacatttggggttaaagttaaccgtcgg-gatttatttgactg 8521352  T
Q  220 acggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaag 316  Q
    ||||||| |||| |||||||| |||||||||||||||||| ||||||||||||||||||||||  ||||||||||  |||| |||||||||||||||    
T  8521351 acggagacaaacgtgagggaccaaaacatgagttttattagttatgggaccaaaatgaaaacttgaaattaattaagggaccaaatgacctattaag 8521255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 120 - 318
Target Start/End: Original strand, 1010286 - 1010482
Alignment:
Q  120 aaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccg 219  Q
    ||||||||||| |||||||||| ||||| ||||||  ||||||  |||||||||| | ||||||||||||||| |||||   | | |||||||||||| |    
T  1010286 aaattaaataa-ttaataggatctatggcggaccactcttaaggttggtccaccatacacatttggggttaaagttaaccgtcgg-gatttatttgactg 1010383  T
Q  220 acggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    ||||||| |||| |||||||| |||||||||||||||||| ||||||||||||||| ||||||  ||||||||||  |||| |||||||||||||||||    
T  1010384 acggagacaaacgtgagggaccaaaacatgagttttattagttatgggaccaaaataaaaacttgaaattaattaagggaccaaatgacctattaagcc 1010482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 165 - 315
Target Start/End: Complemental strand, 32757976 - 32757826
Alignment:
Q  165 tggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattat 264  Q
    |||||||||| ||||||||||||||||| |||||| |||  |||||||||||||| ||||| | ||| |||||||| |||||||||||||||||| ||||    
T  32757976 tggtccaccatagacatttggggttaaagttaacacccatggatttatttgaccggcggaggtgaacttgagggaccaaaacatgagttttattatttat 32757877  T
Q  265 gggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaa 315  Q
    ||||||||||||||||||| |||||| ||   |||| ||||||||||||||    
T  32757876 gggaccaaaatgaaaactggaaattatttgagggaccaaatgacctattaa 32757826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 206 - 318
Target Start/End: Original strand, 8523752 - 8523864
Alignment:
Q  206 gatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaat 305  Q
    |||||||||||| |||||||| |||| ||| |||  |||||||||||||||||| ||||||||||||||||||||||  ||||||||||| |||| ||||    
T  8523752 gatttatttgactgacggagacaaacatgaaggatcaaaacatgagttttattagttatgggaccaaaatgaaaacttgaaattaattaggggaccaaat 8523851  T
Q  306 gacctattaagcc 318  Q
    |||||||||||||    
T  8523852 gacctattaagcc 8523864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 130 - 318
Target Start/End: Complemental strand, 1009371 - 1009182
Alignment:
Q  130 aattaataggatatatggtggaccaaccttaagagtggtccaccacagacattt---ggggttaaacttaacaaccagagatttatttgaccgacggaga 226  Q
    |||||||||||| ||||||||||||  ||||||  |||||||||| | ||||||   ||||| ||| ||||| | || ||||||||||||| || |||||    
T  1009371 aattaataggatctatggtggaccactcttaaggttggtccaccata-acattttggggggtaaaagttaactatca-agatttatttgactgatggaga 1009274  T
Q  227 taaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
     |||| ||| | || |||||||||||||||||| |||||| |||||||||||||||  ||||||||||| | || |||||||||||||||||    
T  1009273 caaacatgaagaaccaaaacatgagttttattagttatggaaccaaaatgaaaacttgaaattaattagggaaccaaatgacctattaagcc 1009182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 206 - 318
Target Start/End: Original strand, 32759054 - 32759166
Alignment:
Q  206 gatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaat 305  Q
    |||||||||||||||||||| | ||| |||||||| |||||||||||||||||| |||||| || |||||||||||||||||||| ||   |||| ||||    
T  32759054 gatttatttgaccgacggaggtgaacttgagggaccaaaacatgagttttattatttatggaactaaaatgaaaactgaaaattatttgagggaccaaat 32759153  T
Q  306 gacctattaagcc 318  Q
    |||||||||||||    
T  32759154 gacctattaagcc 32759166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 143 - 327
Target Start/End: Original strand, 22308742 - 22308926
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaa 242  Q
    ||||||||||||  ||||||   ||||||||| ||||||||||||||||||||||||||||  |||||||||| |  ||||||  |||  |||||||| |    
T  22308742 tatggtggaccactcttaaggtaggtccaccatagacatttggggttaaacttaacaaccatggatttatttggcaaacggagcaaaatgtgagggacta 22308841  T
Q  243 aaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcccaacttttt 327  Q
    ||||    |||||||||||||||||||||||||||||||   |||||| |||| |||| ||| || ||| |||||| || |||||    
T  22308842 aaacgcctgttttattaattatgggaccaaaatgaaaacatgaaattatttaggggaccaaacgatctaataagcctaaattttt 22308926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 108 - 318
Target Start/End: Complemental strand, 9169793 - 9169584
Alignment:
Q  108 atcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagaga 207  Q
    |||||||  |||||||| || ||||||||| | | |||| ||||||| |  ||| | |||||||| | ||||||||||||||||| |||||  | || ||    
T  9169793 atcaaactgtttaaatttaa-aaattaatacggtctatgatggaccatctataatattggtccactatagacatttggggttaaagttaacttc-aggga 9169696  T
Q  208 tttatttgaccgacggagataaacctgagggacaaaaacat-gagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatg 306  Q
    ||||||||||||||||||| | |  | |  ||| ||||||| ||||||||||||||||||||| ||||||||||||  ||||||||||  || | |||||    
T  9169695 tttatttgaccgacggagagacaattaaaagaccaaaacatagagttttattaattatgggactaaaatgaaaacttgaaattaattaaggggccaaatg 9169596  T
Q  307 acctattaagcc 318  Q
    ||||||||||||    
T  9169595 acctattaagcc 9169584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 108 - 294
Target Start/End: Complemental strand, 22047942 - 22047754
Alignment:
Q  108 atcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacat---ttggggttaaacttaacaaccag 204  Q
    |||||||  |||||||||||  |||| ||||||| ||||||||||||  ||||||  || ||||||| ||||||   || | ||||||||||||| ||||    
T  22047942 atcaaacggtttaaattaaaataattcataggatttatggtggaccactcttaaggttgatccaccatagacatcatttagagttaaacttaacagccag 22047843  T
Q  205 agatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaatta 294  Q
     |||||||||| |  ||||||  |||  |||||||| ||||| |  |||||||||||| |||||||||||||||||||  ||||||||||    
T  22047842 -gatttatttggcaaacggaggaaaaaatgagggaccaaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattaatta 22047754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 233 - 315
Target Start/End: Complemental strand, 26047896 - 26047814
Alignment:
Q  233 tgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaa 315  Q
    |||||||| |||||||||||||||||| ||||| ||||||||| |||| |  |||||||||||||||| ||||||||||||||    
T  26047896 tgagggactaaaacatgagttttattagttatgagaccaaaataaaaatttgaaattaattagaggaccaaatgacctattaa 26047814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 176 - 303
Target Start/End: Original strand, 22049113 - 22049239
Alignment:
Q  176 agacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaat 275  Q
    |||||||||||||||||||||||| | || |||||||||| |  || |||  |||  |||||||| ||||| |  |||||||||||||||||||||||||    
T  22049113 agacatttggggttaaacttaacagc-agggatttatttgccaaacagaggaaaaagtgagggaccaaaacgtacgttttattaattatgggaccaaaat 22049211  T
Q  276 gaaaactgaaaattaattagaggactaa 303  Q
    |||||||  |||||| |||| |||||||    
T  22049212 gaaaacttgaaattatttaggggactaa 22049239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 205 - 300
Target Start/End: Complemental strand, 30857911 - 30857816
Alignment:
Q  205 agatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    |||||||||||||  | ||||  ||| |||| |||| |||||||  |||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  30857911 agatttatttgacaaaaggaggaaaatctgaaggaccaaaacatacgttttattaattgtgggaccaaaatgaaaacttaaaattaattagaggac 30857816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 108 - 282
Target Start/End: Original strand, 30859078 - 30859254
Alignment:
Q  108 atcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacaga---catttggggttaaacttaacaaccag 204  Q
    |||||||  |||||||||||  |||||||||||| ||||||||||||  ||||||| |||||||||| |||   ||||||||||||||||||||   ||     
T  30859078 atcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaagattggtccaccatagacatcatttggggttaaacttaacggtca- 30859176  T
Q  205 agatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaact 282  Q
    ||| ||||||| |  || |||  |||  ||||||||  |||| |  |||||||||||| |||||||||||||||||||    
T  30859177 agacttatttggcaaacagaggaaaatgtgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaact 30859254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 108 - 282
Target Start/End: Complemental strand, 39604063 - 39603887
Alignment:
Q  108 atcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacaga---catttggggttaaacttaacaaccag 204  Q
    |||||||| |||||||||||  |||||||||||| ||||||||| ||   |||||  ||||| |||| |||   |||||||||||||||||||||  ||     
T  39604063 atcaaacagtttaaattaaaataattaataggatctatggtggatcacttttaaggttggtctaccatagacatcatttggggttaaacttaacagtca- 39603965  T
Q  205 agatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaact 282  Q
     |||||||||| |  ||||||  |||  |||||||| ||||| |  |||||||||||| ||||| |||||||||||||    
T  39603964 tgatttatttggcaaacggaggaaaatttgagggaccaaaacgtacgttttattaattgtgggatcaaaatgaaaact 39603887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 27262710 - 27262648
Alignment:
Q  23 atgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaac 85  Q
    ||||||||||| | ||||||||||| |||||| |||||||||||| |||||||||||||||||    
T  27262710 atgggatataatgctagatgttgttggttcacagtaagatacagtggacatgcatgatctaac 27262648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 206 - 300
Target Start/End: Original strand, 39605475 - 39605569
Alignment:
Q  206 gatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    |||||||||| |  ||||||  ||| ||||||||| ||||| |  |||||||||||| |||||||||||||||||||  ||||||||||||||||    
T  39605475 gatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttttattaattgtgggaccaaaatgaaaacttgaaattaattagaggac 39605569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 233 - 318
Target Start/End: Original strand, 10978312 - 10978397
Alignment:
Q  233 tgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    ||||||||  |||| || ||||||||| |||| ||||||||||||||| || ||||||||||| |||| |||||| ||||||||||    
T  10978312 tgagggaccgaaacgtgggttttattatttataggaccaaaatgaaaattggaaattaattaggggaccaaatgatctattaagcc 10978397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 107 - 199
Target Start/End: Complemental strand, 1102827 - 1102735
Alignment:
Q  107 gatcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaaca 199  Q
    ||||||||  |||||||||||  |||||||| ||| ||||||||||||  ||||||  ||||| |||| ||||||||||||||||| ||||||    
T  1102827 gatcaaacggtttaaattaaaataattaataagatctatggtggaccactcttaaggttggtctaccatagacatttggggttaaagttaaca 1102735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 211 - 318
Target Start/End: Complemental strand, 10977127 - 10977020
Alignment:
Q  211 atttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacct 310  Q
    ||||||| ||||||  ||||  ||||||||  |||| || ||||||||| |||| ||||||| ||||||| || ||||||||||| |||  |||||||||    
T  10977127 atttgactgacggacgtaaaattgagggaccgaaacgtgggttttattagttataggaccaagatgaaaattgcaaattaattaggggatcaaatgacct 10977028  T
Q  311 attaagcc 318  Q
    ||||||||    
T  10977027 attaagcc 10977020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 318
Target Start/End: Original strand, 20539253 - 20539463
Alignment:
Q  107 gatcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagag 206  Q
    ||||||||  ||||||||||| ||||||||| | | |||| | ||||| |   || | |||||||||  | | |||||| ||||||||||||   ||  |    
T  20539253 gatcaaacggtttaaattaaaaaaattaataaggtctatgatagaccacctacaatattggtccaccttatatatttggtgttaaacttaacggacacgg 20539352  T
Q  207 atttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatg 306  Q
    |||| ||||||  |||||||| ||| |||| |||  |||||||| ||| |||||| |||||||||||||||||| | |||||||||||| |||| |||      
T  20539353 atttttttgacatacggagatgaacttgagtgaccgaaacatgacttt-attaataatgggaccaaaatgaaaatttaaaattaattaggggaccaaaaa 20539451  T
Q  307 acctattaagcc 318  Q
    | ||||||||||    
T  20539452 atctattaagcc 20539463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 252 - 318
Target Start/End: Complemental strand, 20538117 - 20538051
Alignment:
Q  252 ttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    ||||||||||||||||||||||||||||| |  ||||||||||| |||| |||  ||||||||||||    
T  20538117 ttttattaattatgggaccaaaatgaaaatttgaaattaattaggggaccaaaaaacctattaagcc 20538051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 28393505 - 28393443
Alignment:
Q  23 atgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaac 85  Q
    ||||||||||| | ||||||||||| |||||  |||||||||||| |||||||||||||||||    
T  28393505 atgggatataatgctagatgttgttggttcagagtaagatacagtggacatgcatgatctaac 28393443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 31171144 - 31171082
Alignment:
Q  23 atgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaac 85  Q
    ||||||||||| |  |||||||||| |||||| |||||||||||| |||||||||||||||||    
T  31171144 atgggatataatgcgagatgttgttggttcacagtaagatacagtggacatgcatgatctaac 31171082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 143 - 281
Target Start/End: Original strand, 33173903 - 33174041
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaa 242  Q
    |||||| |||||  ||||||  |||||||||| |||||||||||||||||||||||| |||  |||||||||| |  || |||  |||  |||||||| |    
T  33173903 tatggtagaccactcttaaggttggtccaccatagacatttggggttaaacttaacagccaaggatttatttggcaaacagaggaaaaggtgagggacta 33174002  T
Q  243 aaacatgagttttattaattatgggaccaaaatgaaaac 281  Q
    ||||   | ||||||||| | ||||| ||||||||||||    
T  33174003 aaacgccatttttattaaatgtgggatcaaaatgaaaac 33174041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 117 - 300
Target Start/End: Original strand, 4127170 - 4127353
Alignment:
Q  117 tttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttga 216  Q
    |||||||||||| |||||| ||||| ||||||||||||   |||||| || || | || ||||||||||||||||| |||||  | ||||| || || ||    
T  4127170 tttaaattaaattaattaacaggatctatggtggaccacttttaagattgatctatcatagacatttggggttaaagttaacggcaagagactttttaga 4127269  T
Q  217 ccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    |  ||||||  ||   ||| |||| ||||| | | |||||  | |||||||||||||||||||||   |||||| |||||||||    
T  4127270 ctaacggagcaaacgttgaaggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaacaaattacttagaggac 4127353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 9170944 - 9170986
Alignment:
Q  252 ttttattaattatgggaccaaaatgaaaactgaaaattaatta 294  Q
    |||| ||||||||| ||||||||||||||||||||||||||||    
T  9170944 tttttttaattatgagaccaaaatgaaaactgaaaattaatta 9170986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 281
Target Start/End: Complemental strand, 30910939 - 30910776
Alignment:
Q  120 aaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacaga---catttggggttaaacttaacaaccagagatttatttga 216  Q
    ||||||||  |||||||||||| ||||||||||||  ||||||  |||||||||| |||   ||||||| |||||| ||||||  | ||||||||||||     
T  30910939 aaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccaaagacatcatttggtgttaaagttaacagtc-gagatttatttgg 30910841  T
Q  217 ccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaac 281  Q
       || |||  |||  |||||||| |||||   | ||||||||||| ||||||||||||||||||    
T  30910840 taaacagaggaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaac 30910776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 34899003 - 34899045
Alignment:
Q  252 ttttattaattatgggaccaaaatgaaaactgaaaattaatta 294  Q
    |||||||| |||||||||||||||||||| |||||||||||||    
T  34899003 ttttattacttatgggaccaaaatgaaaaatgaaaattaatta 34899045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 41874267 - 41874209
Alignment:
Q  27 gatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaac 85  Q
    ||||||| | ||||||||||| |||||| |||||||||||| || ||||||||||||||    
T  41874267 gatataatgctagatgttgttggttcacagtaagatacagtggatatgcatgatctaac 41874209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 165 - 282
Target Start/End: Original strand, 325151 - 325267
Alignment:
Q  165 tggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattat 264  Q
    |||||||||| |||||||| | |||||| ||||||  | | |||||||||| |  ||||||  |||| |||||||| ||||  |  |||||||||||| |    
T  325151 tggtccaccatagacatttagagttaaagttaacagtcgg-gatttatttggcaaacggaggaaaacttgagggaccaaaaggtacgttttattaattgt 325249  T
Q  265 gggaccaaaatgaaaact 282  Q
    ||||||||||||||||||    
T  325250 gggaccaaaatgaaaact 325267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 165 - 318
Target Start/End: Original strand, 30912128 - 30912280
Alignment:
Q  165 tggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattat 264  Q
    |||||||||| ||| |||||| |||||| |||||| |  | |||||||||| |  ||||||| |||  |||||||| |||||   | ||||||||||| |    
T  30912128 tggtccaccatagatatttggagttaaagttaaca-cttgggatttatttggcaaacggagaaaaaggtgagggactaaaacgccacttttattaattgt 30912226  T
Q  265 gggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    |||||||||||||||||   ||||||| ||  |||||||| || ||| ||||||    
T  30912227 gggaccaaaatgaaaacatgaaattaaataagggactaaacgatctaataagcc 30912280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 223517 - 223465
Alignment:
Q  22 aatgggatataaagttagatgttgttagttcaccgtaagatacagtagacatg 74  Q
    ||||||||||||||||||||||||||   ||||||||||||| | ||||||||    
T  223517 aatgggatataaagttagatgttgttgactcaccgtaagataaaatagacatg 223465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 174
Target Start/End: Original strand, 1009325 - 1009356
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccacca 174  Q
    ||||||||||||||||||||||||||||||||    
T  1009325 tatggtggaccaaccttaagagtggtccacca 1009356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 174
Target Start/End: Original strand, 11262533 - 11262564
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccacca 174  Q
    ||||||||||||||||||||||||||||||||    
T  11262533 tatggtggaccaaccttaagagtggtccacca 11262564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 11796650 - 11796567
Alignment:
Q  235 agggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    |||||| |||| ||||||||||  | |||||||||||||||| ||||| | ||||| |||| |||| ||||| || ||||||||    
T  11796650 agggaccaaaatatgagttttacaatttatgggaccaaaatgtaaactcataattatttaggggaccaaatgtccaattaagcc 11796567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 182
Target Start/End: Complemental strand, 22308775 - 22308736
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccaccacagacatt 182  Q
    ||||||||||| |||||||||||||||||||| |||||||    
T  22308775 tatggtggacctaccttaagagtggtccaccatagacatt 22308736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 23325980 - 23325910
Alignment:
Q  248 tgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    |||||||||  | |||||||||||||||| ||||| | ||||| ||||||||| ||||| || ||||||||    
T  23325980 tgagttttacaacttatgggaccaaaatgtaaactcataattatttagaggaccaaatgtccaattaagcc 23325910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 23334028 - 23334085
Alignment:
Q  261 ttatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    |||||||||||||||| ||||| | ||||| ||||||||| ||||| || ||||||||    
T  23334028 ttatgggaccaaaatgtaaactcataattatttagaggaccaaatgtccaattaagcc 23334085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 27705223 - 27705296
Alignment:
Q  108 atcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacat 181  Q
    |||||||  ||||||||||| | ||||||||||| ||||||||||||   |||||  |||||||||| ||||||    
T  27705223 atcaaacggtttaaattaaaaatattaataggatctatggtggaccacttttaaggttggtccaccatagacat 27705296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 174
Target Start/End: Original strand, 30910885 - 30910914
Alignment:
Q  145 tggtggaccaaccttaagagtggtccacca 174  Q
    ||||||||||||||||||||||||||||||    
T  30910885 tggtggaccaaccttaagagtggtccacca 30910914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 11262321 - 11262277
Alignment:
Q  251 gttttattaattatgggaccaaaatgaaaactgaaaattaattag 295  Q
    |||||||||||| |||||| |||||||||||| ||||||| ||||    
T  11262321 gttttattaattgtgggactaaaatgaaaacttaaaattatttag 11262277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 22307591 - 22307543
Alignment:
Q  233 tgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaac 281  Q
    |||||||| ||||||   |||||||||||||||| ||||||||||||||    
T  22307591 tgagggactaaaacacctgttttattaattatggaaccaaaatgaaaac 22307543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 179
Target Start/End: Complemental strand, 33173936 - 33173900
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccaccacagac 179  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  33173936 tatggtggaccaaccttaagagtggtctaccatagac 33173900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 2e-44; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 107 - 318
Target Start/End: Complemental strand, 35903716 - 35903506
Alignment:
Q  107 gatcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagag 206  Q
    ||||||||  |||||||||||  | |||||||||| ||||||||||||  || || |||  || | || |||||||||||||||||||||||| |||  |    
T  35903716 gatcaaacggtttaaattaaaatatttaataggatctatggtggaccactctaaa-agtaatctatcatagacatttggggttaaacttaacagccaagg 35903618  T
Q  207 atttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatg 306  Q
    ||||||||||| |||||||||| |  |||||||| ||||||||| |||||||| ||||||||||||||||||||||  |||||||||| ||||| |||||    
T  35903617 atttatttgactgacggagatataattgagggaccaaaacatgacttttattagttatgggaccaaaatgaaaacttgaaattaattaaaggaccaaatg 35903518  T
Q  307 acctattaagcc 318  Q
    ||||||||||||    
T  35903517 acctattaagcc 35903506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 165 - 318
Target Start/End: Complemental strand, 34147287 - 34147134
Alignment:
Q  165 tggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattat 264  Q
    |||||||||| ||||||||||||||||| |||||| |||  |||||||||||| | ||||| | ||| |||||||| |||||||||||||||||| ||||    
T  34147287 tggtccaccatagacatttggggttaaagttaacacccatggatttatttgactggcggaggtgaacttgagggaccaaaacatgagttttattacttat 34147188  T
Q  265 gggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    |||||||||||||||||||||||||| ||   |||| |||||||||||||||||    
T  34147187 gggaccaaaatgaaaactgaaaattatttgagggaccaaatgacctattaagcc 34147134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 107 - 318
Target Start/End: Original strand, 34513460 - 34513671
Alignment:
Q  107 gatcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagag 206  Q
    ||||||||  ||||||||||| ||||||||| | | ||||||||| ||  ||||||  ||||| |||| | |||||||||||||| |||||| ||||| |    
T  34513460 gatcaaacggtttaaattaaaaaaattaataaggtctatggtggatcactcttaaggttggtcaaccatatacatttggggttaagcttaacgaccaggg 34513559  T
Q  207 atttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatg 306  Q
    | |||||||||  ||||||  ||||| ||| |||  |||||||||||||||||||||||| ||||||||||||| ||  |||||||||| |||| |||||    
T  34513560 aattatttgactaacggaggcaaacccgagagacctaaacatgagttttattaattatggaaccaaaatgaaaattggtaattaattaggggaccaaatg 34513659  T
Q  307 acctattaagcc 318  Q
    ||||||||||||    
T  34513660 acctattaagcc 34513671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 107 - 314
Target Start/End: Complemental strand, 34464177 - 34463970
Alignment:
Q  107 gatcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagag 206  Q
    ||||||||| ||||||||||| ||  ||||| | | ||||||||||||  ||||||  ||||| || | ||||||||||||||||||||||||  |||||    
T  34464177 gatcaaacagtttaaattaaaaaatctaataaggtctatggtggaccactcttaaggttggtcaacgatagacatttggggttaaacttaacagtcagag 34464078  T
Q  207 atttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatg 306  Q
    ||||||||||   ||||||  |||||||| |||| |||| ||  ||||||||||||||   ||||||||||||||||  |||||||||| |||| |||||    
T  34464077 atttatttgattaacggaggcaaacctgatggaccaaaagatttgttttattaattatcaaaccaaaatgaaaactggtaattaattaggggaccaaatg 34463978  T
Q  307 acctatta 314  Q
    || |||||    
T  34463977 acatatta 34463970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 165 - 290
Target Start/End: Original strand, 2277434 - 2277559
Alignment:
Q  165 tggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattat 264  Q
    |||||||||| ||||||||||||||||| |||||  |||  |||||||||||||||| ||| | ||| |||||||| ||||||| |||||||||| ||||    
T  2277434 tggtccaccatagacatttggggttaaagttaactcccatggatttatttgaccgactgaggtgaacttgagggaccaaaacataagttttattacttat 2277533  T
Q  265 gggaccaaaatgaaaactgaaaatta 290  Q
    ||||||||||||||||||| ||||||    
T  2277534 gggaccaaaatgaaaactggaaatta 2277559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 206 - 318
Target Start/End: Original strand, 34148366 - 34148478
Alignment:
Q  206 gatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaat 305  Q
    |||||||||||||||||||| | ||| |||||||| |||||||||||||||||| |||||| || |||||||||||||||||||| ||   |||| ||||    
T  34148366 gatttatttgaccgacggaggtgaacttgagggaccaaaacatgagttttattatttatggaactaaaatgaaaactgaaaattatttgagggaccaaat 34148465  T
Q  306 gacctattaagcc 318  Q
    |||||||||||||    
T  34148466 gacctattaagcc 34148478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 108 - 315
Target Start/End: Complemental strand, 34513020 - 34512815
Alignment:
Q  108 atcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagaga 207  Q
    |||||| | ||||||||||| || |||||| | ||||||||||||||  |||| |  || ||||||| | |||||  || ||||||||||||  ||  ||    
T  34513020 atcaaatagtttaaattaaaaaatttaataaggtatatggtggaccactcttatggttgatccaccatatacattaagg-ttaaacttaacagtcat-ga 34512923  T
Q  208 tttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatga 307  Q
    ||||||||||  ||||||  |||  |||||||  ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| |||| |    
T  34512922 tttatttgactaacggaggcaaatttgagggatcaaaacatgagttttattaattatgggaccaaaatgaaaactggtaattaattaggggaccaaataa 34512823  T
Q  308 cctattaa 315  Q
    ||||||||    
T  34512822 cctattaa 34512815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 30749155 - 30749224
Alignment:
Q  30 ataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaaccgtcctcttttaat 99  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  30749155 ataaagttagatgttgttggttcaccgtaagatacagtagacatgcatgatctaacggtcctcttttaat 30749224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 206 - 318
Target Start/End: Complemental strand, 2276391 - 2276279
Alignment:
Q  206 gatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaat 305  Q
    ||||||||||||| |||||| | ||| |||||||| |||||||||||||||||| |||| |||| |||||||||||||||||||| ||   |||| ||||    
T  2276391 gatttatttgacctacggaggtgaacttgagggaccaaaacatgagttttattacttataggactaaaatgaaaactgaaaattatttgagggaccaaat 2276292  T
Q  306 gacctattaagcc 318  Q
    |||||||||||||    
T  2276291 gacctattaagcc 2276279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 168 - 315
Target Start/End: Original strand, 7753494 - 7753640
Alignment:
Q  168 tccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatggg 267  Q
    ||||||| | |||||||| |||||| |||||| ||| ||||||||| ||||||||  || | |  | |||||||||||||||||||| |||||||||||     
T  7753494 tccaccatatacatttggagttaaagttaacacccaaagatttattagaccgacgaggagacaattaagggacaaaaacatgagtttaattaattatgg- 7753592  T
Q  268 accaaaatgaaaactgaaaattaattagaggactaaatgacctattaa 315  Q
    ||||||||||||| |  ||||||||||| |||| ||||||||||||||    
T  7753593 accaaaatgaaaatttgaaattaattaggggaccaaatgacctattaa 7753640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 28 - 217
Target Start/End: Complemental strand, 30748766 - 30748578
Alignment:
Q  28 atataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaaccgtcctcttttaatnnnnnnngatcaaacaatttaaattaaa 127  Q
    ||||||||||||||||||||  |||||| ||||||| | |||||||||||||  ||||  ||||||||||||       |||||||||||||||||||||    
T  30748766 atataaagttagatgttgttgattcaccataagatatactagacatgcatgaattaacgatcctcttttaataaaaaa-gatcaaacaatttaaattaaa 30748668  T
Q  128 taaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttgac 217  Q
      |||||||| ||| |||||||  |||  ||||||  | || ||||||| | ||||| |||||||||||||||  |||||||||||||||    
T  30748667 ataattaatatgatctatggtgtgccactcttaaggtttgttcaccacaaatatttgaggttaaacttaacaattagagatttatttgac 30748578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 35061339 - 35061269
Alignment:
Q  248 tgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  35061339 tgagttttattagttatgggaccaaaatgaaaactgaaaattaattaggggattaaatgacctattaagcc 35061269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 206 - 316
Target Start/End: Complemental strand, 33996057 - 33995948
Alignment:
Q  206 gatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaat 305  Q
    ||||||||||||||||||||  |||  | |||||| |||||||||||||||||| |||| |||| |||||||||||| |||||||||||  |||| ||||    
T  33996057 gatttatttgaccgacggagggaaaattaagggactaaaacatgagttttattagttat-ggacaaaaatgaaaacttaaaattaattaagggaccaaat 33995959  T
Q  306 gacctattaag 316  Q
    |||||||||||    
T  33995958 gacctattaag 33995948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 117 - 282
Target Start/End: Complemental strand, 43033280 - 43033116
Alignment:
Q  117 tttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttga 216  Q
    |||||||||||  |||||||||| | ||||||||||||  ||||||  ||||| |||| ||||||||| |||||||||||||| | || ||||||||||     
T  43033280 tttaaattaaaataattaatagggtttatggtggaccactcttaaggttggtctaccatagacatttgaggttaaacttaacatcgag-gatttatttgg 43033182  T
Q  217 ccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaact 282  Q
    |  ||||||  |||  |||||||| ||||  |  |||||||||||| |||||||||||||||||||    
T  43033181 caaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgggaccaaaatgaaaact 43033116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 237 - 318
Target Start/End: Original strand, 35904780 - 35904861
Alignment:
Q  237 ggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    |||| |||||||||||||||||| ||||||| |||||||||||| |  |||||| ||| |||||||||||||||||||||||    
T  35904780 ggaccaaaacatgagttttattacttatggggccaaaatgaaaattagaaattatttaaaggactaaatgacctattaagcc 35904861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 235 - 295
Target Start/End: Original strand, 30749328 - 30749388
Alignment:
Q  235 agggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattag 295  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  30749328 agggaccaaaacatgagttttattaattatgggactaaaatgaaaactggaaattaattag 30749388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 108 - 295
Target Start/End: Complemental strand, 34467714 - 34467527
Alignment:
Q  108 atcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagaga 207  Q
    |||||||| ||||||||||| || |||||| | | ||||||||||||  ||||||  | ||||| || |||||||||  |||||||| |||| |||| ||    
T  34467714 atcaaacagtttaaattaaaaaacttaataaggtttatggtggaccactcttaaggtttgtccatcatagacatttgaagttaaactcaacagccaggga 34467615  T
Q  208 tttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattag 295  Q
    |||||||| |   | |||  ||||||||||||    |  |||||||||||||||||||| |||||||| |||||||  ||||||||||    
T  34467614 tttatttgcctagcagaggcaaacctgagggatcgcacaatgagttttattaattatggtaccaaaataaaaactggtaattaattag 34467527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 294
Target Start/End: Complemental strand, 37957084 - 37956971
Alignment:
Q  180 atttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaa 279  Q
    |||||||||||||||||| |  ||| ||||| ||||||||||||||| | |  | |||||| ||||||||| |||||||| |||||||||||||||||||    
T  37957084 atttggggttaaacttaatattcag-gatttctttgaccgacggagagacaattaagggaccaaaacatgaattttattacttatgggaccaaaatgaaa 37956986  T
Q  280 actgaaaattaatta 294  Q
    | |  ||||||||||    
T  37956985 atttgaaattaatta 37956971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 168 - 300
Target Start/End: Complemental strand, 11316080 - 11315949
Alignment:
Q  168 tccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatggg 267  Q
    ||||||| ||||||||||  |||||||||||| || | |||||||||| |  ||||||  |||||||||||||  |||| |  |||||||||||| ||||    
T  11316080 tccaccatagacatttggaattaaacttaacagccgg-gatttatttggcaaacggaggaaaacctgagggacttaaacgtacgttttattaattgtggg 11315982  T
Q  268 accaaaatgaaaactgaaaattaattagaggac 300  Q
    |||||||||||||||  |||||| |||| ||||    
T  11315981 accaaaatgaaaacttgaaattatttaggggac 11315949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 120 - 318
Target Start/End: Original strand, 18616924 - 18617124
Alignment:
Q  120 aaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacaga---catttggggttaaacttaacaaccagagatttatttga 216  Q
    ||||||||  |||||||||||| ||||||||||||   |||||| |||||||||| |||   |||||||||||||||||||  |   | ||||||||||     
T  18616924 aaattaaaataattaataggatctatggtggaccacttttaagactggtccaccatagacatcatttggggttaaacttaa-tagttgggatttatttgg 18617022  T
Q  217 ccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaag 316  Q
    |  ||||||  |||  |||||||| |||||   | ||||||||||| ||||||||||||||||||   ||||||| || ||||| |||||| ||| ||||    
T  18617023 caaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaataaaggaccaaatgatctaataag 18617122  T
Q  317 cc 318  Q
    ||    
T  18617123 cc 18617124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 120 - 318
Target Start/End: Complemental strand, 29219583 - 29219383
Alignment:
Q  120 aaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacaga---catttggggttaaacttaacaaccagagatttatttga 216  Q
    ||||||||  |||||||||||| ||||||||||||   |||||| |||||||||| |||   |||||||||||||||||||| |   | ||||||||||     
T  29219583 aaattaaaataattaataggatctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaac-agttgggatttatttgg 29219485  T
Q  217 ccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaag 316  Q
    |  ||||||  |||  |||||||| |||||   | ||||||||||| ||||||||||||||||||   ||||||| || ||||| ||| || ||| ||||    
T  29219484 caaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaataaaggaccaaacgatctaataag 29219385  T
Q  317 cc 318  Q
    ||    
T  29219384 cc 29219383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 120 - 318
Target Start/End: Complemental strand, 29332882 - 29332682
Alignment:
Q  120 aaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacaga---catttggggttaaacttaacaaccagagatttatttga 216  Q
    ||||||||  |||||||||||| ||||||||||||   |||||| |||||||||| |||   |||||||||||||||||||| |   | ||||||||||     
T  29332882 aaattaaaataattaataggatctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaac-agttgggatttatttgg 29332784  T
Q  217 ccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaag 316  Q
    |  ||||||  |||  |||||||| |||||   | ||||||||||| ||||||||||||||||||   ||||||| || ||||| ||| || ||| ||||    
T  29332783 caaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaataaaggaccaaacgatctaataag 29332684  T
Q  317 cc 318  Q
    ||    
T  29332683 cc 29332682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 168 - 303
Target Start/End: Original strand, 32470544 - 32470678
Alignment:
Q  168 tccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatggg 267  Q
    ||||||| |||||||||| ||||||||||||| || | ||||||||||||  ||||||  |||| ||||| ||  |||| |  |||||||||||| ||||    
T  32470544 tccaccatagacatttggagttaaacttaacagccgg-gatttatttgacaaacggaggaaaacatgaggaacttaaacgtacgttttattaattgtggg 32470642  T
Q  268 accaaaatgaaaactgaaaattaattagaggactaa 303  Q
    |||||||| ||||||  |||||| |||| |||||||    
T  32470643 accaaaataaaaacttgaaattatttaggggactaa 32470678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 235 - 318
Target Start/End: Original strand, 35061351 - 35061433
Alignment:
Q  235 agggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    |||||| ||||| |||||||||||| |||||| |||||||||||||||  ||||||||||  |||| |||||||||||||||||    
T  35061351 agggactaaaacgtgagttttattagttatgg-accaaaatgaaaacttcaaattaattaagggaccaaatgacctattaagcc 35061433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 2384312 - 2384374
Alignment:
Q  23 atgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaac 85  Q
    ||||||||||| | ||||||||||| |||||| |||||||||||| |||||||||||||||||    
T  2384312 atgggatataatgctagatgttgttggttcacagtaagatacagtggacatgcatgatctaac 2384374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 300
Target Start/End: Complemental strand, 11547795 - 11547675
Alignment:
Q  179 catttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaa 278  Q
    |||||||||||||||||||||  ||| ||||||||||||  ||| ||  |||  ||||||   |||||||| ||||||||||||||| ||||||||||||    
T  11547795 catttggggttaaacttaacagtcag-gatttatttgacaaacgaaggaaaaaatgaggggttaaaacatgtgttttattaattatgagaccaaaatgaa 11547697  T
Q  279 aactgaaaattaattagaggac 300  Q
    ||||  |||||| ||| |||||    
T  11547696 aacttgaaattatttaaaggac 11547675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 318
Target Start/End: Original strand, 9474103 - 9474170
Alignment:
Q  251 gttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    |||| |||| |||| ||| ||||||||||| |||||||||||||| |||| |||||||||||||||||    
T  9474103 gtttcattatttataggaacaaaatgaaaattgaaaattaattaggggaccaaatgacctattaagcc 9474170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 36214999 - 36215057
Alignment:
Q  27 gatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaac 85  Q
    ||||||| | ||||||||||| |||||| |||||||||||| |||||||||||||||||    
T  36214999 gatataatgctagatgttgttggttcacagtaagatacagtggacatgcatgatctaac 36215057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 17460717 - 17460784
Alignment:
Q  233 tgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    |||||||| ||||| |  |||||||||||| ||||| |||||||||||||  ||||||||||||||||    
T  17460717 tgagggaccaaaacgtacgttttattaattgtgggatcaaaatgaaaacttgaaattaattagaggac 17460784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 165 - 280
Target Start/End: Original strand, 28562775 - 28562889
Alignment:
Q  165 tggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattat 264  Q
    |||||||||| | | ||||||| ||||||||||||  | | ||||||||||||  ||||||  |||  |||||||| ||||  |  ||||||||||||||    
T  28562775 tggtccaccatatatatttgggattaaacttaacagtctg-gatttatttgacaaacggaggaaaaagtgagggaccaaaaggtatgttttattaattat 28562873  T
Q  265 gggaccaaaatgaaaa 280  Q
    ||||||||||||||||    
T  28562874 gggaccaaaatgaaaa 28562889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 40323225 - 40323163
Alignment:
Q  23 atgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaac 85  Q
    ||||||||||| | || |||||||| |||||| |||||||||||  |||||||||||||||||    
T  40323225 atgggatataatgctatatgttgttggttcacagtaagatacagccgacatgcatgatctaac 40323163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 233 - 318
Target Start/End: Complemental strand, 9472707 - 9472622
Alignment:
Q  233 tgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    ||||||||  |||| || ||||||| | |||| |||||||||| |||| || ||||||||||| |||  |||||||||||||||||    
T  9472707 tgagggaccgaaacgtgggttttataagttataggaccaaaataaaaattgcaaattaattaggggatcaaatgacctattaagcc 9472622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 128 - 282
Target Start/End: Original strand, 43034398 - 43034553
Alignment:
Q  128 taaattaataggatatatggtggaccaaccttaagagtggtccaccacagacattt--ggggttaaacttaacaaccagagatttatttgaccgacggag 225  Q
    |||||||||||||| ||||||||||||  |||||   || ||||||| ||||||||  | |||||||||||||| | | |||||||||||||  ||||||    
T  43034398 taaattaataggatctatggtggaccactcttaaagttgatccaccatagacatttgagaggttaaacttaacagcga-agatttatttgacaaacggag 43034496  T
Q  226 ataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaact 282  Q
      |||  |||||||| ||||  |  |||||||||||| || ||  ||||||||||||    
T  43034497 gaaaaagtgagggaccaaaaggtacgttttattaattgtgagattaaaatgaaaact 43034553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 290
Target Start/End: Complemental strand, 28561518 - 28561394
Alignment:
Q  167 gtccaccacagacatttggggttaaacttaacaaccagaga-tttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatg 265  Q
    |||||||| ||| ||||| | ||||||||||||  || ||| ||||||||||  ||| ||  |||  |||||||| |||| ||  |||||||||||| ||    
T  28561518 gtccaccatagatatttgagattaaacttaacagtcaaagaatttatttgacaaacgtaggaaaaggtgagggaccaaaagatacgttttattaattgtg 28561419  T
Q  266 ggaccaaaatgaaaactgaaaatta 290  Q
     |||||||||||||||| |||||||    
T  28561418 agaccaaaatgaaaacttaaaatta 28561394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 295
Target Start/End: Complemental strand, 16289832 - 16289798
Alignment:
Q  261 ttatgggaccaaaatgaaaactgaaaattaattag 295  Q
    ||||| |||||||||||||||||||||||||||||    
T  16289832 ttatgagaccaaaatgaaaactgaaaattaattag 16289798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 42641767 - 42641841
Alignment:
Q  107 gatcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacat 181  Q
    ||||||||| |||||||||||  |||||||||||| |||||| |||||  ||||||  ||| |||||| ||||||    
T  42641767 gatcaaacagtttaaattaaaataattaataggatctatggtagaccactcttaaggttggcccaccatagacat 42641841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 282
Target Start/End: Original strand, 7437794 - 7437843
Alignment:
Q  233 tgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaact 282  Q
    |||||||| |||| ||  |||||||||||| |||||||||||||||||||    
T  7437794 tgagggaccaaaatatacgttttattaattgtgggaccaaaatgaaaact 7437843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 179 - 303
Target Start/End: Complemental strand, 17459389 - 17459266
Alignment:
Q  179 catttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaa 278  Q
    ||||||||||||||||||| |  |||| ||||||||| |  ||||||  |||  ||||||||  |||| |  |||||||||||| || ||||||||||||    
T  17459389 catttggggttaaacttaaaagtcaga-atttatttggcaaacggaggaaaaagtgagggacttaaacgtacgttttattaattgtgtgaccaaaatgaa 17459291  T
Q  279 aactgaaaattaattagaggactaa 303  Q
    ||||  |||||| |||  |||||||    
T  17459290 aacttgaaattatttaagggactaa 17459266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 8e-44; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 120 - 318
Target Start/End: Complemental strand, 38696504 - 38696306
Alignment:
Q  120 aaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccg 219  Q
    |||||| | ||||||||  ||| ||||||||||||   |||||  ||||| |||| |||||||| ||||||||||||| | | || ||||||||||||||    
T  38696504 aaattataaaaattaattagatctatggtggaccacttttaaggttggtctaccatagacatttagggttaaacttaatagcaagggatttatttgaccg 38696405  T
Q  220 acggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    ||||||  |||| |||||||| |||||||||||||||||| ||||| |||||||||||||||| |||||||||||| |||| ||||| |||||||||||    
T  38696404 acggaggcaaacttgagggaccaaaacatgagttttattagttatgagaccaaaatgaaaacttaaaattaattaggggaccaaatggcctattaagcc 38696306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 120 - 318
Target Start/End: Complemental strand, 42877813 - 42877617
Alignment:
Q  120 aaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccg 219  Q
    ||||||||||| |||||||||| ||||||||||||  ||||||  |||||||||| | ||||||||||||||| |||||   | | |||||||||||| |    
T  42877813 aaattaaataa-ttaataggatctatggtggaccattcttaaggttggtccaccatacacatttggggttaaagttaaccgtcgg-gatttatttgactg 42877716  T
Q  220 acggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    ||| ||| |||| |||||||| |||||||||||||||||| ||||| ||||||||||||||||  ||||||||||   ||| |||| ||||||||||||    
T  42877715 acgaagacaaacgtgagggaccaaaacatgagttttattagttatgagaccaaaatgaaaacttgaaattaattaagagaccaaataacctattaagcc 42877617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 180 - 318
Target Start/End: Original strand, 45437462 - 45437600
Alignment:
Q  180 atttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaa 279  Q
    ||||||||||||||||||||  ||| ||||||||||||   |||||  ||||  ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  45437462 atttggggttaaacttaacagtcagggatttatttgactagcggaggcaaacacgagggaccaaaacatgagttttattaattatgggatcaaaatgaaa 45437561  T
Q  280 actgaaaattaattagaggactaaatgacctattaagcc 318  Q
    |||  ||||||||||| |||  |||||||||||||||||    
T  45437562 acttgaaattaattaggggatcaaatgacctattaagcc 45437600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 108 - 315
Target Start/End: Original strand, 14840807 - 14841014
Alignment:
Q  108 atcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagaga 207  Q
    |||||||  ||||||||||| || |||||| ||  ||||||||| ||   ||||   |||||||||| ||||||||| |||||||||||| ||| |||||    
T  14840807 atcaaacggtttaaattaaaaaatttaataagaactatggtggatcacttttaatgttggtccaccatagacatttgtggttaaacttaagaacgagaga 14840906  T
Q  208 tttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatga 307  Q
    |||||||||  |||||||| |||  |||||||| ||||||||| |||||||| |||||| ||||||||||||| |  |||||||| | | ||| |||| |    
T  14840907 tttatttgatagacggagacaaatatgagggaccaaaacatgaattttattagttatggtaccaaaatgaaaatttgaaattaatcaaaagaccaaataa 14841006  T
Q  308 cctattaa 315  Q
    ||||||||    
T  14841007 cctattaa 14841014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 182 - 318
Target Start/End: Original strand, 41743597 - 41743733
Alignment:
Q  182 ttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaac 281  Q
    |||| |||||||||||||    ||||||| ||||||||||||||| | |  | | |||| ||||||| |||||||||| |||||||||||||||||||||    
T  41743597 ttggagttaaacttaacagtgtgagatttttttgaccgacggagaaacaattaaaggaccaaaacataagttttattacttatgggaccaaaatgaaaac 41743696  T
Q  282 tgaaaattaattagaggactaaatgacctattaagcc 318  Q
    | ||||||||||| ||||| |||||||||||||||||    
T  41743697 ttaaaattaattaaaggaccaaatgacctattaagcc 41743733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 206 - 318
Target Start/End: Original strand, 38697012 - 38697124
Alignment:
Q  206 gatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaat 305  Q
    ||||||||||||||||||||  |||  ||| |||  |||||||||||||||||| ||||||||||||||||||||||| |||||||||   |||| ||||    
T  38697012 gatttatttgaccgacggaggcaaatgtgaaggatcaaaacatgagttttattagttatgggaccaaaatgaaaactggaaattaattgagggaccaaat 38697111  T
Q  306 gacctattaagcc 318  Q
    || ||||||||||    
T  38697112 gagctattaagcc 38697124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 318
Target Start/End: Original strand, 42878859 - 42878934
Alignment:
Q  243 aaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    |||||||||||| |||| ||||||||||||||||||||||  ||||||||||| |||| |||||||||||||||||    
T  42878859 aaacatgagtttcattagttatgggaccaaaatgaaaacttgaaattaattaggggaccaaatgacctattaagcc 42878934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 165 - 320
Target Start/End: Complemental strand, 45395118 - 45394963
Alignment:
Q  165 tggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattat 264  Q
    |||||||||| ||| |||||| |||||| |||||   ||| ||||||||||| |||| |||| | |  | ||  || |||||||||||||||||||||||    
T  45395118 tggtccaccatagatatttggagttaaagttaaccgtcagggatttatttgatcgacagagagacaattaagtaaccaaaacatgagttttattaattat 45395019  T
Q  265 gggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagccca 320  Q
    |||| ||||||||||||| |||||||||||  |||  |||||| ||||||| ||||    
T  45395018 gggatcaaaatgaaaacttaaaattaattaagggatcaaatgatctattaaaccca 45394963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 107 - 280
Target Start/End: Original strand, 8571523 - 8571697
Alignment:
Q  107 gatcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaaca-accaga 205  Q
    ||||||||| ||||||||||| |  |||||| | ||||||||||||||   ||||   |||||||||| |||||||||||||||||||||||| || ||     
T  8571523 gatcaaacagtttaaattaaaaagtttaataaggtatatggtggaccatttttaaagttggtccaccatagacatttggggttaaacttaacagactagg 8571622  T
Q  206 gatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaa 280  Q
    ||||||||||    ||||||| |||  ||| |||| ||||| |  |||||||||||| |  ||||||||||||||    
T  8571623 gatttatttggtaaacggagaaaaaaatgaaggaccaaaacgtacgttttattaattgtatgaccaaaatgaaaa 8571697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 107 - 282
Target Start/End: Original strand, 32798438 - 32798614
Alignment:
Q  107 gatcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacat--ttggggttaaacttaacaaccag 204  Q
    ||||||||  |||||||||||  |||||||||||| ||||||||||||  ||||||  || ||||||| ||||||  || | ||||||||||||    ||    
T  32798438 gatcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaaggttgatccaccatagacatcatttgagttaaacttaaccgtgag 32798537  T
Q  205 agatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaact 282  Q
     ||||||||||||  ||||||| |||  |||||||| ||||  |  |||||||||||| |||||||||||||||||||    
T  32798538 -gatttatttgacaaacggagaaaaaattgagggactaaaaggtacgttttattaattgtgggaccaaaatgaaaact 32798614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 168 - 294
Target Start/End: Original strand, 17702241 - 17702369
Alignment:
Q  168 tccaccacagacatttggggttaaacttaacaaccagagatttattt--gaccgacggagataaacctgagggacaaaaacatgagttttattaattatg 265  Q
    ||||||| ||||||||| ||||||| |||||   ||||||||| |||  |||  | |||||| ||| |||||||| |||||||  ||||||||| |||||    
T  17702241 tccaccatagacatttgaggttaaagttaacggtcagagatttctttttgacaaatggagatgaacttgagggaccaaaacataggttttattagttatg 17702340  T
Q  266 ggaccaaaatgaaaactgaaaattaatta 294  Q
    ||||||||||||||| || ||||||||||    
T  17702341 ggaccaaaatgaaaattggaaattaatta 17702369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 176 - 318
Target Start/End: Complemental strand, 28735130 - 28734986
Alignment:
Q  176 agacatttggggttaaacttaacaaccagagatttatttgaccgacgg--agataaacctgagggacaaaaacatgagttttattaattatgggaccaaa 273  Q
    |||||||||||||||||||||| |  |  ||||||||||||| |||||  ||| ||    | | ||| ||||||||||||||||||||||||| ||||||    
T  28735130 agacatttggggttaaacttaatagtctcagatttatttgactgacgggaagacaattaagtgagaccaaaacatgagttttattaattatggaaccaaa 28735031  T
Q  274 atgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    ||||| ||| ||||||||||||   |  |||||||||||||||||    
T  28735030 atgaacacttaaaattaattaggaaatcaaatgacctattaagcc 28734986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 108 - 198
Target Start/End: Original strand, 32695181 - 32695274
Alignment:
Q  108 atcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacaga---catttggggttaaacttaac 198  Q
    |||||||  |||||||||||  |||||||||||| ||||||||||||| ||||||| |||| ||||| |||   ||||||||||||||||||||    
T  32695181 atcaaacggtttaaattaaaataattaataggatctatggtggaccaatcttaagattggttcaccatagacatcatttggggttaaacttaac 32695274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 50 - 290
Target Start/End: Original strand, 42872041 - 42872279
Alignment:
Q  50 ttcaccgtaagatacagtagacatgcatgatctaaccgtcctcttttaatnnnnnnngatcaaacaatttaaattaaataaattaataggatatatggtg 149  Q
    ||||| |||||||||| ||||||||||||||||||| |||||  ||||||       |||| ||    ||| |||||| ||||||||||||| ||||||     
T  42872041 ttcacagtaagatacaatagacatgcatgatctaacagtcctactttaatacaaaaggatcgaatgggttatattaaa-aaattaataggatctatggta 42872139  T
Q  150 gaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatg 249  Q
    |||||  ||||||  ||||| |||| ||||||||| ||||||| |||||   ||| ||||||||||||  ||||||  |||  ||| |||| ||||| |     
T  42872140 gaccactcttaaggttggtctaccatagacatttgaggttaaagttaaccgtcag-gatttatttgacaaacggaggaaaaagtgaaggactaaaacgta 42872238  T
Q  250 agttttattaattatgggaccaaaatgaaaactgaaaatta 290  Q
     |||||||| |||||| ||  |||||||||||| |||||||    
T  42872239 cgttttattcattatgagattaaaatgaaaacttaaaatta 42872279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 416395 - 416457
Alignment:
Q  23 atgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaac 85  Q
    ||||||||||| | ||||||||||| |||||| |||||||||||| |||||||||||||||||    
T  416395 atgggatataatgctagatgttgttggttcacagtaagatacagtggacatgcatgatctaac 416457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 1659129 - 1659191
Alignment:
Q  23 atgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaac 85  Q
    ||||||||||| | ||||||||||| |||||| |||||||||||| |||||||||||||||||    
T  1659129 atgggatataatgctagatgttgttggttcacagtaagatacagtggacatgcatgatctaac 1659191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 6337076 - 6337138
Alignment:
Q  23 atgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaac 85  Q
    ||||||||||| | ||||||||||| |||||| |||||||||||| |||||||||||||||||    
T  6337076 atgggatataatgctagatgttgttggttcacagtaagatacagtggacatgcatgatctaac 6337138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 14030610 - 14030548
Alignment:
Q  23 atgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaac 85  Q
    ||||||||||| | ||||||||||| |||||| |||||||||||| |||||||||||||||||    
T  14030610 atgggatataatgctagatgttgttggttcacagtaagatacagtggacatgcatgatctaac 14030548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 165 - 295
Target Start/End: Original strand, 26697798 - 26697927
Alignment:
Q  165 tggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattat 264  Q
    |||||||||| | |||||||||||||||||||||||  || |||||||| |||  | |||   |||  |||||||| ||||| |  ||||||||||||||    
T  26697798 tggtccaccataaacatttggggttaaacttaacaattag-gatttattcgacaaaaggaagaaaaagtgagggactaaaacgtacgttttattaattat 26697896  T
Q  265 gggaccaaaatgaaaactgaaaattaattag 295  Q
    ||||| |||||||||| |||||| |||||||    
T  26697897 gggactaaaatgaaaaatgaaaaataattag 26697927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 36803099 - 36803161
Alignment:
Q  23 atgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaac 85  Q
    ||||||||||| | ||||||||||| |||||| |||||||||||| |||||||||||||||||    
T  36803099 atgggatataatgctagatgttgttggttcacagtaagatacagtggacatgcatgatctaac 36803161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 154
Target Start/End: Complemental strand, 37401072 - 37400942
Alignment:
Q  23 atgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaaccgtcctcttttaatnnnnnnngatcaaacaatttaaa 122  Q
    ||||||||||| | ||||||||||| |||||| ||||||||||||  ||||||||||||||||  |||| | || ||       ||||||||  |||| |    
T  37401072 atgggatataatgctagatgttgttggttcacagtaagatacagtgaacatgcatgatctaacaatcct-tctttattaaaaaagatcaaacggtttata 37400974  T
Q  123 ttaaataaattaataggatatatggtggacca 154  Q
    ||||| ||||||||||||| ||||||||||||    
T  37400973 ttaaaaaaattaataggatctatggtggacca 37400942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 58 - 280
Target Start/End: Complemental strand, 4810723 - 4810505
Alignment:
Q  58 aagatacagtagacatgcatgatctaaccgtcctcttttaatnnnnnnngatcaaacaatttaaattaaataaattaataggatatatggtggaccaacc 157  Q
    |||||||| |||| ||| ||||||||||  ||||||||||||       ||||||||| ||||||||||| | ||||||||||| ||||||||||||  |    
T  4810723 aagatacaatagatatgtatgatctaacgatcctcttttaataaaaaa-gatcaaacagtttaaattaaaaatattaataggatctatggtggaccactc 4810625  T
Q  158 ttaagagtggtccaccacaga---catttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttt 254  Q
    ||||      ||||||| |||   |||||||||||||| |||||   | | |||||||||| |  ||||||| |||  ||| |||| |||||||  ||||    
T  4810624 ttaa-----ttccaccatagacatcatttggggttaaagttaaccgtc-gggatttatttggcaaacggagaaaaatttgaaggaccaaaacatacgttt 4810531  T
Q  255 tattaattatgggaccaaaatgaaaa 280  Q
    ||||||||||||||||||||| ||||    
T  4810530 tattaattatgggaccaaaataaaaa 4810505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 32693895 - 32693846
Alignment:
Q  251 gttttattaattatgggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  32693895 gttttattaattgtgggaccaaaatgaaaacttaaaattaattagaggac 32693846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 141
Target Start/End: Original strand, 34504525 - 34504615
Alignment:
Q  50 ttcaccgtaagatacagtagacatgcatgatctaaccgtcctcttttaatnnnnnnngatcaaacaatttaaattaaataaattaataggat 141  Q
    |||||||||||||| |||||||||||||||||||||  ||||||||||||       ||||||| | ||||||||||| |||||||||||||    
T  34504525 ttcaccgtaagatatagtagacatgcatgatctaacgatcctcttttaat-aaaaaagatcaaagagtttaaattaaaaaaattaataggat 34504615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 28420178 - 28420254
Alignment:
Q  204 gagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaa 280  Q
    ||||||||||||||  ||||||  |||  |||||||| ||||| || ||||||||||||||||||||||||||||||    
T  28420178 gagatttatttgacaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaa 28420254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 24192571 - 24192662
Alignment:
Q  108 atcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaaca 199  Q
    |||||||  ||| |||||||  |||||||||||| ||||||||||||  ||||||  |||||||||| |||||||| |||||||| ||||||    
T  24192571 atcaaacggttttaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccatagacatttagggttaaagttaaca 24192662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 233 - 295
Target Start/End: Original strand, 34504673 - 34504735
Alignment:
Q  233 tgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattag 295  Q
    |||||||| |||||||| ||||||||| ||||| ||| ||||| |||||||||||||||||||    
T  34504673 tgagggaccaaaacatgtgttttattagttatgagactaaaataaaaactgaaaattaattag 34504735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 58 - 173
Target Start/End: Original strand, 45281047 - 45281161
Alignment:
Q  58 aagatacagtagacatgcatgatctaaccgtcctcttttaatnnnnnnngatcaaacaatttaaattaaataaattaataggatatatggtggaccaacc 157  Q
    ||||||||||||||||||||||||||||  || |||||||||       ||||||||  ||||||||||| | ||||||||||| |||||| |||||  |    
T  45281047 aagatacagtagacatgcatgatctaacgttcatcttttaat-aaaaaagatcaaacggtttaaattaaaaatattaataggatttatggtagaccactc 45281145  T
Q  158 ttaagagtggtccacc 173  Q
    |||||  |||||||||    
T  45281146 ttaaggttggtccacc 45281161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 243 - 292
Target Start/End: Original strand, 45396060 - 45396109
Alignment:
Q  243 aaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaat 292  Q
    |||| |||||||| ||| ||||||||||||||||||||||||||||||||    
T  45396060 aaacgtgagtttttttagttatgggaccaaaatgaaaactgaaaattaat 45396109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 280
Target Start/End: Original strand, 212688 - 212792
Alignment:
Q  176 agacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaat 275  Q
    ||||||||||||||||| |||||| ||| |||||||||||||  ||| ||  |||  |||||||| ||||||   ||||| |||||| |||||| |||||    
T  212688 agacatttggggttaaagttaacacccatagatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaat 212787  T
Q  276 gaaaa 280  Q
    |||||    
T  212788 gaaaa 212792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 280
Target Start/End: Complemental strand, 239566 - 239462
Alignment:
Q  176 agacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaat 275  Q
    ||||||||||||||||| |||||| ||| |||||||||||||  ||| ||  |||  |||||||| ||||||   ||||| |||||| |||||| |||||    
T  239566 agacatttggggttaaagttaacacccatagatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaat 239467  T
Q  276 gaaaa 280  Q
    |||||    
T  239466 gaaaa 239462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 280
Target Start/End: Original strand, 726311 - 726415
Alignment:
Q  176 agacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaat 275  Q
    ||||||||||||||||| |||||| ||| |||||||||||||  ||| ||  |||  |||||||| ||||||   ||||| |||||| |||||| |||||    
T  726311 agacatttggggttaaagttaacacccatagatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaat 726410  T
Q  276 gaaaa 280  Q
    |||||    
T  726411 gaaaa 726415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 280
Target Start/End: Complemental strand, 792921 - 792817
Alignment:
Q  176 agacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaat 275  Q
    ||||||||||||||||| |||||| ||| |||||||||||||  ||| ||  |||  |||||||| ||||||   ||||| |||||| |||||| |||||    
T  792921 agacatttggggttaaagttaacacccatagatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaat 792822  T
Q  276 gaaaa 280  Q
    |||||    
T  792821 gaaaa 792817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 280
Target Start/End: Original strand, 798812 - 798916
Alignment:
Q  176 agacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaat 275  Q
    ||||||||||||||||| |||||| ||| |||||||||||||  ||| ||  |||  |||||||| ||||||   ||||| |||||| |||||| |||||    
T  798812 agacatttggggttaaagttaacacccatagatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaat 798911  T
Q  276 gaaaa 280  Q
    |||||    
T  798912 gaaaa 798916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 282
Target Start/End: Complemental strand, 22551155 - 22551041
Alignment:
Q  167 gtccaccacagacatttggggttaaacttaacaa-ccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatg 265  Q
    |||||||| ||| ||||||||||||||||||||| |||| |||||||||| |  | ||||| |||  |||||||| |||| ||  |||||||||||| ||    
T  22551155 gtccaccatagagatttggggttaaacttaacaatccag-gatttatttggcaaatggagaaaaag-tgagggaccaaaagatacgttttattaattgtg 22551058  T
Q  266 ggaccaaaatgaaaact 282  Q
    |||||||||| ||||||    
T  22551057 ggaccaaaataaaaact 22551041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 280
Target Start/End: Complemental strand, 28418918 - 28418842
Alignment:
Q  204 gagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaa 280  Q
    |||||||||||| |  ||||||  |||  |||||||| ||||| || ||||||||||||||||||||||||||||||    
T  28418918 gagatttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaa 28418842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 31845702 - 31845792
Alignment:
Q  107 gatcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaac 198  Q
    ||||||||| |||| ||||||  |||||||||||  ||||||||||||  ||||||  |||| ||||| ||||||||||||||||| |||||    
T  31845702 gatcaaacagtttacattaaaataattaataggacctatggtggaccactcttaag-ttggttcaccatagacatttggggttaaagttaac 31845792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 120 - 281
Target Start/End: Complemental strand, 42098760 - 42098598
Alignment:
Q  120 aaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacaga---catttggggttaaacttaacaaccagagatttatttga 216  Q
    ||||||||  |||||||||||| ||||||||||||   |||||  |||||||||| |||   |||||||||||||| ||||||  |   ||||||||||     
T  42098760 aaattaaagtaattaataggatctatggtggaccacttttaaggttggtccaccaaagacatcatttggggttaaaattaacagtc--ggatttatttgg 42098663  T
Q  217 ccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaac 281  Q
    |  ||||||| |||| || ||||  |||||   | ||||||||||| ||||||||||||||||||    
T  42098662 caaacggagacaaacgtgggggatcaaaacgccacttttattaattgtgggaccaaaatgaaaac 42098598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 199
Target Start/End: Original strand, 10669362 - 10669444
Alignment:
Q  117 tttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaaca 199  Q
    |||||||||||  | |||||||||| ||||||||||||  ||||||  |||| ||||| ||||||||| ||||||| ||||||    
T  10669362 tttaaattaaaatatttaataggatctatggtggaccactcttaaggttggttcaccatagacatttgaggttaaagttaaca 10669444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 30787652 - 30787690
Alignment:
Q  252 ttttattaattatgggaccaaaatgaaaactgaaaatta 290  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  30787652 ttttattaattatgggaccaaaatgaaaacttaaaatta 30787690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 26696597 - 26696548
Alignment:
Q  251 gttttattaattatgggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    |||||||||||| |||||||||||||||||||  ||||||||||| ||||    
T  26696597 gttttattaattgtgggaccaaaatgaaaacttgaaattaattaggggac 26696548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 265 - 314
Target Start/End: Original strand, 45396113 - 45396162
Alignment:
Q  265 gggaccaaaatgaaaactgaaaattaattagaggactaaatgacctatta 314  Q
    |||||||||||||||| |||||||||||| | |||| |||||||||||||    
T  45396113 gggaccaaaatgaaaattgaaaattaattgggggaccaaatgacctatta 45396162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 280
Target Start/End: Complemental strand, 6397981 - 6397819
Alignment:
Q  117 tttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttga 216  Q
    ||||||||||| ||||||||| | | ||||||||||||   | |||  ||||  |||| ||  |||||| |||||| ||||||  ||  ||||||||||     
T  6397981 tttaaattaaaaaaattaataaggtctatggtggaccactgtaaaggttggtttaccatagttatttggagttaaatttaacattcat-gatttatttgg 6397883  T
Q  217 ccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaa 280  Q
    |  ||||||| |||  |||||||| ||||  | ||||||||||||| |||||||||||||||||    
T  6397882 caaacggagaaaaaaatgagggactaaaatgtaagttttattaattgtgggaccaaaatgaaaa 6397819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 174
Target Start/End: Complemental strand, 24192639 - 24192608
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccacca 174  Q
    ||||||||||||||||||||||||||||||||    
T  24192639 tatggtggaccaaccttaagagtggtccacca 24192608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 296
Target Start/End: Complemental strand, 41742178 - 41742087
Alignment:
Q  205 agatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattaga 296  Q
    |||||||||||||||| | | | |||  |||||||| ||||||| | |||||||||||||   || ||||||||||||  ||||||||||||    
T  41742178 agatttatttgaccgatgaaaacaaatgtgagggaccaaaacataaattttattaattataaaactaaaatgaaaacttgaaattaattaga 41742087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 187
Target Start/End: Original strand, 9854796 - 9854866
Alignment:
Q  117 tttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttgggg 187  Q
    ||||||||| |  |||||||||||| ||||||||||||  |||||   |||||||||| ||||||||||||    
T  9854796 tttaaattagaagaattaataggatctatggtggaccactcttaaagttggtccaccatagacatttgggg 9854866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 32797226 - 32797172
Alignment:
Q  228 aaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaact 282  Q
    |||||||||||||  |||| |  |||||||||||| |||||||||||||||||||    
T  32797226 aaacctgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaact 32797172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 198
Target Start/End: Complemental strand, 43202304 - 43202214
Alignment:
Q  108 atcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaac 198  Q
    |||||||| |||||||| ||  || ||||||||| ||||||||||||  ||||||  || ||||| | ||| ||||||||||||| |||||    
T  43202304 atcaaacagtttaaatttaaataactaataggatctatggtggaccactcttaaggttgatccactatagatatttggggttaaaattaac 43202214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 281
Target Start/End: Original strand, 13117685 - 13117714
Alignment:
Q  252 ttttattaattatgggaccaaaatgaaaac 281  Q
    ||||||||||||||||||||||||||||||    
T  13117685 ttttattaattatgggaccaaaatgaaaac 13117714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 26696759 - 26696718
Alignment:
Q  58 aagatacagtagacatgcatgatctaaccgtcctcttttaat 99  Q
    |||||||||||||||||||| |||||||  ||||||||||||    
T  26696759 aagatacagtagacatgcataatctaacgatcctcttttaat 26696718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 300
Target Start/End: Complemental strand, 28291352 - 28291311
Alignment:
Q  259 aattatgggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    |||||||||||||||||||||||||| ||||| |||| ||||    
T  28291352 aattatgggaccaaaatgaaaactgataattacttaggggac 28291311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 180 - 280
Target Start/End: Original strand, 6398478 - 6398577
Alignment:
Q  180 atttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaa 279  Q
    |||| |||||||||||||||  ||  ||||||||||||  ||||||  |||  |||||||| |||||    ||||||||||||||| |||||||||||||    
T  6398478 atttagggttaaacttaacagtcat-gatttatttgacaaacggaggaaaaaatgagggactaaaacgcttgttttattaattatgagaccaaaatgaaa 6398576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 42870878 - 42870834
Alignment:
Q  251 gttttattaattatgggaccaaaatgaaaactgaaaattaattag 295  Q
    |||||||||||| |||||||||||||||||||  |||||| ||||    
T  42870878 gttttattaattgtgggaccaaaatgaaaacttgaaattatttag 42870834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 81; Significance: 7e-38; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 27 - 312
Target Start/End: Complemental strand, 32862 - 32576
Alignment:
Q  27 gatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaaccgtcctcttttaat-nnnnnnngatcaaacaatttaaatt- 124  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||  |||||||||||||        ||||||||  ||||||||     
T  32862 gatataaagttagatgttgttggtttaccgtaagatacagtagacatgcatgatctaatggtcctcttttaataaaaaaaagatcaaacggtttaaatta 32763  T
Q  125 -aaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacgg 223  Q
     ||| ||| ||||||||| |||| |||||||  | ||||  |||||||||| ||||||||  ||||||| ||||||   || |||||||||| |||| ||    
T  32762 aaaaaaaaataataggatctatgatggaccactcctaaggttggtccaccatagacatttaaggttaaagttaacagttag-gatttatttggccgatgg 32664  T
Q  224 agataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctat 312  Q
    ||| |||| || || || |||||| ||||||||||| ||||| ||||||||| ||||||  ||||||||||  |||| |||| ||||||    
T  32663 agacaaacatg-ggcaccaaaacacgagttttattagttatgtgaccaaaataaaaacttgaaattaattacgggaccaaataacctat 32576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1251 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold1251
Description:

Target: scaffold1251; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 165 - 318
Target Start/End: Original strand, 1050 - 1203
Alignment:
Q  165 tggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattat 264  Q
    |||||||||| ||||||||||||||||| |||||| |||   ||||||||||| ||||||| | ||  |||||||| |||||||||||||||||| ||||    
T  1050 tggtccaccatagacatttggggttaaagttaacacccatgaatttatttgactgacggaggtgaatttgagggaccaaaacatgagttttattacttat 1149  T
Q  265 gggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    ||||||||||||||||||| |||||| ||   |||| |||||||||||||||||    
T  1150 gggaccaaaatgaaaactggaaattatttgagggaccaaatgacctattaagcc 1203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 2e-28; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 24 - 297
Target Start/End: Complemental strand, 12670015 - 12669742
Alignment:
Q  24 tgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaaccgtcctcttttaatnnnnnnngatcaaacaatttaaat 123  Q
    |||||||||| |||||||| |||| |||||   ||||||| ||||||||||||||||||||  |||||| ||||||       ||||||| | |||| ||    
T  12670015 tgggatataatgttagatgatgttggttcagattaagatatagtagacatgcatgatctaatagtcctcctttaataaaaaaagatcaaatagtttatat 12669916  T
Q  124 taaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacgg 223  Q
    |||  ||| ||||| ||| ||||||||||||  ||||||  |||||||||| | ||||||| ||||||| ||||||   ||||||||||||  |  ||||    
T  12669915 taataaaaataatatgatctatggtggaccactcttaaggttggtccaccatacacatttgaggttaaagttaacagttagagatttatttagcaaacgg 12669816  T
Q  224 agataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagag 297  Q
    ||  |||  ||| |||| ||||| ||||||||||||||| || ||||||||| |||| | || |||| ||||||    
T  12669815 aggaaaaagtgacggactaaaacttgagttttattaattgtgagaccaaaataaaaatttaatattatttagag 12669742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 165 - 300
Target Start/End: Complemental strand, 7310426 - 7310292
Alignment:
Q  165 tggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattat 264  Q
    |||| ||||| |||||||||| ||||||||||||| || ||||||||||||    ||||||| |||||||| ||||  ||||||  ||||||||||||||    
T  7310426 tggttcaccatagacatttggagttaaacttaacagcc-gagatttatttggtaaacggagaaaaacctgaaggacttaaacatacgttttattaattat 7310328  T
Q  265 gggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    |||||||||||||||||| ||||||| ||| |||||    
T  7310327 gggaccaaaatgaaaacttaaaattatttaaaggac 7310292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 244 - 318
Target Start/End: Original strand, 7308491 - 7308565
Alignment:
Q  244 aacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    |||||||||||||||| |||| |||||||||||||||||  ||||||||||  || | |||||||||||||||||    
T  7308491 aacatgagttttattacttataggaccaaaatgaaaacttgaaattaattaaggggccaaatgacctattaagcc 7308565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 13847746 - 13847807
Alignment:
Q  23 atgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaa 84  Q
    ||||||||||| | ||||||||||| |||||| |||||||||||| ||||||||||||||||    
T  13847746 atgggatataatgctagatgttgttggttcacagtaagatacagtggacatgcatgatctaa 13847807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 312
Target Start/End: Complemental strand, 34093485 - 34093387
Alignment:
Q  206 gatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaat 305  Q
    ||||||||||||||||||| | ||||||||||||| |||||||||||||||||        ||| ||||| ||||||  ||||||||||| |||| ||||    
T  34093485 gatttatttgaccgacggaaacaaacctgagggaccaaaacatgagttttatt--------gacaaaaataaaaacttgaaattaattaggggaccaaat 34093394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 32506967 - 32507107
Alignment:
Q  141 tatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggac 240  Q
    |||||||| |||||  ||||||  |||||||||| ||| ||||||||||||||||||||  ||  |||||||||| |  || |||| |||  ||||||||    
T  32506967 tatatggtagaccactcttaaggttggtccaccatagatatttggggttaaacttaacagtcaaggatttatttggcaaactgagaaaaatgtgagggac 32507066  T
Q  241 aaaaacatgagttttattaattatgggaccaaaatgaaaac 281  Q
     ||||||  | ||||||||| | ||||| ||||||||||||    
T  32507067 taaaacaccatttttattaaatgtgggatcaaaatgaaaac 32507107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 252 - 318
Target Start/End: Complemental strand, 35037197 - 35037131
Alignment:
Q  252 ttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    |||||| | ||||| |||||||||||||||||||||||||||||||||| |||  ||| ||||||||    
T  35037197 ttttatgagttatgagaccaaaatgaaaactgaaaattaattagaggaccaaaaaaccaattaagcc 35037131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 233 - 318
Target Start/End: Original strand, 233597 - 233682
Alignment:
Q  233 tgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagcc 318  Q
    |||||||| ||||| ||  ||||||||||||||||||||||||||||| |  |||||| ||| ||||| || ||| ||||||||||    
T  233597 tgagggactaaaacgtgttttttattaattatgggaccaaaatgaaaaattgaaattatttaaaggaccaattgatctattaagcc 233682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 6452562 - 6452611
Alignment:
Q  251 gttttattaattatgggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    ||||||||||||||||||||||||||||||||  |||||| |||| ||||    
T  6452562 gttttattaattatgggaccaaaatgaaaacttgaaattatttaggggac 6452611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 12780601 - 12780549
Alignment:
Q  242 aaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaatta 294  Q
    ||||||||| ||||||||||||||||| ||| || |||||| |||||||||||    
T  12780601 aaaacatgaattttattaattatgggatcaacataaaaactaaaaattaatta 12780549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 1367550 - 1367479
Alignment:
Q  177 gacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaaaaacat 248  Q
    |||||||||||||||||||||| | |||||||||| |||||  ||| ||| |||| | |||||| |||||||    
T  1367550 gacatttggggttaaacttaaccatcagagatttacttgactaacgaagacaaacataagggaccaaaacat 1367479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 174
Target Start/End: Original strand, 12669863 - 12669894
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccacca 174  Q
    ||||||||||||||||||||||||||||||||    
T  12669863 tatggtggaccaaccttaagagtggtccacca 12669894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 198
Target Start/End: Original strand, 29381649 - 29381730
Alignment:
Q  120 aaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacaga---catttggggttaaacttaac 198  Q
    ||||||||  |||||||||||| ||||||||| ||  ||||||  | ||||||||||||   ||||||||||||||||||||    
T  29381649 aaattaaaataattaataggatctatggtggatcactcttaaggtttgtccaccacagacatcatttggggttaaacttaac 29381730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 16208603 - 16208533
Alignment:
Q  237 ggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaatga 307  Q
    |||| ||||||||| ||||||||  |||||||||||||| |||| ||||||||| |||  |||| ||||||    
T  16208603 ggaccaaaacatgacttttattagatatgggaccaaaataaaaattgaaaattatttaagggaccaaatga 16208533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 280
Target Start/End: Complemental strand, 232241 - 232212
Alignment:
Q  251 gttttattaattatgggaccaaaatgaaaa 280  Q
    ||||||||||||||||||||||||||||||    
T  232241 gttttattaattatgggaccaaaatgaaaa 232212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 281
Target Start/End: Original strand, 5187674 - 5187703
Alignment:
Q  252 ttttattaattatgggaccaaaatgaaaac 281  Q
    ||||||||||||||||||||||||||||||    
T  5187674 ttttattaattatgggaccaaaatgaaaac 5187703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 7311632 - 7311705
Alignment:
Q  108 atcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacat 181  Q
    |||||||  |||||||||||  |||||||||||| ||||||||||||  ||||||  |||| ||||| ||||||    
T  7311632 atcaaacggtttaaattaaaataattaataggatttatggtggaccactcttaaggttggttcaccatagacat 7311705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 12784785 - 12784728
Alignment:
Q  237 ggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaatta 294  Q
    |||| ||||||||| |||||||||||||| |||||| || ||| || |||||||||||    
T  12784785 ggactaaaacatgaattttattaattatgagaccaacataaaatctaaaaattaatta 12784728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 15730082 - 15730123
Alignment:
Q  252 ttttattaattatgggaccaaaatgaaaactgaaaattaatt 293  Q
    ||||||||||| ||||||||||||||||| || |||||||||    
T  15730082 ttttattaattgtgggaccaaaatgaaaaatggaaattaatt 15730123  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 317
Target Start/End: Complemental strand, 7308404 - 7308352
Alignment:
Q  265 gggaccaaaatgaaaactgaaaattaattagaggactaaatgacctattaagc 317  Q
    ||||||||||||||||||  |||||||||| | ||| |||| |||||||||||    
T  7308404 gggaccaaaatgaaaacttgaaattaattaaatgaccaaataacctattaagc 7308352  T

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Target: scaffold0118 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 108 - 290
Target Start/End: Original strand, 43481 - 43665
Alignment:
Q  108 atcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacat---ttggggttaaacttaacaaccag 204  Q
    |||||||  |||||||||||  |||||||||||| ||||||||||||  ||||||| |||||||||| ||||||   |||||||||||||||||   |||    
T  43481 atcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaagattggtccaccatagacatcacttggggttaaacttaaccgtcag 43580  T
Q  205 agatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaatta 290  Q
     || ||||||| |  ||||||  |||  ||||||||  ||||||  ||||||||||||||||||||||||| |||||| |||||||    
T  43581 -gacttatttggcaaacggaggaaaaagtgagggacttaaacatacgttttattaattatgggaccaaaataaaaacttaaaatta 43665  T

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Target: scaffold0128 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 117 - 295
Target Start/End: Complemental strand, 22179 - 22009
Alignment:
Q  117 tttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttga 216  Q
    ||||||||||| ||||||||||| | |||||||||||| |   ||   |||||||||| || ||||| |||||||||||||        |||||||||||    
T  22179 tttaaattaaagaaattaatagggtctatggtggaccacctacaatgttggtccaccataggcattttgggttaaacttaa--------gatttatttga 22088  T
Q  217 ccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattag 295  Q
    | || ||||  |||||| |||||| ||||||||||||||||||| |||| || ||| || ||||||| |||||||||||    
T  22087 ctgaaggaggcaaacctaagggaccaaaacatgagttttattaactatgtgatcaatataaaaactgtaaattaattag 22009  T

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Target: scaffold0201 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 143 - 293
Target Start/End: Complemental strand, 21300 - 21150
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaa 242  Q
    ||||||||||||  || |||  |||||||||| ||||||||| |||||||||||||||| |  |||||||||| |  ||||||  ||| || |||||  |    
T  21300 tatggtggaccactctgaaggttggtccaccatagacatttgtggttaaacttaacaacgaatgatttatttggcaaacggaggaaaaactaagggatca 21201  T
Q  243 aaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaatt 293  Q
    |||  |   |||||||||||||||||| |||||||||| ||||||||||||    
T  21200 aaaggtactttttattaattatgggactaaaatgaaaaatgaaaattaatt 21150  T

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Target: scaffold0201; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 21267 - 21303
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccaccacagac 179  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  21267 tatggtggaccaaccttcagagtggtccaccatagac 21303  T

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Target: scaffold0031 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 107 - 282
Target Start/End: Complemental strand, 124176 - 124003
Alignment:
Q  107 gatcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagag 206  Q
    |||||||| |||||||||||  || |||||| ||| ||||||||||||  ||||||  |||||||||| ||| |||||||||||||||||||    || |    
T  124176 gatcaaacgatttaaattaac-aatttaatacgatctatggtggaccactcttaaggttggtccaccatagatatttggggttaaacttaaccgtaag-g 124079  T
Q  207 atttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaact 282  Q
    ||||||||| |  || |||  |||  |||||||| ||||  |  |||||||||||| |||||||||||||||||||    
T  124078 atttatttggcaaacagaggaaaaagtgagggaccaaaatgtacgttttattaattgtgggaccaaaatgaaaact 124003  T

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Target: scaffold0031; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 174
Target Start/End: Original strand, 124108 - 124139
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccacca 174  Q
    ||||||||||||||||||||||||||||||||    
T  124108 tatggtggaccaaccttaagagtggtccacca 124139  T

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Target: scaffold0078 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 233 - 299
Target Start/End: Complemental strand, 18895 - 18829
Alignment:
Q  233 tgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagagga 299  Q
    |||||||| ||||||| ||||||||||| ||||||||||||||||||||| ||||||| ||| ||||    
T  18895 tgagggactaaaacataagttttattaaatatgggaccaaaatgaaaacttaaaattatttaaagga 18829  T

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Target: scaffold0035 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 83045 - 83107
Alignment:
Q  23 atgggatataaagttagatgttgttagttcaccgtaagatacagtagacatgcatgatctaac 85  Q
    ||||||||||| | ||||||||||| |||||| |||||||||||| |||||||||||||||||    
T  83045 atgggatataatgctagatgttgttggttcacagtaagatacagtggacatgcatgatctaac 83107  T

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Target: scaffold0019 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 143 - 281
Target Start/End: Original strand, 63074 - 63212
Alignment:
Q  143 tatggtggaccaaccttaagagtggtccaccacagacatttggggttaaacttaacaaccagagatttatttgaccgacggagataaacctgagggacaa 242  Q
    ||||||||||||  ||||||| || |||| || |||||||||  |||||||||||||  ||| |||||||||| |  ||||||| |||  |||||||| |    
T  63074 tatggtggaccattcttaagattgatccatcatagacatttgaagttaaacttaacagtcagggatttatttggcaaacggagaaaaatgtgagggacta 63173  T
Q  243 aaacatgagttttattaattatgggaccaaaatgaaaac 281  Q
    ||||   |  |||||||||| ||||||||||||||||||    
T  63174 aaacgccatctttattaattgtgggaccaaaatgaaaac 63212  T

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Target: scaffold0620 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 312
Target Start/End: Complemental strand, 8819 - 8721
Alignment:
Q  206 gatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggactaaat 305  Q
    ||||||||||||||||||| | ||||||||||||| |||||||||||||||||        ||| ||||| ||||||  ||||||||||| |||| ||||    
T  8819 gatttatttgaccgacggaaacaaacctgagggaccaaaacatgagttttatt--------gacaaaaataaaaacttgaaattaattaggggaccaaat 8728  T

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Target: scaffold0077 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 108 - 282
Target Start/End: Original strand, 54091 - 54267
Alignment:
Q  108 atcaaacaatttaaattaaataaattaataggatatatggtggaccaaccttaagagtggtccaccacaga---catttggggttaaacttaacaaccag 204  Q
    |||||||| |||||||||||  |||||||||||| ||||||||||||   |||||  |||||||||| |||   |||||||||||| ||||||||  ||     
T  54091 atcaaacagtttaaattaaaataattaataggatctatggtggaccacttttaaggttggtccaccatagacatcatttggggttatacttaacagtca- 54189  T
Q  205 agatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaact 282  Q
     |||||||||| |  ||||||  |||  |||||||| |||||    |||||||||||| || ||||||||| ||||||    
T  54190 cgatttatttggcaaacggaggaaaatttgagggaccaaaacgcacgttttattaattgtgcgaccaaaattaaaact 54267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 206 - 300
Target Start/End: Complemental strand, 52702 - 52608
Alignment:
Q  206 gatttatttgaccgacggagataaacctgagggacaaaaacatgagttttattaattatgggaccaaaatgaaaactgaaaattaattagaggac 300  Q
    |||||||||| |  ||||||| ||| ||||||||| ||||| |   ||||||||||| ||||| |||||||||||||  ||||||||||||||||    
T  52702 gatttatttggcaaacggagaaaaatctgagggaccaaaacgtacattttattaattgtgggatcaaaatgaaaacttgaaattaattagaggac 52608  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 316
Target Start/End: Original strand, 334150 - 334220
Alignment:
Q  247 atgagttttattaattatgggaccaaaatgaaaactgaaaattaattagagga-ctaaatgacctattaag 316  Q
    ||||||||||||| |||||| || ||||||||||||  ||||||||| | ||| | |||||||||||||||    
T  334150 atgagttttattagttatggaactaaaatgaaaacttgaaattaatttggggatcaaaatgacctattaag 334220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 316
Target Start/End: Original strand, 44857 - 44927
Alignment:
Q  247 atgagttttattaattatgggaccaaaatgaaaactgaaaattaattagagga-ctaaatgacctattaag 316  Q
    ||||||||||||| |||||| || ||||||||||||  ||||||||| | ||| | |||||||||||||||    
T  44857 atgagttttattagttatggaactaaaatgaaaacttgaaattaatttggggatcaaaatgacctattaag 44927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 108578 - 108534
Alignment:
Q  251 gttttattaattatgggaccaaaatgaaaactgaaaattaattag 295  Q
    |||||||||||||||||| ||||||| ||| || |||||||||||    
T  108578 gttttattaattatgggatcaaaatgtaaaatggaaattaattag 108534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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