View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3002_low_3 (Length: 795)

Name: NF3002_low_3
Description: NF3002
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3002_low_3
NF3002_low_3
[»] chr8 (54 HSPs)
chr8 (338-760)||(9762604-9763041)
chr8 (338-757)||(8226921-8227358)
chr8 (338-760)||(11481433-11481871)
chr8 (372-760)||(7986880-7987282)
chr8 (338-520)||(36582820-36583002)
chr8 (567-760)||(36582609-36582802)
chr8 (512-744)||(28211608-28211840)
chr8 (338-437)||(7968446-7968545)
chr8 (338-517)||(6870548-6870743)
chr8 (567-715)||(7968184-7968332)
chr8 (338-538)||(13355819-13356033)
chr8 (560-760)||(31006285-31006485)
chr8 (205-273)||(24962237-24962305)
chr8 (205-273)||(43980455-43980523)
chr8 (383-437)||(7987288-7987342)
chr8 (205-273)||(57060-57128)
chr8 (338-435)||(31006021-31006120)
chr8 (195-273)||(40601901-40601980)
chr8 (195-273)||(43191342-43191421)
chr8 (207-273)||(31252529-31252595)
chr8 (205-275)||(31746278-31746348)
chr8 (207-273)||(38761230-38761296)
chr8 (205-270)||(37956283-37956348)
chr8 (205-273)||(2303258-2303326)
chr8 (205-273)||(2327852-2327920)
chr8 (205-273)||(10396102-10396170)
chr8 (205-273)||(40517906-40517974)
chr8 (207-273)||(25185199-25185265)
chr8 (655-756)||(6870282-6870383)
chr8 (195-275)||(45283348-45283429)
chr8 (229-273)||(4273862-4273906)
chr8 (209-273)||(5191425-5191489)
chr8 (205-273)||(25198455-25198522)
chr8 (205-273)||(37141892-37141960)
chr8 (205-273)||(45183734-45183802)
chr8 (441-520)||(7968348-7968427)
chr8 (195-273)||(12763008-12763086)
chr8 (207-273)||(885626-885692)
chr8 (223-273)||(7772677-7772727)
chr8 (223-273)||(39543550-39543600)
chr8 (204-262)||(45426096-45426154)
chr8 (223-268)||(16357158-16357203)
chr8 (223-272)||(40790955-40791004)
chr8 (205-273)||(38202864-38202932)
chr8 (223-254)||(3656102-3656133)
chr8 (206-273)||(7172384-7172450)
chr8 (223-270)||(34158085-34158132)
chr8 (223-270)||(40807901-40807948)
chr8 (223-253)||(5969830-5969860)
chr8 (223-273)||(26878618-26878668)
chr8 (223-253)||(27679101-27679131)
chr8 (223-253)||(31008362-31008392)
chr8 (223-253)||(41726185-41726215)
chr8 (195-266)||(24512027-24512099)
[»] chr5 (47 HSPs)
chr5 (338-757)||(3926210-3926644)
chr5 (338-760)||(39206810-39207231)
chr5 (435-720)||(42837637-42837921)
chr5 (338-760)||(35188301-35188707)
chr5 (338-715)||(23429250-23429643)
chr5 (471-720)||(42878668-42878916)
chr5 (461-615)||(33742521-33742675)
chr5 (15-159)||(40978926-40979070)
chr5 (555-757)||(39800125-39800327)
chr5 (340-429)||(42878917-42879006)
chr5 (364-517)||(2209575-2209741)
chr5 (627-757)||(40057171-40057301)
chr5 (338-616)||(26621390-26621673)
chr5 (205-273)||(15898332-15898400)
chr5 (205-273)||(25690523-25690591)
chr5 (205-273)||(39690356-39690424)
chr5 (195-273)||(36177459-36177538)
chr5 (363-434)||(40057002-40057073)
chr5 (223-273)||(20975693-20975743)
chr5 (205-270)||(35568875-35568940)
chr5 (582-715)||(39886941-39887074)
chr5 (205-273)||(12895050-12895117)
chr5 (205-273)||(36750646-36750714)
chr5 (338-434)||(39800435-39800531)
chr5 (207-270)||(43060087-43060151)
chr5 (206-273)||(21912286-21912353)
chr5 (207-273)||(3630990-3631056)
chr5 (205-267)||(25017541-25017603)
chr5 (223-273)||(27642668-27642718)
chr5 (654-752)||(33742401-33742498)
chr5 (223-268)||(18032766-18032811)
chr5 (223-275)||(7510703-7510755)
chr5 (205-269)||(27588011-27588074)
chr5 (338-400)||(33742765-33742829)
chr5 (371-423)||(39886812-39886864)
chr5 (218-273)||(40979093-40979148)
chr5 (223-273)||(5151089-5151139)
chr5 (223-273)||(27925439-27925489)
chr5 (195-273)||(3558886-3558965)
chr5 (223-254)||(35758270-35758301)
chr5 (223-253)||(6514308-6514338)
chr5 (223-253)||(8760931-8760961)
chr5 (223-273)||(36347489-36347539)
chr5 (223-253)||(36745694-36745724)
chr5 (223-253)||(38040869-38040899)
chr5 (223-253)||(40144150-40144180)
chr5 (205-273)||(10523143-10523209)
[»] chr2 (44 HSPs)
chr2 (338-715)||(31575663-31576055)
chr2 (338-681)||(13807561-13807919)
chr2 (338-751)||(5110224-5110652)
chr2 (338-757)||(5704619-5705047)
chr2 (338-715)||(45150961-45151352)
chr2 (349-760)||(13625990-13626417)
chr2 (338-437)||(5938744-5938843)
chr2 (544-755)||(5938914-5939125)
chr2 (627-757)||(42622349-42622479)
chr2 (195-273)||(27297743-27297822)
chr2 (205-273)||(3237881-3237949)
chr2 (206-273)||(534631-534698)
chr2 (207-273)||(44424759-44424825)
chr2 (205-273)||(17663790-17663858)
chr2 (205-273)||(20362148-20362216)
chr2 (206-273)||(34330166-34330233)
chr2 (207-273)||(27749633-27749699)
chr2 (207-273)||(31644316-31644382)
chr2 (338-400)||(45458442-45458504)
chr2 (205-273)||(15851698-15851765)
chr2 (205-273)||(37355203-37355271)
chr2 (338-434)||(42625047-42625143)
chr2 (223-275)||(45150631-45150683)
chr2 (207-273)||(7278486-7278552)
chr2 (624-718)||(14701486-14701580)
chr2 (223-273)||(41865881-41865931)
chr2 (195-275)||(1246272-1246353)
chr2 (225-273)||(28264844-28264892)
chr2 (227-275)||(40345969-40346017)
chr2 (206-273)||(4033992-4034059)
chr2 (223-270)||(25731077-25731123)
chr2 (195-273)||(41327664-41327743)
chr2 (195-273)||(44421899-44421978)
chr2 (207-273)||(4398457-4398523)
chr2 (223-273)||(11071835-11071885)
chr2 (205-274)||(24775030-24775099)
chr2 (205-270)||(28733992-28734057)
chr2 (223-275)||(8064962-8065014)
chr2 (205-273)||(41665874-41665942)
chr2 (223-254)||(31900650-31900681)
chr2 (223-273)||(9718061-9718111)
chr2 (223-253)||(24128999-24129029)
chr2 (207-253)||(43650212-43650258)
chr2 (213-273)||(3326892-3326953)
[»] chr3 (59 HSPs)
chr3 (338-760)||(25874379-25874817)
chr3 (338-754)||(21288113-21288538)
chr3 (338-760)||(5295224-5295664)
chr3 (338-755)||(27926316-27926735)
chr3 (516-742)||(13826260-13826486)
chr3 (530-753)||(3778662-3778884)
chr3 (338-438)||(3778921-3779021)
chr3 (555-757)||(12149232-12149434)
chr3 (562-751)||(48251174-48251363)
chr3 (338-437)||(13825924-13826023)
chr3 (574-709)||(27519865-27520000)
chr3 (338-409)||(48251708-48251779)
chr3 (223-273)||(12077632-12077682)
chr3 (205-273)||(20945173-20945241)
chr3 (205-273)||(44083792-44083860)
chr3 (195-273)||(29645489-29645568)
chr3 (339-400)||(36584415-36584476)
chr3 (205-273)||(46048688-46048756)
chr3 (205-273)||(11345485-11345553)
chr3 (205-273)||(13084233-13084301)
chr3 (357-420)||(13084732-13084795)
chr3 (195-273)||(26517077-26517156)
chr3 (206-273)||(26999208-26999275)
chr3 (435-513)||(48251435-48251515)
chr3 (338-434)||(12149034-12149130)
chr3 (205-273)||(28477549-28477617)
chr3 (205-273)||(31531001-31531068)
chr3 (205-273)||(43186974-43187042)
chr3 (207-270)||(14645764-14645827)
chr3 (379-434)||(32847582-32847637)
chr3 (583-662)||(36585000-36585079)
chr3 (233-275)||(25750681-25750723)
chr3 (205-270)||(29676614-29676679)
chr3 (205-275)||(33411849-33411919)
chr3 (223-273)||(42891583-42891633)
chr3 (207-273)||(50524851-50524917)
chr3 (207-272)||(26043183-26043247)
chr3 (339-400)||(26187939-26188000)
chr3 (205-273)||(31819571-31819639)
chr3 (205-273)||(35145397-35145464)
chr3 (435-506)||(36584501-36584573)
chr3 (223-275)||(44698412-44698464)
chr3 (206-273)||(3475615-3475682)
chr3 (223-254)||(10259041-10259072)
chr3 (207-274)||(34055740-34055807)
chr3 (223-254)||(39850940-39850971)
chr3 (223-270)||(41727129-41727176)
chr3 (223-273)||(11140861-11140911)
chr3 (235-273)||(11388288-11388326)
chr3 (223-253)||(11676087-11676117)
chr3 (441-491)||(13826042-13826092)
chr3 (223-253)||(23241689-23241719)
chr3 (223-273)||(29349543-29349593)
chr3 (223-253)||(30464913-30464943)
chr3 (223-253)||(33635129-33635159)
chr3 (223-253)||(33987064-33987094)
chr3 (223-253)||(37599713-37599743)
chr3 (207-273)||(53716843-53716909)
chr3 (223-253)||(55257929-55257959)
[»] chr1 (59 HSPs)
chr1 (346-760)||(48378761-48379191)
chr1 (338-760)||(11894306-11894712)
chr1 (338-749)||(47140802-47141228)
chr1 (338-764)||(31584911-31585342)
chr1 (338-757)||(25987404-25987797)
chr1 (338-502)||(29678249-29678428)
chr1 (555-757)||(25293730-25293932)
chr1 (546-760)||(29677287-29677496)
chr1 (338-501)||(36728684-36728862)
chr1 (566-709)||(2191518-2191661)
chr1 (338-435)||(19884422-19884519)
chr1 (338-437)||(17562796-17562895)
chr1 (338-437)||(31292770-31292866)
chr1 (513-744)||(15378941-15379178)
chr1 (566-689)||(38264075-38264198)
chr1 (196-273)||(34696743-34696821)
chr1 (338-400)||(38264380-38264442)
chr1 (204-273)||(3831212-3831281)
chr1 (487-623)||(17562605-17562746)
chr1 (195-275)||(25063375-25063456)
chr1 (205-273)||(5084959-5085027)
chr1 (578-714)||(33089058-33089192)
chr1 (349-400)||(2191843-2191894)
chr1 (207-273)||(28723522-28723588)
chr1 (223-275)||(5321910-5321962)
chr1 (205-273)||(15512651-15512719)
chr1 (205-273)||(28948834-28948902)
chr1 (206-273)||(4817777-4817844)
chr1 (206-273)||(4829577-4829644)
chr1 (207-273)||(52141047-52141113)
chr1 (668-764)||(17562505-17562601)
chr1 (205-273)||(32715958-32716025)
chr1 (440-506)||(2191744-2191811)
chr1 (207-273)||(9684588-9684654)
chr1 (223-273)||(28334108-28334158)
chr1 (223-273)||(47643705-47643755)
chr1 (671-756)||(42507299-42507384)
chr1 (205-273)||(48721739-48721807)
chr1 (195-273)||(51390397-51390476)
chr1 (205-267)||(3143575-3143637)
chr1 (223-273)||(7957575-7957625)
chr1 (205-275)||(30898433-30898503)
chr1 (679-757)||(36728544-36728622)
chr1 (223-268)||(51997126-51997171)
chr1 (205-273)||(8877937-8878003)
chr1 (206-273)||(34012651-34012718)
chr1 (353-400)||(52252710-52252757)
chr1 (223-253)||(9293868-9293898)
chr1 (223-253)||(12792908-12792938)
chr1 (223-273)||(25269541-25269591)
chr1 (227-273)||(29140549-29140595)
chr1 (499-553)||(31292664-31292718)
chr1 (529-599)||(36728615-36728684)
chr1 (223-253)||(44258016-44258046)
chr1 (683-724)||(967849-967890)
chr1 (223-268)||(12844031-12844076)
chr1 (205-273)||(36085135-36085203)
chr1 (205-273)||(46591267-46591335)
chr1 (205-270)||(46732831-46732896)
[»] chr7 (66 HSPs)
chr7 (345-707)||(23809405-23809782)
chr7 (338-757)||(11038866-11039300)
chr7 (436-756)||(38440093-38440412)
chr7 (338-721)||(30541203-30541600)
chr7 (457-715)||(5973138-5973396)
chr7 (530-764)||(33189541-33189775)
chr7 (530-742)||(7767217-7767429)
chr7 (560-761)||(1052736-1052940)
chr7 (338-437)||(28636383-28636482)
chr7 (338-438)||(38440455-38440555)
chr7 (512-747)||(2943742-2943976)
chr7 (338-437)||(5972977-5973076)
chr7 (338-507)||(36298791-36298976)
chr7 (342-437)||(7767084-7767179)
chr7 (346-437)||(33189415-33189504)
chr7 (566-757)||(36299062-36299252)
chr7 (338-435)||(1053135-1053232)
chr7 (338-506)||(31457272-31457464)
chr7 (512-725)||(22518889-22519100)
chr7 (339-410)||(25502158-25502229)
chr7 (351-437)||(2944090-2944176)
chr7 (338-437)||(22519214-22519312)
chr7 (550-755)||(47925078-47925282)
chr7 (338-418)||(15954668-15954748)
chr7 (627-723)||(27337317-27337413)
chr7 (195-273)||(10685250-10685329)
chr7 (205-273)||(19235936-19236004)
chr7 (205-273)||(48767731-48767799)
chr7 (210-273)||(8318697-8318760)
chr7 (546-662)||(25502330-25502447)
chr7 (207-266)||(42983487-42983546)
chr7 (223-273)||(35128551-35128601)
chr7 (572-697)||(2891187-2891312)
chr7 (205-273)||(1324873-1324941)
chr7 (205-273)||(4089372-4089440)
chr7 (205-273)||(21388408-21388476)
chr7 (205-273)||(26633012-26633080)
chr7 (338-434)||(27336942-27337038)
chr7 (205-272)||(2276450-2276517)
chr7 (567-618)||(15953894-15953945)
chr7 (441-492)||(25502265-25502316)
chr7 (222-273)||(37673903-37673954)
chr7 (223-274)||(43601057-43601108)
chr7 (440-517)||(2943994-2944072)
chr7 (223-273)||(5333788-5333838)
chr7 (655-721)||(43427079-43427145)
chr7 (338-399)||(47924990-47925054)
chr7 (223-273)||(48610027-48610076)
chr7 (205-273)||(21759886-21759954)
chr7 (205-273)||(36726043-36726111)
chr7 (435-517)||(1053007-1053090)
chr7 (222-253)||(14801818-14801849)
chr7 (222-253)||(15248810-15248841)
chr7 (435-505)||(15954019-15954090)
chr7 (443-505)||(22519130-22519193)
chr7 (195-253)||(37491480-37491539)
chr7 (207-270)||(47458060-47458123)
chr7 (223-273)||(18121933-18121982)
chr7 (223-273)||(20123612-20123661)
chr7 (223-273)||(31365713-31365763)
chr7 (223-253)||(36858379-36858409)
chr7 (195-273)||(37048198-37048275)
chr7 (223-268)||(25098275-25098320)
chr7 (441-478)||(28636501-28636538)
chr7 (223-252)||(29983482-29983511)
chr7 (340-377)||(40910567-40910604)
[»] chr4 (69 HSPs)
chr4 (338-760)||(38951638-38952075)
chr4 (338-764)||(19841758-19842187)
chr4 (346-536)||(41039359-41039563)
chr4 (560-756)||(8818972-8819168)
chr4 (338-582)||(22278330-22278589)
chr4 (576-754)||(41041707-41041885)
chr4 (338-517)||(42555329-42555524)
chr4 (530-692)||(43624569-43624728)
chr4 (512-755)||(40714504-40714746)
chr4 (550-720)||(42555580-42555750)
chr4 (560-744)||(36464494-36464678)
chr4 (338-437)||(29117038-29117137)
chr4 (339-437)||(40714866-40714964)
chr4 (560-719)||(51357451-51357604)
chr4 (338-435)||(8819328-8819425)
chr4 (581-760)||(22279277-22279455)
chr4 (338-517)||(23626859-23627051)
chr4 (338-507)||(51357186-51357370)
chr4 (629-757)||(40568617-40568745)
chr4 (575-722)||(29117274-29117421)
chr4 (338-437)||(43624430-43624531)
chr4 (512-764)||(33340804-33341056)
chr4 (579-741)||(17119979-17120141)
chr4 (205-273)||(12624862-12624930)
chr4 (338-517)||(17120227-17120396)
chr4 (206-275)||(51787934-51788003)
chr4 (206-273)||(24072933-24073000)
chr4 (204-275)||(26203295-26203366)
chr4 (195-273)||(40411203-40411282)
chr4 (223-273)||(22651630-22651680)
chr4 (373-435)||(36464847-36464908)
chr4 (566-715)||(23627123-23627272)
chr4 (206-275)||(38136514-38136583)
chr4 (205-273)||(5168145-5168213)
chr4 (205-273)||(31936965-31937033)
chr4 (206-273)||(5536650-5536717)
chr4 (223-273)||(31917541-31917591)
chr4 (223-273)||(33246387-33246437)
chr4 (205-275)||(43800972-43801042)
chr4 (207-275)||(54701167-54701235)
chr4 (205-273)||(20116617-20116685)
chr4 (198-273)||(25477391-25477466)
chr4 (442-517)||(33340710-33340786)
chr4 (223-267)||(39813847-39813891)
chr4 (213-273)||(43509248-43509308)
chr4 (233-273)||(52226186-52226226)
chr4 (223-270)||(31486657-31486704)
chr4 (205-252)||(45627959-45628006)
chr4 (223-273)||(37625013-37625063)
chr4 (229-275)||(52198623-52198669)
chr4 (227-273)||(54359848-54359894)
chr4 (206-272)||(54438677-54438743)
chr4 (207-273)||(51918528-51918596)
chr4 (229-273)||(10602105-10602149)
chr4 (237-273)||(14602554-14602590)
chr4 (207-267)||(19654601-19654661)
chr4 (205-273)||(20293914-20293982)
chr4 (205-273)||(31840261-31840329)
chr4 (228-268)||(50438208-50438248)
chr4 (223-274)||(3094499-3094550)
chr4 (227-270)||(41945666-41945709)
chr4 (223-253)||(11792620-11792650)
chr4 (223-253)||(11861287-11861317)
chr4 (229-275)||(13096436-13096482)
chr4 (223-253)||(23611364-23611394)
chr4 (436-517)||(36464749-36464831)
chr4 (208-273)||(5933052-5933117)
chr4 (208-273)||(39196907-39196972)
chr4 (338-438)||(40571921-40572021)
[»] chr6 (28 HSPs)
chr6 (341-760)||(10788495-10788928)
chr6 (338-692)||(8576766-8577123)
chr6 (338-757)||(35166967-35167400)
chr6 (546-756)||(7622541-7622751)
chr6 (435-760)||(641707-642039)
chr6 (555-760)||(10408619-10408824)
chr6 (338-437)||(7622380-7622474)
chr6 (341-418)||(642094-642171)
chr6 (338-405)||(7245529-7245596)
chr6 (338-437)||(34433213-34433312)
chr6 (575-723)||(28582432-28582580)
chr6 (338-437)||(28582157-28582255)
chr6 (205-273)||(6791542-6791610)
chr6 (205-273)||(19839097-19839165)
chr6 (339-437)||(10408978-10409076)
chr6 (205-273)||(11303023-11303091)
chr6 (204-273)||(30249027-30249096)
chr6 (206-273)||(28238189-28238254)
chr6 (205-273)||(30465840-30465908)
chr6 (223-273)||(197339-197389)
chr6 (223-273)||(16186736-16186786)
chr6 (223-273)||(31945802-31945852)
chr6 (205-273)||(1763979-1764047)
chr6 (440-480)||(7622491-7622531)
chr6 (229-273)||(34513115-34513159)
chr6 (223-253)||(24068024-24068054)
chr6 (441-513)||(10408886-10408959)
chr6 (381-434)||(17930270-17930323)
[»] scaffold0155 (2 HSPs)
scaffold0155 (562-755)||(6628-6821)
scaffold0155 (338-505)||(6820-7002)
[»] scaffold0115 (2 HSPs)
scaffold0115 (555-757)||(22222-22424)
scaffold0115 (338-434)||(22064-22160)
[»] scaffold0634 (1 HSPs)
scaffold0634 (555-757)||(8951-9153)
[»] scaffold0057 (3 HSPs)
scaffold0057 (627-760)||(66858-66991)
scaffold0057 (435-503)||(66644-66713)
scaffold0057 (363-400)||(66582-66619)
[»] scaffold1091 (1 HSPs)
scaffold1091 (195-273)||(1773-1852)
[»] scaffold0009 (1 HSPs)
scaffold0009 (204-274)||(25864-25934)
[»] scaffold0038 (1 HSPs)
scaffold0038 (206-273)||(38351-38416)
[»] scaffold0005 (1 HSPs)
scaffold0005 (237-273)||(214788-214824)
[»] scaffold0559 (1 HSPs)
scaffold0559 (223-270)||(6678-6725)
[»] scaffold0070 (1 HSPs)
scaffold0070 (223-253)||(12967-12997)
[»] scaffold0041 (1 HSPs)
scaffold0041 (340-377)||(62490-62527)


Alignment Details
Target: chr8 (Bit Score: 252; Significance: 1e-140; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 338 - 760
Target Start/End: Complemental strand, 9763041 - 9762604
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  9763041 cataatattcatacattacaataacaacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttaatttaa 9762942  T
Q  438 ---------------agctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactga 522  Q
                   || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |    
T  9762941 caaaaacataagtaaagttcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttcattttaaaggagcgtaataactaa 9762842  T
Q  523 taacactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcag 622  Q
    |||||||||||||| ||||| |||||||||| |||| |||||| |||| ||||||||||||||||||| ||| |||||||||  || ||||||||||  |    
T  9762841 taacactcacaatatctagggtgttttcttaggaagttgaatgatattaaggttatttatgtaatttattcgatttaatagcgagtatggatatccgagg 9762742  T
Q  623 ctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccg 722  Q
     |||||||||||| |||||| ||||||||| ||||||||| ||| ||||||||||||| ||||||||||| ||||||||||||||||| |||| ||||||    
T  9762741 atgtggataccatcaaatccgcatccatatccattaattagcaggtagttaaaaaatctgtttattttatccatggatatccattaaggtatccgctccg 9762642  T
Q  723 ttcccgtgatggattttatccgtggatatccacgggtg 760  Q
    | ||||||  ||||||||||||  ||||||||||||||    
T  9762641 tgcccgtggcggattttatccgcagatatccacgggtg 9762604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 338 - 757
Target Start/End: Complemental strand, 8227358 - 8226921
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    |||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8227358 cataatattcatacattacaataacaacaaagatcattgactaaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 8227259  T
Q  438 ---------------agctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataac--- 519  Q
                   | ||||||||||||||||||||||||  |||||||||||||||  |||||||||| |||||||||||||| |||||||||||       
T  8227258 caaaaacataagtaaaactcatcatattcaacataaacaaagtttttgcttcaacaatgtcaaccactttcacttccttttaaaggagcgtaataaccga 8227159  T
Q  520 tgataacactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccg 619  Q
    |||||||||||||||||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||| ||| || |||||||    
T  8227158 tgataacactcacaatacttagggtgttttcttaggaagttgaatgatattgaggttatttatgtaatttactcggtttaatagcgggtatgaatatccg 8227059  T
Q  620 cagctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgct 719  Q
    | | ||||||||||||||||||| ||||| |||  |||||||| | | ||||||||| ||||||||||||||| |||| |||||||||||| ||||  ||    
T  8227058 cgggtgtggataccattaaatccgcatccgtatctattaattagcgggtagttaaaagatccgtttattttatccatgtatatccattaaggtatccact 8226959  T
Q  720 ccgttcccgtgatggattttatccgtggatatccacgg 757  Q
    |||| ||||||| |||||||||||| ||||||||||||    
T  8226958 ccgtgcccgtgacggattttatccgcggatatccacgg 8226921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 338 - 760
Target Start/End: Original strand, 11481433 - 11481871
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11481433 cataatattcacacattacaataatagcaaaaatcattgactcaacaaaaacataaataaactcccttacatttaataaaaataaagttctttgatttaa 11481532  T
Q  438 ---------------agctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactga 522  Q
                   ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||    
T  11481533 caaaaacataagtaaagctcatcatattcaacataaacaaaaattttgcttcaacaatcccaaccatttttactttcttttaaaggagcgtaataactga 11481632  T
Q  523 taacactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcag 622  Q
    |||||||||||||| ||||| |||||||||| |||| |||||| |||||||||||||||  ||||||||||||||||||||| ||| ||||||| ||| |    
T  11481633 taacactcacaatatctagggtgttttcttaggaagttgaatgatattgaggttatttacataatttactcggtttaatagcgggtatggatattcgcgg 11481732  T
Q  623 ctgtggataccattaaatccacatccatattcattaattaacagatagtt-aaaaaatccgtttattttattcatggatatccattaagatatctgctcc 721  Q
     |||||||||| |||||||||||||||||| ||||||||| ||  ||||| ||||||||||||||||||||  |||||||| ||| ||  |||| |||||    
T  11481733 atgtggataccgttaaatccacatccatatccattaattagcaagtagttaaaaaaatccgtttattttatcgatggatattcatcaaagtatccgctcc 11481832  T
Q  722 gttcccgtgatggattttatccgtggatatccacgggtg 760  Q
    || ||||||   ||||||||||  ||||||  |||||||    
T  11481833 gtacccgtggcagattttatccacggatatttacgggtg 11481871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 372 - 760
Target Start/End: Complemental strand, 7987282 - 7986880
Alignment:
Q  372 cattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa---------------agctcatcatattcaacat 456  Q
    ||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||               || ||||| |||||||||     
T  7987282 cattggctcaacaaaaacataaataaagtctcttacatt-aataaaaataaagttctttcatttaacaaaagcatgggtaaagttcatcttattcaacaa 7987184  T
Q  457 aaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactgataacactcacaatacctaggctgttttcttaaga 556  Q
    |||||||  | |||| ||||||||| |||||||||| | |||||||||||| |||||||||||| |||||| |||||||||||| | | ||||||||| |    
T  7987183 aaacaaagttcttgcatcaacaatctcaaccactttcatttccttttaaaggagcgtaataactaataacattcacaatacctatgtttttttcttaata 7987084  T
Q  557 aggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattcat 656  Q
    || ||||||||||| ||||||||||||||||||| ||||||||||||| ||| ||||||||||| | |||| |||||||||||||| ||||| ||| |||    
T  7987083 agttgaatggtattaaggttatttatgtaatttattcggtttaatagcgggtatggatatccgcgggtgtgaataccattaaatccgcatccgtatccat 7986984  T
Q  657 taattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgtgatggattttatccgtggatatccacg 756  Q
    |||||| ||| ||||| | ||||||||||||||||| ||||||||||||||||| |||| ||||| |  ||||   ||||||||||||| ||||| ||||    
T  7986983 taattagcaggtagttgacaaatccgtttattttatccatggatatccattaaggtatccgctccatgtccgtagcggattttatccgtagatattcacg 7986884  T
Q  757 ggtg 760  Q
    ||||    
T  7986883 ggtg 7986880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 338 - 520
Target Start/End: Complemental strand, 36583002 - 36582820
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    |||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||  |||||||||| ||||||||||||||||||||||||    
T  36583002 cataatattcatacattacaataacaacaaagatcattgactccacaaaaacataaataaagtgtcttacatttattaaaaataaagttctttgatttaa 36582903  T
Q  438 agctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataact 520  Q
      |||||||||||||||| ||||||| || ||| ||||||||||||||||||||| |||||| ||||||  ||| ||||||||    
T  36582902 cactcatcatattcaacaaaaacaaagctcttgattcaacaatcccaaccactttcacttccatttaaatgagcataataact 36582820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 567 - 760
Target Start/End: Complemental strand, 36582802 - 36582609
Alignment:
Q  567 tattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattcattaattaacag 666  Q
    |||||||||||||||||||  ||||||||||||||| | ||| ||||||| ||| | |||| |||| ||||||||| ||||| ||| |||||||||   |    
T  36582802 tattgaggttatttatgtatcttactcggtttaataacgggtatggatattcgcgggtgtgtatactattaaatccgcatccgtatccattaattagtgg 36582703  T
Q  667 atagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgtgatggattttatccgtggatatccacgggtg 760  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||  |||||||||||| |||||||||||||||    
T  36582702 atagttaaaaaatccgtttattttattcatggatatccattaagatatccgctccgtgttcgtggcggattttatccgcggatatccacgggtg 36582609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 512 - 744
Target Start/End: Complemental strand, 28211840 - 28211608
Alignment:
Q  512 gtaataactgataacactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtg 611  Q
    ||||||||| |||||||||| | |||| ||| | |||  ||| |||| |||| |||||| ||||||||||||||||||||| |||||||||||   | ||    
T  28211840 gtaataactaataacactcatagtaccgaggatttttgtttaggaagttgaaaggtattaaggttatttatgtaatttacttggtttaatagcgaatatg 28211741  T
Q  612 gatatccgcagctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaaga 711  Q
    |||||| || | ||||||||| ||||||||| ||| | ||| |||||||||   | ||||||||| ||||||||||||||| ||| ||||||||||||      
T  28211740 gatatctgcgggtgtggatactattaaatccgcattcgtatccattaattagtgggtagttaaaatatccgtttattttatccatagatatccattaaag 28211641  T
Q  712 tatctgctccgttcccgtgatggattttatccg 744  Q
    ||||||||| ||  |||||  ||||||||||||    
T  28211640 tatctgctctgtgtccgtggcggattttatccg 28211608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 338 - 437
Target Start/End: Complemental strand, 7968545 - 7968446
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    |||||||| ||||||||||||||| |||||| ||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  7968545 cataatatccatacattacaataacaacaaagatcattggctaaacaaaaacataaataaagtctcttacatttaataaaaataaagttctttcatttaa 7968446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 338 - 517
Target Start/End: Complemental strand, 6870743 - 6870548
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatt--- 434  Q
    |||||||||||||||||||||| | |||||| |||||||||  |||||||| ||||||||||| ||||||||||||||||||||| ||| |||||||       
T  6870743 cataatattcatacattacaattacaacaaagatcattgaccaaacaaaaatataaataaagttccttacatttaataaaaataatgttttttgatttaa 6870644  T
Q  435 ------------taaagctcatcatattcaacataaacaaaactt-ttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaata 517  Q
                ||||||||||||||||||||| ||||||||||| |||||| |||||| || | |||||| |||||||||||||| ||| |||||    
T  6870643 caaaagcataaataaagctcatcatattcaacaaaaacaaaacttcttgctttaacaattccgatcactttcacttccttttaaaggagcataata 6870548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 567 - 715
Target Start/End: Complemental strand, 7968332 - 7968184
Alignment:
Q  567 tattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattcattaattaacag 666  Q
    |||| ||||||||||||||||||| |||||||||||||   | ||||||| ||| | |||| |||||||||||||| ||| | ||| ||||||||| | |    
T  7968332 tattaaggttatttatgtaatttattcggtttaatagcgaatatggatatacgcgggtgtgaataccattaaatccgcatgcgtatccattaattagcgg 7968233  T
Q  667 atagttaaaaaatccgtttattttattcatggatatccattaagatatc 715  Q
     ||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  7968232 gtagttgaaaaatccgtttattttatccatggatatccattaaggtatc 7968184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 338 - 538
Target Start/End: Original strand, 13355819 - 13356033
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatt--- 434  Q
    |||||||| ||||||||| || || |||||| |||||||||| ||||||||||||||||||||| | |||||||||||||||||||||| |||||||       
T  13355819 cataatatccatacattagaacaacaacaaagatcattgacttaacaaaaacataaataaagtctcatacatttaataaaaataaagttatttgatttaa 13355918  T
Q  435 ------------taaagctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccactttta-cttccttttaaagtagcgtaataactg 521  Q
                |||| |||||| ||||||||| ||||||| ||| |  |||||||||| |||||||||| | ||||||||||||| ||||||||||||     
T  13355919 caaaagcttaagtaaaactcatcctattcaacaaaaacaaagcttat--ttcaacaatcgcaaccactttcaccttccttttaaaggagcgtaataacta 13356016  T
Q  522 ataacactcacaatacc 538  Q
    |||| | ||||||||||    
T  13356017 ataatattcacaatacc 13356033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 560 - 760
Target Start/End: Original strand, 31006285 - 31006485
Alignment:
Q  560 tgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattcattaa 659  Q
    ||||||||||| | ||||||||| ||||| ||||||||||||||| | | |||||||  |  | ||  |||||| ||||||||   | | | | ||||||    
T  31006285 tgaatggtattaaagttatttatataattcactcggtttaatagctgatatggatatttgtgggtgcagataccgttaaatccgtgttcgtgtccattaa 31006384  T
Q  660 ttaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgtgatggattttatccgtggatatccacgggt 759  Q
    ||| | ||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||| |  |||||  |||||||||||   |||||||| ||||    
T  31006385 ttagcggatagttaaaatatccgtttattttatccatggatatccattaagatatccgctccatgtccgtggcggattttatccacagatatccatgggt 31006484  T
Q  760 g 760  Q
    |    
T  31006485 g 31006485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 24962237 - 24962305
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||| || |||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24962237 cctatatgtaggcatccatttgattttatttttgtccttaaatgtaaactccttttcaaattactagat 24962305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 43980455 - 43980523
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||| |||||| |  ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  43980455 cctatatgtaagcacccatttgattttatttttgtccttaaatgtaaactccttttcaaattactagat 43980523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 383 - 437
Target Start/End: Complemental strand, 7987342 - 7987288
Alignment:
Q  383 caaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  7987342 caaaaacataaataaagtctcttacatttaataaaaataaagttctttcatttaa 7987288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 57060 - 57128
Alignment:
Q  205 cctatatctaagca-tcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||| ||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  57060 cctatatctaagcactca-tttgattttatttttgtccctaaatgtaaaccccttttcaaattactagat 57128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 338 - 435
Target Start/End: Original strand, 31006021 - 31006120
Alignment:
Q  338 cataatattcatacattacaataataacaaaa--atcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgattt 435  Q
    ||||||||||| ||||||| |||| || ||||  ||||||||||||||||||| |||| |||||| |||| | |||| ||||||||||||| ||||||||    
T  31006021 cataatattcacacattacgataacaaaaaaataatcattgactcaacaaaaatataagtaaagttccttccgtttactaaaaataaagttatttgattt 31006120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 40601901 - 40601980
Alignment:
Q  195 ctccctccatcct-atatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||| | |||||||| ||||  ||||| |||||||||||||||||||||||||  ||||||||||||||||||    
T  40601901 ctccctccatcattatatctaaacatccatttgactttatttttgtccttaaatgtaaacctcttttcaaattactagat 40601980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 43191342 - 43191421
Alignment:
Q  195 ctccctccatcct-atatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||| |||| |||| ||||||||  ||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  43191342 ctccctccgtccttatatgtaagcatccatttgattttatttttgtctctaaatgtaaactccttttcaaattactagat 43191421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 31252529 - 31252595
Alignment:
Q  207 tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||  ||||||||||||||||| | |||||||||||  ||||||||||||||||||    
T  31252529 tatatctaagcatccatttgattttatttttgttcctaaatgtaaacctcttttcaaattactagat 31252595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 205 - 275
Target Start/End: Original strand, 31746278 - 31746348
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagatac 275  Q
    |||||| ||||||| |  ||||| ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  31746278 cctataactaagcacccatttgactttatttttgtccctaaatgtaaaccccttttcaaattactagatac 31746348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 38761230 - 38761296
Alignment:
Q  207 tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||   ||||||||||||||||||| || |||||||| |||||||||||||||||||    
T  38761230 tatatctaagcattcatttgattttatttttgtccctatatgtaaaccccttttcaaattactagat 38761296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 205 - 270
Target Start/End: Complemental strand, 37956348 - 37956283
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattacta 270  Q
    |||||||||||| |||  ||||||||||||||||||| ||||||||||| |||||| |||||||||    
T  37956348 cctatatctaagtatctatttgattttatttttgtccctaaatgtaaacccctttttaaattacta 37956283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 2303326 - 2303258
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||| |  ||||| |||||||||||||  |||||||||| |||||||||||||||||||    
T  2303326 cctatatctaagcaaccatttgaatttatttttgtcccgaaatgtaaactccttttcaaattactagat 2303258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 2327920 - 2327852
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||| |  ||||| |||||||||||||  |||||||||| |||||||||||||||||||    
T  2327920 cctatatctaagcaaccatttgaatttatttttgtcccgaaatgtaaactccttttcaaattactagat 2327852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 10396102 - 10396170
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||| | |||||||||| ||||||||| | ||| ||||| |||||||||||||||||||    
T  10396102 cctatatctaagcacccgtttgattttgtttttgtcccttaatataaaccccttttcaaattactagat 10396170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 40517974 - 40517906
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||| ||||  ||||| ||||||||||||| ||||||||||| ||||||||||||| |||||    
T  40517974 cctatatctaaacatccatttgactttatttttgtccctaaatgtaaactccttttcaaattattagat 40517906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 207 - 273
Target Start/End: Complemental strand, 25185265 - 25185199
Alignment:
Q  207 tatatctaagca-tcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||| ||| ||| ||| ||||||||||| |||||||||||||||||||||||||||||||    
T  25185265 tatatctaagcactca-tttaattctatttttgtccataaatgtaaacaccttttcaaattactagat 25185199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 655 - 756
Target Start/End: Complemental strand, 6870383 - 6870282
Alignment:
Q  655 attaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgtgatggattttatccgtggatatcca 754  Q
    |||||||||| | ||||||||  ||  ||||||||||| |||||||||||||||||||||| | || ||  || ||| ||||||||||| || |||||||    
T  6870383 attaattaacgggtagttaaattatatgtttattttatccatggatatccattaagatatccgttctgtatccttgaaggattttatccatgcatatcca 6870284  T
Q  755 cg 756  Q
    ||    
T  6870283 cg 6870282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 275
Target Start/End: Original strand, 45283348 - 45283429
Alignment:
Q  195 ctccctccatcct-atatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagatac 275  Q
    |||||||| |||| ||||||||||||   ||||| ||||||||||||||||||||||||  | ||||||||||| |||||||    
T  45283348 ctccctccgtccttatatctaagcatttatttgactttatttttgtccttaaatgtaaattctttttcaaattattagatac 45283429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 4273862 - 4273906
Alignment:
Q  229 tttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||||||||||||||  ||||||||||||||||||    
T  4273862 tttatttttgtccttaaatgtaaacttcttttcaaattactagat 4273906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 273
Target Start/End: Original strand, 5191425 - 5191489
Alignment:
Q  209 tatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||| |  ||| ||||||||||||| | ||||||||||| |||||||||||||||||||    
T  5191425 tatctaagcacctattttattttatttttgttcctaaatgtaaaccccttttcaaattactagat 5191489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 25198522 - 25198455
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||| |  ||||| ||||||||||||| |||||||||||  ||||||||||||||||||    
T  25198522 cctatatctaagcacctatttgactttatttttgtccctaaatgtaaac-tcttttcaaattactagat 25198455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 37141960 - 37141892
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||| |  ||||||||||||||||||| ||| ||||||| | |||||| ||||||||||    
T  37141960 cctatatctaagcaccgatttgattttatttttgtccctaattgtaaaccctttttcacattactagat 37141892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 45183734 - 45183802
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||| ||   |||||||||||||||||||  ||||||||||| |||||| ||||||||||||    
T  45183734 cctatatctaaacacacgtttgattttatttttgtctctaaatgtaaactcctttttaaattactagat 45183802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 441 - 520
Target Start/End: Complemental strand, 7968427 - 7968348
Alignment:
Q  441 tcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataact 520  Q
    ||||| ||||||||| ||||| |  | |||| |||||||||||||||||||| | || ||||||||| ||||||||||||    
T  7968427 tcatcttattcaacaaaaacatagttcttgcatcaacaatcccaaccactttcattttcttttaaaggagcgtaataact 7968348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 12763086 - 12763008
Alignment:
Q  195 ctccctccatcct-atatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||| |||| |||||||| ||||  ||||||||||||||||||| ||||| ||||| ||||| |||||||||||||    
T  12763086 ctccctccgtccttatatctaaacatccatttgattttatttttgtccctaaatctaaac-cctttccaaattactagat 12763008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 207 - 273
Target Start/End: Complemental strand, 885692 - 885626
Alignment:
Q  207 tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||| |  ||||||||||||||||  | ||||| ||||| |||||||||||||||||||    
T  885692 tatatctaagcacccatttgattttatttttggtcctaaatttaaaccccttttcaaattactagat 885626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 223 - 273
Target Start/End: Complemental strand, 7772727 - 7772677
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||| |||||||| ||||| |||||| ||||||||||||||||||    
T  7772727 tttgattttacttttgtccctaaatataaacatcttttcaaattactagat 7772677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 223 - 273
Target Start/End: Original strand, 39543550 - 39543600
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||| ||||||||||||| ||||||||||| | |||||||||||||||||    
T  39543550 tttgactttatttttgtccctaaatgtaaaccctttttcaaattactagat 39543600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 45426096 - 45426154
Alignment:
Q  204 tcctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttca 262  Q
    ||||||||||||||| || |||  ||||||||||||| |||||||||||| ||||||||    
T  45426096 tcctatatctaagcaccaatttagttttatttttgtctttaaatgtaaactccttttca 45426154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 223 - 268
Target Start/End: Complemental strand, 16357203 - 16357158
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattac 268  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||||    
T  16357203 tttgtttttatttttgtccctaaatgtaaaccccttttcaaattac 16357158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 40791004 - 40790955
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactaga 272  Q
    ||||||||||||||||||| |||||||||   ||||||||||||||||||    
T  40791004 tttgattttatttttgtccctaaatgtaatttccttttcaaattactaga 40790955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 38202864 - 38202932
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||| || |  ||||||||||||||||||  || || ||||| |||||||||||||||||||    
T  38202864 cctatatctaaacacccatttgattttatttttgtctctacatataaaccccttttcaaattactagat 38202932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 254
Target Start/End: Complemental strand, 3656133 - 3656102
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaaca 254  Q
    ||||||||||||||||||||||||||||||||    
T  3656133 tttgattttatttttgtccttaaatgtaaaca 3656102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 273
Target Start/End: Complemental strand, 7172450 - 7172384
Alignment:
Q  206 ctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||| ||||  ||||| |||||||| |||| ||||||||| | |||||||||||||||||||    
T  7172450 ctatatctaaccatccatttgactttattttagtccctaaatgtaacc-ccttttcaaattactagat 7172384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 34158132 - 34158085
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattacta 270  Q
    ||||||||||||||||||| ||||||||||  | ||||||||||||||    
T  34158132 tttgattttatttttgtccctaaatgtaaattcattttcaaattacta 34158085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 40807901 - 40807948
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattacta 270  Q
    ||||| |||||||||||||||||||||||||  | |||||||||||||    
T  40807901 tttgactttatttttgtccttaaatgtaaacctcatttcaaattacta 40807948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 253
Target Start/End: Original strand, 5969830 - 5969860
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaac 253  Q
    |||||||||||||||||||||||||||||||    
T  5969830 tttgattttatttttgtccttaaatgtaaac 5969860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 273
Target Start/End: Original strand, 26878618 - 26878668
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||||||| |||||||||||   |||| ||||||||||||    
T  26878618 tttgattttatttttgtccctaaatgtaaacttttttttaaattactagat 26878668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 253
Target Start/End: Original strand, 27679101 - 27679131
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaac 253  Q
    |||||||||||||||||||||||||||||||    
T  27679101 tttgattttatttttgtccttaaatgtaaac 27679131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 253
Target Start/End: Original strand, 31008362 - 31008392
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaac 253  Q
    |||||||||||||||||||||||||||||||    
T  31008362 tttgattttatttttgtccttaaatgtaaac 31008392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 253
Target Start/End: Original strand, 41726185 - 41726215
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaac 253  Q
    |||||||||||||||||||||||||||||||    
T  41726185 tttgattttatttttgtccttaaatgtaaac 41726215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 266
Target Start/End: Original strand, 24512027 - 24512099
Alignment:
Q  195 ctccctccatcc-tatatctaagca-tcagtttgattttatttttgtccttaaatgtaaacaccttttcaaatt 266  Q
    |||||||| ||| |||||||||||| ||| ||||||||||||||||||| ||||||||||  | ||||||||||    
T  24512027 ctccctccgtccatatatctaagcactca-tttgattttatttttgtccctaaatgtaaatcctttttcaaatt 24512099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 245; Significance: 1e-135; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 338 - 757
Target Start/End: Original strand, 3926210 - 3926644
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3926210 cataatattcatacattacaataacaacaaaaatcattgactcaacaaaaacataaataaagtctcttacatttaataaaaataaagttctttgatttaa 3926309  T
Q  438 ---------------agctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactga 522  Q
                   ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||    
T  3926310 caaaagcatgagtaaagctcatcatattcaacgtaaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaatgagcataataactga 3926409  T
Q  523 taacactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcag 622  Q
    |||||||||||||| ||| | |||||||||| |||| |||||| |||||||||||||||||||||||||||| ||| ||||| ||| ||||||||||| |    
T  3926410 taacactcacaatatctatggtgttttcttaggaagttgaatgatattgaggttatttatgtaatttactcgattttatagcgggtatggatatccgcgg 3926509  T
Q  623 ctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccg 722  Q
     ||||||||||||||||||| |||||| || ||||||| | ||  ||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||    
T  3926510 gtgtggataccattaaatccgcatccacatccattaataagcatgtagttaaaaaatccgtttattttatccatagatatccattaagatatccgctccg 3926609  T
Q  723 ttcccgtgatggattttatccgtggatatccacgg 757  Q
    | || |||  |||||||||| | | ||||||||||    
T  3926610 tgcctgtggcggattttatctgcgaatatccacgg 3926644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 338 - 760
Target Start/End: Complemental strand, 39207231 - 39206810
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    |||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39207231 cataatattcatacattacaataacaacaaagatcattgacacaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 39207132  T
Q  438 ---------------agctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactga 522  Q
                   | |||||||||||||||| ||||||| || || |||||||||||||||||||||  |||||||||||||| || |||||||||||    
T  39207131 caaaaacataagtacaactcatcatattcaacaaaaacaaagctcttacttcaacaatcccaaccacttccacttccttttaaaggagtgtaataactga 39207032  T
Q  523 taacactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcag 622  Q
    |||||||||||||||||||| |||||||||| |||| |||||| ||||||| |||||||||||||||||||||||||||||| ||                   
T  39207031 taacactcacaatacctagggtgttttcttaggaagttgaatgatattgagattatttatgtaatttactcggtttaatagcggg--------------- 39206947  T
Q  623 ctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccg 722  Q
     ||||||||||||||||||| ||||| ||| ||||||||| | | ||||||||||||||||||||||||| ||| ||||||||||||| |||| |||| |    
T  39206946 -tgtggataccattaaatccgcatccgtatccattaattagcgggtagttaaaaaatccgtttattttatccatcgatatccattaaggtatccgctctg 39206848  T
Q  723 ttcccgtgatggattttatccgtggatatccacgggtg 760  Q
    | ||||||  |||||||||||| |||||||||||||||    
T  39206847 tgcccgtggcggattttatccgcggatatccacgggtg 39206810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 435 - 720
Target Start/End: Original strand, 42837637 - 42837921
Alignment:
Q  435 taaagctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactgataacactcacaa 534  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||    
T  42837637 taaagctcatcatattcaacataaacaaagtttttgcttcaacaatcccaaccactttcacttccttttaaaggagcgtaataactgataacactcataa 42837736  T
Q  535 tacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggatacca 634  Q
    || ||||| ||||||||||  ||| |||||| ||| ||| |||||||||||||||||||||||||||||| ||| | |||||| || | ||||||||| |    
T  42837737 tatctagggtgttttcttagaaagttgaatgatatggagattatttatgtaatttactcggtttaatagcgggtatagatatctgcgggtgtggatacta 42837836  T
Q  635 ttaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctc 720  Q
    |||||||  |||   | | ||||| ||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||    
T  42837837 ttaaatctgcat-agtgtccattatttaacggatagttaaaaaatccgtttattttatccatagatatccattaagatatccgctc 42837921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 338 - 760
Target Start/End: Complemental strand, 35188707 - 35188301
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatt--- 434  Q
    ||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||       
T  35188707 cataatattcataaattacaataacaacaaagatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttatttgatttaa 35188608  T
Q  435 ------------taaagctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactga 522  Q
                |||||||||| |||||||||||||| ||| ||||||||||||||||| |||| ||||| | ||| |||||||| ||| ||||||||||    
T  35188607 caaaatcataagtaaagctcattatattcaacataaataaagcttttgcttcaacaatctcaacaactttcatttcattttaaaggagcataataactga 35188508  T
Q  523 taacactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcag 622  Q
    ||||||||||||||||||               ||| |||||| |||||||||||||||||||||||||||||||||||||| ||                   
T  35188507 taacactcacaataccta---------------aagttgaatgatattgaggttatttatgtaatttactcggtttaatagcggg--------------- 35188438  T
Q  623 ctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccg 722  Q
     ||||||||||| ||||||| ||||| ||| ||||||||| | | ||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||    
T  35188437 -tgtggataccactaaatccgcatccgtatccattaattagcgggtagttaaaaaatccgtttattttatccatggatatccattaaggtatccgctccg 35188339  T
Q  723 ttcccgtgatggattttatccgtggatatccacgggtg 760  Q
    |  |||||  |||||||||||| ||||||| |||||||    
T  35188338 tgtccgtggcggattttatccgcggatatctacgggtg 35188301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 338 - 715
Target Start/End: Original strand, 23429250 - 23429643
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    ||||||||||||| || ||||||| |||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  23429250 cataatattcatatatcacaataacaacaaagatcatttactcaacaaaaacataaataaagtccgttacatttaataaaaataaagttatttgatttaa 23429349  T
Q  438 ---------------agctcatcatattcaacataaacaaaacttttgcttcaacaatcccaa-------ccacttttacttccttttaaagtagcgtaa 515  Q
                   | |||| |||||||||| |||||||| |||||||||||||||||| ||       ||||||| |||||||||||||| |||||||    
T  23429350 caaaaacgtaagtaaaactcaccatattcaacgtaaacaaagcttttgcttcaacaatcctaatttcgaaccactttcacttccttttaaagaagcgtaa 23429449  T
Q  516 taactgataacactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggata 615  Q
    ||||||||||| |||||||||| ||||  ||||||||| |||| |||||| || |||||||||||||||||||||||| |||||||||| |||    | |    
T  23429450 taactgataaccctcacaatacttagggagttttcttaggaagttgaatgatactgaggttatttatgtaatttactcagtttaatagcgggt----aaa 23429545  T
Q  616 tccgcagctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatc 715  Q
    |  || | |||| |||||||||||||| ||||  ||| ||||||||| |   |||||||||||||||||||| |||||||||||||||||||||||||||    
T  23429546 t--gcgggtgtgaataccattaaatccgcatctgtatccattaattagcgagtagttaaaaaatccgtttatgttattcatggatatccattaagatatc 23429643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 471 - 720
Target Start/End: Complemental strand, 42878916 - 42878668
Alignment:
Q  471 cttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactgataacactcacaatacctaggctgttttcttaagaaggtgaatggtatt 570  Q
    ||||||||||| |||||||||| |||||||||||||| |||||||||||| ||||| || ||||| |||||| | ||||||||  ||| |||||||||||    
T  42878916 cttcaacaatctcaaccactttcacttccttttaaaggagcgtaataactaataacgctaacaatgcctaggtt-ttttcttagaaagttgaatggtatt 42878818  T
Q  571 gaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattcattaattaacagatag 670  Q
     ||||||||||||||||||||||||||||||||| ||| ||||||||||| | ||||||||||||||||||| ||| ||||| ||||||||||  | ||     
T  42878817 aaggttatttatgtaatttactcggtttaatagcgggtatggatatccgcgggtgtggataccattaaatccgcattcatatccattaattaatgggtat 42878718  T
Q  671 ttaaaaaatccgtttattttattcatggatatccattaagatatctgctc 720  Q
    ||||||||||||||||||||||  |||||||| ||||||  |||||||||    
T  42878717 ttaaaaaatccgtttattttatctatggatattcattaaagtatctgctc 42878668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 461 - 615
Target Start/End: Complemental strand, 33742675 - 33742521
Alignment:
Q  461 aaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactgataacactcacaatacctaggctgttttcttaagaaggt 560  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||| ||  |||||||| |||||||| |||||||||||| |||||||||| |||| |    
T  33742675 aaaacttttgcttcaacaatctcaaccactttcacttccttttaaaggagtataataactaataacacttacaatacctagggtgttttcttaggaagtt 33742576  T
Q  561 gaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggata 615  Q
    ||||| |||| |||||||||||||||||||||| |||||||||| ||||||||||    
T  33742575 gaatgatattaaggttatttatgtaatttactctgtttaatagcgggtgtggata 33742521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 15 - 159
Target Start/End: Original strand, 40978926 - 40979070
Alignment:
Q  15 aatatcatctataggtgtattttcctaaaaataaatcatttataaatttaatatgtcgnnnnnnnataaaagnnnnnnnttgtaatgtgtaaacttattc 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||       |||||||||||||||||||||    
T  40978926 aatatcatctataggtgtattttcctaaaaataaatcatttataaatttaatatgtcgtttttttataaaagaaaaaaattgtaatgtgtaaacttattc 40979025  T
Q  115 atgactcatcgaacacgtggttaaactgacacatgatatcaaatg 159  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  40979026 atgactcatcgaacacgtggttaaactgacacatggtatcaaatg 40979070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 555 - 757
Target Start/End: Complemental strand, 39800327 - 39800125
Alignment:
Q  555 gaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattc 654  Q
    |||| |||| || ||| ||| |||||| |||||| |||| |||||||||| |||| |||||||||| | ||  ||||||||||||||| ||||| ||| |    
T  39800327 gaagttgaaaggcattaaggatatttacgtaattcactcagtttaatagcgggtgcggatatccgcgggtgcagataccattaaatccgcatccgtatcc 39800228  T
Q  655 attaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgtgatggattttatccgtggatatcca 754  Q
    |||||||| | | ||||||||| |||| |||||||||| | ||||||||||||||| |||| |||||||  |||||  |||||||||||| |||||||||    
T  39800227 attaattagcgggtagttaaaatatccatttattttatccgtggatatccattaaggtatccgctccgtgtccgtggcggattttatccgcggatatcca 39800128  T
Q  755 cgg 757  Q
    |||    
T  39800127 cgg 39800125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 340 - 429
Target Start/End: Complemental strand, 42879006 - 42878917
Alignment:
Q  340 taatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctt 429  Q
    |||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42879006 taatattcatacattacaataacaacaaagatcattaactcaacaaaaacataaataaagtcccttacacttaataaaaataaagttctt 42878917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 364 - 517
Target Start/End: Original strand, 2209575 - 2209741
Alignment:
Q  364 acaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgat------------ttaaagctcatcatattc 451  Q
    ||||| |||||||||||||||||||||||| ||| || ||||| ||||||||||||||||||||||||||             ||||||| |||||||||    
T  2209575 acaaagatcattgactcaacaaaaacataattaacgttccttatatttaataaaaataaagttctttgatctgaaaaattaaataaagcttatcatattc 2209674  T
Q  452 aacataaacaaaactt-ttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaata 517  Q
    |||| ||||||| ||| |||||||||||||||| ||||||||  |||| |||||||| |||||||||    
T  2209675 aacaaaaacaaagcttcttgcttcaacaatcccgaccactttcccttcattttaaaggagcgtaata 2209741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 627 - 757
Target Start/End: Original strand, 40057171 - 40057301
Alignment:
Q  627 ggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcc 726  Q
    |||||||||||||||| ||||| ||| ||||||||| | | ||||||||| |||  |||||||||| | | ||||||||||||| |||| |||||||  |    
T  40057171 ggataccattaaatccgcatccgtatccattaattagcgggtagttaaaatatctatttattttatccgtagatatccattaaggtatccgctccgtgtc 40057270  T
Q  727 cgtgatggattttatccgtggatatccacgg 757  Q
    ||||  |||||||||||| ||||||||||||    
T  40057271 cgtggcggattttatccgcggatatccacgg 40057301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 338 - 616
Target Start/End: Original strand, 26621390 - 26621673
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttac--atttaataaaa--ataaagttctttgat 433  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||  |||||  |||||| ||||  |||||              
T  26621390 cataatattcatacattacaataacaaaaaaaattattgactcaacaaaaacataaataaagtttcttactgatttaacaaaagcataaa---------- 26621479  T
Q  434 ttaaagctcatcatattcaacataaacaaaactt-ttgcttcaacaatcccaaccacttttactt-----------ccttttaaagtagcgtaataactg 521  Q
     ||||||||||||||||| ||| |||||||  || |||||||||||||| | |||||||| ||||            |||  | ||| | ||||||| ||    
T  26621480 -taaagctcatcatattctaca-aaacaaagtttcttgcttcaacaatctcgaccactttcacttgtgtagtacaaacttgaacagtcgtgtaataattg 26621577  T
Q  522 ataacactcacaatacctagg-ctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatat 616  Q
    ||||||||||||||||| |||  | |||||||| |||| |||| |||||| ||||||||| ||||||||||||| |||||||| |||| |||||||    
T  26621578 ataacactcacaataccgaggttttttttcttaggaagttgaaaggtattaaggttatttgtgtaatttactcgatttaatagtaggtatggatat 26621673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 15898332 - 15898400
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||||| |||||| ||||||||||||| ||||| ||||| | |||||||||||||||||    
T  15898332 cctatatctaagcatccgtttgactttatttttgtccctaaatataaactctttttcaaattactagat 15898400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 25690523 - 25690591
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||| |  ||||||||||||||||||| ||||||||||| ||||||||| |||||||||    
T  25690523 cctatatctaagcacccatttgattttatttttgtccctaaatgtaaaccccttttcaacttactagat 25690591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 39690356 - 39690424
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||| |||||| |  ||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  39690356 cctatatgtaagcacccatttgattttatttttgtccctaaatgtaaactccttttcaaattactagat 39690424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 36177538 - 36177459
Alignment:
Q  195 ctccctccatcc-tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||| ||| ||||||||||||||  ||||||||||||||||||| ||||||||||  | |||||||||||||||||    
T  36177538 ctccctccgtccatatatctaagcatccatttgattttatttttgtccctaaatgtaaattcattttcaaattactagat 36177459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 363 - 434
Target Start/End: Original strand, 40057002 - 40057073
Alignment:
Q  363 aacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatt 434  Q
    |||||||||| ||||||||| ||||||||||||||||| |  ||||||||||| ||||||| ||||||||||    
T  40057002 aacaaaaatccttgactcaataaaaacataaataaagttcactacatttaatagaaataaaattctttgatt 40057073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 223 - 273
Target Start/End: Original strand, 20975693 - 20975743
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  20975693 tttgattttatttttgttcttaaatgtaaactccttttcaaattactagat 20975743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 205 - 270
Target Start/End: Original strand, 35568875 - 35568940
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattacta 270  Q
    ||||||||||||||||  ||| ||||||||||||||| ||| ||||||| ||||||||||||||||    
T  35568875 cctatatctaagcatccatttaattttatttttgtccctaattgtaaaccccttttcaaattacta 35568940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 582 - 715
Target Start/End: Original strand, 39886941 - 39887074
Alignment:
Q  582 tgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatcc 681  Q
    ||||||||||||  | ||||||| |||  ||||| |||| | ||| |||||||| |||||  ||||  ||| ||||||||| ||| ||||| ||| || |    
T  39886941 tgtaatttactctatataatagcgggtacggatacccgcgggtgtagataccatgaaatctgcatctgtatccattaattagcaggtagttgaaatattc 39887040  T
Q  682 gtttattttattcatggatatccattaagatatc 715  Q
    ||||||||||| |||| |||||||||||||||||    
T  39887041 gtttattttatccatgtatatccattaagatatc 39887074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 12895050 - 12895117
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||  |||||||| ||| |||||    
T  12895050 cctatatctaagcatca-tttaattttatttttgtccttaaatgtaaacctcttttcaacttattagat 12895117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 36750646 - 36750714
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||| || |||||  ||||||||||||||||||| ||||| ||||| |||||||||||||||||||    
T  36750646 cctatatttaggcatccatttgattttatttttgtccctaaatataaacgccttttcaaattactagat 36750714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 338 - 434
Target Start/End: Complemental strand, 39800531 - 39800435
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatt 434  Q
    ||||||||  ||| |||| || || |||||| ||| ||||||||| ||||||||||||||||| |  ||||||||||| ||||||| ||||||||||    
T  39800531 cataatatcgatagattataacaacaacaaagatccttgactcaataaaaacataaataaagttcactacatttaatagaaataaaattctttgatt 39800435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 207 - 270
Target Start/End: Original strand, 43060087 - 43060151
Alignment:
Q  207 tatatctaagcatcagtttgattttatttttgtccttaaatgt-aaacaccttttcaaattacta 270  Q
    ||||||||||||||  ||||||||||||||||||| ||||||| |||| ||||||||||||||||    
T  43060087 tatatctaagcatccatttgattttatttttgtccctaaatgtaaaactccttttcaaattacta 43060151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 206 - 273
Target Start/End: Complemental strand, 21912353 - 21912286
Alignment:
Q  206 ctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||| |||||| |  ||||||||||||||||||| ||||||||||| |||||||||||||| ||||    
T  21912353 ctatatataagcacccatttgattttatttttgtccctaaatgtaaactccttttcaaattacaagat 21912286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 3630990 - 3631056
Alignment:
Q  207 tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||| ||||  ||||||||||||||| | ||||||||||||| | |||||||||||||||||    
T  3630990 tatatctaaacatccatttgattttatttttattcttaaatgtaaactctttttcaaattactagat 3631056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 205 - 267
Target Start/End: Original strand, 25017541 - 25017603
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaatta 267  Q
    |||||||||||||||   ||||| ||||||||||||||||||||||||| || ||||||||||    
T  25017541 cctatatctaagcattcatttgactttatttttgtccttaaatgtaaaccccctttcaaatta 25017603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 223 - 273
Target Start/End: Complemental strand, 27642718 - 27642668
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||||||| ||||| ||||| |||||||||||||||||||    
T  27642718 tttgattttatttttgtccataaatataaactccttttcaaattactagat 27642668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 654 - 752
Target Start/End: Complemental strand, 33742498 - 33742401
Alignment:
Q  654 cattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgtgatggattttatccgtggatatc 752  Q
    ||||||||||| |||||||||||||||| |||||||||| |||||||||| |||||| ||||  |||| |  |||||  |||||||||||  |||||||    
T  33742498 cattaattaac-gatagttaaaaaatccatttattttatccatggatatcaattaaggtatccactccatgtccgtggaggattttatccacggatatc 33742401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 223 - 268
Target Start/End: Complemental strand, 18032811 - 18032766
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattac 268  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||    
T  18032811 tttgattttatttttgtccttaaatgtaaagcccttttcaaattac 18032766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 275
Target Start/End: Complemental strand, 7510755 - 7510703
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagatac 275  Q
    ||||| |||||| |||||| ||||||||||| |||||||||||||||||||||    
T  7510755 tttgactttattattgtccctaaatgtaaacgccttttcaaattactagatac 7510703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 269
Target Start/End: Complemental strand, 27588074 - 27588011
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattact 269  Q
    ||||||||||| || || ||||||||||||||||||| ||||||||||| ||||| |||||||||    
T  27588074 cctatatctaaacacca-tttgattttatttttgtccgtaaatgtaaacccctttccaaattact 27588011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 338 - 400
Target Start/End: Complemental strand, 33742829 - 33742765
Alignment:
Q  338 cataatattcatacattacaataataacaaa-aatcattgactcaacaaaaac-ataaataaagt 400  Q
    |||||||||||||||||||||||| || ||| |||||||||||||| |||||| |||||||||||    
T  33742829 cataatattcatacattacaataacaataaagaatcattgactcaataaaaacaataaataaagt 33742765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 371 - 423
Target Start/End: Original strand, 39886812 - 39886864
Alignment:
Q  371 tcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaa 423  Q
    |||| ||||||||||||||||||||||||| | |||| |||||||||||||||    
T  39886812 tcatagactcaacaaaaacataaataaagttcattacgtttaataaaaataaa 39886864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 218 - 273
Target Start/End: Original strand, 40979093 - 40979148
Alignment:
Q  218 atcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||||||||| ||| ||||||||||  |||||||||||| ||||||    
T  40979093 atcagtttgattttatttttatccctaaatgtaaagcccttttcaaatttctagat 40979148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 223 - 273
Target Start/End: Original strand, 5151089 - 5151139
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||||||| ||||||||||| || ||| ||||||||||||    
T  5151089 tttgattttatttttgtccctaaatgtaaactccctttgaaattactagat 5151139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 223 - 273
Target Start/End: Complemental strand, 27925489 - 27925439
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||| ||||||||||||| ||||||||||  |||||||||||||||||||    
T  27925489 tttgactttatttttgtccctaaatgtaaatcccttttcaaattactagat 27925439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 3558886 - 3558965
Alignment:
Q  195 ctccctccatcc-tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||| |||||||| ||| |  ||| ||||||||||||||| ||||| ||| |  ||||||||||||||||||    
T  3558886 ctccctccatccctatatctaggcacctattttattttatttttgtccctaaatataaccctcttttcaaattactagat 3558965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 254
Target Start/End: Complemental strand, 35758301 - 35758270
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaaca 254  Q
    ||||||||||||||||||||||||||||||||    
T  35758301 tttgattttatttttgtccttaaatgtaaaca 35758270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 253
Target Start/End: Original strand, 6514308 - 6514338
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaac 253  Q
    |||||||||||||||||||||||||||||||    
T  6514308 tttgattttatttttgtccttaaatgtaaac 6514338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 253
Target Start/End: Original strand, 8760931 - 8760961
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaac 253  Q
    |||||||||||||||||||||||||||||||    
T  8760931 tttgattttatttttgtccttaaatgtaaac 8760961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 273
Target Start/End: Original strand, 36347489 - 36347539
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||||||| ||||||||||   |||||||||||| |||||    
T  36347489 tttgattttatttttgtccataaatgtaaatttcttttcaaattattagat 36347539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 253
Target Start/End: Original strand, 36745694 - 36745724
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaac 253  Q
    |||||||||||||||||||||||||||||||    
T  36745694 tttgattttatttttgtccttaaatgtaaac 36745724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 253
Target Start/End: Complemental strand, 38040899 - 38040869
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaac 253  Q
    |||||||||||||||||||||||||||||||    
T  38040899 tttgattttatttttgtccttaaatgtaaac 38040869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 253
Target Start/End: Complemental strand, 40144180 - 40144150
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaac 253  Q
    |||||||||||||||||||||||||||||||    
T  40144180 tttgattttatttttgtccttaaatgtaaac 40144150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 10523143 - 10523209
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||| |  ||||| ||||||||||||| |||||||||  || ||||||||||| |||||    
T  10523143 cctatatctaagcacccatttgactttatttttgtccataaatgtaa--actttttcaaattattagat 10523209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 212; Significance: 1e-116; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 338 - 715
Target Start/End: Complemental strand, 31576055 - 31575663
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31576055 cataatattcatacattacaataataacaaagatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttttttgatttaa 31575956  T
Q  438 ---------------agctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactga 522  Q
                   || |||||||||||||||||||| || |||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  31575955 caaaaacataagtaaagttcatcatattcaacataaaccaagcttttgattcaacaatcccaaccactttcacttccttttaaag-agcgtaataactga 31575857  T
Q  523 taacactcacaatacctaggctgttttctta-agaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgca 621  Q
    |||||||||||||||||||  |||||||||| | ||| |||||| |||||||||||||||||||||||||| ||||||||||| | | |||||||||||     
T  31575856 taacactcacaatacctagagtgttttcttagaaaagttgaatgatattgaggttatttatgtaatttacttggtttaatagcggatatggatatccgct 31575757  T
Q  622 gctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatc 715  Q
    | ||||||||| ||||||||| ||||| ||| ||||||||| | | |||||| ||||| |||||||||||| |||| |||||||||||||||||    
T  31575756 ggtgtggatacaattaaatccgcatccgtatccattaattagcgggtagttacaaaattcgtttattttatccatgcatatccattaagatatc 31575663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 338 - 681
Target Start/End: Original strand, 13807561 - 13807919
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgattta- 436  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||     
T  13807561 cataatattcatacattacaataacaacaaagatcattgactcaacaaaaacataaataaagtctcttacattcaataaaaataaagttctttgatttag 13807660  T
Q  437 --------------aagctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactga 522  Q
                  ||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||| |||||||| ||||||||||||||    
T  13807661 caaaaacataagtaaagttcatcatattcaacataaacaaagcttttgcttcaacaatccaaaccactttcacttcattttaaaggagcgtaataactga 13807760  T
Q  523 taacactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcag 622  Q
    |||||||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| ||||||||| ||||||||||| ||| ||||||||||| |    
T  13807761 taacactcacaatacctagggtgttttcttaggaagttgaatgatattgaggttatttatataatttacttggtttaatagcgggtatggatatccgcgg 13807860  T
Q  623 ctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatcc 681  Q
     ||||||||||||||||||||||||| ||| ||||||| | | | ||||||||||||||    
T  13807861 gtgtggataccattaaatccacatccgtatccattaataagcgggtagttaaaaaatcc 13807919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 338 - 751
Target Start/End: Original strand, 5110224 - 5110652
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  5110224 cataatattcatacattacaataacaacaaagatcattgactcaacaaaaacataaataatgtcccttacatttaataaaaataaagttatttgatttaa 5110323  T
Q  438 ---------------agctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactga 522  Q
                   | |||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||| ||||||||| |||||||||| |||    
T  5110324 caaaaatataagtaaaactcatcatattcaacaaaaacaaagcttttgcttcaacaatcccaaccactttcactttcttttaaaggagcgtaataattga 5110423  T
Q  523 taacactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcag 622  Q
    ||||||||||||||||||   ||||||||||  ||| |||||| |||||||||||||||||||||||| | ||||||||||| ||| |||||||| || |    
T  5110424 taacactcacaatacctatcgtgttttcttagaaagttgaatgatattgaggttatttatgtaatttatttggtttaatagcgggtatggatatctgcgg 5110523  T
Q  623 ctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccg 722  Q
     ||||||||||||||||||| ||| | ||| ||||||||| | | |||||||||||| | |||||||||| ||||||||||||||||| |||| |||| |    
T  5110524 gtgtggataccattaaatccgcattcgtatccattaattagcgggtagttaaaaaattcatttattttatccatggatatccattaaggtatccgctctg 5110623  T
Q  723 ttcccgtgatggattttatccgtggatat 751  Q
    |  |||||   ||||||||||| ||||||    
T  5110624 tgtccgtggcagattttatccgcggatat 5110652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 338 - 757
Target Start/End: Original strand, 5704619 - 5705047
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||    
T  5704619 cataatattcatacattacaataacaacaaagatcattgactcaacaaaaatataaataaagtcacttacatttaataaaaataaagttatttgatttaa 5704718  T
Q  438 ---------------agctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactga 522  Q
                   |||||||||||||||||| |||||||      |||||||| |||||||||| ||| ||||| |||||||  | |||||||||| |    
T  5704719 caaaaacataagtaaagctcatcatattcaacaaaaacaaa------gcttcaacgatcccaaccattttcacttctttttaaaagaacgtaataactaa 5704812  T
Q  523 taacactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcag 622  Q
    |||||||||||||||||||| |||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||| | || ||||  || |    
T  5704813 taacactcacaatacctagggtgttttcttaggaagttgaatgatattgaggttatttatgtaatttactcggtttaatagcagatatgaatatttgcgg 5704912  T
Q  623 ctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccg 722  Q
     ||||||||||||||||||||||||| ||| ||||||||| | |||||||||||||||| |||||||||| || |||||| ||||||| |||| | ||||    
T  5704913 gtgtggataccattaaatccacatccgtatccattaattagcggatagttaaaaaatccatttattttatccacggatatacattaaggtatccgttccg 5705012  T
Q  723 ttcccgtgatggattttatccgtggatatccacgg 757  Q
    | ||||||  |||||||||||| ||||||||||||    
T  5705013 tgcccgtggcggattttatccgcggatatccacgg 5705047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 338 - 715
Target Start/End: Complemental strand, 45151352 - 45150961
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    |||||||||||||||||||||||| |||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  45151352 cataatattcatacattacaataacaacaaagatcattgattcaacaaaaacataaacaaagtcccttacatttaataaaaataaaattctttgatttaa 45151253  T
Q  438 ---------------agctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactga 522  Q
                   ||||||||||||| | ||||||| ||  ||||||||||||||||||||||||||| |||| ||| ||||| ||||||||||| ||    
T  45151252 caaaaatataagtaaagctcatcatatttagcataaaccaagtttttgcttcaacaatcccaaccactttcactttcttataaaggagcgtaataaccga 45151153  T
Q  523 taacactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcag 622  Q
    |||||||||||||||| | | |||||||| | |||| |||||| |||||||||||||||||||||||||||||||||||||| | | |||||||| |  |    
T  45151152 taacactcacaataccgaag-tgttttctaaggaagttgaatgatattgaggttatttatgtaatttactcggtttaatagcggatatggatatctgtgg 45151054  T
Q  623 ctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatc 715  Q
     ||||||||||||||||||| ||||  ||| ||||||||| | ||||||||||||||||||||||||||| |||||||||| |||||| ||||    
T  45151053 gtgtggataccattaaatccgcatctgtatccattaattagcggatagttaaaaaatccgtttattttatccatggatatctattaaggtatc 45150961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 349 - 760
Target Start/End: Complemental strand, 13626417 - 13625990
Alignment:
Q  349 tacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa----------- 437  Q
    ||||||||||||| | |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||               
T  13626417 tacattacaataacaccaaagatcattgactcaacaaaaacataaataaagtccctaacatttaataaaaataaagttcttcgatttaacaaaaaacata 13626318  T
Q  438 -----agctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactgataacactcac 532  Q
         || ||||||||||| ||| ||||||| || ||||||||||| ||||||||||||| |||||||||||||| |||||||||| ||||||||||||     
T  13626317 agtaaagttcatcatattcgacaaaaacaaagctcttgcttcaacattcccaaccactttcacttccttttaaaggagcgtaataattgataacactcat 13626218  T
Q  533 aatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggatac 632  Q
    |||||||| | |||||||||| |||| |||||| |||||||||||||||||||| |||  |||||||||||  ||| ||||||| ||| | ||| |||||    
T  13626217 aatacctaaggtgttttcttaggaagttgaatgatattgaggttatttatgtaacttatccggtttaatagagggtatggatattcgcgggtgtagatac 13626118  T
Q  633 cattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgtgat 732  Q
    |||||||||| ||||| ||| ||||||||| | | ||||||||||||| ||||||||||| ||| ||||||||||||| |||| ||| ||  |||||| |    
T  13626117 cattaaatccgcatccgtatccattaattagcgggtagttaaaaaatctgtttattttatccatagatatccattaaggtatccgcttcgcgcccgtggt 13626018  T
Q  733 ggattttatccgtggatatccacgggtg 760  Q
    | ||||||||||||||||| || |||||    
T  13626017 gaattttatccgtggatattcaggggtg 13625990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 338 - 437
Target Start/End: Original strand, 5938744 - 5938843
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5938744 catagtattcatacattacaataacaacaaagatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttatttgatttaa 5938843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 544 - 755
Target Start/End: Original strand, 5938914 - 5939125
Alignment:
Q  544 tgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatcca 643  Q
    |||||||||  |||| |||||| ||||||||| ||||||||||| |||||||||||||||| ||| ||||||||||| | ||| |||||||||||||||     
T  5938914 tgttttcttcggaagttgaatgatattgaggtaatttatgtaatatactcggtttaatagcgggtatggatatccgcgggtgtagataccattaaatccg 5939013  T
Q  644 catccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgtgatggattttatcc 743  Q
    |||   ||| ||||||||| | | |||||||||||||| |||||| ||| |||| |||||||||||| |||  ||||| |  |||||| ||||||||||     
T  5939014 catttgtatccattaattagcgggtagttaaaaaatccatttattatatccatgaatatccattaaggtattcgctccatgtccgtgacggattttatct 5939113  T
Q  744 gtggatatccac 755  Q
      ||||||||||    
T  5939114 acggatatccac 5939125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 627 - 757
Target Start/End: Complemental strand, 42622479 - 42622349
Alignment:
Q  627 ggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcc 726  Q
    |||||||||||||||| ||||| ||||||||||||||| | ||||||||| |||| |||||||||| | ||||||||||||||| |||| | |||||  |    
T  42622479 ggataccattaaatccgcatccgtattcattaattaacgggtagttaaaatatccatttattttatccgtggatatccattaaggtatccgttccgtgtc 42622380  T
Q  727 cgtgatggattttatccgtggatatccacgg 757  Q
    ||||| |||||||||||| ||||||||||||    
T  42622379 cgtgacggattttatccgcggatatccacgg 42622349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 27297822 - 27297743
Alignment:
Q  195 ctccctccatcc-tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||| |||||||||| | || ||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  27297822 ctccctccatccctatatctaagtaccaatttgattttatttttgtccttaaatgtaaactccttttcaaattagtagat 27297743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 3237949 - 3237881
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||||  ||||||||||||||||||| ||||||||||| |||||| ||||||||||||    
T  3237949 cctatatctaagcatccatttgattttatttttgtccctaaatgtaaactcctttttaaattactagat 3237881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 206 - 273
Target Start/End: Complemental strand, 534698 - 534631
Alignment:
Q  206 ctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||| ||||||||  |||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  534698 ctatatttaagcatccatttgattttatttttgtccttaaatgtaaacctcttttcaaattactagat 534631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 207 - 273
Target Start/End: Complemental strand, 44424825 - 44424759
Alignment:
Q  207 tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||  ||||||||||||||||||| ||||||||||| | |||||||||||||||||    
T  44424825 tatatctaagcatccatttgattttatttttgtccctaaatgtaaaccctttttcaaattactagat 44424759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 17663858 - 17663790
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||| |||||| |  ||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  17663858 cctatatgtaagcacccatttgattttatttttgtccctaaatgtaaactccttttcaaattactagat 17663790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 20362216 - 20362148
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||| |||||| |  ||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  20362216 cctatatgtaagcacccatttgattttatttttgtccctaaatgtaaactccttttcaaattactagat 20362148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 206 - 273
Target Start/End: Complemental strand, 34330233 - 34330166
Alignment:
Q  206 ctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||| ||||  ||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  34330233 ctatatctaaacatctatttgattttatttttgtctataaatgtaaactccttttcaaattactagat 34330166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 207 - 273
Target Start/End: Complemental strand, 27749699 - 27749633
Alignment:
Q  207 tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||| |  ||||||||||||||||||| ||||||||||| |||||||||||||| ||||    
T  27749699 tatatctaagcacccatttgattttatttttgtccctaaatgtaaactccttttcaaattacaagat 27749633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 31644316 - 31644382
Alignment:
Q  207 tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||| |  ||||||||||||||||||| ||||||||||| | |||||||||||||||||    
T  31644316 tatatctaagcacccatttgattttatttttgtccctaaatgtaaactcattttcaaattactagat 31644382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 338 - 400
Target Start/End: Complemental strand, 45458504 - 45458442
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagt 400  Q
    |||||||| |||||||||| |||| |||||| |||||||| ||||||||||||||||||||||    
T  45458504 cataatatccatacattaccataacaacaaagatcattgattcaacaaaaacataaataaagt 45458442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 15851765 - 15851698
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||  || ||||||||||||||| ||| ||||||||||| |||||||||||||||||||    
T  15851765 cctatatctaagcccca-tttgattttatttttctccctaaatgtaaactccttttcaaattactagat 15851698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 37355271 - 37355203
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||| |  ||||||||||||||||||  ||||| ||||| |||||||||||||||||||    
T  37355271 cctatatctaagcacccatttgattttatttttgtctctaaatataaaccccttttcaaattactagat 37355203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 338 - 434
Target Start/End: Complemental strand, 42625143 - 42625047
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatt 434  Q
    ||||||||  ||| |||| || || |||||| ||| ||||||||| ||||||||||||||||| |  ||||||||||| ||||||| ||||||||||    
T  42625143 cataatatcgatagattataacaacaacaaagatccttgactcaataaaaacataaataaagttcactacatttaatagaaataaaattctttgatt 42625047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 45150631 - 45150683
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagatac 275  Q
    ||||||||||||||||||| ||||||||||| |||||||||||| ||||||||    
T  45150631 tttgattttatttttgtccctaaatgtaaactccttttcaaattgctagatac 45150683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 7278486 - 7278552
Alignment:
Q  207 tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||| || ||||||||||||||| ||  ||||||||||  |||||||||||||||||||    
T  7278486 tatatctaagcaccaatttgattttatttttatctctaaatgtaaatcccttttcaaattactagat 7278552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 624 - 718
Target Start/End: Original strand, 14701486 - 14701580
Alignment:
Q  624 tgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgc 718  Q
    |||||||||||| |||||| ||||| ||| ||| || | || ||||||| |||  |||||||||||||| |||| ||||| ||||||||||||||    
T  14701486 tgtggataccatcaaatccgcatccgtatccatcaaatcacggatagttgaaatgtccgtttattttatccatgaatatctattaagatatctgc 14701580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 223 - 273
Target Start/End: Complemental strand, 41865931 - 41865881
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||||| | ||||||||||||||||||||||||| |||||    
T  41865931 tttgattttatttttgttcctaaatgtaaacaccttttcaaattattagat 41865881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 275
Target Start/End: Original strand, 1246272 - 1246353
Alignment:
Q  195 ctccctccatcct-atatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagatac 275  Q
    ||||||||||||| |||||||| ||||  ||| |||||||||||| |||||||| |||||  ||||||||||||||| ||||    
T  1246272 ctccctccatccttatatctaaacatccatttaattttatttttgcccttaaatataaaccacttttcaaattactaaatac 1246353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 273
Target Start/End: Original strand, 28264844 - 28264892
Alignment:
Q  225 tgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||||||| |||||||||  ||||||||||||||||||    
T  28264844 tgattttatttttgtcctttaatgtaaacctcttttcaaattactagat 28264892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 227 - 275
Target Start/End: Original strand, 40345969 - 40346017
Alignment:
Q  227 attttatttttgtccttaaatgtaaacaccttttcaaattactagatac 275  Q
    ||||||||||||| | ||||||||||| |||||||||||||||||||||    
T  40345969 attttatttttgttcctaaatgtaaactccttttcaaattactagatac 40346017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 206 - 273
Target Start/End: Complemental strand, 4034059 - 4033992
Alignment:
Q  206 ctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||| ||||  |||||||||||||| |||||||||||||| | |||||  ||||||||||||    
T  4034059 ctatatctaaacatccatttgattttattttagtccttaaatgtaatcccctttctaaattactagat 4033992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 25731077 - 25731123
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattacta 270  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  25731077 tttgactttatttttgtccttaaatgtaaac-ccttttcaaattacta 25731123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 41327664 - 41327743
Alignment:
Q  195 ctccctccatcc-tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||| ||| |||||||||||| |  ||||| ||||||||||||| ||||||||||   ||||||||||||||||||    
T  41327664 ctccctccgtccatatatctaagcacccatttgactttatttttgtccataaatgtaaatctcttttcaaattactagat 41327743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 44421978 - 44421899
Alignment:
Q  195 ctccctccatcc-tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||| |||||||||||| |  ||||||||||||||||||  ||||||||||| |||||  |||||| |||||    
T  44421978 ctccctccatccctatatctaagcacctatttgattttatttttgtctctaaatgtaaacccctttctaaattattagat 44421899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 4398457 - 4398523
Alignment:
Q  207 tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||   ||||| ||||||||||| | ||||||||||| | |||||||||||||||||    
T  4398457 tatatctaagcattcatttgactttatttttgttcctaaatgtaaaccctttttcaaattactagat 4398523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 223 - 273
Target Start/End: Complemental strand, 11071885 - 11071835
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||| ||||||||||||| ||||| ||||| |||||||||||||||||||    
T  11071885 tttgactttatttttgtccctaaatctaaactccttttcaaattactagat 11071835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 274
Target Start/End: Complemental strand, 24775099 - 24775030
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagata 274  Q
    ||||||| ||||||||  ||||||||||||||||||| ||||| ||||   |||||| ||||||||||||    
T  24775099 cctatatttaagcatccatttgattttatttttgtccctaaatttaaatctcttttcgaattactagata 24775030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 270
Target Start/End: Complemental strand, 28734057 - 28733992
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattacta 270  Q
    |||||||||||||| |  ||||| ||||||||||||| ||||| |||||  |||||||||||||||    
T  28734057 cctatatctaagcacccatttgactttatttttgtccctaaatctaaacctcttttcaaattacta 28733992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 8064962 - 8065014
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagatac 275  Q
    ||||| |||||| |||||| ||||||||||| || ||||||||||||||||||    
T  8064962 tttgactttattattgtccctaaatgtaaaccccctttcaaattactagatac 8065014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 41665942 - 41665874
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||  |  ||||| ||||||||||||| ||||||||||| |  ||||||||||||||||    
T  41665942 cctatatctaagctcccatttgactttatttttgtccctaaatgtaaactctctttcaaattactagat 41665874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 254
Target Start/End: Complemental strand, 31900681 - 31900650
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaaca 254  Q
    ||||||||||||||||||||||||||||||||    
T  31900681 tttgattttatttttgtccttaaatgtaaaca 31900650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 273
Target Start/End: Original strand, 9718061 - 9718111
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||||||   |||||||||||||| |||||||||| |||||    
T  9718061 tttgattttatttttgtttctaaatgtaaacaccctttcaaattattagat 9718111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 253
Target Start/End: Complemental strand, 24129029 - 24128999
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaac 253  Q
    |||||||||||||||||||||||||||||||    
T  24129029 tttgattttatttttgtccttaaatgtaaac 24128999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 43650258 - 43650212
Alignment:
Q  207 tatatctaagcatcagtttgattttatttttgtccttaaatgtaaac 253  Q
    ||||||||| ||||  ||||||||||||||||| |||||||||||||    
T  43650258 tatatctaaacatccatttgattttatttttgttcttaaatgtaaac 43650212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 3326953 - 3326892
Alignment:
Q  213 taagcatcagtttgattttatttttgtcc-ttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||| |||||| ||||||||||||| |||||||||||    |||||||||||||||||    
T  3326953 taagcatccgtttgactttatttttgtccattaaatgtaaatctattttcaaattactagat 3326892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 211; Significance: 1e-115; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 338 - 760
Target Start/End: Complemental strand, 25874817 - 25874379
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    |||||||||||||||||||||||| |||||| |||| |||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  25874817 cataatattcatacattacaataacaacaaagatcaatgactcaataaaaacataaataatgtcacttacatttaataaaaataaagttctttgatttaa 25874718  T
Q  438 ---------------agctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactga 522  Q
                   | |||||||||||||| | ||||||| || |||||| |||| ||||||||||||| |||||||||||||| ||||||||||||||    
T  25874717 caaaaacataagtaaaactcatcatattcaaaa-aaacaaagctcttgctttaacattcccaaccactttcacttccttttaaaggagcgtaataactga 25874619  T
Q  523 taacactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcag 622  Q
    |||||||||||||| ||||| |||||||||  |||| |||||| ||||||||||||||||||||| || ||||||||||| | ||| ||||||||||| |    
T  25874618 taacactcacaatatctagggtgttttcttcggaagttgaatgatattgaggttatttatgtaatatattcggtttaataacgggtatggatatccgcgg 25874519  T
Q  623 ctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattt--tattcatggatatccattaagatatctgctc 720  Q
     ||||||||||||||||||| ||||| ||| ||||||||| | | ||||||||||||||||||||||  ||| ||||||||||||||||| |||| ||||    
T  25874518 gtgtggataccattaaatccgcatccgtatccattaattagcgggtagttaaaaaatccgtttattttatatccatggatatccattaaggtatccgctc 25874419  T
Q  721 cgttcccgtgatggattttatccgtggatatccacgggtg 760  Q
    ||| | ||||| |||||||||||| |||||||||||||||    
T  25874418 cgtgctcgtgacggattttatccgcggatatccacgggtg 25874379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 338 - 754
Target Start/End: Original strand, 21288113 - 21288538
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    |||||||||||||||||||| ||| || ||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  21288113 cataatattcatacattacactaacaataaagatcattgactcaacaaaaacataaataaagtctcttacatttaattaaaataaagttctttgatttaa 21288212  T
Q  438 --------------agctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactgat 523  Q
                  |  ||||||||||||||| |||||||      ||||||||||| ||||||||||| | ||||||| |||| | |||||||||||||    
T  21288213 caaaatcataagtaaaatcatcatattcaacaaaaacaaa------gcttcaacaattccaaccactttcatttcctttaaaaggatcgtaataactgat 21288306  T
Q  524 aacactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagc 623  Q
    ||||||||||||||||||| |||||||| | |||| |||||| |||||| ||||||||||||||||||| ||||||||||| ||| ||||||||||| |     
T  21288307 aacactcacaatacctagggtgttttctcaggaagttgaatgatattgaagttatttatgtaatttacttggtttaatagcgggtatggatatccgcggg 21288406  T
Q  624 tgtggataccattaaatccacatccatattcattaattaacagatagtt-aaaaaatccgtttattttattcatggatatccattaagatatctgctccg 722  Q
    ||||||||||||||||||| ||||| ||| ||||||||| | | ||||| |||||||||||||||||||| ||| |||||||||||||||||| ||||||    
T  21288407 tgtggataccattaaatccgcatccctatccattaattagcgggtagttaaaaaaatccgtttattttatccatagatatccattaagatatccgctccg 21288506  T
Q  723 ttcccgtgatggattttatccgtggatatcca 754  Q
    | ||||||| | |||||||||| | |||||||    
T  21288507 tgcccgtgacgtattttatccgcgaatatcca 21288538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 338 - 760
Target Start/End: Original strand, 5295224 - 5295664
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  5295224 cataatattcatacattacaataacaacaaagatcattgactcaacaaaaacataaataaagtcccttacatttaattaaaataaagttatttgatttaa 5295323  T
Q  438 ---------------agctcatcatattcaacataaacaaaacttttgcttc-aacaatcccaaccacttttacttccttttaaagtagcgtaataactg 521  Q
                   |||||||||||||||||| ||||||| |  ||||||| ||||||| |||||||||| || ||||||||||| ||||||||||| |    
T  5295324 caaaaacataactaaagctcatcatattcaacaaaaacaaagcacttgcttccaacaatctcaaccactttcacatccttttaaaggagcgtaataaccg 5295423  T
Q  522 ataacactcacaatacctagg----ctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatc 617  Q
    |||||||||| |||| || ||     |||||||||| |||| | |||| ||||||| ||||||||||||||||||| |||||||||| | | ||||||||    
T  5295424 ataacactcataatatctggggtgtttgttttcttaggaagtttaatgatattgagattatttatgtaatttactcagtttaatagcggatatggatatc 5295523  T
Q  618 cgcagctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctg 717  Q
    ||||| ||| ||||||||||||||  ||||  ||| |||||||||   | |||||||||||| |||||||||||||||||||||||||||||| |||| |    
T  5295524 cgcaggtgtagataccattaaatctgcatctgtatccattaattagtgggtagttaaaaaatacgtttattttattcatggatatccattaaggtatccg 5295623  T
Q  718 ctccgttcccgtgatggattttatccgtggatatccacgggtg 760  Q
    |||||| |||||| | ||||||||||  | |||||||||||||    
T  5295624 ctccgtgcccgtggtagattttatcc--gaatatccacgggtg 5295664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 338 - 755
Target Start/End: Complemental strand, 27926735 - 27926316
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||| ||||||||          |||||||||||||||||    
T  27926735 cataatattcatacattacaataacaacaaagatcattgactcaacaaaa-cataaataaagtctcttacatt----------aaagttctttgatttaa 27926647  T
Q  438 ---------------agctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactga 522  Q
                   | ||||| |||||||||| ||||||| || || ||||||||||||||||| |||| ||||| |||||||| |  ||||||||| |    
T  27926646 caaaaacataggtaaaactcattatattcaacaaaaacaaagctcttacttcaacaatcccaacctctttcacttcattttaaaggaatgtaataactaa 27926547  T
Q  523 taacactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcag 622  Q
    |||||||||||||||||||| |  ||||||| |||| ||||||||||||||||||||||  ||||||| |||||||||||||   | | ||||||||||     
T  27926546 taacactcacaatacctaggtt--tttcttaggaagttgaatggtattgaggttatttacataatttattcggtttaatagcgcatatagatatccgcat 27926449  T
Q  623 ctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccg 722  Q
     ||||||||||||||||||| ||||| ||| ||||||||| | | |||||||||||||  |||||||||| ||||||||||||||||| |||| ||||||    
T  27926448 gtgtggataccattaaatccgcatccgtatccattaattagcgggtagttaaaaaatctatttattttatccatggatatccattaaggtatccgctccg 27926349  T
Q  723 ttcccgtgatggattttatccgtggatatccac 755  Q
    |  |||||  |||||||||||| ||||||||||    
T  27926348 tgtccgtggcggattttatccgcggatatccac 27926316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 516 - 742
Target Start/End: Original strand, 13826260 - 13826486
Alignment:
Q  516 taactgataacactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggata 615  Q
    ||||| ||||||||||||||||||||| |||||||||| |||| |||||| ||||||||||||| |||||||||||||||||||||||| ||| ||||||    
T  13826260 taactaataacactcacaatacctagggtgttttcttaggaagttgaatgatattgaggttattaatgtaatttactcggtttaatagcgggtatggata 13826359  T
Q  616 tccgcagctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatc 715  Q
    ||||| | ||||||||||||||||||   |||||||| ||||||||| |   ||||||||||||||||||||||||| |||||||||| |||||  ||||    
T  13826360 tccgcgggtgtggataccattaaatctgtatccatatccattaattagcgagtagttaaaaaatccgtttattttatccatggatatctattaatgtatc 13826459  T
Q  716 tgctccgttcccgtgatggattttatc 742  Q
    |||||||| ||||||  ||||||||||    
T  13826460 tgctccgtgcccgtggcggattttatc 13826486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 530 - 753
Target Start/End: Complemental strand, 3778884 - 3778662
Alignment:
Q  530 cacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtgga 629  Q
    |||||||| |||| | |||||||| |||| |||||| |||| |||||||||||||||||||||| |||||||||  ||| || |||||||| | | ||||    
T  3778884 cacaatacttagggttttttcttaggaagttgaatgatattaaggttatttatgtaatttactctgtttaatagt-ggtatgaatatccgcgggtatgga 3778786  T
Q  630 taccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgt 729  Q
    |||| |||||||| ||||  ||| ||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||| |||||    
T  3778785 taccgttaaatccgcatctgtatccattaattagcggatagttaaaaaatctgtttattttattcatggatatccattaaggtatccgctccgtgcccgt 3778686  T
Q  730 gatggattttatccgtggatatcc 753  Q
    |  |||||||||||| ||||||||    
T  3778685 ggcggattttatccgcggatatcc 3778662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 3779021 - 3778921
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  3779021 cataatattcatacactacaataataacaaagatcattgactcaacaaaaacataaataaagtcccttatatttaataaaaataaagttatttgatttaa 3778922  T
Q  438 a 438  Q
    |    
T  3778921 a 3778921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 555 - 757
Target Start/End: Original strand, 12149232 - 12149434
Alignment:
Q  555 gaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattc 654  Q
    |||| |||| || ||| ||| |||||| |||||| |||| |||||||| | |||| |||||||||| | || |||||||||||||||  ||||| ||| |    
T  12149232 gaagttgaaaggcattaaggatatttacgtaattcactcagtttaataacgggtgcggatatccgcgggtgcggataccattaaatcagcatccgtatcc 12149331  T
Q  655 attaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgtgatggattttatccgtggatatcca 754  Q
    |||||||||| | ||||||||| |||| |||||||||| | ||||||||||||||| |||| |||||||  |||||  |||||||||||| |||||||||    
T  12149332 attaattaacgggtagttaaaatatccatttattttatccgtggatatccattaaggtatccgctccgtgtccgtggcggattttatccgcggatatcca 12149431  T
Q  755 cgg 757  Q
    |||    
T  12149432 cgg 12149434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 562 - 751
Target Start/End: Complemental strand, 48251363 - 48251174
Alignment:
Q  562 aatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattcattaatt 661  Q
    ||||||||| ||||||||||| ||||||||||||||||||||| | | ||||||| ||| | |  ||||||||||||||||  |||   || ||||||||    
T  48251363 aatggtattaaggttatttatctaatttactcggtttaatagcggatatggatatacgcgggtagggataccattaaatccgtatctgcatccattaatt 48251264  T
Q  662 aacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgtgatggattttatccgtggatat 751  Q
    | ||| || |||||| |||| |||||||||| ||| ||||||||||||  ||||||||||||  ||||||  ||||||||||| ||||||    
T  48251263 agcagttaattaaaatatccatttattttatccatagatatccattaaagtatctgctccgtatccgtgacagattttatccgcggatat 48251174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 338 - 437
Target Start/End: Original strand, 13825924 - 13826023
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    |||||||||||||||||||||||| |||||| |||| ||||| |||||||| |||||||| ||| |||||||| ||||||||||||||||||| ||||||    
T  13825924 cataatattcatacattacaataacaacaaagatcactgacttaacaaaaatataaataatgtcacttacattaaataaaaataaagttctttaatttaa 13826023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 574 - 709
Target Start/End: Complemental strand, 27520000 - 27519865
Alignment:
Q  574 gttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattcattaattaacagatagtta 673  Q
    |||||||||||| ||||||   ||||||| | ||   |||||||||| | || |||| |||| |||||||||||||||| ||| || |||||| ||||||    
T  27520000 gttatttatgtattttacttaatttaataacgggcacggatatccgcggatgcggatcccatgaaatccacatccatatccataaaataacagctagtta 27519901  T
Q  674 aaaaatccgtttattttattcatggatatccattaa 709  Q
    ||| || |||||||||||| ||||||| ||||||||    
T  27519900 aaatattcgtttattttatccatggatgtccattaa 27519865  T

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Target: chr3; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 338 - 409
Target Start/End: Complemental strand, 48251779 - 48251708
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacat 409  Q
    |||||||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||| ||| ||||    
T  48251779 cataatatccatacattacaataacaacaaagatcattgattcaacaaaaacataaataaagttcctcacat 48251708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 223 - 273
Target Start/End: Original strand, 12077632 - 12077682
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12077632 tttgattttatttttgtccttaaatgtaaaccccttttcaaattactagat 12077682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 20945173 - 20945241
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||| |  ||||| ||||||||||||| ||||||||||| |||||||||||||||||||    
T  20945173 cctatatctaagcacccatttgactttatttttgtccctaaatgtaaaccccttttcaaattactagat 20945241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 44083860 - 44083792
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||||  ||||| ||||||||||||| ||||||||||| | |||||||||||||||||    
T  44083860 cctatatctaagcatccatttgactttatttttgtccctaaatgtaaacccattttcaaattactagat 44083792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 29645568 - 29645489
Alignment:
Q  195 ctccctccatcct-atatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||| |||| ||||||||||||   ||||||||||||||||||| |||||||||||  ||||||||||||||||||    
T  29645568 ctccctccgtccttatatctaagcatttatttgattttatttttgtccctaaatgtaaaccacttttcaaattactagat 29645489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 339 - 400
Target Start/End: Original strand, 36584415 - 36584476
Alignment:
Q  339 ataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagt 400  Q
    ||||||||||||||||| ||||| |||||| |||||||| |||| |||||||||||||||||    
T  36584415 ataatattcatacattataataacaacaaagatcattgattcaagaaaaacataaataaagt 36584476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 46048756 - 46048688
Alignment:
Q  205 cctatatctaagca-tcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||| ||| ||||||||||||||||||| ||||||||||| ||||||||||||| |||||    
T  46048756 cctatatctaagcactca-tttgattttatttttgtccctaaatgtaaaccccttttcaaattaatagat 46048688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 11345553 - 11345485
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||| |  |||||||||||||||| || ||||| ||||| |||||||||||||||||||    
T  11345553 cctatatctaagcacccatttgattttatttttgcccctaaatttaaaccccttttcaaattactagat 11345485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 13084233 - 13084301
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||| ||||   |||||||||||||| |||||||| |||||| |||||||||||||||||||    
T  13084233 cctatatctaaacatccaattgattttatttttatccttaaacgtaaactccttttcaaattactagat 13084301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 357 - 420
Target Start/End: Complemental strand, 13084795 - 13084732
Alignment:
Q  357 aataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaat 420  Q
    ||||| |||||| |||| |||||||||||||||||||||||| | | |||||||||||||||||    
T  13084795 aataacaacaaagatcaatgactcaacaaaaacataaataaaattctttacatttaataaaaat 13084732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 26517077 - 26517156
Alignment:
Q  195 ctccctccatcc-tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||| ||| |||||||||||| |  ||||||||||||||||||| ||||||||||| | ||| |||||||||||||    
T  26517077 ctccctccgtccatatatctaagcacccatttgattttatttttgtccctaaatgtaaactcttttacaaattactagat 26517156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 206 - 273
Target Start/End: Complemental strand, 26999275 - 26999208
Alignment:
Q  206 ctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||| ||||  |||||||||||||||||||| |||||||||| |||||| |||||| |||||    
T  26999275 ctatatctaaacatccatttgattttatttttgtcctcaaatgtaaacccctttttaaattattagat 26999208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 435 - 513
Target Start/End: Complemental strand, 48251515 - 48251435
Alignment:
Q  435 taaagctcatcatattcaacataaacaaaacttt--tgcttcaacaatcccaaccacttttacttccttttaaagtagcgt 513  Q
    ||||||||||||||||||||| |||||||  |||  ||||||||||||||| |||||||| ||| ||||||| || |||||    
T  48251515 taaagctcatcatattcaacaaaaacaaatttttcatgcttcaacaatcccgaccactttcactcccttttagaggagcgt 48251435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 338 - 434
Target Start/End: Original strand, 12149034 - 12149130
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatt 434  Q
    ||||||||  ||| |||| || || |||||| ||||||||||||| ||||||||||||||||| |  ||||||||| | ||||||| ||| ||||||    
T  12149034 cataatatcgatagattataacaacaacaaagatcattgactcaataaaaacataaataaagttcactacatttaacagaaataaaattcattgatt 12149130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 28477617 - 28477549
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||| ||  ||||| |||||||||| || |||||||||||  ||||||||||||||||||    
T  28477617 cctatatctaagcctccatttgactttatttttgcccctaaatgtaaacctcttttcaaattactagat 28477549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 31531001 - 31531068
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||| |  ||||| |||||||| |||| ||||||||||| |||||||||||||||||||    
T  31531001 cctatatctaagcacccatttgactttatttt-gtccctaaatgtaaactccttttcaaattactagat 31531068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 43186974 - 43187042
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||| ||| ||||  |||||||||| |||||||||||||| ||||| ||||||||| |||||||||    
T  43186974 cctatatgtaaacatccatttgattttacttttgtccttaaatataaaccccttttcaatttactagat 43187042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 207 - 270
Target Start/End: Original strand, 14645764 - 14645827
Alignment:
Q  207 tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattacta 270  Q
    |||||||||||| |  ||||| ||||||||||| ||||||||||||| |||||| |||||||||    
T  14645764 tatatctaagcacccatttgactttatttttgttcttaaatgtaaacccctttttaaattacta 14645827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 379 - 434
Target Start/End: Original strand, 32847582 - 32847637
Alignment:
Q  379 tcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatt 434  Q
    |||||||||||||||||||||| | | |||||||| ||||| ||||||||||||||    
T  32847582 tcaacaaaaacataaataaagttcataacatttaacaaaaacaaagttctttgatt 32847637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 583 - 662
Target Start/End: Original strand, 36585000 - 36585079
Alignment:
Q  583 gtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattcattaatta 662  Q
    |||||||| ||||||||||||| ||| ||||||||||| | || |||||||||| ||||  ||||| ||| |||||||||    
T  36585000 gtaatttattcggtttaatagcgggtatggatatccgcgggtgcggataccatttaatctgcatccgtatccattaatta 36585079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 233 - 275
Target Start/End: Complemental strand, 25750723 - 25750681
Alignment:
Q  233 tttttgtccttaaatgtaaacaccttttcaaattactagatac 275  Q
    ||||||||||||||||||||| | |||||||||||||||||||    
T  25750723 tttttgtccttaaatgtaaactctttttcaaattactagatac 25750681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 205 - 270
Target Start/End: Original strand, 29676614 - 29676679
Alignment:
Q  205 cctatatctaagca-tcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattacta 270  Q
    |||||||||||||| ||| ||||||||||||||||||| |||||||||||  | |||||||||||||    
T  29676614 cctatatctaagcactca-tttgattttatttttgtccctaaatgtaaacctcatttcaaattacta 29676679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 205 - 275
Target Start/End: Original strand, 33411849 - 33411919
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagatac 275  Q
    |||||||||||| |||  ||||||||||||||| | ||||||||||||  | ||||||||||| |||||||    
T  33411849 cctatatctaagtatccatttgattttatttttattcttaaatgtaaattcattttcaaattattagatac 33411919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 223 - 273
Target Start/End: Complemental strand, 42891633 - 42891583
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||| ||||||||||||| ||||||||||| ||| |||||||||||||||    
T  42891633 tttgactttatttttgtccctaaatgtaaacccctcttcaaattactagat 42891583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 50524851 - 50524917
Alignment:
Q  207 tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||| |  ||||| ||||||||||||||||||| ||||| | |||||||||||| ||||    
T  50524851 tatatctaagcacccatttgactttatttttgtccttaaatctaaaccctttttcaaattacaagat 50524917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 272
Target Start/End: Complemental strand, 26043247 - 26043183
Alignment:
Q  207 tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactaga 272  Q
    |||||||||||| |  ||||| |||||||| |||| ||||||||||| ||||||||||||||||||    
T  26043247 tatatctaagcacccatttgactttatttt-gtccctaaatgtaaactccttttcaaattactaga 26043183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 339 - 400
Target Start/End: Original strand, 26187939 - 26188000
Alignment:
Q  339 ataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagt 400  Q
    |||||||||||||||| |||||| || ||| ||||||  |||||||||||||||| ||||||    
T  26187939 ataatattcatacattgcaataacaataaagatcattacctcaacaaaaacataattaaagt 26188000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 31819639 - 31819571
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||| |  ||||||||||||||||||| ||||| ||| |   |||||||||||||||||    
T  31819639 cctatatctaagcacctatttgattttatttttgtccctaaatataacccaattttcaaattactagat 31819571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 35145464 - 35145397
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||| |||||| |  ||||||||||||||||||| ||||| |||||  ||||||||||||||||||    
T  35145464 cctatatataagcaaccatttgattttatttttgtccctaaatataaac-tcttttcaaattactagat 35145397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 435 - 506
Target Start/End: Original strand, 36584501 - 36584573
Alignment:
Q  435 taaagctcatcatattcaacataaacaaaactt-ttgcttcaacaatcccaaccacttttacttccttttaaa 506  Q
    ||||| ||||||||||||||| |||||||  || ||||||||| |||||| |||||||| ||| |||||||||    
T  36584501 taaagttcatcatattcaacaaaaacaaagtttattgcttcaagaatcccgaccactttcactaccttttaaa 36584573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 44698412 - 44698464
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagatac 275  Q
    ||||| |||||||||||||||| |||||||| | |||||||||||| ||||||    
T  44698412 tttgactttatttttgtccttagatgtaaacccattttcaaattacaagatac 44698464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 273
Target Start/End: Complemental strand, 3475682 - 3475615
Alignment:
Q  206 ctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||| |  ||||||||||||||||||| ||||| |||||  ||||| || |||||||||    
T  3475682 ctatatctaagcacccatttgattttatttttgtccctaaatataaacctctttttaacttactagat 3475615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 254
Target Start/End: Original strand, 10259041 - 10259072
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaaca 254  Q
    ||||||||||||||||||||||||||||||||    
T  10259041 tttgattttatttttgtccttaaatgtaaaca 10259072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 34055740 - 34055807
Alignment:
Q  207 tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagata 274  Q
    |||||||||||| |  ||||||||||||||| ||  |||||||| || |||||| |||||||||||||    
T  34055740 tatatctaagcacctatttgattttatttttttctctaaatgtatacccctttttaaattactagata 34055807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 254
Target Start/End: Complemental strand, 39850971 - 39850940
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaaca 254  Q
    ||||||||||||||||||||||||||||||||    
T  39850971 tttgattttatttttgtccttaaatgtaaaca 39850940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 41727129 - 41727176
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattacta 270  Q
    |||||||||| |||||| ||||||||||||| |||||| |||||||||    
T  41727129 tttgattttacttttgttcttaaatgtaaacccctttttaaattacta 41727176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 273
Target Start/End: Complemental strand, 11140911 - 11140861
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||| ||| | |||||||||  ||||||||||||||||||    
T  11140911 tttgattttatttttatccctgaatgtaaacctcttttcaaattactagat 11140861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 11388326 - 11388288
Alignment:
Q  235 tttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  11388326 tttgtccttaaatgtaaaccctttttcaaattactagat 11388288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 253
Target Start/End: Original strand, 11676087 - 11676117
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaac 253  Q
    |||||||||||||||||||||||||||||||    
T  11676087 tttgattttatttttgtccttaaatgtaaac 11676117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 441 - 491
Target Start/End: Original strand, 13826042 - 13826092
Alignment:
Q  441 tcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccactt 491  Q
    ||||||||||||||| ||||||| || ||||||||||| ||||| ||||||    
T  13826042 tcatcatattcaacaaaaacaaagctcttgcttcaacattcccagccactt 13826092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 253
Target Start/End: Original strand, 23241689 - 23241719
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaac 253  Q
    |||||||||||||||||||||||||||||||    
T  23241689 tttgattttatttttgtccttaaatgtaaac 23241719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 273
Target Start/End: Complemental strand, 29349593 - 29349543
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||| ||||||||||| | ||||||||||| | |||||||||||||||||    
T  29349593 tttgactttatttttgttcctaaatgtaaactcattttcaaattactagat 29349543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 253
Target Start/End: Original strand, 30464913 - 30464943
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaac 253  Q
    |||||||||||||||||||||||||||||||    
T  30464913 tttgattttatttttgtccttaaatgtaaac 30464943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 253
Target Start/End: Complemental strand, 33635159 - 33635129
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaac 253  Q
    |||||||||||||||||||||||||||||||    
T  33635159 tttgattttatttttgtccttaaatgtaaac 33635129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 253
Target Start/End: Original strand, 33987064 - 33987094
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaac 253  Q
    |||||||||||||||||||||||||||||||    
T  33987064 tttgattttatttttgtccttaaatgtaaac 33987094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 253
Target Start/End: Original strand, 37599713 - 37599743
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaac 253  Q
    |||||||||||||||||||||||||||||||    
T  37599713 tttgattttatttttgtccttaaatgtaaac 37599743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 53716843 - 53716909
Alignment:
Q  207 tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||| ||  ||| | ||||||||||||||||||||||||  || |||||| |||||||||    
T  53716843 tatatctaagcctccatttaactttatttttgtccttaaatgtaaatcccctttcaatttactagat 53716909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 253
Target Start/End: Original strand, 55257929 - 55257959
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaac 253  Q
    |||||||||||||||||||||||||||||||    
T  55257929 tttgattttatttttgtccttaaatgtaaac 55257959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 209; Significance: 1e-114; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 346 - 760
Target Start/End: Complemental strand, 48379191 - 48378761
Alignment:
Q  346 tcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa-------- 437  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||            
T  48379191 tcatacattacaataacaacaaagatcattgactcaacaaaaacataaataaagtctcttacatttaataaaaataaagttctttgatttaacaaaaaca 48379092  T
Q  438 ------agctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactgataacactca 531  Q
          |   ||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||    
T  48379091 taagtaaaaccatcatattcaacataagcaaaacttttgcttcaacaatcccaaccactttcatttccttttaaaggagcgtaataactgataacactca 48378992  T
Q  532 caatac--ctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtgga 629  Q
    |||||   ||||| |||||||||| |||| |||||| ||||||||||||| |||||| |||||| |||||||||  ||| ||||| ||||| |  ||| |    
T  48378991 caatatatctagggtgttttcttaggaagttgaatgatattgaggttattgatgtaacttactcagtttaatagagggtatggatgtccgcgggcgtgaa 48378892  T
Q  630 taccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgt 729  Q
    || |||||||||| |||   ||| ||||||||| | | ||||||||||||||||||||||||| ||||||||| ||||||| |||| ||||||| |||||    
T  48378891 tatcattaaatccgcatatgtatccattaattagcgggtagttaaaaaatccgtttattttatccatggatattcattaagctatccgctccgtgcccgt 48378792  T
Q  730 gatggattttatccgtggatatccacgggtg 760  Q
    ||||||||||||||| |||||||||||||||    
T  48378791 gatggattttatccgcggatatccacgggtg 48378761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 182; E-Value: 6e-98
Query Start/End: Original strand, 338 - 760
Target Start/End: Original strand, 11894306 - 11894712
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    |||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||    
T  11894306 cataatattcatacattataataacaacaaagatcattgactcaacaaaaacataaataaagttgcttacatttaataaaaataaagttatttgatttaa 11894405  T
Q  438 agctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactgataacactcacaatac 537  Q
                    || ||||||| || |||| |||||||||||||||||||| |||||||||||||  || ||||||||  ||||||||||||||||    
T  11894406 ----------------caaaaacaaagctcttgcatcaacaatcccaaccactttcacttccttttaaaagagtgtaataacaaataacactcacaatac 11894489  T
Q  538 ctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccatta 637  Q
     || | | |||| ||| |||| |||||| |||| ||||||||||||||||||||||||||||||||  ||| ||||||||| | | |||||||||| |||    
T  11894490 ataaggtttttttttaggaagttgaatgatattaaggttatttatgtaatttactcggtttaatagtcggtatggatatccacgggtgtggataccgtta 11894589  T
Q  638 aatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgtgatggatt 737  Q
    ||||| ||||||||| ||||||||| ||| |||||||||||| | |||||||||| ||| ||||||||||||| |||| ||||||| ||||||| |||||    
T  11894590 aatccgcatccatatccattaattagcaggtagttaaaaaattcatttattttatccattgatatccattaaggtatccgctccgtgcccgtgacggatt 11894689  T
Q  738 ttatccgtggatatccacgggtg 760  Q
     |||||| |||||| ||||||||    
T  11894690 atatccgcggatattcacgggtg 11894712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 338 - 749
Target Start/End: Original strand, 47140802 - 47141228
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    |||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  47140802 cataatatacatacattacaacaacaacaaaaatcattgactcaacaaaaacataaataaagtctcttacatttaataaaaataaagttctttgatttaa 47140901  T
Q  438 ---------------agctc-atcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactg 521  Q
                   | ||| ||||||||||||| |||||||  | |||  |||||||||||||| | ||| ||||||| |||||  ||||||||||||     
T  47140902 caaaagcataagtaaaactccatcatattcaacaaaaacaaagttcttgggtcaacaatcccaactattttcacttcctattaaaagagcgtaataacta 47141001  T
Q  522 ataacactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgca 621  Q
    ||||||||||||||||  ||| | |||||||| |||| ||||||||||| || |||||||| ||||||||||| ||||||||| ||| |||||||||||     
T  47141002 ataacactcacaatacg-agggttttttcttaggaagttgaatggtattaagattatttatttaatttactcgatttaatagcgggtatggatatccgcg 47141100  T
Q  622 gctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctcc 721  Q
    | ||  |||||||||||||    || | ||| ||||||||||| | |||| |||||||||| ||||||||| ||||||||||||||||| |||| |||||    
T  47141101 ggtgctgataccattaaatatgtattcctatccattaattaacgggtagtaaaaaaatccgcttattttatccatggatatccattaaggtatccgctcc 47141200  T
Q  722 gttcccgtgatggattttatccgtggat 749  Q
    ||  |||||  |||||||||||| ||||    
T  47141201 gtgtccgtggcggattttatccgcggat 47141228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 338 - 764
Target Start/End: Complemental strand, 31585342 - 31584911
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgattt-- 435  Q
    |||||||| ||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||  || |||||||||||||||||| ||| ||||      
T  31585342 cataatatacatacattacaataacaacaaagatcattgacccaacaaaaacataaataaagtccccgacgtttaataaaaataaagttatttaatttaa 31585243  T
Q  436 -------------aaagctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactga 522  Q
                 |||||||||||||||||||| ||||||| ||               |||  |||||| |||||||||||||| ||| |||||||| |    
T  31585242 caaaaacataagtaaagctcatcatattcaacaaaaacaaagct---------------ccattcactttcacttccttttaaaggagcataataactaa 31585158  T
Q  523 taacactcacaatacc-----taggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatc 617  Q
    ||| |||||||||||      |||  | ||||| || |||| |||||| |||||| ||||||||||||||||| ||||||||||||| ||| ||||||||    
T  31585157 taatactcacaatacaatacatagagttttttcctaggaagttgaatgatattgatgttatttatgtaatttaatcggtttaatagcgggtatggatatc 31585058  T
Q  618 cgcagctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctg 717  Q
    ||| | |||||||| |||||||||| ||||| ||| ||||||||| | | ||||||||||| || |||||||||| ||||||||||||||||| |||| |    
T  31585057 cgcgggtgtggatatcattaaatccgcatccgtatccattaattagcgggtagttaaaaaacccatttattttatccatggatatccattaaggtatccg 31584958  T
Q  718 ctccgttcccgtgatggattttatccgtggatatccacgggtgtgga 764  Q
     |||||  || ||  |||||||||| | |||||||||||||||||||    
T  31584957 ttccgtgtccatggcggattttatctgcggatatccacgggtgtgga 31584911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 338 - 757
Target Start/End: Original strand, 25987404 - 25987797
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaata-aagttctttgattta 436  Q
    |||||||||||||||||| ||||| || ||| |||||| |||||||||||||||||||||||| | ||| || ||| ||||| | ||||          |    
T  25987404 cataatattcatacattaaaataacaaaaaagatcattaactcaacaaaaacataaataaagttc-ttagatataacaaaaacataagt----------a 25987492  T
Q  437 aagctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactgataacactcacaata 536  Q
    |||||| |||||||||||| ||||||| || |||||||| |||||||||||| ||| | || ||||||||  ||||||||||||||||||||||||||||    
T  25987493 aagctcgtcatattcaacaaaaacaaagctcttgcttcatcaatcccaaccattttcattttcttttaaaagagcgtaataactgataacactcacaata 25987592  T
Q  537 cctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccatt 636  Q
     ||||| ||||||||||  | | |||||| |||||||| ||||||||||||||| ||||||||||||| ||                |||||||||||||    
T  25987593 tctagggtgttttcttagaatgttgaatgatattgaggatatttatgtaatttaatcggtttaatagcggg----------------tgtggataccatt 25987676  T
Q  637 aaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgtgatggat 736  Q
    ||||||||||   ||| ||||||||| | | |||||||||||| | |||||||||| ||| ||||||||||||| |||||||| ||| || |||| ||||    
T  25987677 aaatccacatttgtatccattaattagcgggtagttaaaaaattcatttattttatccatagatatccattaaggtatctgcttcgtgcctgtgacggat 25987776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 338 - 502
Target Start/End: Complemental strand, 29678428 - 29678249
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatt--- 434  Q
    |||| ||||||||||||||||||| |||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||       
T  29678428 catattattcatacattacaataacaacaaagatcattgactcaacaaaatcataaataaattcccttacatttaataaaaataaagttctttgatttaa 29678329  T
Q  435 ------------taaagctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttt 502  Q
                ||||||||||||||||||||| |||||| ||| ||||||||||||||| ||||||||| |||||||||    
T  29678328 caaaagtataagtaaagctcatcatattcaacaaaaacaagactcttgcttcaacaatcctaaccactttcacttccttt 29678249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 555 - 757
Target Start/End: Complemental strand, 25293932 - 25293730
Alignment:
Q  555 gaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattc 654  Q
    |||| |||| || ||| ||| |||||| |||||| |||| ||||||||||||||| |||||||||| | || |||||||||||||||| ||||| ||| |    
T  25293932 gaagttgaaaggcattaaggatatttacgtaattcactcagtttaatagcaggtgcggatatccgcgggtgcggataccattaaatccgcatccgtatcc 25293833  T
Q  655 attaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgtgatggattttatccgtggatatcca 754  Q
    |||||||| | | ||||||||| |||| ||||||||||   ||||||||||||||| |||| |||||||  |||||  |||||||||||| |||||||||    
T  25293832 attaattagcgggtagttaaaatatccatttattttatctgtggatatccattaaggtatccgctccgtgtccgtggcggattttatccgcggatatcca 25293733  T
Q  755 cgg 757  Q
    |||    
T  25293732 cgg 25293730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 546 - 760
Target Start/End: Complemental strand, 29677496 - 29677287
Alignment:
Q  546 ttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccaca 645  Q
    ||||||||||||| |||||| |||| | ||||||||||||||||||  ||||||||||| ||     |||||||| | ||||||||||||||||||| ||    
T  29677496 ttttcttaagaagttgaatgatattaaagttatttatgtaatttacctggtttaatagcggg-----atatccgcgggtgtggataccattaaatccgca 29677402  T
Q  646 tccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgtgatggattttatccgt 745  Q
    ||| ||| ||||||||  | | |||||||||||||| |||||||||| ||||||||||||||||| |||| |||||||  ||||    |||||||||||     
T  29677401 tccgtatccattaatttgcgggtagttaaaaaatccatttattttatccatggatatccattaaggtatcagctccgtgtccgttgcagattttatccgc 29677302  T
Q  746 ggatatccacgggtg 760  Q
    ||||||||| |||||    
T  29677301 ggatatccaagggtg 29677287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 338 - 501
Target Start/End: Complemental strand, 36728862 - 36728684
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatt--- 434  Q
    |||||||| || |||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||       
T  36728862 cataatatccacacattacaataacaacaaagatcattgactcaacaaaaacataaataaagtctcttacatttaagaaaaataaagttatttgatttaa 36728763  T
Q  435 ------------taaagctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttcctt 501  Q
                ||||| ||||||||||||||| ||||||| || ||||||||||||||||||||||||| ||||||||    
T  36728762 caaaaacacatgtaaagttcatcatattcaacaaaaacaaagctcttgcttcaacaatcccaaccactttcacttcctt 36728684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 566 - 709
Target Start/End: Complemental strand, 2191661 - 2191518
Alignment:
Q  566 gtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattcattaattaaca 665  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| |||||||| || | || |||||||||||||||  ||||  ||| ||||||||||||    
T  2191661 gtattaaggttatttatgtaatttattcggtttaatagcaggtatggatatctgcgggtgcggataccattaaatctgcatctgtatccattaattaaca 2191562  T
Q  666 gatagttaaaaaatccgtttattttattcatggatatccattaa 709  Q
    | ||| ||||| ||||||||||||||| ||||||||||||||||    
T  2191561 ggtagataaaatatccgtttattttatccatggatatccattaa 2191518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 338 - 435
Target Start/End: Complemental strand, 19884519 - 19884422
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgattt 435  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| | |||||| ||||||| ||||||  |||||||||||    
T  19884519 cataatattcatacattacaataataacaaagatcattgactcaacaaaaatataaataaaattccttacttttaatacaaataatattctttgattt 19884422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 338 - 437
Target Start/End: Complemental strand, 17562895 - 17562796
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    |||||||| ||||||||||||||| |||||| ||||||||| ||||||||||| ||||||||||||  || |||||||||||||||||| ||||||||||    
T  17562895 cataatatacatacattacaataacaacaaagatcattgacccaacaaaaacagaaataaagtccccgacgtttaataaaaataaagttatttgatttaa 17562796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 338 - 437
Target Start/End: Complemental strand, 31292866 - 31292770
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    ||||||||||||||||||   |||||||||  |||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||    
T  31292866 cataatattcatacatta---taataacaacgatcattgactcagcaaaaacataaataaagtcccttacatgtaacaaaaataaagttatttgatttaa 31292770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 513 - 744
Target Start/End: Original strand, 15378941 - 15379178
Alignment:
Q  513 taataactgataacactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtgg 612  Q
    |||||||| |||||| ||||||| || | | | |||  ||| |||| |||| |||||| ||||||||||||||||||||||  ||||||||| ||| |||    
T  15378941 taataactaataacaatcacaatgccgaagatttttgtttaggaagttgaaaggtattaaggttatttatgtaatttactcaatttaatagcgggtatgg 15379040  T
Q  613 atatccgcagctgtggataccattaa------atccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccat 706  Q
    ||||| || | ||||||||| |||||      ||||  |||| ||| ||||||||| | |  |||||||| |||||||||||| || |||||||||||||    
T  15379041 atatctgcgggtgtggatactattaaatctgcatccgtatccgtatccattaattagcgggcagttaaaatatccgtttatttgatccatggatatccat 15379140  T
Q  707 taagatatctgctccgttcccgtgatggattttatccg 744  Q
    ||| |||| ||||| ||  || ||| ||||||||||||    
T  15379141 taaaatatatgctcggtgtccatgacggattttatccg 15379178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 566 - 689
Target Start/End: Complemental strand, 38264198 - 38264075
Alignment:
Q  566 gtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattcattaattaaca 665  Q
    ||||| ||||||||||||||||||| | ||||||||||| ||| | |||||| || | || |||||||||||||| ||||||||||| ||||||||| |     
T  38264198 gtattaaggttatttatgtaatttaattggtttaatagcgggtatagatatctgcgggtgcggataccattaaattcacatccatatccattaattagcg 38264099  T
Q  666 gatagttaaaaaatccgtttattt 689  Q
    | ||||||||| |||| |||||||    
T  38264098 ggtagttaaaatatccatttattt 38264075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 34696743 - 34696821
Alignment:
Q  196 tccctccatcc-tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||| ||||||||||||||  ||||||||||||||||| | ||||||||||| |||||||||||||||||||    
T  34696743 tccctccatccctatatctaagcatccatttgattttatttttgttcctaaatgtaaaccccttttcaaattactagat 34696821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 338 - 400
Target Start/End: Complemental strand, 38264442 - 38264380
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagt 400  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  38264442 cataatattcatacattacaataacaacaaagatcattgactcaacaaaaatataaataaagt 38264380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 204 - 273
Target Start/End: Complemental strand, 3831281 - 3831212
Alignment:
Q  204 tcctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||  || ||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  3831281 tcctatatctaagcgccaatttgattttatttttgtccctaaatgtaaaccccttttcaaattactagat 3831212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 487 - 623
Target Start/End: Complemental strand, 17562746 - 17562605
Alignment:
Q  487 cacttttacttccttttaaagtagcgtaataactgataacactcacaatacc-----taggctgttttcttaagaaggtgaatggtattgaggttattta 581  Q
    |||||| |||||||||||||| ||| |||||||| |||| |||||||||||      |||  | ||||| || |||| |||||| |||||| ||||||||    
T  17562746 cactttcacttccttttaaaggagcataataactaataatactcacaatacaatacatagagttttttcctaggaagttgaatgatattgatgttattta 17562647  T
Q  582 tgtaatttactcggtttaatagcaggtgtggatatccgcagc 623  Q
    ||||||||| ||||||||||||| ||| ||||||||| ||||    
T  17562646 tgtaatttaatcggtttaatagcgggtatggatatccacagc 17562605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 25063456 - 25063375
Alignment:
Q  195 ctccctccatcc-tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagatac 275  Q
    |||||||||||| ||||| ||| || |  ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25063456 ctccctccatccctatatgtaaccacccatttgattttatttttgtccttaaatgtaaactccttttcaaattactagatac 25063375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 5084959 - 5085027
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||| |  ||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  5084959 cctatatctaagcacccatttgattttatttttgtccctaaatgtaaaccccttttcaaattactagat 5085027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 578 - 714
Target Start/End: Original strand, 33089058 - 33089192
Alignment:
Q  578 tttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaa 677  Q
    ||||||||||||||||| ||||||||||| | || |||||||| | |||||||||||||||||| ||||  || ||||| ||||||| | ||| |||||     
T  33089058 tttatgtaatttactcgatttaatagcagatatgaatatccgctgatgtggataccattaaatctacatttatcttcatcaattaac-ggtagctaaaat 33089156  T
Q  678 atccgtttattttattcatggatatccattaagatat 714  Q
    ||| ||||| |||| |||| |||||||||||| ||||    
T  33089157 atctgttta-tttaatcatagatatccattaaaatat 33089192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 349 - 400
Target Start/End: Complemental strand, 2191894 - 2191843
Alignment:
Q  349 tacattacaataataacaaaaatcattgactcaacaaaaacataaataaagt 400  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2191894 tacattacaataacaacaaaaatcattgactcaacaaaaacataaataaagt 2191843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 28723522 - 28723588
Alignment:
Q  207 tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||| |||  ||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  28723522 tatatctaagtatctatttgattttatttttgtccttaaatataaacatcttttcaaattactagat 28723588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 5321910 - 5321962
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagatac 275  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  5321910 tttgattttatttttgtccctaaatgtaaaccccttttcaaattactagatac 5321962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 15512651 - 15512719
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||| |||||| |  ||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  15512651 cctatatgtaagcacccatttgattttatttttgtccctaaatgtaaactccttttcaaattactagat 15512719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 28948834 - 28948902
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||| |||||| |  ||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  28948834 cctatatgtaagcacccatttgattttatttttgtccctaaatgtaaactccttttcaaattactagat 28948902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 206 - 273
Target Start/End: Original strand, 4817777 - 4817844
Alignment:
Q  206 ctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||| |  ||||||||||||||||||||||||||||||| | ||| |||||||||||||    
T  4817777 ctatatctaagcacccatttgattttatttttgtccttaaatgtaaactcatttccaaattactagat 4817844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 206 - 273
Target Start/End: Original strand, 4829577 - 4829644
Alignment:
Q  206 ctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||| |  ||||||||||||||||||||||||||||||| | ||| |||||||||||||    
T  4829577 ctatatctaagcacccatttgattttatttttgtccttaaatgtaaactcatttccaaattactagat 4829644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 52141047 - 52141113
Alignment:
Q  207 tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||| ||||||||  ||||||||||||||||||| ||||||||||| ||||||||||| |||||||    
T  52141047 tatatttaagcatccatttgattttatttttgtccctaaatgtaaactccttttcaaatcactagat 52141113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 668 - 764
Target Start/End: Complemental strand, 17562601 - 17562505
Alignment:
Q  668 tagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgtgatggattttatccgtggatatccacgggtgtgga 764  Q
    ||||||||||||   ||||||||||  |||||||||||||||| |||| |||||||  || ||   ||||||||||| |||||||||||||||||||    
T  17562601 tagttaaaaaatttatttattttatctatggatatccattaaggtatccgctccgtgtccatggcagattttatccgcggatatccacgggtgtgga 17562505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 32716025 - 32715958
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||| |  ||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  32716025 cctatatctaagcacccatttgattttatttttgtctctaaatgtaaac-ccttttcaaattactagat 32715958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 440 - 506
Target Start/End: Complemental strand, 2191811 - 2191744
Alignment:
Q  440 ctcatcatattcaacataaacaaaactt-ttgcttcaacaatcccaaccacttttacttccttttaaa 506  Q
    |||||||||||||||| ||||||||||| |||||||||||||||| |||||||| ||| |||| ||||    
T  2191811 ctcatcatattcaacaaaaacaaaacttcttgcttcaacaatcccgaccactttcactaccttctaaa 2191744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 9684588 - 9684654
Alignment:
Q  207 tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||  |||||||||||||||||  |||||||||||| |||||| |||||| |||||    
T  9684588 tatatctaagcatccatttgattttatttttgttattaaatgtaaacccctttttaaattattagat 9684654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 223 - 273
Target Start/End: Original strand, 28334108 - 28334158
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||| |||||||| ||||||||||| |||||||||||||||||||    
T  28334108 tttgattttacttttgtccctaaatgtaaaccccttttcaaattactagat 28334158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 223 - 273
Target Start/End: Complemental strand, 47643755 - 47643705
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  47643755 tttgattttatttttgtccataaatgtaaacccctttccaaattactagat 47643705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 671 - 756
Target Start/End: Complemental strand, 42507384 - 42507299
Alignment:
Q  671 ttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgtgatggattttatccgtggatatccacg 756  Q
    |||||||| ||||||||||||| ||||||||||||||||| |||| |||||||  | |||   |||||||| || |||||||||||    
T  42507384 ttaaaaaacccgtttattttatccatggatatccattaaggtatccgctccgtgtcagtggcagattttattcgcggatatccacg 42507299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 48721739 - 48721807
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||| || |  ||||||||||||||||||| ||||||||| |  ||||||||||||||||||    
T  48721739 cctatatctaaacacctatttgattttatttttgtccctaaatgtaaccctcttttcaaattactagat 48721807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 51390397 - 51390476
Alignment:
Q  195 ctccctccatcc-tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||| ||||||||| || |  ||||| |||| |||||||| ||||||||||| |||||| ||||||||||||    
T  51390397 ctccctccatccctatatctaaacacccatttgactttaattttgtccctaaatgtaaacccctttttaaattactagat 51390476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 205 - 267
Target Start/End: Complemental strand, 3143637 - 3143575
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaatta 267  Q
    ||||||| |||||| |  ||||||||||||||||||| |||||||| || |||||||||||||    
T  3143637 cctatatttaagcacccatttgattttatttttgtccctaaatgtacaccccttttcaaatta 3143575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 223 - 273
Target Start/End: Original strand, 7957575 - 7957625
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||| ||||||||||| ||||||||||||| ||| |||||||||||||||    
T  7957575 tttgactttatttttgttcttaaatgtaaacccctcttcaaattactagat 7957625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 205 - 275
Target Start/End: Original strand, 30898433 - 30898503
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagatac 275  Q
    |||||||||||| | |  ||||||||||||||||| | ||||||||||| | |||||||||||| ||||||    
T  30898433 cctatatctaagtacctatttgattttatttttgttcctaaatgtaaaccctttttcaaattaccagatac 30898503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 679 - 757
Target Start/End: Complemental strand, 36728622 - 36728544
Alignment:
Q  679 tccgtttattttattcatggatatccattaagatatctgctccgttcccgtgatggattttatccgtggatatccacgg 757  Q
    |||||||||||||| |||| || ||||| |||||||| |||||||  | |||  |||||||||||| ||||||||||||    
T  36728622 tccgtttattttatccatgtatgtccatgaagatatccgctccgtgtctgtggcggattttatccgcggatatccacgg 36728544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 223 - 268
Target Start/End: Complemental strand, 51997171 - 51997126
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattac 268  Q
    ||||||||||||||||||| ||||||||| | ||||||||||||||    
T  51997171 tttgattttatttttgtccctaaatgtaatccccttttcaaattac 51997126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 8878003 - 8877937
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||| || |||||||||| |||||| |||||||||||||   |||||||||||||||||    
T  8878003 cctatatctaagcaccaatttgatttta-ttttgttcttaaatgtaaac-tattttcaaattactagat 8877937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 273
Target Start/End: Complemental strand, 34012718 - 34012651
Alignment:
Q  206 ctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||    |||||||||||||||||| ||||||||||||   |||| ||||||||||||    
T  34012718 ctatatctaagcacatatttgattttatttttgtcgttaaatgtaaacttttttttaaattactagat 34012651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 353 - 400
Target Start/End: Original strand, 52252710 - 52252757
Alignment:
Q  353 ttacaataataacaaaaatcattgactcaacaaaaacataaataaagt 400  Q
    ||||||||| |||||| ||| ||||||||| |||||||||||||||||    
T  52252710 ttacaataacaacaaagatctttgactcaataaaaacataaataaagt 52252757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 253
Target Start/End: Complemental strand, 9293898 - 9293868
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaac 253  Q
    |||||||||||||||||||||||||||||||    
T  9293898 tttgattttatttttgtccttaaatgtaaac 9293868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 253
Target Start/End: Complemental strand, 12792938 - 12792908
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaac 253  Q
    |||||||||||||||||||||||||||||||    
T  12792938 tttgattttatttttgtccttaaatgtaaac 12792908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 273
Target Start/End: Complemental strand, 25269591 - 25269541
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||| |||||| | ||||| ||||| |||||||||||||||||||    
T  25269591 tttgattttacttttgttcctaaatataaaccccttttcaaattactagat 25269541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 29140549 - 29140595
Alignment:
Q  227 attttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||| |||||||||||||||||||| |||||| |||||| |||||    
T  29140549 attttacttttgtccttaaatgtaaacccctttttaaattattagat 29140595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 499 - 553
Target Start/End: Complemental strand, 31292718 - 31292664
Alignment:
Q  499 cttttaaagtagcgtaataactgataacactcacaatacctaggctgttttctta 553  Q
    |||| |||| |||||||||||| |||||||||||||||| || | ||||||||||    
T  31292718 ctttcaaaggagcgtaataactaataacactcacaatacttatggtgttttctta 31292664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 529 - 599
Target Start/End: Complemental strand, 36728684 - 36728615
Alignment:
Q  529 tcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggttta 599  Q
    |||||||||||||| | |||||||| |||| | |||| |||| || ||||||||||||||||||| |||||    
T  36728684 tcacaatacctaggtt-ttttcttaggaagttaaatgatattaagattatttatgtaatttactccgttta 36728615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 253
Target Start/End: Complemental strand, 44258046 - 44258016
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaac 253  Q
    |||||||||||||||||||||||||||||||    
T  44258046 tttgattttatttttgtccttaaatgtaaac 44258016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 683 - 724
Target Start/End: Complemental strand, 967890 - 967849
Alignment:
Q  683 tttattttattcatggatatccattaagatatctgctccgtt 724  Q
    ||||||||||  |||||||||||||||||||||| |||||||    
T  967890 tttattttatatatggatatccattaagatatctactccgtt 967849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 223 - 268
Target Start/End: Original strand, 12844031 - 12844076
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattac 268  Q
    |||| |||||||||||||| ||||||||||| |||||| |||||||    
T  12844031 tttgtttttatttttgtccctaaatgtaaacccctttttaaattac 12844076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 36085203 - 36085135
Alignment:
Q  205 cctatatctaagca-tcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||| ||| ||| ||||||||||||||| ||||||||||    |||||||||||||||||    
T  36085203 cctatatctaagcactca-tttaattttatttttgtccctaaatgtaaatcttttttcaaattactagat 36085135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 46591335 - 46591267
Alignment:
Q  205 cctatatctaagca-tcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||| ||| ||||| |||||||||||| ||| ||||||||   |||||||||||||||||    
T  46591335 cctatatctaagcactca-tttgactttatttttgtctttagatgtaaactttttttcaaattactagat 46591267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 270
Target Start/End: Original strand, 46732831 - 46732896
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattacta 270  Q
    ||||||||||| ||||  ||||| ||||||||||||| ||||||||||  | |||| |||||||||    
T  46732831 cctatatctaaacatctatttgactttatttttgtccctaaatgtaaatccttttttaaattacta 46732896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 345 - 707
Target Start/End: Complemental strand, 23809782 - 23809405
Alignment:
Q  345 ttcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa------- 437  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||           
T  23809782 ttcatacattacaataacaacaaagatcattgactcaacaaaaacataaaaaaagtcccttacatttaataaaaataaaattctttgatttaacaaaaac 23809683  T
Q  438 --------agctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactgataacact 529  Q
            || ||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||| |||||||||||| ||||||||    
T  23809682 ataagtaaagttcatcatattcaacataaacaaatcttttgcttcaacaatcccaaccactttcaattccttttaaaggagcgtaataacttataacact 23809583  T
Q  530 cacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtgga 629  Q
    |||||||| ||   |||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||| | ||||||    
T  23809582 cacaatacgtatcgtgttttcttaggaagttgaatgatattgaggttatttatgtaatttactcggtttaatagcaagtatggatatccgcgggtgtgga 23809483  T
Q  630 taccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccatt 707  Q
    ||||||||||||| ||||| ||| ||||||||| | | ||||||||||| | ||||||||||| |||| |||||||||    
T  23809482 taccattaaatccgcatccgtatccattaattagcgggtagttaaaaaacctgtttattttatccatgaatatccatt 23809405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 338 - 757
Target Start/End: Complemental strand, 11039300 - 11038866
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    ||||||||||||| |||||||||| || ||| |||||| ||  |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  11039300 cataatattcatagattacaataacaataaagatcattaacgaaacaaaaacacaaataaagtctcttacatttaataaaaataaagttctttgatttaa 11039201  T
Q  438 ---------------agctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactga 522  Q
                   || ||||||||||||| | |||||||  | |||| ||||||||||||||||||||||||||||||||||| |||||||||||  |    
T  11039200 caaaagtataagtaaagttcatcatattcaataaaaacaaagatattgcatcaacaatcccaaccacttttacttccttttaaaggagcgtaataacgaa 11039101  T
Q  523 taacactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcag 622  Q
    ||||||||||||||| || | | |||||||| ||||  |||||||||| || ||||||||| |||||||||||||||||||| ||| |||||||| || |    
T  11039100 taacactcacaatacgtatggttttttcttaggaagtggaatggtattaagcttatttatgaaatttactcggtttaatagccggtatggatatctgcgg 11039001  T
Q  623 ctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccg 722  Q
     |||||||||||||||||||  |||||||||||||||||| | | ||||||||||||||||||||||||| |||| |||||||||||| ||||||||||     
T  11039000 gtgtggataccattaaatccgtatccatattcattaattagcgggtagttaaaaaatccgtttattttatccatgaatatccattaaggtatctgctcca 11038901  T
Q  723 ttcccgtgatggattttatccgtggatatccacgg 757  Q
    |  |||||  |||||||||| |  |||||||||||    
T  11038900 tgtccgtggcggattttatctgccgatatccacgg 11038866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 436 - 756
Target Start/End: Complemental strand, 38440412 - 38440093
Alignment:
Q  436 aaagctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactgataacactcacaat 535  Q
    |||| ||||||||||||||| ||||||| || ||||| ||||||||||||||||||| |||||||||| ||| |||||||||||| |||||||||| |||    
T  38440412 aaagttcatcatattcaacaaaaacaaagctcttgctccaacaatcccaaccactttcacttccttttgaaggagcgtaataacttataacactcataat 38440313  T
Q  536 acctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccat 635  Q
    ||||||| ||||||||||| ||| |||||| ||||||| |||||||||||||||||||||||||||||  ||| |||||||| |||| ||||||||||||    
T  38440312 acctagggtgttttcttaaaaagttgaatgatattgagattatttatgtaatttactcggtttaatagtgggtatggatatctgcaggtgtggataccat 38440213  T
Q  636 taaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgtgatgga 735  Q
     |||||| ||||| ||| ||||||||| | | |||||||||||| ||||||||||||  |||||||||||||||| |||||| ||| | ||||||   ||    
T  38440212 caaatccgcatccgtatccattaattagcgggtagttaaaaaattcgtttattttatctatggatatccattaaggtatctgttccatgcccgtg-gaga 38440114  T
Q  736 ttttatccgtggatatccacg 756  Q
    ||||||||| | |||||||||    
T  38440113 ttttatccgcgtatatccacg 38440093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 338 - 721
Target Start/End: Complemental strand, 30541600 - 30541203
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgattta- 436  Q
    |||||||||||||||||||||||| |||||| |||||||||| || |||||||||||| |||||  |||||||||||||||||||||||||||||| ||     
T  30541600 cataatattcatacattacaataacaacaaagatcattgacttaagaaaaacataaatcaagtctattacatttaataaaaataaagttctttgatatat 30541501  T
Q  437 --------------aagctcatcatattcaacataaacaaaactt-ttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactg 521  Q
                  ||||||||||||||||||| |||||||  || || ||||||||||| |||||||||| |||||||||||||| || |||||||||     
T  30541500 caaaagcttaagtaaagctcatcatattcaaca-aaacaaagtttcttacttcaacaatctcaaccactttcacttccttttaaaggagtgtaataacta 30541402  T
Q  522 ataacactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgca 621  Q
    ||||||||||||||||| ||| | ||| |||| |||| |||| | |||| ||||||||||||||  ||||||||||||||| | | | |||||||| ||     
T  30541401 ataacactcacaataccaagggtttttgcttaggaagttgaaagttatt-aggttatttatgtatcttactcggtttaataacggatatggatatctgcg 30541303  T
Q  622 gctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctcc 721  Q
    | ||   |||||||||||||  ||||||||| ||||||||| | | ||||||||| || |||||||||||| ||||||||||||||||| |||| |||||    
T  30541302 ggtgcaaataccattaaatcggcatccatatccattaattagcgggtagttaaaatattcgtttattttatccatggatatccattaaggtatccgctcc 30541203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 457 - 715
Target Start/End: Original strand, 5973138 - 5973396
Alignment:
Q  457 aaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactgataacactcacaatacctaggctgttttcttaaga 556  Q
    |||||||  ||||||||||||||||||||||||||| | |||||||||||  ||||||||||||||||||||||||||||||||||   |||| ||| ||    
T  5973138 aaacaaaggttttgcttcaacaatcccaaccactttcaattccttttaaaagagcgtaataactgataacactcacaatacctaggtgttttttttagga 5973237  T
Q  557 aggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattcat 656  Q
    || |||||| |||||||||||||||||||||||||||| ||||||||| ||| ||||||||||| | |||| |||||||||||||| ||||  ||| |||    
T  5973238 agttgaatgatattgaggttatttatgtaatttactcgatttaatagcgggtatggatatccgcgggtgtgaataccattaaatccgcatctgtatccat 5973337  T
Q  657 taattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatc 715  Q
    ||||||   |||||||||||||| ||||||||||||  |||||| ||||||||| ||||    
T  5973338 taattagtggatagttaaaaaattcgtttattttatcaatggatttccattaaggtatc 5973396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 530 - 764
Target Start/End: Original strand, 33189541 - 33189775
Alignment:
Q  530 cacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtgga 629  Q
    ||||||||||||| | |||||||| || | ||||||||||| ||| |||||||||||||||||| || ||||| | | | ||  ||||||| | ||||||    
T  33189541 cacaatacctaggattttttcttaggatgttgaatggtattaaggatatttatgtaatttactctgtgtaataacggatatgtttatccgcgggtgtgga 33189640  T
Q  630 taccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgt 729  Q
    ||||||| ||| | ||||  ||| ||||||||| | | ||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||  ||||    
T  33189641 taccattgaattcgcatctgtatccattaattagcgggtagttaaaaaatccgtttattttatccatggatatccattaaggtatccgctccgtgtccgt 33189740  T
Q  730 gatggattttatccgtggatatccacgggtgtgga 764  Q
    |  |||||||||||| |||||||||||| ||||||    
T  33189741 ggcggattttatccgcggatatccacggatgtgga 33189775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 530 - 742
Target Start/End: Original strand, 7767217 - 7767429
Alignment:
Q  530 cacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtgga 629  Q
    ||||||||||||| | |||||||| |||| | |||| |||| |||||||||||||||||||||| |||||||||  ||| ||||||||||||| ||||||    
T  7767217 cacaatacctaggattttttcttaggaagttcaatgatattaaggttatttatgtaatttactcagtttaatagtgggtatggatatccgcaggtgtgga 7767316  T
Q  630 taccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgt 729  Q
    ||||||||||||   |||| | | |||||||||   | ||||||||||||||||||||||||||||||||||||||||||  |||| ||||| |  ||||    
T  7767317 taccattaaatctgaatccgtgtccattaattagggggtagttaaaaaatccgtttattttattcatggatatccattaaagtatccgctccatgtccgt 7767416  T
Q  730 gatggattttatc 742  Q
    |  ||||||||||    
T  7767417 ggcggattttatc 7767429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 560 - 761
Target Start/End: Complemental strand, 1052940 - 1052736
Alignment:
Q  560 tgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagc---tgtggataccattaaatccacatccatattcat 656  Q
    |||| |||||| ||||||||||||||||||| ||||| ||||||| ||| |||||||||||||    || |||||||||||||||||||||| ||| |||    
T  1052940 tgaaaggtattaaggttatttatgtaatttattcggtataatagcgggtatggatatccgcaggaggtgcggataccattaaatccacatccttatccat 1052841  T
Q  657 taattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgtgatggattttatccgtggatatccacg 756  Q
    |||||| | | ||||||||| ||||||||||||||| ||||||||||||||||| |||| |||||||  |||||  | ||||||||||  |||||||||     
T  1052840 taattagcgggtagttaaaatatccgtttattttatccatggatatccattaaggtatccgctccgtgtccgtggcgaattttatccgcagatatccaca 1052741  T
Q  757 ggtgt 761  Q
    |||||    
T  1052740 ggtgt 1052736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 338 - 437
Target Start/End: Original strand, 28636383 - 28636482
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  28636383 cataatattcatacattacaataaaaacaaagatcattgactcaacaaaaacataaataaagtctcttacatttaataaaaataaagttatttgatttaa 28636482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 38440555 - 38440455
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||    
T  38440555 cataatattcatacattacaataacaacaaagatcattgactcaacaaaaacataaataaagttccttgcatttaataaaaataatgttctttgatttaa 38440456  T
Q  438 a 438  Q
    |    
T  38440455 a 38440455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 512 - 747
Target Start/End: Complemental strand, 2943976 - 2943742
Alignment:
Q  512 gtaataactgataacactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtg 611  Q
    ||||||||| |||||| |||||||||| | | | ||| |||| |||| ||||  ||||| | ||||||||||||||||||||||||||||||| | | ||    
T  2943976 gtaataactaataacattcacaataccgatgatttttgcttaggaagttgaaatgtattaatgttatttatgtaatttactcggtttaatagcggatatg 2943877  T
Q  612 gatatccgcagctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaaga 711  Q
    ||||||||| | ||||||||||||||||||  ||| | || |||||||||| | | ||||||||| ||||||||||||||  |||  ||||||||||||     
T  2943876 gatatccgcggatgtggataccattaaatctgcattcgta-tcattaattagcgggtagttaaaatatccgtttattttacccataaatatccattaagg 2943778  T
Q  712 tatctgctccgttcccgtgatggattttatccgtgg 747  Q
    |||  |||||||  |||| | |||||||||||||||    
T  2943777 tattcgctccgtatccgtaacggattttatccgtgg 2943742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 338 - 437
Target Start/End: Original strand, 5972977 - 5973076
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    |||||||||||||||||||||||| || ||| ||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  5972977 cataatattcatacattacaataacaaaaaagatcattgactcaaaaaatacataaataaagtctcttacatttaataaaaataaagttatttgatttaa 5973076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 338 - 507
Target Start/End: Original strand, 36298791 - 36298976
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatt--- 434  Q
    |||||||| |||| |||||||||| |||||| ||||||||||||||||||||||||||||||| | ||| |||||||| ||||||||||||||||||       
T  36298791 cataatatccatatattacaataacaacaaagatcattgactcaacaaaaacataaataaagtactttatatttaatacaaataaagttctttgatttga 36298890  T
Q  435 ------------taaagctcatcatattcaacataaacaaaactt-ttgcttcaacaatcccaaccacttttacttccttttaaag 507  Q
                ||||||||||||||||||||| ||||||| ||| |||||||||||||||| |||||||| |||  |||||||||    
T  36298891 caaaagtataaataaagctcatcatattcaacaaaaacaaagcttattgcttcaacaatcccgaccactttcactatcttttaaag 36298976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 342 - 437
Target Start/End: Original strand, 7767084 - 7767179
Alignment:
Q  342 atattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||| ||  |||||||||||||| |||||||||||||||||||    
T  7767084 atattcatagattacaataacaacaaaaatcattgactcaacaaaaacatacataaaatcttttacatttaataaacataaagttctttgatttaa 7767179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 346 - 437
Target Start/End: Original strand, 33189415 - 33189504
Alignment:
Q  346 tcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    |||||||||||||||| || ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33189415 tcatacattacaataacaa-aaagatcattgactcaacaaaaacataaataaagtcc-ttacatttaataaaaataaagttctttgatttaa 33189504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 566 - 757
Target Start/End: Original strand, 36299062 - 36299252
Alignment:
Q  566 gtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattcattaattaaca 665  Q
    ||||| ||||||||||||||||||| | ||||||||||| ||| || |||||||  | || ||||||||||||||| ||||   ||| ||||||||| |     
T  36299062 gtattaaggttatttatgtaatttatt-ggtttaatagcgggtatgaatatccgtgggtgcggataccattaaatcaacatttgtatccattaattagcg 36299160  T
Q  666 gatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgtgatggattttatccgtggatatccacgg 757  Q
    | ||||||||| || | |||||||||| |||||||||||||||||||||| |||||||  |||||   ||||||||||| | ||||||||||    
T  36299161 ggtagttaaaatattcatttattttatccatggatatccattaagatatccgctccgtgtccgtggcagattttatccgcgaatatccacgg 36299252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 338 - 435
Target Start/End: Complemental strand, 1053232 - 1053135
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgattt 435  Q
    ||||||||||||||||||| |||| |||||| |||||| |||||||||||||||||||||| | |||| |||||||||||||||||||||||| ||||    
T  1053232 cataatattcatacattacgataacaacaaagatcattaactcaacaaaaacataaataaaattccttgcatttaataaaaataaagttctttcattt 1053135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 338 - 506
Target Start/End: Original strand, 31457272 - 31457464
Alignment:
Q  338 cataatattcatacattacaataataacaaaaa------tcattgactcaacaaaaacataaataaagtcccttacatttaataaaaat--aaagttctt 429  Q
    |||||||||||| ||||||||||| ||||||||      |||||||||||||||||||||||||||||| ||||| |||||||||||||  |||||||||    
T  31457272 cataatattcatgcattacaataacaacaaaaacaaagatcattgactcaacaaaaacataaataaagttccttatatttaataaaaataaaaagttctt 31457371  T
Q  430 tgatt---------------taaagctcatcatattcaacataaacaaaactt-ttgcttcaacaatcccaaccacttttacttccttttaaa 506  Q
    |||||               ||||| ||||||||||||||| ||||||||||| |||||||||||||||| || ||||| |||| ||||||||    
T  31457372 tgatttaacaaaagtataaataaagttcatcatattcaacaaaaacaaaacttcttgcttcaacaatcccgactactttcactttcttttaaa 31457464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 512 - 725
Target Start/End: Complemental strand, 22519100 - 22518889
Alignment:
Q  512 gtaataactgataacactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtg 611  Q
    ||||||||| ||||| ||||||||||| ||| | ||| |||| |||| |||| | |||| || |||||||||||||||| ||  ||||||| |  || ||    
T  22519100 gtaataactaataaccctcacaataccgaggttttttcctta-gaagttgaaagatattaagtttatttatgtaatttattcaatttaataacgtgtatg 22519002  T
Q  612 gatatccgcagctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaaga 711  Q
    |||||| || | || ||||||||||||| |||||||| ||| ||||| ||  ||| ||||||||| ||  |||||||||||  ||||||||||||||||     
T  22519001 gatatctgctgatgcggataccattaaacccacatccgtatccattatttg-caggtagttaaaatatttgtttattttatctatggatatccattaagg 22518903  T
Q  712 tatctgctccgttc 725  Q
    ||| ||||||||||    
T  22518902 tatttgctccgttc 22518889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 339 - 410
Target Start/End: Original strand, 25502158 - 25502229
Alignment:
Q  339 ataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatt 410  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||| ||||||||    
T  25502158 ataatattcatacattacattaacaacaaagatcattgactcaacaaaaacataaataaagtctcttacatt 25502229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 351 - 437
Target Start/End: Complemental strand, 2944176 - 2944090
Alignment:
Q  351 cattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    ||||||||||| |||||| ||||||||||| ||||||||| |||||| ||  ||||||||||||||| |||||||||||||||||||    
T  2944176 cattacaataacaacaaagatcattgactcgacaaaaacaaaaataatgtttcttacatttaataaatataaagttctttgatttaa 2944090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 338 - 437
Target Start/End: Complemental strand, 22519312 - 22519214
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    ||||||||  ||||||||||| || ||||||  ||||||||||||| ||| |||||||||||| | ||||||||||||||| ||||||||||||||||||    
T  22519312 cataatatctatacattacaaaaacaacaaagttcattgactcaacgaaa-cataaataaagttcattacatttaataaaagtaaagttctttgatttaa 22519214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 550 - 755
Target Start/End: Original strand, 47925078 - 47925282
Alignment:
Q  550 cttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatcca 649  Q
    ||||||||| |||| | |||| |||||||||||||| |||| |  |||||||||| ||  |||||||  |  | || |||||||||||||||||| | |     
T  47925078 cttaagaagttgaaagatattaaggttatttatgta-tttagtaagtttaatagcgggcatggatatttgtgggtgcggataccattaaatccactttcg 47925176  T
Q  650 tattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgtgatggattttatccgtggat 749  Q
    ||| ||||||||||  | ||||||||| |||  ||||||||||  | |||||||||||||| |||| | |||||  |||||  |||||||||||| ||||    
T  47925177 tatccattaattaatgggtagttaaaatatctatttattttatctaaggatatccattaaggtatccgttccgtgtccgtggcggattttatccgcggat 47925276  T
Q  750 atccac 755  Q
    ||||||    
T  47925277 atccac 47925282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 338 - 418
Target Start/End: Complemental strand, 15954748 - 15954668
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaa 418  Q
    |||||||  ||||||| ||||||| |||||| |||||||||||| |||||||||||||||||| ||| |||||||||||||    
T  15954748 cataatagacatacatgacaataacaacaaagatcattgactcaccaaaaacataaataaagttcctaacatttaataaaa 15954668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 627 - 723
Target Start/End: Original strand, 27337317 - 27337413
Alignment:
Q  627 ggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgt 723  Q
    |||||||||||||||| ||||| |||  |||||||| | | ||||||||| |||| |||||||||||| ||||||||||||||| |||| |||||||    
T  27337317 ggataccattaaatccgcatccgtatctattaattagcgggtagttaaaatatccatttattttattcgtggatatccattaaggtatccgctccgt 27337413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 10685329 - 10685250
Alignment:
Q  195 ctccctccatcct-atatctaagca-tcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||| |||| ||||||||||| ||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  10685329 ctccctccgtccttatatctaagcactca-tttgattttatttttgtccctaaatgtaaaccccttttcaaattactagat 10685250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 19235936 - 19236004
Alignment:
Q  205 cctatatctaagca-tcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||| ||| ||||| ||||||||||||| ||||||||||| |||||||||||||||||||    
T  19235936 cctatatctaagcactca-tttgactttatttttgtccctaaatgtaaactccttttcaaattactagat 19236004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 48767799 - 48767731
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||  |  ||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  48767799 cctatatctaagcccccatttgattttatttttgtccctaaatgtaaaccccctttcaaattactagat 48767731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 210 - 273
Target Start/End: Complemental strand, 8318760 - 8318697
Alignment:
Q  210 atctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||  |||||  |||||||||||| ||||||||||| |||||||||||||||||||    
T  8318760 atctaagcatccatttgacgttatttttgtccctaaatgtaaaccccttttcaaattactagat 8318697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 662
Target Start/End: Original strand, 25502330 - 25502447
Alignment:
Q  546 ttttcttaagaaggtgaatggtattgaggt--tatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatcca 643  Q
    |||||||| |||| ||||||||||||||||  ||||||  ||||||||||| ||||||||| | | |  |||||||| | |||| ||||||||||||||     
T  25502330 ttttcttaggaagttgaatggtattgaggttatatttacataatttactcgatttaatagcggatataaatatccgc-ggtgtgaataccattaaatccg 25502428  T
Q  644 catccatattcattaatta 662  Q
    |||| |||| |||||||||    
T  25502429 catctatatccattaatta 25502447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 207 - 266
Target Start/End: Original strand, 42983487 - 42983546
Alignment:
Q  207 tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaatt 266  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||| | ||||||||||    
T  42983487 tatatctaagcatcaatttgattttatttttgtctttaaatataaactcattttcaaatt 42983546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 223 - 273
Target Start/End: Complemental strand, 35128601 - 35128551
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||||||||    
T  35128601 tttgattttatttttgtccctaaatgtaaacctcttttcaaattactagat 35128551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 572 - 697
Target Start/End: Original strand, 2891187 - 2891312
Alignment:
Q  572 aggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattcattaattaacagatagt 671  Q
    |||||||||||||| ||||||   ||||||||| ||| ||||||||||||| |||||||| ||| ||||   ||| ||||| |||||| ||| || || |    
T  2891187 aggttatttatgtagtttacttattttaatagcgggtatggatatccgcagatgtggatatcatcaaatatgcattcatatccattaaataataggtaat 2891286  T
Q  672 taaaaaatccgtttattttattcatg 697  Q
    | ||| ||| ||||||||||| ||||    
T  2891287 tgaaatatctgtttattttatccatg 2891312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 1324941 - 1324873
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||  |  ||| ||||||||||||||| ||||||||||| || ||||||||||||||||    
T  1324941 cctatatctaagcccccattttattttatttttgtccctaaatgtaaaccccctttcaaattactagat 1324873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 4089372 - 4089440
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||| || |  ||||||||||||||||||| ||||||||||| | |||| ||||||||||||    
T  4089372 cctatatctaaacacccatttgattttatttttgtccctaaatgtaaactctttttaaaattactagat 4089440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 21388476 - 21388408
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||| |||||| |  ||||||||||||||||||  ||||||||||| ||||| |||||||||||||    
T  21388476 cctatatttaagcacccatttgattttatttttgtctctaaatgtaaacccctttccaaattactagat 21388408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 26633080 - 26633012
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||| |||||| |  ||||||||||||||||||| |||||||| ||  ||||||||||||||||||    
T  26633080 cctatatgtaagcacccatttgattttatttttgtccctaaatgtagacttcttttcaaattactagat 26633012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 338 - 434
Target Start/End: Original strand, 27336942 - 27337038
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatt 434  Q
    ||||||||  ||| |||| || || |||||| ||| ||||||||| ||||||||| ||||||| |  ||||||||||| ||||||| ||||||||||    
T  27336942 cataatatcgatagattataacaacaacaaagatccttgactcaataaaaacatagataaagttcactacatttaatagaaataaaattctttgatt 27337038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 205 - 272
Target Start/End: Original strand, 2276450 - 2276517
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactaga 272  Q
    ||||||| |||||| |  ||||||||||||||||||| ||||||||||   |||||||||||||||||    
T  2276450 cctatatataagcacccatttgattttatttttgtccctaaatgtaaatcgcttttcaaattactaga 2276517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 567 - 618
Target Start/End: Complemental strand, 15953945 - 15953894
Alignment:
Q  567 tattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatcc 618  Q
    |||| ||||||||||||||||||||||| ||||||||| ||| |||||||||    
T  15953945 tattaaggttatttatgtaatttactcgatttaatagcgggtatggatatcc 15953894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 441 - 492
Target Start/End: Original strand, 25502265 - 25502316
Alignment:
Q  441 tcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttt 492  Q
    ||||||||||||||| |||||||  | |||||||||||||||||||||||||    
T  25502265 tcatcatattcaacaaaaacaaagatcttgcttcaacaatcccaaccacttt 25502316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 222 - 273
Target Start/End: Complemental strand, 37673954 - 37673903
Alignment:
Q  222 gtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||||||||  ||||||||||| |||||| ||||||||||||    
T  37673954 gtttgattttatttttgtctctaaatgtaaactcctttttaaattactagat 37673903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 223 - 274
Target Start/End: Original strand, 43601057 - 43601108
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagata 274  Q
    ||||| ||||||||||||| |||||||||||  |||||||||||||||||||    
T  43601057 tttgactttatttttgtccataaatgtaaaccacttttcaaattactagata 43601108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 440 - 517
Target Start/End: Complemental strand, 2944072 - 2943994
Alignment:
Q  440 ctcatcatattcaacataaacaaa-acttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaata 517  Q
    |||||||||||||||| ||| ||| | ||||||||||| |||||| | |||||| |||||||||||| | |||||||||    
T  2944072 ctcatcatattcaacaaaaataaatatttttgcttcaaaaatcccgatcactttcacttccttttaaggaagcgtaata 2943994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 223 - 273
Target Start/End: Original strand, 5333788 - 5333838
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||| ||||||||||||| ||||||||||| |||||| ||||||||||||    
T  5333788 tttgactttatttttgtccctaaatgtaaacccctttttaaattactagat 5333838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 655 - 721
Target Start/End: Complemental strand, 43427145 - 43427079
Alignment:
Q  655 attaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctcc 721  Q
    ||||| || |||||| |||||| |||| |||||||||||||||||| ||||||||| |||| |||||    
T  43427145 attaaatagcagataattaaaatatccatttattttattcatggatgtccattaaggtatccgctcc 43427079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 338 - 399
Target Start/End: Original strand, 47924990 - 47925054
Alignment:
Q  338 cataatattcatacattacaataataacaaaaa---tcattgactcaacaaaaacataaataaag 399  Q
    |||||||| |||||||||||| |||||||| ||   || ||||||||||||||||||||||||||    
T  47924990 cataatatacatacattacaacaataacaataaagatccttgactcaacaaaaacataaataaag 47925054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 223 - 273
Target Start/End: Original strand, 48610027 - 48610076
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||||||| |||||||||||  |||||||||||||||||||    
T  48610027 tttgattttatttttgtctttaaatgtaaa-tccttttcaaattactagat 48610076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 21759954 - 21759886
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||| |||| |||  ||||||||||| ||||||| ||||||||||| |  ||||||||||||||||    
T  21759954 cctatatgtaagaatccatttgattttatgtttgtccctaaatgtaaactctatttcaaattactagat 21759886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 36726043 - 36726111
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||  |  ||||||||||||||||||  ||||||||||| |  ||||||||||||||||    
T  36726043 cctatatctaagcccccatttgattttatttttgtctctaaatgtaaacccactttcaaattactagat 36726111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 435 - 517
Target Start/End: Complemental strand, 1053090 - 1053007
Alignment:
Q  435 taaagctcatcatattcaacataaacaaaa-cttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaata 517  Q
    |||| |||||||||||||||| | |||||  || |||||||||||||||| ||||| ||||||  ||||||||| || ||||||    
T  1053090 taaatctcatcatattcaacaaagacaaagtctattgcttcaacaatcccgaccacgtttactatcttttaaaggagtgtaata 1053007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 253
Target Start/End: Original strand, 14801818 - 14801849
Alignment:
Q  222 gtttgattttatttttgtccttaaatgtaaac 253  Q
    ||||||||||||||||||||||||||||||||    
T  14801818 gtttgattttatttttgtccttaaatgtaaac 14801849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 253
Target Start/End: Original strand, 15248810 - 15248841
Alignment:
Q  222 gtttgattttatttttgtccttaaatgtaaac 253  Q
    ||||||||||||||||||||||||||||||||    
T  15248810 gtttgattttatttttgtccttaaatgtaaac 15248841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 435 - 505
Target Start/End: Complemental strand, 15954090 - 15954019
Alignment:
Q  435 taaagctcatcatattcaacataaacaaaactt-ttgcttcaacaatcccaaccacttttacttccttttaa 505  Q
    ||||||| ||||||| ||||| ||| ||||||| |||||||||||||| | | |||||| ||||||||||||    
T  15954090 taaagctgatcatatccaacaaaaataaaacttcttgcttcaacaatctcgatcactttcacttccttttaa 15954019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 443 - 505
Target Start/End: Complemental strand, 22519193 - 22519130
Alignment:
Q  443 atcatattcaacataaacaaaactt-ttgcttcaacaatcccaaccacttttacttccttttaa 505  Q
    ||||||||||||| |||||||  || ||| |||||||||||| |||||||| ||||||||||||    
T  22519193 atcatattcaacaaaaacaaagtttcttgtttcaacaatcccgaccactttcacttccttttaa 22519130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 37491480 - 37491539
Alignment:
Q  195 ctccctccatcc-tatatctaagcatcagtttgattttatttttgtccttaaatgtaaac 253  Q
    |||||||| ||| ||||||||||||||  ||||| ||||||||| |||||||||||||||    
T  37491480 ctccctccgtccatatatctaagcatctatttgactttatttttatccttaaatgtaaac 37491539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 270
Target Start/End: Original strand, 47458060 - 47458123
Alignment:
Q  207 tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattacta 270  Q
    ||||||||| ||||  ||| ||||||||||||||| ||||||||||  |||||| |||||||||    
T  47458060 tatatctaatcatctatttaattttatttttgtccctaaatgtaaattcctttttaaattacta 47458123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 273
Target Start/End: Original strand, 18121933 - 18121982
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||| ||||||||||||| ||||||||||| |||||| ||||||||||||    
T  18121933 tttgactttatttttgtccctaaatgtaaac-cctttttaaattactagat 18121982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 273
Target Start/End: Complemental strand, 20123661 - 20123612
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||||||| ||||||||||| || ||||||||||| ||||    
T  20123661 tttgattttatttttgtccctaaatgtaaac-ccctttcaaattacaagat 20123612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 273
Target Start/End: Original strand, 31365713 - 31365763
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||||||  ||||||||||| | ||||||||||| |||||    
T  31365713 tttgattttatttttgtctgtaaatgtaaactctttttcaaattattagat 31365763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 253
Target Start/End: Complemental strand, 36858409 - 36858379
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaac 253  Q
    |||||||||||||||||||||||||||||||    
T  36858409 tttgattttatttttgtccttaaatgtaaac 36858379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 37048275 - 37048198
Alignment:
Q  195 ctccctccatcctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||| |||||||||||| || |  ||||| ||||||||||| | ||||||| |||  ||||||||||||||||||    
T  37048275 ctccctccgtcctatatctaaacacctatttgactttatttttgt-cataaatgttaacttcttttcaaattactagat 37048198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 223 - 268
Target Start/End: Original strand, 25098275 - 25098320
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattac 268  Q
    |||| |||||||||||||||||||||||||  | ||||||||||||    
T  25098275 tttgtttttatttttgtccttaaatgtaaatcctttttcaaattac 25098320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 441 - 478
Target Start/End: Original strand, 28636501 - 28636538
Alignment:
Q  441 tcatcatattcaacataaacaaaacttttgcttcaaca 478  Q
    |||||||||||||||||||||||  |||||||||||||    
T  28636501 tcatcatattcaacataaacaaagtttttgcttcaaca 28636538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 29983511 - 29983482
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaa 252  Q
    ||||||||||||||||||||||||||||||    
T  29983511 tttgattttatttttgtccttaaatgtaaa 29983482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 340 - 377
Target Start/End: Complemental strand, 40910604 - 40910567
Alignment:
Q  340 taatattcatacattacaataataacaaaaatcattga 377  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  40910604 taatattcatacattacaataacaacaaagatcattga 40910567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 196; Significance: 1e-106; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 338 - 760
Target Start/End: Original strand, 38951638 - 38952075
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||| ||||| |||||||||||||||||   ||||||||||||||||||||||||    
T  38951638 cataatattcatacattacaataacaacaaagatcattgactcaacaaacacatatataaagtcccttacattagctaaaaataaagttctttgatttaa 38951737  T
Q  438 ---------------agctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactga 522  Q
                   |||||||||||||||||| ||||||| || ||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||    
T  38951738 caaaaacataagtaaagctcatcatattcaacaaaaacaaagctcttgcttcaacaatcccaaccactttcacttcattttaaaggagcgtaataactga 38951837  T
Q  523 taacactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcag 622  Q
    |||||||||||||||||| | |||||||| | |||| |||||| ||||||||||||||||||||||| |||||||||||||| | | ||||||   || |    
T  38951838 taacactcacaatacctaaggtgttttctcaggaagttgaatgatattgaggttatttatgtaatttcctcggtttaatagcggatatggataaatgcgg 38951937  T
Q  623 ctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccg 722  Q
     |||| |||||||||||||| ||||  ||| ||||||||| | | ||||||||||||| ||||||||||| | || |||||||||||  |||| ||||||    
T  38951938 gtgtgaataccattaaatccgcatctgtatccattaattagcgggtagttaaaaaatctgtttattttatccgtgaatatccattaatgtatccgctccg 38952037  T
Q  723 ttcccgtgatggattttatccgtggatatccacgggtg 760  Q
    | || |||  |||||||||||| |||||||||||||||    
T  38952038 tacctgtggcggattttatccgcggatatccacgggtg 38952075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 338 - 764
Target Start/End: Original strand, 19841758 - 19842187
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    |||||||| | ||||||||||||| |||||| ||||||||||||||||||| ||            ||||||||||||||||||||||||||||||||||    
T  19841758 cataatatccgtacattacaataacaacaaagatcattgactcaacaaaaatat------------ttacatttaataaaaataaagttctttgatttaa 19841845  T
Q  438 ---------------agctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactga 522  Q
                   || ||||||||||||| | ||| ||| || |||| |||||||||||||||| ||| |||||||||||||  |||||||||||| |    
T  19841846 caaaagcataagtaaagttcatcatattcaagaaaaataaagctattgcatcaacaatcccaaccattttcacttccttttaaatgagcgtaataactaa 19841945  T
Q  523 taacactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcag 622  Q
    |||||||||||||||||||| | ||||||||  ||  |||||| |||| ||||||||||||||||||||||||||||||||||||| | ||||| ||| |    
T  19841946 taacactcacaatacctagggttttttcttagaaaattgaatgatattaaggttatttatgtaatttactcggtttaatagcaggtattgatattcgcgg 19842045  T
Q  623 ctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccg 722  Q
     |||||| |||||||||||| ||||  ||| ||||||||| |   ||||||||||||||||||||||||| ||||||||||||||||| ||||  |||||    
T  19842046 gtgtggaaaccattaaatccgcatctttatccattaattagcgattagttaaaaaatccgtttattttatccatggatatccattaaggtatccactccg 19842145  T
Q  723 ttcccgtgatggattttatccgtggatatccacgggtgtgga 764  Q
    |  |||||  |||||||||||||||||||||| || ||||||    
T  19842146 tgtccgtggcggattttatccgtggatatccatggatgtgga 19842187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 346 - 536
Target Start/End: Original strand, 41039359 - 41039563
Alignment:
Q  346 tcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgattta--------- 436  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||             
T  41039359 tcatacattacaataacaacaaagatcattgactcaacaaaaacataaataaagtctcttacatttaataaaaataaagttctttgatttaacaaaaaca 41039458  T
Q  437 -----aagctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactgataacactca 531  Q
         ||   ||||||||||||||||| |||| |||||||||||||||| ||||||||||| | |||||||||||| |||||||||||||||||||||||    
T  41039459 taagtaaaaccatcatattcaacataagcaaagcttttgcttcaacaattccaaccactttcatttccttttaaaggagcgtaataactgataacactca 41039558  T
Q  532 caata 536  Q
    |||||    
T  41039559 caata 41039563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 560 - 756
Target Start/End: Complemental strand, 8819168 - 8818972
Alignment:
Q  560 tgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattcattaa 659  Q
    |||| |||||| | ||||||||||||||||| |  |||||||||| ||| ||||||||||| | || |||||||||||||||| ||||||||| ||||||    
T  8819168 tgaaaggtattaatgttatttatgtaatttatttagtttaatagcgggtatggatatccgcgggtgcggataccattaaatccgcatccatatccattaa 8819069  T
Q  660 ttaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgtgatggattttatccgtggatatccacg 756  Q
    ||||||||||||||||| ||||||||||||||| |||| |||||| ||||| |||| ||| |||  |||||| |||||||||||| |||||||||||    
T  8819068 ttaacagatagttaaaatatccgtttattttatccatgaatatccgttaaggtatccgcttcgtgtccgtgacggattttatccgcggatatccacg 8818972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 338 - 582
Target Start/End: Original strand, 22278330 - 22278589
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatt--- 434  Q
    |||||||| ||| ||| ||  ||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||       
T  22278330 cataatatccatgcatcacggtaacaacaaagatcattgacttaacaaaaacataaataaagtcccttacatttaataaaaataaaattctttgatttaa 22278429  T
Q  435 ------------taaagctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactga 522  Q
                ||||| |||| |||||  ||| ||||||| || |||| |||| |||| |||||||||| |||||||||||||  |||||||||||| |    
T  22278430 caaaaacataagtaaagttcataatatttgacaaaaacaaagctcttgcatcaaaaatctcaaccactttcacttccttttaaaagagcgtaataactaa 22278529  T
Q  523 taacactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttat 582  Q
    |||||||||||||||||||  | |||||||| |||  | |||||| || |||||||||||    
T  22278530 taacactcacaatacctagagttttttcttaggaaattaaatggtgttaaggttatttat 22278589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 576 - 754
Target Start/End: Original strand, 41041707 - 41041885
Alignment:
Q  576 tatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattcattaattaacagatagttaaa 675  Q
    |||| |||||| ||||||||||||||||| ||| ||||| ||||| | |||||||| |||||||| | ||||  |||  |||||||| | | ||||||||    
T  41041707 tattgatgtaacttactcggtttaatagcgggtatggatgtccgcgggtgtggatatcattaaattcgcatctgtatctattaattagcgggtagttaaa 41041806  T
Q  676 aaatccgtttattttattcatggatatccattaagatatctgctccgttcccgtgatggattttatccgtggatatcca 754  Q
    |||||| |||||||||| |||  |||||||||||| |||| ||||||| ||||| |||||||||||||| |||||||||    
T  41041807 aaatccatttattttatccataaatatccattaaggtatccgctccgtgcccgtaatggattttatccgcggatatcca 41041885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 338 - 517
Target Start/End: Original strand, 42555329 - 42555524
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatt--- 434  Q
    |||||||| ||||||||||||||| ||||||  |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||       
T  42555329 cataatatacatacattacaataacaacaaagttcattgactcaacaaaaacataaataaagatccttacatttaataaaaataaagttctttaatttaa 42555428  T
Q  435 ------------taaagctcatcatattcaacataaacaaaactt-ttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaata 517  Q
                ||||| | ||||||||||||| ||||||| ||| |||||||||| ||||| |||||||| |||||||||||||| || ||||||    
T  42555429 caaaagcataaataaaggttatcatattcaacaaaaacaaagcttattgcttcaacgatcccgaccactttcacttccttttaaagaagtgtaata 42555524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 530 - 692
Target Start/End: Original strand, 43624569 - 43624728
Alignment:
Q  530 cacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtgga 629  Q
    ||||||||||||| | |||| ||| |||| |||||| |||| ||||||||||||||||||||||||||||||||| ||| |||||||||||   ||||||    
T  43624569 cacaatacctagggttttttgttaggaagttgaatgatattaaggttatttatgtaatttactcggtttaatagcgggtatggatatccgcgagtgtgga 43624668  T
Q  630 taccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttat 692  Q
    ||||||   |||| ||||| ||| ||||||||| | | |||||||||||||||||| ||||||    
T  43624669 taccat---atccgcatccgtatccattaattagcgggtagttaaaaaatccgtttgttttat 43624728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 512 - 755
Target Start/End: Complemental strand, 40714746 - 40714504
Alignment:
Q  512 gtaataactgataacactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtg 611  Q
    ||||||||| |||||||||||||||| |||| | ||| ||||| ||| |||| |||||| | |||||||||||||||||||||||||||||||  || ||    
T  40714746 gtaataactaataacactcacaatacttaggttttttgcttaaaaagttgaaaggtattaaagttatttatgtaatttactcggtttaatagcgagtatg 40714647  T
Q  612 gatatccgcagctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaaga 711  Q
    ||||||||| | || |||| ||||||||||  ||||  ||| || ||||| |  | ||||||||| |||| ||||||||||  ||  |||||||||||      
T  40714646 gatatccgcgggtgcggatgccattaaatctgcatctgtatccactaatt-agtggtagttaaaatatccatttattttatcgataaatatccattaatg 40714548  T
Q  712 tatctgctccgttcccgtgatggattttatccgtggatatccac 755  Q
    |||| ||| ||| || |||| ||||||||| || ||||||||||    
T  40714547 tatccgcttcgtgcctgtgacggattttattcgcggatatccac 40714504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 550 - 720
Target Start/End: Original strand, 42555580 - 42555750
Alignment:
Q  550 cttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatcca 649  Q
    |||| |||| |||| |||||| ||| ||||||||||||||||| |||||||||||  || ||||||| ||  | || ||||| |||||||||||||| ||    
T  42555580 cttaggaagttgaaaggtattaaggatatttatgtaatttacttggtttaatagcgagtatggatattcgtgggtgcggatatcattaaatccacattca 42555679  T
Q  650 tattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctc 720  Q
    |||||||||||||   | ||||||||| ||| ||||||||||||||| ||||||||||||| |||| ||||    
T  42555680 tattcattaattagttggtagttaaaatatctgtttattttattcattgatatccattaaggtatccgctc 42555750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 560 - 744
Target Start/End: Complemental strand, 36464678 - 36464494
Alignment:
Q  560 tgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattcattaa 659  Q
    |||| |||||| ||||||||||||||||||| || ||||||||||  ||  ||||||  || | || ||||| |||||||||| ||||| |||  |||||    
T  36464678 tgaaaggtattaaggttatttatgtaatttattcagtttaatagcgagtaaggatatttgcgggtgcggatatcattaaatccgcatccgtatctattaa 36464579  T
Q  660 ttaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgtgatggattttatccg 744  Q
    ||| | ||||||||||| ||||||||||||||| ||||||||||| ||||| |||| |||||||  |||||  ||||||||||||    
T  36464578 ttagcggatagttaaaatatccgtttattttatccatggatatccgttaaggtatccgctccgtgtccgtggcggattttatccg 36464494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 338 - 437
Target Start/End: Original strand, 29117038 - 29117137
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    ||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||  | ||||||||||||||||||||| ||| ||||||    
T  29117038 cataatattcatacattacaataataacaaagatcattgatttaacaaaaacataaataaagtctttgacatttaataaaaataaagtttttttatttaa 29117137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 339 - 437
Target Start/End: Complemental strand, 40714964 - 40714866
Alignment:
Q  339 ataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    |||||||  ||||||||||||||  ||||| |||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||    
T  40714964 ataatatcaatacattacaataaagacaaagatcattgactcaacaaaaacataaataatgttccttacttttaataaaaataaagttctttgatttaa 40714866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 560 - 719
Target Start/End: Original strand, 51357451 - 51357604
Alignment:
Q  560 tgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattcattaa 659  Q
    |||| |||||| ||||||||||||||||||| || |||||||||| ||| ||||||||||  | ||||||||||||||||||| ||||       |||||    
T  51357451 tgaaaggtattaaggttatttatgtaatttattcagtttaatagcgggtatggatatccgtgggtgtggataccattaaatccgcatc------aattaa 51357544  T
Q  660 ttaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgct 719  Q
    ||| |||||| |||||| ||||||||||||||| |||  |||||||||||| ||||||||    
T  51357545 ttagcagataattaaaatatccgtttattttatccataaatatccattaaggtatctgct 51357604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 338 - 435
Target Start/End: Complemental strand, 8819425 - 8819328
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgattt 435  Q
    ||||||||  |||||||| ||||| |||||| |||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||    
T  8819425 cataatatctatacattataataacaacaaagatcattgattcaacaaaaacataaataaagttccttacatttaataaaagtaaagttatttgattt 8819328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 581 - 760
Target Start/End: Original strand, 22279277 - 22279455
Alignment:
Q  581 atgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatc 680  Q
    |||||||||||||||||||||||| | | ||||||||||| | ||||||||| ||||||||  ||||  ||| ||||||||||| | ||||| |||||||    
T  22279277 atgtaatttactcggtttaatagcggatttggatatccgcgggtgtggatactattaaatctgcatctgtatccattaattaacgggtagtt-aaaaatc 22279375  T
Q  681 cgtttattttattcatggatatccattaagatatctgctccgttcccgtgatggattttatccgtggatatccacgggtg 760  Q
    | |||||||||| ||||||||||| |||||  ||| | | |||  || ||  |||||||||||| ||| |||||||||||    
T  22279376 catttattttatccatggatatcctttaagggatccgtttcgtgtccatggcggattttatccgcggaaatccacgggtg 22279455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 338 - 517
Target Start/End: Original strand, 23626859 - 23627051
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatt--- 434  Q
    |||||||| |||| |||||||||| |||||| |||||||||||||||||||||||||||| || |||||||||    ||| ||||||||||||||||       
T  23626859 cataatatccatatattacaataacaacaaagatcattgactcaacaaaaacataaataaggttccttacatt---caaatataaagttctttgatttaa 23626955  T
Q  435 ------------taaagctcatcatattcaacataaacaaaactt-ttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaata 517  Q
                |||||||||||||||| |||| ||||||||||| ||||||||||||||||||| ||||| |||| ||||| ||| || ||||||    
T  23626956 caaaagcatatataaagctcatcatatttaacaaaaacaaaacttcttgcttcaacaatcccaactactttcactttcttttgaaggagtgtaata 23627051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 338 - 507
Target Start/End: Original strand, 51357186 - 51357370
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgattt-- 435  Q
    |||||||| ||||||||||||||| |||||| || |||||||||||| |||||||||||| || ||||||||||||||||||||||||| |||||| |      
T  51357186 cataatatccatacattacaataacaacaaagattattgactcaacagaaacataaataa-gttccttacatttaataaaaataaagttatttgatatga 51357284  T
Q  436 -------------aaagctcatcatattcaacataaacaaaactt-ttgcttcaacaatcccaaccacttttacttccttttaaag 507  Q
                 |||||||||||||||||||| ||||||| ||| ||| |||||||||||| |||||||| |||  |||||||||    
T  51357285 caaaagtataaataaagctcatcatattcaacaaaaacaaagcttattgtttcaacaatcccgaccactttcactatcttttaaag 51357370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 629 - 757
Target Start/End: Complemental strand, 40568745 - 40568617
Alignment:
Q  629 ataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccg 728  Q
    |||||||||||||| ||||| ||| ||||||||| | | ||||||||| |||| |||||||||| | ||||||||||||||| |||| |||||||  |||    
T  40568745 ataccattaaatccgcatccgtatccattaattagcgggtagttaaaatatccatttattttatccgtggatatccattaaggtatccgctccgtgtccg 40568646  T
Q  729 tgatggattttatccgtggatatccacgg 757  Q
    ||  | |||||||||| ||||||||||||    
T  40568645 tggcgaattttatccgcggatatccacgg 40568617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 575 - 722
Target Start/End: Original strand, 29117274 - 29117421
Alignment:
Q  575 ttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattcattaattaacagatagttaa 674  Q
    |||||||||||||||| || |||||||||| |   ||||||||||| | || ||||||| |||||||| ||||| ||| ||||||||| | | |||||||    
T  29117274 ttatttatgtaatttattcagtttaatagcggaaatggatatccgcggatgcggataccgttaaatccgcatccgtatccattaattagcgggtagttaa 29117373  T
Q  675 aaaatccgtttattttattcatggatatccattaagatatctgctccg 722  Q
    || ||||||||||||||| |||| ||||  |||||| ||| |||||||    
T  29117374 aatatccgtttattttatccatgaatatttattaagttatttgctccg 29117421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 338 - 437
Target Start/End: Original strand, 43624430 - 43624531
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaa--cataaataaagtcccttacatttaataaaaataaagttctttgattt 435  Q
    |||||| | |||| |||||||||| |||||| |||||||||| || |||||  ||| ||||||| |||||||||||||||||||||||||||||||||||    
T  43624430 cataatttccatatattacaataacaacaaagatcattgactaaaaaaaaaaccattaataaagccccttacatttaataaaaataaagttctttgattt 43624529  T
Q  436 aa 437  Q
    ||    
T  43624530 aa 43624531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 512 - 764
Target Start/End: Original strand, 33340804 - 33341056
Alignment:
Q  512 gtaataactgataacactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtg 611  Q
    ||||||||| ||||||||||||| ||  ||| | ||| |||| |||| |||| |||||| | ||||||||| || |||||||  ||||||||  | | ||    
T  33340804 gtaataactaataacactcacaacactgaggttttttgcttaggaagttgaaaggtattaatgttatttatatattttactctatttaatagtggatatg 33340903  T
Q  612 gatatccgcagctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaaga 711  Q
    |||||| || | |    |||||||||||||  ||||| ||| |||||||||  || ||||||||| ||||||||||||||| ||| ||| || ||||||     
T  33340904 gatatctgcgggtacatataccattaaatctgcatccgtatccattaattagtaggtagttaaaatatccgtttattttatccatagatgtctattaagg 33341003  T
Q  712 tatctgctccgttcccgtgatggattttatccgtggatatccacgggtgtgga 764  Q
    |||||  | |||  || | | |||||||||||| |||||||||||| ||||||    
T  33341004 tatctatttcgtgtccataacggattttatccgcggatatccacggatgtgga 33341056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 579 - 741
Target Start/End: Complemental strand, 17120141 - 17119979
Alignment:
Q  579 ttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaa 678  Q
    |||||||||||||||||||||||| | ||| |||||||||||   || |||| ||||||| ||| ||| | ||| ||||||||| | ||||||||||| |    
T  17120141 ttatgtaatttactcggtttaatatcgggtatggatatccgcgcgtgcggatgccattaagtccgcattcgtatccattaattagcggatagttaaaata 17120042  T
Q  679 tccgtttattttattcatggatatccattaagatatctgctccgttcccgtgatggattttat 741  Q
    | ||||||||| || || | ||||| ||||||  ||| |||| || |||||| ||||||||||    
T  17120041 ttcgtttatttcatccacgaatatctattaaggcatccgctctgtgcccgtggtggattttat 17119979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 12624930 - 12624862
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||| |||||| |  ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12624930 cctatatgtaagcacccatttgattttatttttgtccttaaatgtaaactccttttcaaattactagat 12624862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 338 - 517
Target Start/End: Complemental strand, 17120396 - 17120227
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaa--ataaagttctttgattt 435  Q
    |||||||| ||||||||||||||| |||||  |||||||||||||||||||| |||||||||| | ||  |||||| ||||  |||||           |    
T  17120396 cataatatccatacattacaataacaacaatgatcattgactcaacaaaaacctaaataaagttctttg-atttaacaaaagcataaa-----------t 17120309  T
Q  436 aaagctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaata 517  Q
    |||||||||||||||||||| |||||||  || |   ||||||||||| |||||||| |||||||||||||| |||||||||    
T  17120308 aaagctcatcatattcaacaaaaacaaagtttcttggtcaacaatcccgaccactttcacttccttttaaaggagcgtaata 17120227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 206 - 275
Target Start/End: Complemental strand, 51788003 - 51787934
Alignment:
Q  206 ctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagatac 275  Q
    ||||||||||| |||  ||||||||||||||||||||||||| ||||| |||||| ||||||||||||||    
T  51788003 ctatatctaagtatccatttgattttatttttgtccttaaatataaactcctttttaaattactagatac 51787934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 206 - 273
Target Start/End: Complemental strand, 24073000 - 24072933
Alignment:
Q  206 ctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||| |  ||||||||||||||||||| ||||| ||||| |||||||||||||||||||    
T  24073000 ctatatctaagcacccatttgattttatttttgtccataaatataaaccccttttcaaattactagat 24072933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 204 - 275
Target Start/End: Complemental strand, 26203366 - 26203295
Alignment:
Q  204 tcctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagatac 275  Q
    |||||||| ||| ||||  |||||||||| |||||||||||||||||||| ||||||||||||| |||||||    
T  26203366 tcctatatgtaatcatccatttgattttacttttgtccttaaatgtaaactccttttcaaattattagatac 26203295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 40411203 - 40411282
Alignment:
Q  195 ctccctccatcc-tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||| ||| ||||| ||||||||  ||||||||||||||||||| ||| ||||||| |||||||||||||||||||    
T  40411203 ctccctccgtccatatatttaagcatccatttgattttatttttgtccctaattgtaaactccttttcaaattactagat 40411282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 223 - 273
Target Start/End: Complemental strand, 22651680 - 22651630
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  22651680 tttgattttatttttatccttaaatgtaaactccttttcaaattactagat 22651630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 373 - 435
Target Start/End: Complemental strand, 36464908 - 36464847
Alignment:
Q  373 attgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgattt 435  Q
    |||||||||| |||||||||||||| || ||||||||||||||||||||||||| ||||||||    
T  36464908 attgactcaataaaaacataaataa-gttccttacatttaataaaaataaagttatttgattt 36464847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 566 - 715
Target Start/End: Original strand, 23627123 - 23627272
Alignment:
Q  566 gtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattcattaattaaca 665  Q
    ||||| |||||||||||||||||||||||||||| ||||| || || |||| ||  | ||  |||||||||| ||   |||   ||| ||||||||| ||    
T  23627123 gtattaaggttatttatgtaatttactcggtttagtagcaagtatgcatattcgaggatgcagataccattatatatgcatatgtatccattaattagca 23627222  T
Q  666 gatagttaaaaaatccgtttattttattcatggatatccattaagatatc 715  Q
    | ||||||||| || |||||||||||| |||| || ||||||||| ||||    
T  23627223 ggtagttaaaatattcgtttattttatccatgtatttccattaaggtatc 23627272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 206 - 275
Target Start/End: Complemental strand, 38136583 - 38136514
Alignment:
Q  206 ctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagatac 275  Q
    |||||| ||||||||  ||||| ||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  38136583 ctatatttaagcatccatttgactttatttttatccataaatgtaaactccttttcaaattactagatac 38136514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 5168213 - 5168145
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||| || ||||||||||||||||||  ||||||||||| | |||||| ||||||||||    
T  5168213 cctatatctaagcaccaatttgattttatttttgtctctaaatgtaaacccgttttcatattactagat 5168145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 31936965 - 31937033
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||||  ||| | ||||||||||||| ||||||||||  |||||||||||||||||||    
T  31936965 cctatatctaagcatctatttaactttatttttgtccctaaatgtaaatcccttttcaaattactagat 31937033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 206 - 273
Target Start/End: Complemental strand, 5536717 - 5536650
Alignment:
Q  206 ctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||| | |  ||||||||||||||||||| |||||||||||  ||||||||||||||||||    
T  5536717 ctatatctaagtacccatttgattttatttttgtccctaaatgtaaacctcttttcaaattactagat 5536650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 223 - 273
Target Start/End: Complemental strand, 31917591 - 31917541
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||| ||||||||||||||| | |||||||||||||||||    
T  31917591 tttgattttatttttatccttaaatgtaaaccctttttcaaattactagat 31917541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 223 - 273
Target Start/End: Original strand, 33246387 - 33246437
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||||||| ||||||||||| | |||||||||||||||||    
T  33246387 tttgattttatttttgtccctaaatgtaaactctttttcaaattactagat 33246437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 205 - 275
Target Start/End: Complemental strand, 43801042 - 43800972
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagatac 275  Q
    |||||||||||||  |  ||||| ||||||||||||| ||||||||||| || ||||||||||||||||||    
T  43801042 cctatatctaagcccccatttgactttatttttgtccctaaatgtaaaccccctttcaaattactagatac 43800972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 207 - 275
Target Start/End: Original strand, 54701167 - 54701235
Alignment:
Q  207 tatatctaagca-tcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagatac 275  Q
    |||||||||||| ||| ||||| ||||||||||||| |||||||||||  ||||||||||||||||||||    
T  54701167 tatatctaagcactca-tttgactttatttttgtccataaatgtaaacctcttttcaaattactagatac 54701235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 20116685 - 20116617
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||| | |||||||||| | ||||||| | ||| ||||| |||||||||||||||||||    
T  20116685 cctatatctaagcacccgtttgattttgtctttgtcccttaatataaaccccttttcaaattactagat 20116617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 273
Target Start/End: Complemental strand, 25477466 - 25477391
Alignment:
Q  198 cctccatcctatatctaagca-tcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||| ||   |||||||||||||||||    
T  25477466 cctccgtcctatatctaagcactca-tttgattttatttttgtccctaaatgtatacttattttcaaattactagat 25477391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 442 - 517
Target Start/End: Original strand, 33340710 - 33340786
Alignment:
Q  442 catcatattcaacataaacaaaactt-ttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaata 517  Q
    |||||||||||||| |||||||  || ||||||||||||| ||  ||||||| |||||||||||||| |||||||||    
T  33340710 catcatattcaacaaaaacaaagtttcttgcttcaacaattccggccactttcacttccttttaaaggagcgtaata 33340786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 267
Target Start/End: Original strand, 39813847 - 39813891
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaatta 267  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||    
T  39813847 tttgattttatttttgtccctaaatgtaaactccttttcaaatta 39813891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 43509308 - 43509248
Alignment:
Q  213 taagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||  ||||| ||||||||||||| ||||||||||| ||||||||||||| |||||    
T  43509308 taagcatccatttgactttatttttgtccctaaatgtaaactccttttcaaattattagat 43509248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 52226226 - 52226186
Alignment:
Q  233 tttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  52226226 tttttgtccttaaatgtaaacacattttcaaattactagat 52226186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 31486704 - 31486657
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattacta 270  Q
    ||||| |||||||||||| |||||||||||| ||||||||||||||||    
T  31486704 tttgactttatttttgtctttaaatgtaaaccccttttcaaattacta 31486657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 205 - 252
Target Start/End: Original strand, 45627959 - 45628006
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaa 252  Q
    ||||||||||||||||  ||||||||||||||||||||||||| ||||    
T  45627959 cctatatctaagcatctatttgattttatttttgtccttaaatataaa 45628006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 223 - 273
Target Start/End: Original strand, 37625013 - 37625063
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||||||| |||||||||||  |||||||||||| |||||    
T  37625013 tttgattttatttttgtccctaaatgtaaacctcttttcaaattattagat 37625063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 52198623 - 52198669
Alignment:
Q  229 tttatttttgtccttaaatgtaaacaccttttcaaattactagatac 275  Q
    |||| |||||||| ||||||||||| |||||||||||||||||||||    
T  52198623 tttagttttgtccctaaatgtaaaccccttttcaaattactagatac 52198669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 54359894 - 54359848
Alignment:
Q  227 attttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||| ||||||||||||  ||||||||||||||||||    
T  54359894 attttatttttgtctttaaatgtaaaccacttttcaaattactagat 54359848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 206 - 272
Target Start/End: Complemental strand, 54438743 - 54438677
Alignment:
Q  206 ctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactaga 272  Q
    |||||||||||||||  ||| ||||||||||||||| ||||||||||   |||||||||||| ||||    
T  54438743 ctatatctaagcatccattttattttatttttgtccctaaatgtaaatctcttttcaaattagtaga 54438677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 51918528 - 51918596
Alignment:
Q  207 tatatctaagcatcagtttgattttatttttgtccttaaatgtaa--acaccttttcaaattactagat 273  Q
    |||||||||||| |  ||||||||||||||||||| |||||||||  |  |||||||||||||||||||    
T  51918528 tatatctaagcacccatttgattttatttttgtccctaaatgtaattatcccttttcaaattactagat 51918596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 10602105 - 10602149
Alignment:
Q  229 tttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||| ||||||||||| |||||| ||||||||||||    
T  10602105 tttatttttgtccataaatgtaaactcctttttaaattactagat 10602149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 14602554 - 14602590
Alignment:
Q  237 tgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||||| |||||||||||||||||||    
T  14602554 tgtccttaaatgtaaaccccttttcaaattactagat 14602590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 19654661 - 19654601
Alignment:
Q  207 tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaatta 267  Q
    ||||||||||||||  ||||||||||||||  ||| ||||||||||| | |||||||||||    
T  19654661 tatatctaagcatccatttgattttattttcatccctaaatgtaaactctttttcaaatta 19654601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 20293982 - 20293914
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||||  ||||||||||||||| | | ||||||| ||| | ||||||||||| |||||    
T  20293982 cctatatctaagcatccatttgattttattttttttcataaatgtgaactcattttcaaattattagat 20293914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 31840329 - 31840261
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||| |||||||||   ||||| ||||||||||||| ||||| ||||| ||||||||||||| |||||    
T  31840329 cctatttctaagcattcatttgactttatttttgtccctaaatataaaccccttttcaaattattagat 31840261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 228 - 268
Target Start/End: Original strand, 50438208 - 50438248
Alignment:
Q  228 ttttatttttgtccttaaatgtaaacaccttttcaaattac 268  Q
    |||||||||||||| ||||||||||| ||||||||||||||    
T  50438208 ttttatttttgtccctaaatgtaaaccccttttcaaattac 50438248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 274
Target Start/End: Complemental strand, 3094550 - 3094499
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagata 274  Q
    ||||| ||||||||||| ||||||||||||| |||||| |||||| ||||||    
T  3094550 tttgactttatttttgtgcttaaatgtaaactcctttttaaattagtagata 3094499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 270
Target Start/End: Original strand, 41945666 - 41945709
Alignment:
Q  227 attttatttttgtccttaaatgtaaacaccttttcaaattacta 270  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||    
T  41945666 attttatttttgtccctaaatgtaaatcccttttcaaattacta 41945709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 253
Target Start/End: Complemental strand, 11792650 - 11792620
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaac 253  Q
    |||||||||||||||||||||||||||||||    
T  11792650 tttgattttatttttgtccttaaatgtaaac 11792620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 253
Target Start/End: Complemental strand, 11861317 - 11861287
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaac 253  Q
    |||||||||||||||||||||||||||||||    
T  11861317 tttgattttatttttgtccttaaatgtaaac 11861287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 13096436 - 13096482
Alignment:
Q  229 tttatttttgtccttaaatgtaaacaccttttcaaattactagatac 275  Q
    ||||||||| ||| |||||| |||| |||||||||||||||||||||    
T  13096436 tttatttttatccctaaatgcaaaccccttttcaaattactagatac 13096482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 253
Target Start/End: Original strand, 23611364 - 23611394
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaac 253  Q
    |||||||||||||||||||||||||||||||    
T  23611364 tttgattttatttttgtccttaaatgtaaac 23611394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 517
Target Start/End: Complemental strand, 36464831 - 36464749
Alignment:
Q  436 aaagctcatcatattcaacataaacaaaactt-ttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaata 517  Q
    |||||||||||||||||||| ||||||| |||  || ||||||||||||  ||||||| |||  ||||||||| || ||||||    
T  36464831 aaagctcatcatattcaacaaaaacaaagcttaatgtttcaacaatcccggccactttcactatcttttaaaggagtgtaata 36464749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 273
Target Start/End: Complemental strand, 5933117 - 5933052
Alignment:
Q  208 atatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||   ||||| ||||||||||||| ||||| ||||   ||||||||||||||||||    
T  5933117 atatctaagcattcatttgactttatttttgtccctaaatataaatttcttttcaaattactagat 5933052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 273
Target Start/End: Original strand, 39196907 - 39196972
Alignment:
Q  208 atatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||| |  ||||| ||||||||||||| ||||||||||    |||||||||||||||||    
T  39196907 atatctaagcacccatttgactttatttttgtccctaaatgtaaattatttttcaaattactagat 39196972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 40572021 - 40571921
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaa-cataaataaagtcccttacatttaataaaaataaagttctttgattta 436  Q
    ||||||||  ||| |||| || || |||||| ||| ||||||||| ||||| |||||||||||| |  ||||||||||| ||||||| |||||||| |||    
T  40572021 cataatatcgatagattataacaacaacaaagatccttgactcaataaaaaacataaataaagttcactacatttaatagaaataaa-ttctttgaatta 40571923  T
Q  437 aa 438  Q
    ||    
T  40571922 aa 40571921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 189; Significance: 1e-102; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 341 - 760
Target Start/End: Original strand, 10788495 - 10788928
Alignment:
Q  341 aatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa--- 437  Q
    ||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||       
T  10788495 aatattcatacattacaataacaacaaagatcattgagtcaacaaaaacataaataaagtctcttacatataataaaaataaatttctttgatttaacaa 10788594  T
Q  438 ------------agctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactgataa 525  Q
                || ||||||||||||||| ||||||| || |||||| |||||||||||||||||| |||| ||||||||| |||||||||| ||||||    
T  10788595 aagcataagtaaagttcatcatattcaacaaaaacaaagctcttgcttaaacaatcccaaccactttcactttcttttaaaggagcgtaataattgataa 10788694  T
Q  526 cactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctg 625  Q
    || |||||||||||| | |||||||||| |||| |||||| |||||||||||||||||||||||| | |||||||||||   | ||||| ||| | | ||    
T  10788695 caatcacaatacctaaggtgttttcttaggaagttgaatgatattgaggttatttatgtaatttagttggtttaatagcgaatatggatctcctcgggtg 10788794  T
Q  626 tggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttc 725  Q
    ||||||| |||||||||||||   ||| ||||||||| ||| ||||| |||||| |||||||||||| ||||||||||||||||| |||| ||||||| |    
T  10788795 tggatactattaaatccacatttgtatccattaattagcaggtagtt-aaaaattcgtttattttatccatggatatccattaaggtatccgctccgtgc 10788893  T
Q  726 ccgtgatggattttatccgtggatatccacgggtg 760  Q
    |||||  | |||||||||| |||||||||||||||    
T  10788894 ccgtggcgaattttatccgcggatatccacgggtg 10788928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 338 - 692
Target Start/End: Original strand, 8576766 - 8577123
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||  ||||||||||||||||||| ||||||||||    
T  8576766 cataatattcatacattacaataacaacaaagatcattgactcaacaaaaacataaataaagtctcttcaatttaataaaaataaagttatttgatttaa 8576865  T
Q  438 ---------------agctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactga 522  Q
                   |||||||||||||||||| |||||||      ||||||||||      ||||||| |||||||||||||| ||||||||||||||    
T  8576866 caaaaacataagtaaagctcatcatattcaacaaaaacaaa------gcttcaacaa------ccactttcacttccttttaaaggagcgtaataactga 8576953  T
Q  523 taacactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcag 622  Q
    |||||||||||||||||| | |||||||||| |||| |||||| |||||||||||||||| ||||||||||||||||||||| ||| ||||||||| | |    
T  8576954 taacactcacaatacctaaggtgttttcttaggaagttgaatgatattgaggttatttatataatttactcggtttaatagcgggtatggatatccacgg 8577053  T
Q  623 ctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttat 692  Q
     ||||||||||||||||||  ||||  ||| ||||||||||| | | ||||||||| |||||||||||||    
T  8577054 gtgtggataccattaaatctgcatctgtatccattaattaacggttggttaaaaaaaccgtttattttat 8577123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 338 - 757
Target Start/End: Complemental strand, 35167400 - 35166967
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    |||||||| | ||||||||||||| |||||| |||||||||| ||||||||||||||||||||| || ||||||||||||||||| ||| ||||||||||    
T  35167400 cataatatccgtacattacaataacaacaaagatcattgacttaacaaaaacataaataaagtctctcacatttaataaaaataatgttatttgatttaa 35167301  T
Q  438 ---------------agctcatcatattcaacataaacaaaactt-ttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactg 521  Q
                   |  ||||||||||||||| ||||||| ||| || ||||||||||| || ||||||| |||||||||||||| ||||||||||||     
T  35167300 caaaagttcaagtaaaagtcatcatattcaacaaaaacaaagcttcttacttcaacaatcgcatccactttcacttccttttaaaggagcgtaataacta 35167201  T
Q  522 ataacactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgca 621  Q
    |||| ||||| |||||| | | | ||| |||| |||| |||| | || | |||||| ||||||||||||||| ||||| |||| ||| |||||||||||     
T  35167200 ataatactcataataccgacgatttttgcttaggaagttgaaagttaat-aggttacttatgtaatttactcagtttagtagcgggtatggatatccgcg 35167102  T
Q  622 gctgtggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctcc 721  Q
    | ||  ||||||||||||||||||||| |||  |||||||| | | ||||||||| ||||||||||||||| |||||||||| |||||| |||| |||      
T  35167101 g-tgcagataccattaaatccacatccgtatcaattaattagcgggtagttaaaatatccgtttattttatccatggatatctattaaggtatccgcttt 35167003  T
Q  722 gttcccgtgatggattttatccgtggatatccacgg 757  Q
    ||  | ||| |||||||||||||  |||||| ||||    
T  35167002 gtgtctgtggtggattttatccgctgatatctacgg 35166967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 546 - 756
Target Start/End: Original strand, 7622541 - 7622751
Alignment:
Q  546 ttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccaca 645  Q
    ||||||||  ||| |||||| |||| | ||||||||  ||||||||||||||||||||| ||| ||||||||||| | ||||||||||||||||||| ||    
T  7622541 ttttcttagaaagttgaatgatattaatgttatttacttaatttactcggtttaatagcgggtatggatatccgcgggtgtggataccattaaatccgca 7622640  T
Q  646 tccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgtgatggattttatccgt 745  Q
    ||| ||| ||||||||| | | ||  ||||||||||||||||||||| ||||||||||||||||| |||| ||||||   |||||  ||||||||||||     
T  7622641 tccgtatccattaattagcgggtaaataaaaaatccgtttattttatccatggatatccattaaggtatccgctccgcgtccgtggcggattttatccgc 7622740  T
Q  746 ggatatccacg 756  Q
    |||||||||||    
T  7622741 ggatatccacg 7622751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 435 - 760
Target Start/End: Complemental strand, 642039 - 641707
Alignment:
Q  435 taaagctcatcatattcaacataaacaaaactt-ttgcttcaacaatcccaaccacttttacttccttttaaagtagcgtaataactgataa-------- 525  Q
    |||| |||||||||||||||| ||||||| ||| |||| |||||||| ||||||| ||  ||||||||| |||| ||| ||||||||  | |            
T  642039 taaaactcatcatattcaacaaaaacaaagcttcttgcgtcaacaattccaaccatttccacttccttt-aaaggagcataataactacttaactagtag 641941  T
Q  526 cactcacaatacctaggctgttttcttaagaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctg 625  Q
    ||||| ||||||| ||| | || ||||| |||| |||| | |||| |||||||||||||||||||||| |||||||||| | | ||||||||||| | ||    
T  641940 cactcgcaataccgagggttttctcttaggaagttgaaagttatt-aggttatttatgtaatttactcagtttaatagcggatatggatatccgcggatg 641842  T
Q  626 tggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttc 725  Q
     || ||||||||||||| |||   ||| ||||||||| | ||||||||||| ||||||||||||||| |||||||||||||||| ||||| |||||||      
T  641841 cggttaccattaaatcctcatatgtatccattaattagcggatagttaaaatatccgtttattttatccatggatatccattaaaatatccgctccgtgt 641742  T
Q  726 ccgtgatggattttatccgtggatatccacgggtg 760  Q
    ||||| || |||||||||| | ||||||| |||||    
T  641741 ccgtggtgaattttatccgcgaatatccaggggtg 641707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 555 - 760
Target Start/End: Complemental strand, 10408824 - 10408619
Alignment:
Q  555 gaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattc 654  Q
    |||| ||||||||||| | ||||||||||||||||||||||||||||||  ||| |||||||| || | || |||| ||| ||||||  ||||  |||      
T  10408824 gaagttgaatggtattaacgttatttatgtaatttactcggtttaatagtgggtatggatatctgcggatgcggatgccaataaatctgcatctgtatct 10408725  T
Q  655 attaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgtgatggattttatccgtggatatcca 754  Q
    | || ||| | | ||||| ||| ||||||||||||||| |||| |||||||||||| |||| |||||||| |||||  |||||||||| | |||||||||    
T  10408724 actatttagcgggtagttgaaatatccgtttattttatccatgaatatccattaaggtatccgctccgtttccgtggcggattttatctgcggatatcca 10408625  T
Q  755 cgggtg 760  Q
    ||||||    
T  10408624 cgggtg 10408619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 338 - 437
Target Start/End: Original strand, 7622380 - 7622474
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    |||||||| |||||||||||||||     || |||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||    
T  7622380 cataatatccatacattacaataa-----aagatcattgactcaacaaaaacataaataatgtcctttacatttaataaagataaagttctttgatttaa 7622474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 341 - 418
Target Start/End: Complemental strand, 642171 - 642094
Alignment:
Q  341 aatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaa 418  Q
    ||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||  |||||||||||||||    
T  642171 aatattcatacattacaataacaacaaagatcattgacttaacaaaaacataaataaagtcttttacatttaataaaa 642094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 338 - 405
Target Start/End: Complemental strand, 7245596 - 7245529
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtccctt 405  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||    
T  7245596 cataatattcatacattacaataacaacaaagatcattgactcaacaaaaacataaataaagttcctt 7245529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 338 - 437
Target Start/End: Complemental strand, 34433312 - 34433213
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    ||||||||  |||||||||||||| |||||| |||||||||| ||||||||  ||||||||||| ||||||||||||| |||||||||| ||| ||||||    
T  34433312 cataatatctatacattacaataacaacaaagatcattgacttaacaaaaatgtaaataaagtctcttacatttaatacaaataaagttatttaatttaa 34433213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 575 - 723
Target Start/End: Original strand, 28582432 - 28582580
Alignment:
Q  575 ttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattcattaattaacagatagttaa 674  Q
    |||||||||||||||| |  ||||||||||  || |||||||| |  | ||||||||| |||||||||  ||   ||| || |||||||| | |||||||    
T  28582432 ttatttatgtaatttattttgtttaatagcgagtatggatatctgagggtgtggatactattaaatccgtatttgtatccactaattaacgggtagttaa 28582531  T
Q  675 aaaatccgtttattttattcatggatatccattaagatatctgctccgt 723  Q
    || ||||||||||||||| ||||||||||||| ||| |||| |||||||    
T  28582532 aatatccgtttattttatccatggatatccatcaaggtatccgctccgt 28582580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 338 - 437
Target Start/End: Original strand, 28582157 - 28582255
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    |||||||| |||| |||| ||||  |||||||||||||||||| | ||||||||||||||||   ||||||||||||||| ||||| |||||||||||||    
T  28582157 cataatatccata-attaaaatagcaacaaaaatcattgactcgataaaaacataaataaagcttcttacatttaataaatataaatttctttgatttaa 28582255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 6791610 - 6791542
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||| |  |||||||||||||||||| |||||||||||| ||||||||| |||||||||    
T  6791610 cctatatctaagcacccatttgattttatttttgtctttaaatgtaaaccccttttcaacttactagat 6791542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 19839165 - 19839097
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||| |||||| |  ||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  19839165 cctatatgtaagcacccatttgattttatttttgtccctaaatgtaaactccttttcaaattactagat 19839097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 339 - 437
Target Start/End: Complemental strand, 10409076 - 10408978
Alignment:
Q  339 ataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatttaa 437  Q
    ||||||||||| ||||| ||||| |||| | |||||||||| ||||||||||||| |||||  |||||||||| ||| |  |||| |||||||||||||    
T  10409076 ataatattcatgcattataataacaacatagatcattgacttaacaaaaacataactaaagctccttacatttgatatatttaaacttctttgatttaa 10408978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 11303091 - 11303023
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||| | |  |||||||||||||||||||||||||||||||  |||||||||| |||||||    
T  11303091 cctatatctaagaacccatttgattttatttttgtccttaaatgtaaacttcttttcaaataactagat 11303023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 204 - 273
Target Start/End: Complemental strand, 30249096 - 30249027
Alignment:
Q  204 tcctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||| |  ||||| ||||||||||||| |||||||||||   |||||||||||||||||    
T  30249096 tcctatatctaagcacccatttgactttatttttgtccctaaatgtaaacctattttcaaattactagat 30249027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 206 - 273
Target Start/End: Original strand, 28238189 - 28238254
Alignment:
Q  206 ctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||| |||||||||| |||  |||||||||||||||  | |||||||||||||||||    
T  28238189 ctatatctaagcatccgtttgattttcttt--gtccttaaatgtaaatcctttttcaaattactagat 28238254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 30465840 - 30465908
Alignment:
Q  205 cctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||| ||||  ||||| ||||||||||| | |||||||||||  ||||||||||||||||||    
T  30465840 cctatatctaaacatctatttgactttatttttgttcataaatgtaaacttcttttcaaattactagat 30465908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 223 - 273
Target Start/End: Original strand, 197339 - 197389
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||| |||||||||||||||||||||||||  ||||| ||||||||||||    
T  197339 tttgactttatttttgtccttaaatgtaaacttctttttaaattactagat 197389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 223 - 273
Target Start/End: Complemental strand, 16186786 - 16186736
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||| |||||||||||||| ||||| | |||||||||||||||||    
T  16186786 tttgattttacttttgtccttaaatataaaccctttttcaaattactagat 16186736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 223 - 273
Target Start/End: Original strand, 31945802 - 31945852
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||||||  |||||||||||  ||||||||||||||||||    
T  31945802 tttgattttatttttgtctctaaatgtaaacttcttttcaaattactagat 31945852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 1764047 - 1763979
Alignment:
Q  205 cctatatctaagca-tcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||||| ||| ||||||||||||||||||  ||||| ||||||||||| ||||||| |||||    
T  1764047 cctatatctaagcactca-tttgattttatttttgtctctaaatataaacacctttccaaattattagat 1763979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 440 - 480
Target Start/End: Original strand, 7622491 - 7622531
Alignment:
Q  440 ctcatcatattcaacataaacaaaacttttgcttcaacaat 480  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  7622491 ctcatcatattcaacaaaaacaaagcttttgcttcaacaat 7622531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 34513115 - 34513159
Alignment:
Q  229 tttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||| | ||||||||||| |||||||||||||||||||    
T  34513115 tttatttttgttcctaaatgtaaactccttttcaaattactagat 34513159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 253
Target Start/End: Original strand, 24068024 - 24068054
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaac 253  Q
    |||||||||||||||||||||||||||||||    
T  24068024 tttgattttatttttgtccttaaatgtaaac 24068054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 441 - 513
Target Start/End: Complemental strand, 10408959 - 10408886
Alignment:
Q  441 tcatcatattcaacataaacaaaacttttg-cttcaacaatcccaaccacttttacttccttttaaagtagcgt 513  Q
    |||||||||| |||||||| |||  ||||  |||||||||| ||||||||||| ||||||||||| || |||||    
T  10408959 tcatcatatttaacataaaaaaagtttttttcttcaacaattccaaccactttgacttccttttagaggagcgt 10408886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 381 - 434
Target Start/End: Complemental strand, 17930323 - 17930270
Alignment:
Q  381 aacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatt 434  Q
    |||||||| ||||||||||| | | |||||||| ||||| ||||||||||||||    
T  17930323 aacaaaaatataaataaagttcatgacatttaagaaaaacaaagttctttgatt 17930270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 94; Significance: 2e-45; HSPs: 2)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 562 - 755
Target Start/End: Complemental strand, 6821 - 6628
Alignment:
Q  562 aatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattcattaatt 661  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| || |||||| | | ||||||||||||||||||| ||||  ||| ||||||||    
T  6821 aatgatattgaggttatttatgtaatttactcggtttaatagcgggtatgaatatccacgggtgtggataccattaaatccgcatctgtatccattaatt 6722  T
Q  662 aacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgtgatggattttatccgtggatatccac 755  Q
    ||  | |||||| ||||||| |||||||||| ||||||||| |||||||||||  | ||||| ||||||| |||||||||||| | ||||||||    
T  6721 aatggttagttagaaaatccatttattttatccatggatattcattaagatattcgttccgtgcccgtgacggattttatccgcgaatatccac 6628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 338 - 505
Target Start/End: Complemental strand, 7002 - 6820
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatt--- 434  Q
    |||||||||||||  ||||||||| |||||| |||||||||||||||||||||||||| | |||| |||||| ||||||||||||| ||||||||||       
T  7002 cataatattcatattttacaataacaacaaagatcattgactcaacaaaaacataaatgaggtccattacatataataaaaataaaattctttgatttaa 6903  T
Q  435 ------------taaagctcatcatattcaacataaacaaaacttttgcttcaacaatcccaaccacttttacttccttttaa 505  Q
                ||||| |||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||    
T  6902 caaaaacataagtaaagttcatcatattcaacataaacgaagcttttgcttcaacaatcccaaccactttcacttccttttaa 6820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 87; Significance: 3e-41; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 555 - 757
Target Start/End: Original strand, 22222 - 22424
Alignment:
Q  555 gaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattc 654  Q
    |||| |||| || ||| ||| |||||| |||||| |||| ||||||||||||||| |||||||||| | || |||||||||||||||| ||||| ||| |    
T  22222 gaagttgaaaggcattaaggatatttacgtaattcactcagtttaatagcaggtgcggatatccgcgggtgcggataccattaaatccgcatccgtatcc 22321  T
Q  655 attaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgtgatggattttatccgtggatatcca 754  Q
    |||||||| | | ||||||||| |||| |||||||||| | ||||||||||||||| |||| |||||||  |||||  |||||||||||| |||||||||    
T  22322 attaattagcgggtagttaaaatatccatttattttatccgtggatatccattaaggtatccgctccgtgtccgtggcggattttatccgcggatatcca 22421  T
Q  755 cgg 757  Q
    |||    
T  22422 cgg 22424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 338 - 434
Target Start/End: Original strand, 22064 - 22160
Alignment:
Q  338 cataatattcatacattacaataataacaaaaatcattgactcaacaaaaacataaataaagtcccttacatttaataaaaataaagttctttgatt 434  Q
    ||||||||  ||| |||| || || |||||| ||| ||||||||| ||||||||||||||||| |  ||||||||||| ||||||| ||||||||||    
T  22064 cataatatcgatagattataacaacaacaaagatccttgactcaataaaaacataaataaagttcactacatttaatagaaataaaattctttgatt 22160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 79; Significance: 2e-36; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 555 - 757
Target Start/End: Complemental strand, 9153 - 8951
Alignment:
Q  555 gaaggtgaatggtattgaggttatttatgtaatttactcggtttaatagcaggtgtggatatccgcagctgtggataccattaaatccacatccatattc 654  Q
    |||| |||| || ||| ||| |||||| |||||| |||| |||||||| | |||| |||||||||| | || |||||||||||||||  ||||| ||| |    
T  9153 gaagttgaaaggcattaaggatatttacgtaattcactcagtttaataacgggtgcggatatccgcgggtgcggataccattaaatcagcatccgtatcc 9054  T
Q  655 attaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcccgtgatggattttatccgtggatatcca 754  Q
    |||||||||| | ||||||||| |||| |||||||||| | ||||||||||||||| |||| |||||||  |||||  |||||||||||| |||||||||    
T  9053 attaattaacgggtagttaaaatatccatttattttatccgtggatatccattaaggtatccgctccgtgtccgtggcggattttatccgcggatatcca 8954  T
Q  755 cgg 757  Q
    |||    
T  8953 cgg 8951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 46; Significance: 8e-17; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 627 - 760
Target Start/End: Original strand, 66858 - 66991
Alignment:
Q  627 ggataccattaaatccacatccatattcattaattaacagatagttaaaaaatccgtttattttattcatggatatccattaagatatctgctccgttcc 726  Q
    ||||||||||||||    |||||||||||| |||||   | ||| ||||| ||||||||||||||| ||||||||||||||||| |||| |||||||  |    
T  66858 ggataccattaaatatgtatccatattcatcaattagagggtagataaaatatccgtttattttatccatggatatccattaaggtatccgctccgtgtc 66957  T
Q  727 cgtgatggattttatccgtggatatccacgggtg 760  Q
     ||||  ||||||||||  ||||||| |||||||    
T  66958 tgtgacagattttatccacggatatctacgggtg 66991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 435 - 503
Target Start/End: Original strand, 66644 - 66713
Alignment:
Q  435 taaagctcatcatattcaacataaacaaaactt-ttgcttcaacaatcccaaccacttttacttcctttt 503  Q
    |||||||||||||||||| || ||||||||||| ||||||||||| |||| |||||||| ||| ||||||    
T  66644 taaagctcatcatattcaccaaaaacaaaacttcttgcttcaacagtcccgaccactttcactacctttt 66713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 363 - 400
Target Start/End: Original strand, 66582 - 66619
Alignment:
Q  363 aacaaaaatcattgactcaacaaaaacataaataaagt 400  Q
    |||||| |||||||||||||||||||||||||||||||    
T  66582 aacaaagatcattgactcaacaaaaacataaataaagt 66619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1091 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1091
Description:

Target: scaffold1091; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 1773 - 1852
Alignment:
Q  195 ctccctccatcc-tatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    |||||||||||| |||||||||||| |  ||||| ||||||||||||| | ||||||||| |||||||||||||||||||    
T  1773 ctccctccatccctatatctaagcacccatttgactttatttttgtccctcaatgtaaaccccttttcaaattactagat 1852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 204 - 274
Target Start/End: Complemental strand, 25934 - 25864
Alignment:
Q  204 tcctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagata 274  Q
    |||||||| |||||| |  |||||||||| |||||||| |||||||||||  |||||||||||||||||||    
T  25934 tcctatatgtaagcacctatttgattttagttttgtccctaaatgtaaacctcttttcaaattactagata 25864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 206 - 273
Target Start/End: Original strand, 38351 - 38416
Alignment:
Q  206 ctatatctaagcatcagtttgattttatttttgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||| |||||||||| |||  |||||||||||||||  | |||||||||||||||||    
T  38351 ctatatctaagcatccgtttgattttcttt--gtccttaaatgtaaatcctttttcaaattactagat 38416  T

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Target: scaffold0005 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 214824 - 214788
Alignment:
Q  237 tgtccttaaatgtaaacaccttttcaaattactagat 273  Q
    ||||||||||||||||| |||||||||||||||||||    
T  214824 tgtccttaaatgtaaaccccttttcaaattactagat 214788  T

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Target: scaffold0559 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 6725 - 6678
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaacaccttttcaaattacta 270  Q
    ||||| |||||||||||||||||||||||||  | |||||||||||||    
T  6725 tttgactttatttttgtccttaaatgtaaacctcatttcaaattacta 6678  T

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Target: scaffold0070 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 253
Target Start/End: Complemental strand, 12997 - 12967
Alignment:
Q  223 tttgattttatttttgtccttaaatgtaaac 253  Q
    |||||||||||||||||||||||||||||||    
T  12997 tttgattttatttttgtccttaaatgtaaac 12967  T

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Target: scaffold0041 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 340 - 377
Target Start/End: Original strand, 62490 - 62527
Alignment:
Q  340 taatattcatacattacaataataacaaaaatcattga 377  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  62490 taatattcatacattacaataacaacaaagatcattga 62527  T

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