View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3002_low_31 (Length: 464)

Name: NF3002_low_31
Description: NF3002
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3002_low_31
NF3002_low_31
[»] scaffold0018 (1 HSPs)
scaffold0018 (25-464)||(171561-171993)
[»] chr8 (35 HSPs)
chr8 (18-337)||(19949760-19950075)
chr8 (22-345)||(19954206-19954525)
chr8 (18-347)||(2469906-2470231)
chr8 (150-345)||(4544221-4544412)
chr8 (41-345)||(34517177-34517473)
chr8 (17-189)||(30778953-30779125)
chr8 (44-227)||(7145863-7146046)
chr8 (44-342)||(27236201-27236497)
chr8 (164-257)||(40125868-40125963)
chr8 (164-256)||(33416565-33416659)
chr8 (18-106)||(4544131-4544219)
chr8 (175-257)||(20072115-20072196)
chr8 (95-227)||(28237840-28237970)
chr8 (164-257)||(31449849-31449944)
chr8 (256-345)||(30777024-30777111)
chr8 (163-257)||(15875650-15875746)
chr8 (180-254)||(17953873-17953948)
chr8 (164-257)||(19166651-19166746)
chr8 (164-257)||(34118483-34118578)
chr8 (180-257)||(44925923-44926001)
chr8 (180-252)||(18876367-18876440)
chr8 (199-257)||(1807489-1807548)
chr8 (164-257)||(17025952-17026047)
chr8 (164-257)||(17556444-17556539)
chr8 (199-257)||(36683596-36683655)
chr8 (180-257)||(24090644-24090722)
chr8 (164-257)||(38182220-38182315)
chr8 (215-257)||(40130722-40130764)
chr8 (202-257)||(4238337-4238393)
chr8 (202-257)||(4243076-4243132)
chr8 (194-257)||(28559668-28559732)
chr8 (199-257)||(1910988-1911047)
chr8 (200-257)||(2965647-2965705)
chr8 (180-256)||(43302718-43302796)
chr8 (174-257)||(33616721-33616804)
[»] chr2 (26 HSPs)
chr2 (18-345)||(14104526-14104847)
chr2 (17-343)||(44957274-44957595)
chr2 (55-345)||(13060243-13060528)
chr2 (164-257)||(30650946-30651041)
chr2 (164-257)||(1934976-1935071)
chr2 (164-257)||(9180707-9180802)
chr2 (164-257)||(9189786-9189881)
chr2 (164-257)||(18344448-18344543)
chr2 (164-257)||(10160707-10160802)
chr2 (164-257)||(25478280-25478375)
chr2 (164-257)||(29677398-29677493)
chr2 (164-257)||(12796942-12797037)
chr2 (164-257)||(25497308-25497403)
chr2 (164-257)||(30658280-30658375)
chr2 (168-257)||(7737838-7737929)
chr2 (164-257)||(19892449-19892544)
chr2 (164-257)||(31326756-31326851)
chr2 (164-257)||(35638980-35639075)
chr2 (52-228)||(41558893-41559069)
chr2 (199-257)||(30631596-30631655)
chr2 (168-257)||(35601939-35602030)
chr2 (201-300)||(21523985-21524080)
chr2 (199-257)||(42926778-42926839)
chr2 (199-257)||(28603315-28603374)
chr2 (164-257)||(29677784-29677879)
chr2 (199-243)||(21523739-21523784)
[»] chr5 (39 HSPs)
chr5 (18-345)||(18265343-18265666)
chr5 (17-344)||(1286103-1286423)
chr5 (164-257)||(12501882-12501977)
chr5 (164-257)||(29167956-29168051)
chr5 (164-257)||(36937494-36937589)
chr5 (164-257)||(36942248-36942343)
chr5 (164-257)||(42001451-42001546)
chr5 (152-302)||(25215200-25215344)
chr5 (152-302)||(25279351-25279495)
chr5 (164-257)||(556712-556807)
chr5 (164-257)||(561484-561579)
chr5 (168-257)||(12103042-12103133)
chr5 (164-257)||(26667289-26667384)
chr5 (164-257)||(26938886-26938981)
chr5 (164-257)||(37248778-37248873)
chr5 (164-257)||(41996682-41996777)
chr5 (164-257)||(6514584-6514679)
chr5 (164-257)||(36423654-36423749)
chr5 (164-257)||(36428726-36428821)
chr5 (164-257)||(39523066-39523161)
chr5 (180-257)||(32461549-32461627)
chr5 (164-255)||(12045122-12045215)
chr5 (182-257)||(40147912-40147988)
chr5 (199-257)||(3665949-3666008)
chr5 (164-257)||(6155402-6155497)
chr5 (199-257)||(7451775-7451834)
chr5 (164-257)||(35679858-35679953)
chr5 (199-257)||(37652849-37652908)
chr5 (164-257)||(39518427-39518522)
chr5 (164-257)||(41587143-41587238)
chr5 (164-252)||(10759803-10759893)
chr5 (164-256)||(12041915-12042009)
chr5 (164-257)||(12102814-12102909)
chr5 (199-257)||(20181082-20181141)
chr5 (37-90)||(25215100-25215153)
chr5 (37-90)||(25279251-25279304)
chr5 (174-257)||(7805089-7805172)
chr5 (174-257)||(13582684-13582767)
chr5 (174-257)||(24435863-24435946)
[»] chr4 (35 HSPs)
chr4 (22-331)||(20513055-20513359)
chr4 (17-343)||(33722759-33723077)
chr4 (22-345)||(55081545-55081856)
chr4 (38-344)||(16595798-16596095)
chr4 (17-343)||(15020304-15020625)
chr4 (90-340)||(40684742-40684986)
chr4 (96-256)||(2575172-2575332)
chr4 (164-257)||(31273538-31273633)
chr4 (85-334)||(39991783-39992027)
chr4 (164-257)||(16421046-16421141)
chr4 (164-257)||(31765903-31765998)
chr4 (164-257)||(5271402-5271497)
chr4 (168-257)||(37264551-37264642)
chr4 (180-257)||(12823895-12823973)
chr4 (180-257)||(13521992-13522070)
chr4 (167-257)||(31269051-31269143)
chr4 (164-254)||(37259860-37259952)
chr4 (73-229)||(9931370-9931524)
chr4 (199-257)||(42758774-42758833)
chr4 (163-252)||(55251741-55251832)
chr4 (164-257)||(5928202-5928297)
chr4 (168-257)||(8030463-8030554)
chr4 (164-257)||(8693728-8693823)
chr4 (164-257)||(31729370-31729465)
chr4 (200-257)||(13059427-13059485)
chr4 (180-252)||(16953107-16953180)
chr4 (180-257)||(32082091-32082168)
chr4 (38-93)||(2574386-2574441)
chr4 (164-257)||(19101994-19102089)
chr4 (180-257)||(12874556-12874634)
chr4 (199-256)||(33468992-33469050)
chr4 (180-257)||(51697934-51698012)
chr4 (205-257)||(51697019-51697072)
chr4 (174-257)||(653061-653144)
chr4 (199-254)||(19106639-19106695)
[»] chr6 (27 HSPs)
chr6 (17-345)||(35129564-35129886)
chr6 (17-341)||(32814900-32815220)
chr6 (17-228)||(14775631-14775841)
chr6 (101-344)||(14041626-14041863)
chr6 (44-153)||(5495923-5496032)
chr6 (35-228)||(29610784-29610964)
chr6 (164-254)||(16836139-16836231)
chr6 (164-257)||(11570732-11570827)
chr6 (164-257)||(21309048-21309143)
chr6 (68-228)||(32551407-32551567)
chr6 (164-257)||(6407843-6407938)
chr6 (164-257)||(12688988-12689083)
chr6 (180-257)||(33687603-33687681)
chr6 (263-344)||(14775533-14775613)
chr6 (279-343)||(7499228-7499291)
chr6 (164-254)||(17964542-17964634)
chr6 (164-257)||(2700089-2700184)
chr6 (390-448)||(31035277-31035337)
chr6 (203-257)||(19674330-19674385)
chr6 (390-453)||(31045474-31045539)
chr6 (306-343)||(29610978-29611015)
chr6 (164-257)||(29892244-29892339)
chr6 (164-257)||(24589147-24589242)
chr6 (180-257)||(8747799-8747877)
chr6 (180-256)||(11614092-11614169)
chr6 (174-257)||(19478166-19478249)
chr6 (360-396)||(31045636-31045672)
[»] chr1 (34 HSPs)
chr1 (59-343)||(33380800-33381080)
chr1 (18-343)||(27761678-27761996)
chr1 (17-343)||(23193060-23193381)
chr1 (17-338)||(36724650-36724966)
chr1 (17-345)||(12906089-12906411)
chr1 (17-343)||(31063893-31064213)
chr1 (45-345)||(2493685-2493978)
chr1 (44-341)||(24159663-24159954)
chr1 (17-256)||(25661660-25661899)
chr1 (18-243)||(28857901-28858126)
chr1 (17-336)||(32987185-32987499)
chr1 (163-257)||(26927704-26927800)
chr1 (18-79)||(24159659-24159720)
chr1 (164-257)||(19798996-19799091)
chr1 (164-252)||(51041446-51041535)
chr1 (180-256)||(33301180-33301257)
chr1 (164-257)||(47451208-47451303)
chr1 (164-257)||(47455369-47455464)
chr1 (168-257)||(23192805-23192895)
chr1 (194-257)||(12260013-12260077)
chr1 (164-257)||(38620710-38620804)
chr1 (199-252)||(18784568-18784622)
chr1 (202-257)||(3094131-3094187)
chr1 (199-257)||(39588386-39588445)
chr1 (203-257)||(40165997-40166052)
chr1 (216-257)||(25855188-25855229)
chr1 (311-343)||(28858157-28858189)
chr1 (199-257)||(10135473-10135532)
chr1 (164-257)||(16649596-16649690)
chr1 (162-229)||(23489500-23489567)
chr1 (127-226)||(43242748-43242846)
chr1 (164-243)||(8137970-8138051)
chr1 (130-187)||(19309511-19309568)
chr1 (174-257)||(39747159-39747242)
[»] chr3 (37 HSPs)
chr3 (17-341)||(48435666-48435983)
chr3 (20-344)||(16982929-16983246)
chr3 (162-345)||(48432344-48432521)
chr3 (44-337)||(12156345-12156633)
chr3 (171-343)||(4662120-4662288)
chr3 (17-156)||(48432138-48432277)
chr3 (164-255)||(32474663-32474756)
chr3 (164-257)||(3672601-3672696)
chr3 (164-257)||(3692633-3692728)
chr3 (164-257)||(23666106-23666201)
chr3 (164-257)||(24038354-24038449)
chr3 (164-257)||(39775711-39775806)
chr3 (78-302)||(21100041-21100260)
chr3 (164-257)||(758351-758446)
chr3 (164-257)||(7571201-7571296)
chr3 (164-257)||(8883185-8883280)
chr3 (164-257)||(20520069-20520164)
chr3 (164-260)||(12971616-12971714)
chr3 (199-257)||(3419010-3419069)
chr3 (180-257)||(18467240-18467318)
chr3 (164-255)||(14438678-14438771)
chr3 (35-342)||(28243377-28243665)
chr3 (164-242)||(18472037-18472117)
chr3 (164-242)||(23661447-23661527)
chr3 (164-257)||(3033659-3033754)
chr3 (164-257)||(3657223-3657318)
chr3 (17-146)||(4662286-4662423)
chr3 (164-257)||(8069695-8069789)
chr3 (180-257)||(12965873-12965951)
chr3 (164-257)||(55431330-55431425)
chr3 (200-257)||(12112661-12112719)
chr3 (164-256)||(49971407-49971501)
chr3 (164-254)||(29350258-29350350)
chr3 (164-249)||(27708959-27709046)
chr3 (180-257)||(8887945-8888023)
chr3 (200-252)||(28125136-28125189)
chr3 (201-257)||(25726815-25726871)
[»] chr7 (25 HSPs)
chr7 (85-343)||(6898262-6898514)
chr7 (45-343)||(29478020-29478314)
chr7 (17-211)||(25832200-25832394)
chr7 (42-345)||(23616244-23616546)
chr7 (17-341)||(20130170-20130493)
chr7 (63-327)||(1289214-1289474)
chr7 (164-257)||(26341216-26341311)
chr7 (164-257)||(4579525-4579620)
chr7 (164-257)||(23866085-23866180)
chr7 (180-257)||(9650967-9651045)
chr7 (164-257)||(4930250-4930345)
chr7 (164-257)||(23246916-23247011)
chr7 (199-257)||(8076067-8076126)
chr7 (164-257)||(8268310-8268405)
chr7 (164-257)||(13314219-13314314)
chr7 (164-257)||(44510660-44510755)
chr7 (18-62)||(6898239-6898283)
chr7 (199-257)||(42627216-42627275)
chr7 (164-257)||(44423120-44423215)
chr7 (165-257)||(27238259-27238353)
chr7 (207-252)||(30256876-30256922)
chr7 (37-106)||(4338904-4338972)
chr7 (182-257)||(3357634-3357710)
chr7 (182-257)||(29150951-29151027)
chr7 (37-106)||(4334671-4334739)
[»] scaffold0002 (2 HSPs)
scaffold0002 (164-257)||(4091-4186)
scaffold0002 (164-243)||(443928-444007)
[»] scaffold0182 (1 HSPs)
scaffold0182 (164-257)||(9870-9965)
[»] scaffold0352 (1 HSPs)
scaffold0352 (164-257)||(7121-7216)
[»] scaffold0057 (1 HSPs)
scaffold0057 (164-257)||(35651-35746)
[»] scaffold0012 (1 HSPs)
scaffold0012 (164-257)||(166069-166164)
[»] scaffold2020 (1 HSPs)
scaffold2020 (164-252)||(393-483)
[»] scaffold0009 (1 HSPs)
scaffold0009 (164-252)||(165012-165102)
[»] scaffold0054 (1 HSPs)
scaffold0054 (164-257)||(25416-25511)
[»] scaffold0008 (1 HSPs)
scaffold0008 (164-257)||(255834-255929)
[»] scaffold0346 (1 HSPs)
scaffold0346 (37-93)||(11369-11424)
[»] scaffold0011 (1 HSPs)
scaffold0011 (174-257)||(1583-1666)


Alignment Details
Target: scaffold0018 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 25 - 464
Target Start/End: Original strand, 171561 - 171993
Alignment:
Q  25 ataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattggaatgtgt 124  Q
    ||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||    
T  171561 ataagactggtcctagtaccatataagagtgatcttagtaccataatagagtggtatcaataccatattggagtgatcttagaaccatattggaaggtgt 171660  T
Q  125 atttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgcttgcacaat 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |  ||||||||||||||||||||||||||||||||    
T  171661 atttctagaacagatcctatagtgcaataggattcttatacagttgtagttgggctgttttatcct-aggacgtcgtggttgatagtctgcttgcacaat 171759  T
Q  225 tttgggcaatgccacgaaatgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttttaactaat 324  Q
    ||| |||| |||||||||| |||||||    |||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  171760 tttaggcagtgccacgaaacgtcttaa----agagagcgacctagtctgcgactcagcctagtaatctcttcgatgagagaaaaaatatttttaactaat 171855  T
Q  325 tttgactattgttccaacaatctcttnnnnnnnnncaattcctatgaattgtcaaaatattcatataaaaatttaagtgtgtctcggtcctctgttgtag 424  Q
    ||||||||||||| | | | ||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  171856 tttgactattgtt-cgagagtctctt-aaataaaacaattcctatgaattgtcaaaatattcatataaaaatttaagtgtgtctcggtcctctgttgtag 171953  T
Q  425 gcctttgttggtagaaattcatatctttttcggtaattct 464  Q
    |||||||| |||||||| ||||||||||| || |||||||    
T  171954 gcctttgtcggtagaaactcatatcttttgcgataattct 171993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 227; Significance: 1e-125; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 18 - 337
Target Start/End: Complemental strand, 19950075 - 19949760
Alignment:
Q  18 acaccatataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattgg 117  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19950075 acaccatataagactggtcctagtatcatataagagtggtcttagtaccataatagagtggtatcaataccatattggagtggtcttagaaccatattgg 19949976  T
Q  118 aatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgctt 217  Q
    |  |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| || ||||||| |||||||||||||||||    
T  19949975 atggtgtatttctagaacagatcctatagtgcaataggattcttatacaattgcagctgagctgttttatcctgaggacgtcatggttgatagtctgctt 19949876  T
Q  218 gcacaattttgggcaatgccacgaaatgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatattttt 317  Q
    || |||||||||||| ||||||||||  |||||||||||| || |    ||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  19949875 gctcaattttgggcagtgccacgaaacttcttaaagagagcgacg----tagtccgtgactcagcctagtaatctcttcggtgacagaaaaaatattttt 19949780  T
Q  318 aactaattttgactattgtt 337  Q
    ||||||||||||||| ||||    
T  19949779 aactaattttgactactgtt 19949760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 22 - 345
Target Start/End: Complemental strand, 19954525 - 19954206
Alignment:
Q  22 catataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattggaatg 121  Q
    |||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||| |||||||||||| |    
T  19954525 catataagactggtcctagtaccatataagagtggtcttagtacaataatagagtggtatcaataccatattggagtgatcttagcaccatattggaagg 19954426  T
Q  122 tgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgcttgcac 221  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||| ||    
T  19954425 tgtatttctagaacagatcctatagtgcaataggactcttatacagttgcagctgggctgttttatcaaggggacgtcgtggttgatagtctgcttgtac 19954326  T
Q  222 aattttgggcaatgccacgaaatgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttttaact 321  Q
    ||||||||||| |||||| ||| ||||||||||||| ||     ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  19954325 aattttgggcagtgccacaaaacgtcttaaagagagcgat----ctagtctgcgactcaacctagtaatctcttcggtgacagaaaatatatttttaact 19954230  T
Q  322 aattttgactattgttccaacaat 345  Q
    ||||||||||||||||||| ||||    
T  19954229 aattttgactattgttccatcaat 19954206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 18 - 347
Target Start/End: Complemental strand, 2470231 - 2469906
Alignment:
Q  18 acaccatataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattgg 117  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  2470231 acactatataagactggtcctagtaccatataagagtggtcttagtactataataaagtggtatcaataccatattggagtggtcttagaaccatattgg 2470132  T
Q  118 aatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgctt 217  Q
    || || ||||||| ||||| ||||||||||||||||||| ||| ||||||||||||||| | ||||||||| |||||||||||| |||||||||||||||    
T  2470131 aaggtatatttctcgaacaaatcctatagtgcaataggactctgatacagttgtagctgtgttgttttatcctggggacgtcgtagttgatagtctgctt 2470032  T
Q  218 gcacaattttgggcaatgccacgaaatgtcttaaagagagagagggacctagtctgcgactcagcct-agtaatctcttcggtgacagaaaaaatatttt 316  Q
    ||||||||||| ||| |||||| ||| |||||||||    |||| ||||||||  || |||| |||| |  ||||||||||||||||| |||||||||||    
T  2470031 gcacaattttgagcagtgccacaaaacgtcttaaag----agagcgacctagttcgcaactctgcctgataaatctcttcggtgacag-aaaaatatttt 2469937  T
Q  317 taactaattttgactattgttccaacaatct 347  Q
    |||| |||||||||||||||| |||||||||    
T  2469936 taaccaattttgactattgtttcaacaatct 2469906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 150 - 345
Target Start/End: Original strand, 4544221 - 4544412
Alignment:
Q  150 aataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgcttgcacaattttgggcaatgccacgaaatgtctt 249  Q
    ||||||| ||| |||||||||||||||| |||||||||| | ||||||| |||||||||||||| |||||||||||||| ||| ||||| |||| |||||    
T  4544221 aataggactctgatacagttgtagctggactgttttatcctagggacgtagtggttgatagtctacttgcacaattttgagcagtgccatgaaacgtctt 4544320  T
Q  250 aaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttttaactaattttgactattgttccaacaat 345  Q
    |||||||| ||    ||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  4544321 aaagagagcga----cctagtccgtgactcagcctagtaatctcttcggtgactgaaaaaatatttttaactaattttgactattgttctaacaat 4544412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 41 - 345
Target Start/End: Complemental strand, 34517473 - 34517177
Alignment:
Q  41 tatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattggaatgtgtatttctagaacagatc 140  Q
    |||||||| ||||||||||   ||||| |||||||||||| ||||| |||||   |||||| |||| || ||||| ||| |||||||| ||||||| |||    
T  34517473 tatcatattagagtggtctcgctaccaaaatagagtggta-aaatatcatatccaagtggttttagcacaatatttgaaagtgtatttttagaacatatc 34517375  T
Q  141 ctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgcttgcacaattttgggcaatgccacg 240  Q
     || | | || ||||| ||| |||||||||||| || | ||||||||||||||| |||||||||||||||||| ||||||||||||| | || |||||||    
T  34517374 ttacaatacagtaggactctgatacagttgtagttgagttgttttatcttgggggcgtcgtggttgatagtctccttgcacaatttt-gacagtgccacg 34517276  T
Q  241 aaatgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttttaactaattttgactattgttcca 340  Q
    ||| ||||||||| ||   |  || ||| |||| |||||| |||| |||||||||| |||||  | ||||||||||||||||||||||||||||||||||    
T  34517275 aaacgtcttaaag-ga---aacgatctactctgtgactcaacctaataatctcttcagtgac--ataaaatatttttaactaattttgactattgttcca 34517182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 30779125 - 30778953
Alignment:
Q  17 aacaccatataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattg 116  Q
    |||||||||| ||| |  || ||||| ||||| ||| | ||||| |||||||||||||||||||| | |||||||||| ||||||||||| ||||| ||     
T  30779125 aacaccatattagagttgtcttagtaccatattagaatagtcttggtaccataatagagtggtatcagtaccatattgaagtggtcttagcaccattttt 30779026  T
Q  117 gaatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatct 189  Q
    ||| |||||||||||||||||||||||||||| |||| || ||| ||||||||||||||  ||||||||||||    
T  30779025 gaaagtgtatttctagaacagatcctatagtgtaatatgactctgatacagttgtagctaagctgttttatct 30778953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 44 - 227
Target Start/End: Complemental strand, 7146046 - 7145863
Alignment:
Q  44 catataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattggaatgtgtatttctagaacagatccta 143  Q
    ||||| ||||||| ||||||||||||||| |||||| |||||| |||||||||||||| |||  |||||||   || |||||||||||||||| ||||||    
T  7146046 catattagagtggccttagtaccataatacagtggtgtaaatatcatattggagtggttttaacaccatatctaaaggtgtatttctagaacatatccta 7145947  T
Q  144 tagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgcttgcacaatttt 227  Q
     | |||| ||||| ||  ||||||||||||||| ||||||||||  || ||  ||||| |||||||||||||||||||||||||    
T  7145946 caatgcagtaggactccgatacagttgtagctgagctgttttattctgtgggtgtcgtagttgatagtctgcttgcacaatttt 7145863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 44 - 342
Target Start/End: Original strand, 27236201 - 27236497
Alignment:
Q  44 catataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattggaatgtgtatttctagaacagatccta 143  Q
    ||||| |||||| ||||||| ||||||||||||| ||| ||||||||||| |||||||||||| ||||||||  || || |||||||| | |||||| ||    
T  27236201 catattagagtgatcttagtgccataatagagtgatatcaataccatattagagtggtcttagtaccatatttaaaggtatatttctatagcagatcata 27236300  T
Q  144 tagtgca--ataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgcttgcacaattttgggcaatgccacga 241  Q
    ||||| |  |||||| ||| ||||| || ||| |||| |||| |||| ||||  |||||||||||||||| || |||||||| |||| ||| |||||| |    
T  27236301 tagtgtaatataggactctgatacaattttagttgggttgttctatcatgggagcgtcgtggttgatagtttgtttgcacaactttgagcagtgccacaa 27236400  T
Q  242 aatgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttttaactaattttgactattgttccaa 341  Q
    ||  ||| ||    ||| || ||| ||||| |||| |||||||| |||||||||  |||| || ||||   |||||||||||||||| |||||||| |||    
T  27236401 aacatctcaa----agaaagcgacatagtccgcgaatcagcctaataatctcttttgtgatagtaaaatattttttaactaattttggctattgttacaa 27236496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 40125868 - 40125963
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||| |||||||||||| | || ||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  40125868 acagttgtagctgggcttgttttatcttggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagag 40125963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 164 - 256
Target Start/End: Complemental strand, 33416659 - 33416565
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagaga 256  Q
    ||||||||||||||||| |||||||||||| | || |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||    
T  33416659 acagttgtagctgggcttgttttatcttggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagaga 33416565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 4544131 - 4544219
Alignment:
Q  18 acaccatataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttag 106  Q
    ||||||||||||| || |||||||| ||||||||||| ||||||||||||||||||| |||||| |||||||||||| | |||||||||    
T  4544131 acaccatataagagtggtcctagtaccatataagagtagtcttagtaccataatagaatggtatcaataccatattgaaatggtcttag 4544219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 175 - 257
Target Start/End: Complemental strand, 20072196 - 20072115
Alignment:
Q  175 tgggctgttttatcttggggacgtcgtggttgatagtctgcttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||| || |||||||||||||||| ||| ||||||||||||| || |||| |||||||||||||||||||||    
T  20072196 tgggctgttttatct-ggagacgtcgtggttgataatctacttgcacaattttaggaaatgtcacgaaatgtcttaaagagag 20072115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 28237970 - 28237840
Alignment:
Q  95 gagtggtcttagaaccatattggaatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttgggg 194  Q
    ||||| |||||  |||||||| ||  |||||||| |||||||||  || ||||||||||||| ||| |||||||||||| |||| ||||||||| ||       
T  28237970 gagtgctcttaacaccatatttgatggtgtatttttagaacaga--ctctagtgcaataggactctgatacagttgtagttgggttgttttatcctgaaa 28237873  T
Q  195 acgtcgtggttgatagtctgcttgcacaatttt 227  Q
    ||||||||||||||||||||  |||||||||||    
T  28237872 acgtcgtggttgatagtctgtatgcacaatttt 28237840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 31449849 - 31449944
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||| |||||| || |||||||| ||| | || |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||    
T  31449849 acagttgcagctggacttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagag 31449944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 256 - 345
Target Start/End: Complemental strand, 30777111 - 30777024
Alignment:
Q  256 agagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttttaactaattttgactattgttccaacaat 345  Q
    |||||| ||||||||||| |||||| |||| |||| |||||| |||||  |||||||||||||||| |||||||||||| ||||||||||    
T  30777111 agagagtgacctagtctgtgactcaacctaataatttcttcgatgaca--aaaaatatttttaacttattttgactattattccaacaat 30777024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 257
Target Start/End: Original strand, 15875650 - 15875746
Alignment:
Q  163 tacagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||| ||||||||| ||| |||||||| ||| | || ||||||||||||||||| ||||||||||||||||| |||||||||| ||| |||||||||    
T  15875650 tacaattgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcctaaagagag 15875746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 180 - 254
Target Start/End: Original strand, 17953873 - 17953948
Alignment:
Q  180 tgttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaaga 254  Q
    ||||||||||||| | || ||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  17953873 tgttttatcttggaggcggcgtggttgatattctgtcttgcacaattttgggcagtgccacgaaacgtcttaaaga 17953948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 19166746 - 19166651
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgct-tgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||| || ||| |||||||| ||| | || |||||||||||||||||  |||||||||||||||| |||||||||| |||||||||||||    
T  19166746 acagttgtagttgagcttgttttatcctggaggcggcgtggttgatagtctgccgtgcacaattttgggcagtgccacgaaacgtcttaaagagag 19166651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 34118578 - 34118483
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||| |||||||| |   | || ||||||||||||||||| ||||||||||||||||| ||||| |||| |||||||||||||    
T  34118578 acagttgtagctgggcttgttttatcctaaaggcgacgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagag 34118483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 44925923 - 44926001
Alignment:
Q  180 tgttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||| ||| | || ||||||||||||||||| ||||||||||||||||| |||||||||| || ||||||||||    
T  44925923 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgttttaaagagag 44926001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 18876367 - 18876440
Alignment:
Q  180 tgttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaa 252  Q
    ||||||||| ||| | || |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||    
T  18876367 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaa 18876440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 257
Target Start/End: Complemental strand, 1807548 - 1807489
Alignment:
Q  199 cgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||| ||||||||||||||||| || ||||||| |||||||||||||    
T  1807548 cgtggttgatagtctgccttgcacaattttgggcagtgtcacgaaacgtcttaaagagag 1807489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 17026047 - 17025952
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||||| | || |||||||| ||| | || |||| ||||||||||| |||||||||| ||||||| |||||||||| |||||||||||||    
T  17026047 acagttgtagctagacttgttttatcctggaggcgacgtgattgatagtctgtcttgcacaatgttgggcagtgccacgaaacgtcttaaagagag 17025952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 17556539 - 17556444
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||||| | || |||||||| ||| | || |||| ||||||||||| |||||||||| ||||||| |||||||||| |||||||||||||    
T  17556539 acagttgtagctagacttgttttatcctggaggcgacgtgattgatagtctgtcttgcacaatgttgggcagtgccacgaaacgtcttaaagagag 17556444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 257
Target Start/End: Complemental strand, 36683655 - 36683596
Alignment:
Q  199 cgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||| || |||||||||||||| |||||||||| |||||||||||||    
T  36683655 cgtggttgatagtctgccttacacaattttgggcagtgccacgaaacgtcttaaagagag 36683596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 24090722 - 24090644
Alignment:
Q  180 tgttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||| | || |||| |||||| ||||| |||||||| |||||||| |||||||||| |||||||||||||    
T  24090722 tgttttatcttggaggcgacgtgattgatattctgccttgcacaactttgggcagtgccacgaaacgtcttaaagagag 24090644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 38182220 - 38182315
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||| ||| |||||||| ||| | || ||||||||||| |||| |||||||||| ||||| | |||||||||| || ||||||||||    
T  38182220 acagttgtagctgtgcttgttttatcctggaggcggcgtggttgataatctgccttgcacaatcttgggaagtgccacgaaacgttttaaagagag 38182315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 257
Target Start/End: Original strand, 40130722 - 40130764
Alignment:
Q  215 cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||||||||||| |||||||||| |||||||||||||    
T  40130722 cttgcacaattttgggcagtgccacgaaacgtcttaaagagag 40130764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 257
Target Start/End: Original strand, 4238337 - 4238393
Alignment:
Q  202 ggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||||||| ||||||||||||||||| ||||| |||| || ||||||||||    
T  4238337 ggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtgttaaagagag 4238393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 257
Target Start/End: Original strand, 4243076 - 4243132
Alignment:
Q  202 ggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||||||| ||||||||||||||||| ||||| |||| || ||||||||||    
T  4243076 ggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtgttaaagagag 4243132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 28559668 - 28559732
Alignment:
Q  194 gacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||| ||||||||||||| ||| |||||||||||||| || |||||||||| |||||| ||||||    
T  28559668 gacggcgtggttgatagtttgccttgcacaattttggacagtgccacgaaacgtcttatagagag 28559732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 1910988 - 1911047
Alignment:
Q  199 cgtggttgatagtctgctt-gcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||||| |||||||||||   | |||||||||| |||||||||||||    
T  1910988 cgtggttgatagtctgctttgcacaattttgactagtgccacgaaacgtcttaaagagag 1911047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 200 - 257
Target Start/End: Complemental strand, 2965705 - 2965647
Alignment:
Q  200 gtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||||| || ||||||||||||| |||| |||||||||| || ||||||||||    
T  2965705 gtggttgatagtgtgtcttgcacaattttaggcagtgccacgaaacgttttaaagagag 2965647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 256
Target Start/End: Original strand, 43302718 - 43302796
Alignment:
Q  180 tgttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttggg-caatgccacgaaatgtcttaaagaga 256  Q
    ||||||||| ||| | || ||||||||||||||| | |||||||||||| || || |||||||||| ||||||||||||    
T  43302718 tgttttatcctggaggcggcgtggttgatagtctaccttgcacaatttttggacagtgccacgaaacgtcttaaagaga 43302796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 257
Target Start/End: Original strand, 33616721 - 33616804
Alignment:
Q  174 ctgggctgttttatcttggggacgtcgtggttgatagtct-gcttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||| ||| |||| |||||||| ||||||  |||||||||  ||||| | |||| ||||| |||||||||||||    
T  33616721 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgccgcgaaacgtcttaaagagag 33616804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 216; Significance: 1e-118; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 18 - 345
Target Start/End: Complemental strand, 14104847 - 14104526
Alignment:
Q  18 acaccatataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattgg 117  Q
    |||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  14104847 acaccatataagactggtcctagtaccatataagagtggttttagtaccataatagagtggtatgaataccatattggagtggtcttagaaccatattgg 14104748  T
Q  118 aatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgctt 217  Q
    || |||||||||||||||| ||||||||||||||||||| ||| |||||||||||||| |||||||||||| |||||||||||||||||||||| || ||    
T  14104747 aaggtgtatttctagaacatatcctatagtgcaataggactctgatacagttgtagctaggctgttttatcatggggacgtcgtggttgatagtttgttt 14104648  T
Q  218 gcacaattttgggcaatgccacgaaatgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatattttt 317  Q
    ||||||||||| ||| || ||||||| |||||||||    |||| ||||||||| |||||||||||||||||| | |||| ||||||  |||||||||||    
T  14104647 gcacaattttgagcagtgacacgaaacgtcttaaag----agagcgacctagtccgcgactcagcctagtaatttgttcgatgacag--aaaatattttt 14104554  T
Q  318 aactaattttgactattgttccaacaat 345  Q
    ||||||||||||||||||||||||||||    
T  14104553 aactaattttgactattgttccaacaat 14104526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 17 - 343
Target Start/End: Original strand, 44957274 - 44957595
Alignment:
Q  17 aacaccatataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattg 116  Q
    |||||||||| ||| || || ||||| |||||||||||||| ||||||||||||||||||||||| |||  |||||| |||||||||||| ||||||||     
T  44957274 aacaccatattagagtggtcatagtaccatataagagtggtgttagtaccataatagagtggtatcaatgtcatattagagtggtcttagcaccatattt 44957373  T
Q  117 gaatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgct 216  Q
    ||| |||||||||||||||||||  ||||||||||||||| ||| ||||||||||||| || |||||||||| ||| || ||||||||||||||||||||    
T  44957374 gaaggtgtatttctagaacagattatatagtgcaataggactctgatacagttgtagcaggactgttttatcctggagatgtcgtggttgatagtctgct 44957473  T
Q  217 tgcacaattttgggcaatgccacgaaatgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttt 316  Q
    |||||||||||  ||| |||||| ||| ||||||||||||  ||    |||||||   ||||||||||||||||||||||||||||| ||| ||| ||||    
T  44957474 tgcacaattttttgcagtgccacaaaacgtcttaaagagaacga----cctagtccatgactcagcctagtaatctcttcggtgacaaaaataat-tttt 44957568  T
Q  317 taactaattttgactattgttccaaca 343  Q
    |||||||||||||||||||||||||||    
T  44957569 taactaattttgactattgttccaaca 44957595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 55 - 345
Target Start/End: Original strand, 13060243 - 13060528
Alignment:
Q  55 ggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattggaatgtg-tatttctagaacagatcctatagtgcaata 153  Q
    |||||| |||||||| |||||||||| ||||| ||||||| ||||||||||| |||||||| ||||||| |||| ||||||| ||||||| | |||| ||    
T  13060243 ggtcttggtaccatagtagagtggtaaaaatatcatattgcagtggtcttagtaccatatttgaatgtgttattactagaacggatcctacaatgcagta 13060342  T
Q  154 ggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgcttgcacaattttgggcaatgccacgaaatgtcttaaag 253  Q
    ||| ||| |||||||||||| || | ||||| ||||| |||||||| | ||||||||||| ||| ||||||||| |||  ||| || ||  |||||||      
T  13060343 ggactctgatacagttgtagttgagttgtttcatcttagggacgtcattgttgatagtcttctttcacaatttttggcggtgcaacaaatcgtcttaa-- 13060440  T
Q  254 agagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttttaactaattttgactattgttccaacaat 345  Q
       || || ||||||||| | ||||||||||| |||| |||||||||||  | ||||||||||||||||||||||||||||||| |||||||    
T  13060441 --tgaaagcgacctagtccgtgactcagcctaataatgtcttcggtgac--ataaaatatttttaactaattttgactattgtttcaacaat 13060528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 30651041 - 30650946
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||| |||||||||||| | || ||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  30651041 acagttgtagctgggcttgttttatcttggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagag 30650946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 1934976 - 1935071
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||| ||||||||| |||||||| ||| | || |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||    
T  1934976 acagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagag 1935071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 9180707 - 9180802
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||| |||||||| ||| | || ||||||||||||||||| |||||||||||||| || |||||||||| |||||||||||||    
T  9180707 acagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagag 9180802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 9189786 - 9189881
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||| |||||||| ||| | || ||||||||||||||||| |||||||||||||| || |||||||||| |||||||||||||    
T  9189786 acagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagag 9189881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 18344543 - 18344448
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||| |||||||| ||| | || ||||||| ||||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  18344543 acagttgtagctgggcttgttttatcctggagccggcgtggttaatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagag 18344448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 10160707 - 10160802
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||| ||||| ||| |||||||| ||| | || ||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  10160707 acagttgcagctgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagag 10160802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 25478280 - 25478375
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||| |||||||  ||| | || ||||||||||||||||| ||||||||||||||||| || ||||||| |||||||||||||    
T  25478280 acagttgtagctgggcttgttttattctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgtcacgaaacgtcttaaagagag 25478375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 29677493 - 29677398
Alignment:
Q  164 acagttgtagctgggctg-ttttatcttggggacgtcgtggttgatagtctgctt-gcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||||||| ||  ||||||| ||| | || ||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||    
T  29677493 acagttgtagctggacttattttatcctggaggcggcgtggttgatagtctgctttgcacaattttgggcagtgccacgaaacgtcttaaagagag 29677398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 12797037 - 12796942
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||| || || |||||||| ||| |||| |||||||||||||||| |||| ||||||||||||| |||||| ||| |||||||||||||    
T  12797037 acagttgtagccggacttgttttatcctggagacggcgtggttgatagtctgtcttgaacaattttgggcagtgccacaaaacgtcttaaagagag 12796942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 25497308 - 25497403
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||| |||||||| ||| | || |||||||||||||||| ||||||||| |||||||| ||  |||||| |||||||||||||    
T  25497308 acagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgacttgcacaaatttgggcagtgttacgaaacgtcttaaagagag 25497403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 30658375 - 30658280
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||| ||||||||| |||||||| ||| | || ||||||||||||||||| ||||||||||||| | | |||||||||| |||||||||||||    
T  30658375 acagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacgtcttaaagagag 30658280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 257
Target Start/End: Original strand, 7737838 - 7737929
Alignment:
Q  168 ttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||| |||||| |||||||| ||| | || |||||||||||||||| |||||||||||||||||| |||||| |||  ||||||||||||    
T  7737838 ttgtagttgggcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacaaaacttcttaaagagag 7737929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 19892449 - 19892544
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||| ||| |||||||| ||| | || ||||||||||||||||  |||||||||||||| || ||||| |||| |||||||||||||    
T  19892449 acagttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgtgttgcacaattttggacagtgccaggaaacgtcttaaagagag 19892544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 31326851 - 31326756
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||| |||||| |||||||| ||| |  | ||||||||||||||||| ||||||||||||||||| || || |||| |||||||||||||    
T  31326851 acagttgtagttgggcttgttttatcctggaggtggcgtggttgatagtctgccttgcacaattttgggcagtggcatgaaacgtcttaaagagag 31326756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 35638980 - 35639075
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||| ||| |||||||| ||| | || |||||||||||  ||| |||||||||||||||||| |||||||||| |||||||| ||||    
T  35638980 acagttgtagctgagcttgttttatcctggaggcggcgtggttgatacgctgtcttgcacaattttgggcagtgccacgaaacgtcttaaaaagag 35639075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 52 - 228
Target Start/End: Original strand, 41558893 - 41559069
Alignment:
Q  52 agtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattg-gaatgtgtatttctagaacagatcctatagtgca 150  Q
    |||||||| ||||||||||||||||| |||  |||| |||||| ||||||||||  ||||||||  ||| |||| || ||||||  ||||||| | ||||    
T  41558893 agtggtctcagtaccataatagagtgatatcgatactatattgaagtggtcttatcaccatattttgaaggtgtgtt-ctagaatggatcctacaatgca 41558991  T
Q  151 ataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgcttgcacaattttg 228  Q
    ||  || | | ||||||||| || ||  ||||||||||  |||||||||||| |||||| | | ||| ||||||||||    
T  41558992 attagactttgatacagttgcagttgaactgttttatcacggggacgtcgtgattgataatttacttacacaattttg 41559069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 257
Target Start/End: Complemental strand, 30631655 - 30631596
Alignment:
Q  199 cgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||||||||  ||||||||||||| ||||||||||||||| || ||||||||||    
T  30631655 cgtggttgatagtctttcttgcacaatttttggcaatgccacgaaaagttttaaagagag 30631596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 168 - 257
Target Start/End: Complemental strand, 35602030 - 35601939
Alignment:
Q  168 ttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||| | |||||||| ||| | || ||||||||||| |||| ||||||||||||||| || |||||||||| |||||||| ||||    
T  35602030 ttgtagctgggtttgttttatcctggaggcggcgtggttgatactctgtcttgcacaattttggacagtgccacgaaacgtcttaaaaagag 35601939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 300
Target Start/End: Original strand, 21523985 - 21524080
Alignment:
Q  201 tggttgatagtctgcttgcacaattttgggcaatgccacgaaatgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtg 300  Q
    |||||| |||||||||||||||| |||||||| |||||||||  || ||||    ||||| |||||||||  |||||||| ||||| ||| |||||||||    
T  21523985 tggttgttagtctgcttgcacaaatttgggcagtgccacgaatagttttaa----agagaaggacctagtacgcgactcatcctagaaatttcttcggtg 21524080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 42926778 - 42926839
Alignment:
Q  199 cgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaa--tgtcttaaagagag 257  Q
    ||||||||||||||| | ||||||||||||||||| ||||||||||  ||||||||||||||    
T  42926778 cgtggttgatagtctaccttgcacaattttgggcagtgccacgaaacgtgtcttaaagagag 42926839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 257
Target Start/End: Complemental strand, 28603374 - 28603315
Alignment:
Q  199 cgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||||||||| ||||||||||||||| || || ||||||| || ||||||||||    
T  28603374 cgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgttttaaagagag 28603315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 29677879 - 29677784
Alignment:
Q  164 acagttgtagctgggctgtttt-atcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||| |||| ||| ||  | || | ||||||||||| ||| |||||||||||| |||| |||||| ||||||||||| |||||    
T  29677879 acagttgtagctgggctttttttatcctgtaggcggcttggttgatagtttgccttgcacaatttttggcagtgccactaaatgtcttaatgagag 29677784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 243
Target Start/End: Original strand, 21523739 - 21523784
Alignment:
Q  199 cgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaa 243  Q
    ||||||||||||||| | ||||||||||||||||| ||||||||||    
T  21523739 cgtggttgatagtctcccttgcacaattttgggcagtgccacgaaa 21523784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 195; Significance: 1e-106; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 18 - 345
Target Start/End: Original strand, 18265343 - 18265666
Alignment:
Q  18 acaccatataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattgg 117  Q
    ||||||||||||| || |||||||| |||||||||||||||||||||||||||| || || ||| |||||||||||||| ||||||||| ||||||||||    
T  18265343 acaccatataagagtggtcctagtaccatataagagtggtcttagtaccataattgaatgatatcaataccatattggattggtcttagcaccatattgg 18265442  T
Q  118 aatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgctt 217  Q
    || ||||||||||| |||||||| || ||| ||||| || ||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||    
T  18265443 aaggtgtatttctataacagatcatagagtacaataagactctgatacagttgtagctgagctgttttatcatggggacgtcgtggttgatagtctgatt 18265542  T
Q  218 gcacaattttgggcaatgccacgaaatgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatattttt 317  Q
    |||||||||| |||| || ||| ||| |||||||    |||||| ||||||||| || ||||||||||||||||||||||||||||||||||||| ||||    
T  18265543 gcacaattttaggcagtgtcacaaaacgtcttaa----agagagcgacctagtccgctactcagcctagtaatctcttcggtgacagaaaaaatactttt 18265638  T
Q  318 aactaattttgactattgttccaacaat 345  Q
    ||||||||||||||||||||||||||||    
T  18265639 aactaattttgactattgttccaacaat 18265666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 17 - 344
Target Start/End: Original strand, 1286103 - 1286423
Alignment:
Q  17 aacaccatataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattg 116  Q
    |||||| ||| ||| || |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||     
T  1286103 aacaccgtattagattggtcctagtaccatataagagtggtcttagtaccataatagagtggtatcaataccatattggagtggtcttagcaccatattt 1286202  T
Q  117 gaatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgct 216  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||| | ||||||||| ||| |||||||||||| ||| |||  |    
T  1286203 gaatgtgtatttctagaacagatcctatagtgcaataggactctgatagagttgtagctgagttgttttatcatggagacgtcgtggttaataatctagt 1286302  T
Q  217 tgcacaattttgggcaatgccacgaaatgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttt 316  Q
    ||||||||||| ||||||||||| ||||||||||||||||| |     | ||||| |||||||||||||||||||||| |||||||||  ||||||||||    
T  1286303 tgcacaattttcggcaatgccac-aaatgtcttaaagagagcgg----catagtccgcgactcagcctagtaatctctccggtgacag--aaaatatttt 1286395  T
Q  317 taactaattttgactattgttccaacaa 344  Q
    |||||||||||||| |||||||||||||    
T  1286396 taactaattttgacaattgttccaacaa 1286423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 12501882 - 12501977
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgctt-gcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||| |||||||| ||| | || |||||||||||||||| || ||||||||||||||| |||||||||| |||||||||||||    
T  12501882 acagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgttttgcacaattttgggcagtgccacgaaacgtcttaaagagag 12501977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 29167956 - 29168051
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||| |||||| |||||||| ||| | || ||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  29167956 acagttgtagttgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagag 29168051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 36937494 - 36937589
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||| |||||||| ||| | || ||||||||||||||||| ||||||||||||||||| ||||| |||| |||||||||||||    
T  36937494 acagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagag 36937589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 36942248 - 36942343
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||| |||||||| ||| | || ||||||||||||||||| ||||||||||||||||| ||||| |||| |||||||||||||    
T  36942248 acagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagag 36942343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 42001546 - 42001451
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||| |||||||| ||| | || |||||||||||||||| ||| |||||||||||||| |||||||||| |||||||||||||    
T  42001546 acagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgtcttacacaattttgggcagtgccacgaaacgtcttaaagagag 42001451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 152 - 302
Target Start/End: Original strand, 25215200 - 25215344
Alignment:
Q  152 taggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgcttgcacaattttgggcaatgccacgaaatgtcttaa 251  Q
    ||||| ||| ||| ||||||| ||||  ||||||||| | ||  |||| ||||||||||| | ||||||||||||| ||||||| ||  |||||||||||    
T  25215200 taggactctgatatagttgtacctggtttgttttatcctagg--cgtcatggttgatagtatacttgcacaattttaggcaatgtcataaaatgtcttaa 25215297  T
Q  252 agagagagagggacctagtctgcgactcagcctagtaatctcttcggtgac 302  Q
    |||||| ||    ||||||||||||||||||| | ||||||||||||||||    
T  25215298 agagagcga----cctagtctgcgactcagccaaataatctcttcggtgac 25215344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 152 - 302
Target Start/End: Original strand, 25279351 - 25279495
Alignment:
Q  152 taggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgcttgcacaattttgggcaatgccacgaaatgtcttaa 251  Q
    ||||| ||| ||| ||||||| ||||  ||||||||| | ||  |||| ||||||||||| | ||||||||||||| ||||||| ||  |||||||||||    
T  25279351 taggactctgatatagttgtacctggtttgttttatcctagg--cgtcatggttgatagtatacttgcacaattttaggcaatgtcataaaatgtcttaa 25279448  T
Q  252 agagagagagggacctagtctgcgactcagcctagtaatctcttcggtgac 302  Q
    |||||| ||    ||||||||||||||||||| | ||||||||||||||||    
T  25279449 agagagcga----cctagtctgcgactcagccaaataatctcttcggtgac 25279495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 556807 - 556712
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||| ||| |||||||| ||| | || ||||||||||||||||| ||||||||||||||||| |||||| ||| |||||||||||||    
T  556807 acagttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaagagag 556712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 561579 - 561484
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||| ||| |||||||| ||| | || ||||||||||||||||| ||||||||||||||||| |||||| ||| |||||||||||||    
T  561579 acagttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaagagag 561484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 168 - 257
Target Start/End: Complemental strand, 12103133 - 12103042
Alignment:
Q  168 ttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||| |||||| |||||||| ||| | || ||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  12103133 ttgtagttgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagag 12103042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 26667384 - 26667289
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||| |||||| || |||||||| ||| | || ||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  26667384 acagttgcagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagag 26667289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 26938981 - 26938886
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||| |||||| || |||||||| ||| | || ||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  26938981 acagttgcagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagag 26938886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 37248778 - 37248873
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||| ||||||||| |||||||| ||| | || ||||||||||||||||| |||||||||||| || | ||||||||||||||||||||||||    
T  37248778 acagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggtagtgccacgaaatgtcttaaagagag 37248873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 41996777 - 41996682
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||| |||||| |||||||| ||| | || |||||||||||||||| ||| |||||||||||||| |||||||||| |||||||||||||    
T  41996777 acagttgtagttgggcttgttttatcctggaggcggcgtggttgatagtctgtcttacacaattttgggcagtgccacgaaacgtcttaaagagag 41996682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 6514584 - 6514679
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||  ||| |||||||| ||| | || ||||||||||||||||| ||||| ||||||||||| |||||||||| |||||||||||||    
T  6514584 acagttgtagctaagcttgttttatcctggaggcggcgtggttgatagtctgccttgcaaaattttgggcagtgccacgaaacgtcttaaagagag 6514679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 36423749 - 36423654
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||| ||||||||||| |||||||  ||| | || ||||||||||||||||| ||||||||||||||||| |||| ||||| |||||||||||||    
T  36423749 acagtagtagctgggcttgttttattctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccgcgaaacgtcttaaagagag 36423654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 36428821 - 36428726
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||| |||||||| ||| | || ||||||||||||||||| ||||||||||||||||| | || | ||| |||||||||||||    
T  36428821 acagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagttccgcaaaacgtcttaaagagag 36428726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 39523161 - 39523066
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||| |||||| || |||||||| ||| | || |||||||||||||||| |||||||||||||||||  |||||||||| |||||||||||||    
T  39523161 acagttgcagctggacttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcggtgccacgaaacgtcttaaagagag 39523066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 32461549 - 32461627
Alignment:
Q  180 tgttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||| ||| | || |||||||||||||||| |||||||||||||||||| |||||| ||| |||||||||||||    
T  32461549 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacaaaacgtcttaaagagag 32461627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 255
Target Start/End: Original strand, 12045122 - 12045215
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagag 255  Q
    ||||||||||||  ||| |||||||| ||| | || |||||| ||||||||| |||||||||||||||||| |||||||||| |||||||||||    
T  12045122 acagttgtagctatgcttgttttatcctggaggcggcgtggtcgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagag 12045215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 257
Target Start/End: Complemental strand, 40147988 - 40147912
Alignment:
Q  182 ttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||| ||| | || |||||||||||||||| |||||||||||||||||| ||||||||||  ||||||||||||    
T  40147988 ttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacatcttaaagagag 40147912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 257
Target Start/End: Complemental strand, 3666008 - 3665949
Alignment:
Q  199 cgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||| ||||| |||||||    
T  3666008 cgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttgaagagag 3665949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 6155402 - 6155497
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||| |||||||| ||| | ||  ||||||||||||||| |||| | |||||||| || |||||||||| |||||||||||||    
T  6155402 acagttgtagctgggcttgttttatcctggaggcggtgtggttgatagtctgtcttgtaaaattttggacagtgccacgaaacgtcttaaagagag 6155497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 257
Target Start/End: Complemental strand, 7451834 - 7451775
Alignment:
Q  199 cgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||| |||||||||||||| || |||||||||| |||||||||||||    
T  7451834 cgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagag 7451775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 35679858 - 35679953
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||| || ||| |||||||| ||| | || ||||||||||||||||| |||||||||||| | || |||||||||| |||||||||||||    
T  35679858 acagttgtagttgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaatttttgacagtgccacgaaacgtcttaaagagag 35679953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 37652849 - 37652908
Alignment:
Q  199 cgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||| |||||||||||||| ||||| ||||||| |||||||||||||    
T  37652849 cgtggttgatagtctgccttgcacaattttggacaatgtcacgaaacgtcttaaagagag 37652908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 39518522 - 39518427
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgct-tgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||| |||||| || |||||||| ||| | || |||||||||||||||||  |||||||||||||||  |||||||||| |||||||||||||    
T  39518522 acagttgcagctggacttgttttatcctggaggcggcgtggttgatagtctgccatgcacaattttgggcggtgccacgaaacgtcttaaagagag 39518427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 41587143 - 41587238
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||| ||| |||||||| ||| | || |||||||||||||||| ||||||||||||||  || || ||||||| |||||||||||||    
T  41587143 acagttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgaacagtgtcacgaaacgtcttaaagagag 41587238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 164 - 252
Target Start/End: Original strand, 10759803 - 10759893
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaa 252  Q
    |||||||||  |||||| |||||||| ||| | || ||||||||||||||||| ||||||||||||||||| |||||| ||| ||||||||    
T  10759803 acagttgtaaatgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaa 10759893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 164 - 256
Target Start/End: Original strand, 12041915 - 12042009
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagaga 256  Q
    |||||||||||||| || |||||||| ||| | || ||||||||||||| ||| ||||| | ||||||||| |||||||||| ||||||||||||    
T  12041915 acagttgtagctggacttgttttatcctggaggcggcgtggttgatagtttgccttgcatatttttgggcagtgccacgaaacgtcttaaagaga 12042009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 12102814 - 12102909
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||| ||| || |||||||| ||| ||||  |||||||||||||| | |||||||||||||| || |||||| ||| |||||||||||||    
T  12102814 acagttgtagttggtcttgttttatcctggtgacggtgtggttgatagtcttccttgcacaattttggccagtgccacaaaaagtcttaaagagag 12102909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 20181082 - 20181141
Alignment:
Q  199 cgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||| |||||||| |||||| |||||||| ||||||||||||| |||||||||||||    
T  20181082 cgtggttaatagtctgtcttgcataattttggacaatgccacgaaacgtcttaaagagag 20181141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 25215100 - 25215153
Alignment:
Q  37 ctagtatcatataagagtggtcttagtaccataatagagtggtataaataccat 90  Q
    |||||||||||| ||||||| ||||||||||||||||| || ||| ||||||||    
T  25215100 ctagtatcatattagagtggacttagtaccataatagaatgatatcaataccat 25215153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 25279251 - 25279304
Alignment:
Q  37 ctagtatcatataagagtggtcttagtaccataatagagtggtataaataccat 90  Q
    |||||||||||| ||||||| ||||||||||||||||| || ||| ||||||||    
T  25279251 ctagtatcatattagagtggacttagtaccataatagaatgatatcaataccat 25279304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 7805172 - 7805089
Alignment:
Q  174 ctgggctgttttatcttggggacgtcgtggttgatagtct-gcttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||| ||| |||| |||||||| ||||||  |||||||||  ||||| | |||| ||||| |||||||||||||    
T  7805172 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgccgcgaaacgtcttaaagagag 7805089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 257
Target Start/End: Original strand, 13582684 - 13582767
Alignment:
Q  174 ctgggctgttttatcttggggacgtcgtggttgatagtct-gcttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||| ||| |||| |||||||| ||||||  |||||||||  ||||| | |||| ||||| |||||||||||||    
T  13582684 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaa-attgggtagtgccgcgaaacgtcttaaagagag 13582767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 257
Target Start/End: Original strand, 24435863 - 24435946
Alignment:
Q  174 ctgggctgttttatcttggggacgtcgtggttgatagtct-gcttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||| ||| |||| |||||||||||||||  |||||||||  ||||  | |||| ||||| |||||||||||||    
T  24435863 ctgggctgttttatcctggagacggcgtggttgatagtctaccttgcacaa-cttggatagtgccgcgaaacgtcttaaagagag 24435946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 193; Significance: 1e-105; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 22 - 331
Target Start/End: Complemental strand, 20513359 - 20513055
Alignment:
Q  22 catataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattggaatg 121  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  | |||||||||| |    
T  20513359 catataagactggtcctagtaccatataagagtggtcttagtaccataatagagtggtatcaataccatattggagtggtcttaacatcatattggaagg 20513260  T
Q  122 tgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgcttgcac 221  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| | ||||||||| |||| |||||||||||||||||||||||||||    
T  20513259 tgtatttctagaacagatcctatagtgcaataggactctgatacagttgtagctgagttgttttatcctgggaacgtcgtggttgatagtctgcttgcac 20513160  T
Q  222 aattttgggcaatgccacgaaatgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttttaact 321  Q
    ||||||| ||| ||||||||||  ||||||||    |||| |||||||||  |||||||||||||||||||||||  |||||| ||||||||||||||||    
T  20513159 aattttgagcagtgccacgaaacatcttaaag----agagcgacctagtccacgactcagcctagtaatctcttcaatgacag-aaaaatatttttaact 20513065  T
Q  322 aattttgact 331  Q
    |||| |||||    
T  20513064 aattctgact 20513055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 17 - 343
Target Start/End: Original strand, 33722759 - 33723077
Alignment:
Q  17 aacaccatataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattg 116  Q
    |||| ||||| ||| || ||||| || |||||||||||||||| |||||||||||| ||||||||  ||||||||||||||||||||||| |  |||||     
T  33722759 aacatcatattagagtggtcctaataccatataagagtggtctcagtaccataataaagtggtatctataccatattggagtggtcttagca--atattt 33722856  T
Q  117 gaatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgct 216  Q
    ||| |||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||    
T  33722857 gaaggtgtatttctagaacagatcttatagtgcaataggactctgatacagttgtagctgggctgttttatcctggggacgtcgtggtcgatggtctgct 33722956  T
Q  217 tgcacaattttgggcaatgccacgaaatgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttt 316  Q
    ||||||||||||| || || ||||||| |||||||    |||||| ||||||||| ||||||||||||||||||||||||||||||||  ||||||||||    
T  33722957 tgcacaattttggacagtgtcacgaaacgtcttaa----agagagtgacctagtccgcgactcagcctagtaatctcttcggtgacag--aaaatatttt 33723050  T
Q  317 taactaattttgactattgttccaaca 343  Q
    |||||||||||||||||||||||||||    
T  33723051 taactaattttgactattgttccaaca 33723077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 22 - 345
Target Start/End: Original strand, 55081545 - 55081856
Alignment:
Q  22 catataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattggaatg 121  Q
    |||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  55081545 catataagactagtcctagtaccatataagagtggtcttagtaccataatagagtggtatcaataccatattggagtggtcttagaaccatattggaagg 55081644  T
Q  122 tgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgcttgcac 221  Q
    |||||||||||||||||||||||||| ||||| || ||| ||||||||||||||| ||||||||||| || ||||||| |||||||||||||||||| ||    
T  55081645 tgtatttctagaacagatcctatagtacaataagactctgatacagttgtagctgagctgttttatcctgaggacgtcatggttgatagtctgcttgtac 55081744  T
Q  222 aattttgggcaatgccacgaaatgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttttaact 321  Q
    ||||||| ||| ||| || ||| ||            ||| |||||| || ||||||||||||  ||||||||||| |||||| ||||||||||||||||    
T  55081745 aattttgagcagtgctacaaaacgt------------gagcgacctaatccgcgactcagcctgataatctcttcgatgacaggaaaaatatttttaact 55081832  T
Q  322 aattttgactattgttccaacaat 345  Q
    ||||||||||||||||||||||||    
T  55081833 aattttgactattgttccaacaat 55081856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 38 - 344
Target Start/End: Original strand, 16595798 - 16596095
Alignment:
Q  38 tagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattggaatgtgtatttctagaacag 137  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| | ||||||||||| |||||||||||||||||    
T  16595798 tagtaccatataagagtggtcttagtaccataatagagtggtatcaataccatattgaagtggtcttaaagccatattggaaggtgtatttctagaacag 16595897  T
Q  138 atcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgcttgcacaattttgggcaatgcc 237  Q
    ||| ||||||||||||||||||||      ||||||||| | ||||||||| |||||||||||||||||| ||||||||||||||||||||| || ||||    
T  16595898 atcttatagtgcaataggattctt------ttgtagctgagttgttttatcctggggacgtcgtggttgacagtctgcttgcacaattttggacagtgcc 16595991  T
Q  238 acgaaatgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgac-agaaaaaatatttttaactaattttgactattgt 336  Q
    || ||| |||||||    |||||| |||||| || ||||||||||||| |||||||||| ||||| | |||||||||||||||| |||||||||||||||    
T  16595992 acaaaacgtcttaa----agagagcgacctaatccgcgactcagcctaataatctcttcagtgacaaaaaaaaatatttttaaccaattttgactattgt 16596087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 17 - 343
Target Start/End: Original strand, 15020304 - 15020625
Alignment:
Q  17 aacaccatataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattg 116  Q
    |||||||||| ||| || |||||||| |||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||| | ||||||||     
T  15020304 aacaccatattagagtggtcctagtaccatataagagtggtcttagtac-ataatagagtggtatcaataccaaattggagtggtcttcgtaccatattt 15020402  T
Q  117 gaatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgct 216  Q
    ||| |||||||||||||||| |||||||||||||||  || ||| ||||| |||||| || ||||||||||| ||||  ||||||||||||||||||| |    
T  15020403 gaaggtgtatttctagaacatatcctatagtgcaatgagactctgatacaattgtagttgtgctgttttatcctgggagcgtcgtggttgatagtctgtt 15020502  T
Q  217 tgcacaattttgggcaatgccacgaaatgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttt 316  Q
    |||||||||||||| | || ||||||| || ||||||||||  |    |||||||||||| |||||||||||  ||||||||||||| | || || ||||    
T  15020503 tgcacaattttgggaagtgtcacgaaacgttttaaagagagcaa----cctagtctgcgattcagcctagtagactcttcggtgacatacaatatttttt 15020598  T
Q  317 taactaattttgactattgttccaaca 343  Q
    |||||||||||||||||||||||||||    
T  15020599 taactaattttgactattgttccaaca 15020625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 90 - 340
Target Start/End: Original strand, 40684742 - 40684986
Alignment:
Q  90 tattggagtggtcttagaaccatattggaatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatct 189  Q
    ||||||||| ||||||| ||||||||  || |||||||| || |||| || |||| ||| ||||||| ||| |||||||||||| || | |||||||||     
T  40684742 tattggagttgtcttagcaccatatttaaaggtgtatttataaaacaaattctatggtgtaataggactctgatacagttgtaggtgagttgttttatcc 40684841  T
Q  190 tggggacgtcgtggttgatagtctgcttgcacaattttgggcaatgccacgaaatgtcttaaagagagagagggacctagtctgcgactcagcctagtaa 289  Q
    | ||||||||||| |||||||||||||||||| ||||| | || | || | ||| |||||||    | |||| | |||| || || ||||| ||||||||    
T  40684842 t-gggacgtcgtgattgatagtctgcttgcacgattttagacagtaccgcaaaacgtcttaa----aaagagcggcctaatccgcaactcaacctagtaa 40684936  T
Q  290 tctcttcggtgacagaaaaaatatttttaactaattttgactattgttcca 340  Q
    | |||||  |||||| |||||||||||||||||||||| ||||||||||||    
T  40684937 tttcttccatgacag-aaaaatatttttaactaattttaactattgttcca 40684986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 96 - 256
Target Start/End: Original strand, 2575172 - 2575332
Alignment:
Q  96 agtggtcttagaaccatattggaatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttgggga 195  Q
    ||||||||||| |||||||| ||| |||||||| ||||||| || ||||||||||||| || ||  ||| ||||||||||| |||| ||| |  | ||||    
T  2575172 agtggtcttagtaccatatttgaaggtgtatttttagaacatattctatagtgcaatatgactcagatatagttgtagctgagctgctttctactaggga 2575271  T
Q  196 cgtcgtggttgatagtctgcttgcacaattttgggcaatgccacgaaatgtcttaaagaga 256  Q
     ||||||||||||| |||||||||| |||||| |||| ||| || ||| || |||||||||    
T  2575272 agtcgtggttgatattctgcttgcataattttaggcagtgctacaaaacgtattaaagaga 2575332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 31273633 - 31273538
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||| |||||||| ||| | || |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||    
T  31273633 acagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagag 31273538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 85 - 334
Target Start/End: Original strand, 39991783 - 39992027
Alignment:
Q  85 taccatattggagtggtcttagaaccatattggaatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttt 184  Q
    ||||||||| |||||||||||| |||||||| ||| || ||| |||||||| ||||||| | |||| || || | | |||||||||||| ||  ||| ||    
T  39991783 taccatattagagtggtcttagcaccatatttgaaggtctatatctagaacggatcctacaatgcagtaagactataatacagttgtagttgtactg-tt 39991881  T
Q  185 tatcttggggacgtcgtggttgatagtctgcttgcacaa-ttttgggcaatgccacgaaatgtcttaaagagagagagggacctagtctgcgactcagcc 283  Q
    |||||||| | |||||| ||| |||||||| |||||||| ||||||| | ||| || |||| ||||||||||| | |   || || | ||||||||| ||    
T  39991882 tatcttggaggcgtcgtagtttatagtctgattgcacaatttttgggtagtgctacaaaatatcttaaagaga-aca---acttaatatgcgactcaacc 39991977  T
Q  284 tagtaatctcttcggtgacagaaaaaatattttt-aactaattttgactatt 334  Q
    |||||||||||| ||||||   |||||||||||| |||||||||| ||||||    
T  39991978 tagtaatctctttggtgac--caaaaatatttttgaactaattttaactatt 39992027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 16421141 - 16421046
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||| |||||||| ||  | || ||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||    
T  16421141 acagttgtagctgggcttgttttatcctgtaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaatgagag 16421046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 31765998 - 31765903
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||||||| || |||||||| ||| | || ||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  31765998 acagttgtagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagag 31765903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 5271402 - 5271497
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||| ||| || |||||||| ||| | || |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||    
T  5271402 acagttgtagttggacttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagag 5271497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 168 - 257
Target Start/End: Original strand, 37264551 - 37264642
Alignment:
Q  168 ttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||| |||||||| ||| | || ||||||||||||||||| ||||| ||||||||||| |||||||||| |||||||||||||    
T  37264551 ttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcataattttgggcagtgccacgaaacgtcttaaagagag 37264642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 12823895 - 12823973
Alignment:
Q  180 tgttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||| ||| | || ||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||    
T  12823895 tgttttatcctggaggcggcgtggttgatagtttgtcttgcacaattttgggcagtgccacgaaatgtcttaaagagag 12823973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 13521992 - 13522070
Alignment:
Q  180 tgttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||| ||| | || |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||    
T  13521992 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagag 13522070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 31269143 - 31269051
Alignment:
Q  167 gttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||| || |||||||| ||| | || ||||||||||||||||| |||||||||||| |||| |||||||||| |||||||||||||    
T  31269143 gttgtagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacgaaacgtcttaaagagag 31269051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 164 - 254
Target Start/End: Original strand, 37259860 - 37259952
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaaga 254  Q
    ||||||||||||||||| |||||||| ||| | || ||||||||||||||||| ||||||||||||| | | |||||||||| ||||||||||    
T  37259860 acagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacgtcttaaaga 37259952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 229
Target Start/End: Complemental strand, 9931524 - 9931370
Alignment:
Q  73 gagtggtataaataccatattggagtggtcttagaaccatattggaatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgta 172  Q
    ||||||| | |||||||| ||||||||||||||  ||||||||  || ||||||||||| ||| ||||||| | ||||  |||| | | |||||||||||    
T  9931524 gagtggtcttaataccatgttggagtggtcttaacaccatatttcaaagtgtatttctaaaacggatcctacaatgcagcaggagtttgatacagttgta 9931425  T
Q  173 gctgggctgttttatcttggggacgtcgtggttgatagtctgcttgcacaattttgg 229  Q
     || | ||||||||||   | ||||  |||||||||||||| |||||||| ||||||    
T  9931424 acttgactgttttatc--agagacgctgtggttgatagtctacttgcacagttttgg 9931370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 42758774 - 42758833
Alignment:
Q  199 cgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||  ||||||||||||    
T  42758774 cgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacatcttaaagagag 42758833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 55251832 - 55251741
Alignment:
Q  163 tacagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaa 252  Q
    ||||||||||| |||||| |||||||| ||| |  | |||||||||||||||| ||||||||||||||| || |||||||||| ||||||||    
T  55251832 tacagttgtagttgggcttgttttatcctggaggtggcgtggttgatagtctgtcttgcacaattttggacagtgccacgaaacgtcttaaa 55251741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 5928202 - 5928297
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||| ||||||||| |||||||| ||| | ||  |||||||||||||||| ||||||||||||| ||| |||||| |||  ||||||||||||    
T  5928202 acagttgcagctgggcttgttttatcctggaggcggtgtggttgatagtctgccttgcacaattttgagcagtgccactaaacatcttaaagagag 5928297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 168 - 257
Target Start/End: Original strand, 8030463 - 8030554
Alignment:
Q  168 ttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||| |||||||| ||| | |  ||| |||||||||||  |||||||||||||||||| |||||| ||| |||||||||||||    
T  8030463 ttgtagctgggcttgttttatcctggaggcagcgttgttgatagtctatcttgcacaattttgggcagtgccacaaaacgtcttaaagagag 8030554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 8693823 - 8693728
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||| ||| |||||||| | | | || ||||||||||||| || |||||||||||||||| |  ||||||||| |||||||||||||    
T  8693823 acagttgtagctgagcttgttttatccttgaggcggcgtggttgatagtatgtcttgcacaattttgggtagcgccacgaaacgtcttaaagagag 8693728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 31729370 - 31729465
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||| |||||| || |||||||| ||| | || |||| ||||| |||||| ||||||||||||||| | |||||||||| |||||||||||||    
T  31729370 acagttgcagctggacttgttttatcctggaggcggcgtgattgattgtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagag 31729465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 200 - 257
Target Start/End: Complemental strand, 13059485 - 13059427
Alignment:
Q  200 gtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||| |||||||||||||  ||| |||||||||| |||||||||||||    
T  13059485 gtggttgatagtctgtcttgcacaattttatgcagtgccacgaaacgtcttaaagagag 13059427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 16953180 - 16953107
Alignment:
Q  180 tgttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaa 252  Q
    ||||||||| ||| | ||| |||||||||||||||| ||||||||||||||| | | |||||||| ||||||||    
T  16953180 tgttttatcctggaggcgttgtggttgatagtctgccttgcacaattttgggtagtaccacgaaacgtcttaaa 16953107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 32082091 - 32082168
Alignment:
Q  180 tgttttatcttggggacgtcgtggttgatagtctgcttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||| ||| | || |||||||||||||   ||||||||||||||| || ||||| ||||||||||||| ||||    
T  32082091 tgttttatcctggaggcggcgtggttgatagttgccttgcacaattttggacagtgccatgaaatgtcttaaaaagag 32082168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 2574441 - 2574386
Alignment:
Q  38 tagtatcatataagagtggtcttagtaccataatagagtggtataaataccatatt 93  Q
    ||||| |||||||| ||||||||||||| ||||||||||| ||| |||| ||||||    
T  2574441 tagtaccatataagtgtggtcttagtactataatagagtgatatcaatatcatatt 2574386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 19102089 - 19101994
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgctt-gcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||| ||| || |||||||| ||| | || |||||||||||||||| || ||||||||||| | | |||||||||| |||||||| ||||    
T  19102089 acagttgtagttggacttgttttatcctggaggcgacgtggttgatagtctgttttgcacaattttgagtagtgccacgaaacgtcttaaacagag 19101994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 12874634 - 12874556
Alignment:
Q  180 tgttttatcttggggacgtcgtggttgatagtctgctt-gcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||| ||| | || |||| ||||| |||||||| |||||||||| | || ||||||||| ||||||||||||||    
T  12874634 tgttttatcctggaggcggcgtgattgatggtctgctttgcacaattttagacagtgccacgaattgtcttaaagagag 12874556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 33468992 - 33469050
Alignment:
Q  199 cgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagaga 256  Q
    ||||||||| ||||||| |||||||| |||||||| |||||| ||| ||||||||||||    
T  33468992 cgtggttgacagtctgccttgcacaactttgggcagtgccacaaaacgtcttaaagaga 33469050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 51698012 - 51697934
Alignment:
Q  180 tgttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||| ||| | || |||||||||||||||| |||||||||||||| ||| || || |||| |||||||| ||||    
T  51698012 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagcagtgtcatgaaacgtcttaaaaagag 51697934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 51697072 - 51697019
Alignment:
Q  205 tgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||| ||||||||||||||||| ||||| |||| ||||||| |||||    
T  51697072 tgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaggagag 51697019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 653144 - 653061
Alignment:
Q  174 ctgggctgttttatcttggggacgtcgtggttgatagtct-gcttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||| ||| |||| |||||||| ||||||  |||||||||  ||||| | |||| ||||| |||||||||||||    
T  653144 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaa-attgggtagtgccgcgaaacgtcttaaagagag 653061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 254
Target Start/End: Complemental strand, 19106695 - 19106639
Alignment:
Q  199 cgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaaga 254  Q
    |||||||||||||| || ||||||||||||||||| ||| | |||| ||||||||||    
T  19106695 cgtggttgatagtcagccttgcacaattttgggcagtgctatgaaacgtcttaaaga 19106639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 181; Significance: 1e-97; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 17 - 345
Target Start/End: Complemental strand, 35129886 - 35129564
Alignment:
Q  17 aacaccatataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattg 116  Q
    |||||||||| ||| || || ||||| ||||||||| | |||||||||||||||||||||||||| ||||||||||| || ||||||||| ||||||||     
T  35129886 aacaccatattagagtggtcttagtaccatataagaatagtcttagtaccataatagagtggtatcaataccatattagaatggtcttagcaccatattt 35129787  T
Q  117 gaatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgct 216  Q
    ||| ||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||||||| ||  || ||||||||||||||||||||    
T  35129786 gaaggtgtatttctagaacagatcctatagtgcaaaaggactctgatacagttgtagctggactgttttatcctgatgatgtcgtggttgatagtctgct 35129687  T
Q  217 tgcacaattttgggcaatgccacgaaatgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttt 316  Q
    |||||||||||||||| ||||| |||| |||||||||    |||| |||||||||||||||||||  ||||||||| |||| |||| |  ||||||||||    
T  35129686 tgcacaattttgggcagtgccatgaaacgtcttaaag----agagcgacctagtctgcgactcagtatagtaatcttttcgatgacgg--aaaatatttt 35129593  T
Q  317 taactaattttgactattgttccaacaat 345  Q
    |||||||||||||||||||||||||||||    
T  35129592 taactaattttgactattgttccaacaat 35129564  T

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Target: chr6; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 17 - 341
Target Start/End: Original strand, 32814900 - 32815220
Alignment:
Q  17 aacaccatataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattg 116  Q
    |||||||||| ||| |  || ||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||  ||||||||||| ||||||||     
T  32814900 aacaccatattagagtagtcttagtaccatataagaatggtcttagtaccataatagagtggtatcaataccatattatagtggtcttagcaccatattt 32814999  T
Q  117 gaatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgct 216  Q
    ||| |||||||||||||||||||||||||||||||||| | | | ||||| ||||||||||||||||||||  |||||  ||||||||||||||||||||    
T  32815000 gaaggtgtatttctagaacagatcctatagtgcaatagaactttgatacatttgtagctgggctgttttatactgggggtgtcgtggttgatagtctgct 32815099  T
Q  217 tgcacaattttgggcaatgccacgaaatgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttt 316  Q
    |||||||||||||||| |||| ||||| ||||||||||| ||    ||||||||| |||| | ||||||||||||| || | ||||| ||||||||||||    
T  32815100 tgcacaattttgggcagtgccgcgaaacgtcttaaagag-ga---cgacctagtccgcgaataagcctagtaatctttttgatgacaaaaaaaatatttt 32815195  T
Q  317 taactaattttgactattgttccaa 341  Q
    ||| |||||||||||||||||||||    
T  32815196 taattaattttgactattgttccaa 32815220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 17 - 228
Target Start/End: Complemental strand, 14775841 - 14775631
Alignment:
Q  17 aacaccatataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattg 116  Q
    |||||||||| ||| || |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||     
T  14775841 aacaccatattagagtggtcctagtaccatataagagtggtcttagtaccataatagagtggtatcaataccatattggagtggttttagcaccatattt 14775742  T
Q  117 gaatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgct 216  Q
     || |||| ||||||||||||||||||||||||||||||| | | ||||||| ||||||| ||||||||||| ||||| | |||||||||||||||||||    
T  14775741 aaaggtgtctttctagaacagatcctatagtgcaataggactttgatacagtggtagctgagctgttttatcctgggg-catcgtggttgatagtctgct 14775643  T
Q  217 tgcacaattttg 228  Q
    ||||||||||||    
T  14775642 tgcacaattttg 14775631  T

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Target: chr6; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 101 - 344
Target Start/End: Complemental strand, 14041863 - 14041626
Alignment:
Q  101 tcttagaaccatattggaatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcg 200  Q
    |||||| ||||||||  || |||||||||||||||||||||||||||||||||||| | | ||||||||||| ||| ||||||||||||||| | |||||    
T  14041863 tcttagcaccatatttcaaggtgtatttctagaacagatcctatagtgcaataggactttgatacagttgtaactgagctgttttatcttggag-cgtcg 14041765  T
Q  201 tggttgatagtctgcttgcacaattttgggcaatgccacgaaatgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtg 300  Q
    ||||||||||  ||| ||||||||||| |||| || ||||||| || ||||    |||||| |||||| || |||||| || ||||||||||||||| ||    
T  14041764 tggttgatag-atgcatgcacaattttaggcagtgtcacgaaacgttttaa----agagagcgacctaatccgcgactaagtctagtaatctcttcgatg 14041670  T
Q  301 acagaaaaaatatttttaactaattttgactattgttccaacaa 344  Q
    ||| ||  | | |||| |||||||||||||||||||||||||||    
T  14041669 acaaaattatttttttaaactaattttgactattgttccaacaa 14041626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 44 - 153
Target Start/End: Complemental strand, 5496032 - 5495923
Alignment:
Q  44 catataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattggaatgtgtatttctagaacagatccta 143  Q
    ||||| |||||||||| | |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||  || || |||||||| ||||||| |||    
T  5496032 catattagagtggtctcattaccataatagagtggtagaaataccatattggagttgtcttaacaccatatttaaaggtatatttctataacagattcta 5495933  T
Q  144 tagtgcaata 153  Q
    ||||||||||    
T  5495932 tagtgcaata 5495923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 35 - 228
Target Start/End: Original strand, 29610784 - 29610964
Alignment:
Q  35 tcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattggaatgtgtatttctagaa 134  Q
    |||||||| |||||||||||| | ||||||||||||||||||||||| |||  |||||| |||||             ||| ||| ||||||||||| ||    
T  29610784 tcctagtaccatataagagtgattttagtaccataatagagtggtatcaatgtcatattagagtg-------------atttgaaggtgtatttctataa 29610870  T
Q  135 cagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgcttgcacaattttg 228  Q
    | ||||||| |||||| ||||| ||  | ||| | ||||||||||| ||||||| || || | |||||||||||||||||||||||||||||||    
T  29610871 cggatcctacagtgcagtaggactccgaaacaatcgtagctgggctattttatcctgaggtcatcgtggttgatagtctgcttgcacaattttg 29610964  T

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Target: chr6; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 164 - 254
Target Start/End: Original strand, 16836139 - 16836231
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaaga 254  Q
    ||||||||||||||||| |||||||| ||| | || ||||||||||||||||| ||| ||||||||||||| |||||||||| ||||||||||    
T  16836139 acagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgtacaattttgggcagtgccacgaaacgtcttaaaga 16836231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 11570732 - 11570827
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||| ||| |||||||| ||| | || |||||||||| |||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  11570732 acagttgtagctgagcttgttttatcctggaggcggcgtggttgattgtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagag 11570827  T

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Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 21309143 - 21309048
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||| ||| |||||||| ||| | || ||||||||||||||||| ||||||||||||||||| ||||| |||| |||||||||||||    
T  21309143 acagttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgcattgcacaattttgggcagtgccatgaaacgtcttaaagagag 21309048  T

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Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 68 - 228
Target Start/End: Original strand, 32551407 - 32551567
Alignment:
Q  68 taatagagtggtataaataccatattggagtggtcttagaaccatattggaatgtgtatttctagaacagatcctatagtgcaataggattcttatacag 167  Q
    |||||||||| ||| |||||||||||| | ||||||||    ||||||  || || ||||| |||||| |||| || | | |||||||| |   ||||||    
T  32551407 taatagagtgatatcaataccatattgaaatggtcttaacgtcatatttaaaggtatatttttagaacggatcttacaatacaataggagttcgatacag 32551506  T
Q  168 ttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgcttgcacaattttg 228  Q
    |||||||  | |||||||||| || || ||| |||||||||||||||||||||||||||||    
T  32551507 ttgtagccagactgttttatcatgagggcgttgtggttgatagtctgcttgcacaattttg 32551567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 6407843 - 6407938
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgctt-gcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||| ||| |||||||| ||| | || ||||||||||||||||||| | ||||||||||||| |||||||||| ||||| |||||||    
T  6407843 acagttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgctttgtacaattttgggcagtgccacgaaacgtcttcaagagag 6407938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 12689083 - 12688988
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||| ||| |||||||| ||| |||| |||||||||||||||| |||||||||||||||||| |  ||| ||| |||||||||||||    
T  12689083 acagttgtagctgagcttgttttatcctggagacggcgtggttgatagtctgccttgcacaattttgggcagtatcacaaaacgtcttaaagagag 12688988  T

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Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 33687603 - 33687681
Alignment:
Q  180 tgttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||| ||| |||| | |||||||||||||| ||||||||||||||| || |||||||||| |||||||||||||    
T  33687603 tgttttatcctggagacggcatggttgatagtctgtcttgcacaattttggccagtgccacgaaacgtcttaaagagag 33687681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 344
Target Start/End: Complemental strand, 14775613 - 14775533
Alignment:
Q  263 gacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttttaactaattttgactattgttccaacaa 344  Q
    |||||| || ||||||||||||  |||||||||  || ||||||||| |||||||||||||||||||||||| |||||||||    
T  14775613 gacctattccgcgactcagccttataatctctttagttacagaaaaa-tatttttaactaattttgactattattccaacaa 14775533  T

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Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 279 - 343
Target Start/End: Original strand, 7499228 - 7499291
Alignment:
Q  279 cagcctagtaatctcttcggtgacagaaaaaatatttttaactaattttgactattgttccaaca 343  Q
    ||||||||||||||||||| |||||||||| || ||||||||||||||| | |||||||||||||    
T  7499228 cagcctagtaatctcttcgatgacagaaaatat-tttttaactaattttcattattgttccaaca 7499291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 164 - 254
Target Start/End: Original strand, 17964542 - 17964634
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaaga 254  Q
    ||||||| ||||||||| |||||||| ||| | || ||||||||||||||||| ||||||||||||||  | |||||||||| ||||||||||    
T  17964542 acagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggatagtgccacgaaacgtcttaaaga 17964634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 2700089 - 2700184
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||| |||||| |||||||| |||   || |||||||||||||||| ||||||||||||||  || |||||||||| |||||||||||||    
T  2700089 acagttgtagttgggcttgttttatcctggaagcggcgtggttgatagtctgtcttgcacaattttgaacagtgccacgaaacgtcttaaagagag 2700184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 390 - 448
Target Start/End: Complemental strand, 31035337 - 31035277
Alignment:
Q  390 taaaaatttaagtgtgt--ctcggtcctctgttgtaggcctttgttggtagaaattcatat 448  Q
    |||||||||||||||||  ||||||||||| |||||||| |||| ||||||||||||||||    
T  31035337 taaaaatttaagtgtgtacctcggtcctctattgtaggcatttgctggtagaaattcatat 31035277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 19674385 - 19674330
Alignment:
Q  203 gttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||||| |||||||||||||||||| ||||| |||| |||||||||||||    
T  19674385 gttgatagtctgtcttgcacaattttgggcagtgccatgaaacgtcttaaagagag 19674330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 453
Target Start/End: Complemental strand, 31045539 - 31045474
Alignment:
Q  390 taaaaatttaagtgtgt--ctcggtcctctgttgtaggcctttgttggtagaaattcatatctttt 453  Q
    ||||||||||||| |||  |||||||||||||||||  |||||| |||||| ||||||||||||||    
T  31045539 taaaaatttaagtttgtacctcggtcctctgttgtattcctttgctggtagcaattcatatctttt 31045474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 306 - 343
Target Start/End: Original strand, 29610978 - 29611015
Alignment:
Q  306 aaaaatatttttaactaattttgactattgttccaaca 343  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  29610978 aaaaataattttaactaattttgactattgttccaaca 29611015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 29892244 - 29892339
Alignment:
Q  164 acagttgtagctgggct-gttttatcttgg-ggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||||||| || |||||||| ||| ||| || |||||||||||| || |||||||||||||||||| |||||| |||  ||||||||||||    
T  29892244 acagttgtagctggacttgttttatcctggaggaggt-gtggttgatagtttgtcttgcacaattttgggcagtgccaccaaacttcttaaagagag 29892339  T

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Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 24589147 - 24589242
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtct-gcttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||| ||| || |||||||| ||| |||| |||||||||||||||  |||||||||||||||  | || ||||||| || ||||||||||    
T  24589147 acagttgtagttggacttgttttatcctggagacggcgtggttgatagtctatcttgcacaattttggaaagtgtcacgaaacgttttaaagagag 24589242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 8747877 - 8747799
Alignment:
Q  180 tgttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||| ||| | || ||| |||||||| ||| |||||||||||||||||| || |||| || |||||||||||||    
T  8747877 tgttttatcctggaggcggcgttgttgatagcctgtcttgcacaattttgggcagtgtcacggaacgtcttaaagagag 8747799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 256
Target Start/End: Original strand, 11614092 - 11614169
Alignment:
Q  180 tgttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagaga 256  Q
    ||||||||| ||| | || |||||||||||||||| |||||||||||||| ||| |||||  ||| || |||||||||    
T  11614092 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagcagtgccataaaacgttttaaagaga 11614169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 19478249 - 19478166
Alignment:
Q  174 ctgggctgttttatcttggggacgtcgtggttgatagtct-gcttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||| ||| |||| |||||||| ||||||  |||||||||  ||||| | |||| ||||| |||||||||||||    
T  19478249 ctgggctgttttatcgtggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgccgcgaaacgtcttaaagagag 19478166  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 31045672 - 31045636
Alignment:
Q  360 caattcctatgaattgtcaaaatattcatataaaaat 396  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  31045672 caattcctatgaattgtcgaaatattcatatataaat 31045636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 180; Significance: 5e-97; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 59 - 343
Target Start/End: Original strand, 33380800 - 33381080
Alignment:
Q  59 ttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattggaatgtgtatttctagaacagatcctatagtgcaataggatt 158  Q
    |||||||||||||||||||||||   ||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||| || |    
T  33380800 ttagtaccataatagagtggtatcggtaccatattggagtggtttaagaaccatattggaaggtgtatttctagaacagatcctatagtgcaatatgact 33380899  T
Q  159 cttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgcttgcacaattttgggcaatgccacgaaatgtcttaaagagaga 258  Q
    ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||| |||||||||||||     
T  33380900 ctggtacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgcttgcacaattttgagcagtgtcacgaaacgtcttaaagagagc 33380999  T
Q  259 gagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttttaactaattttgactattgttccaaca 343  Q
    ||    ||||||   ||||||||||||||||||| ||| |||| | |||||||||||||||||||||||||||||||||||||||    
T  33381000 ga----cctagtacacgactcagcctagtaatcttttctgtgataaaaaaaatatttttaactaattttgactattgttccaaca 33381080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 18 - 343
Target Start/End: Original strand, 27761678 - 27761996
Alignment:
Q  18 acaccatataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattgg 117  Q
    ||||||||||||| || | |||||| ||||||||||||||||||||| ||||||||| |||||| |||||||||||||| ||||||||| |||||||||     
T  27761678 acaccatataagagtggttctagtaccatataagagtggtcttagtatcataatagaatggtatcaataccatattggaatggtcttagcaccatattga 27761777  T
Q  118 aatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgctt 217  Q
    || ||||||||||||||||||||||||||||||||| |  ||| ||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  27761778 aaggtgtatttctagaacagatcctatagtgcaatatg-ctctgatacaattgtagctggactgttttatcctggggacgtcgtggttgatagtctgctt 27761876  T
Q  218 gcacaattttgggcaatgccacgaaatgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatattttt 317  Q
    |||||||||||| || |||||||||| || ||||    |||||| |||||||||||||||||| ||||||||| |||||  ||||| |||| || |||||    
T  27761877 gcacaattttggacagtgccacgaaacgttttaa----agagagtgacctagtctgcgactcaacctagtaatatcttcaatgaca-aaaatat-ttttt 27761970  T
Q  318 aactaattttgactattgttccaaca 343  Q
    ||||||| ||||||||||||||||||    
T  27761971 aactaatgttgactattgttccaaca 27761996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 17 - 343
Target Start/End: Original strand, 23193060 - 23193381
Alignment:
Q  17 aacaccatataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattg 116  Q
    |||||||||| ||| || || ||||| ||||||||| ||||||||||||||||||| | |||||| ||||||||||| |||||||||||| ||||||||     
T  23193060 aacaccatattagagtggtcttagtaccatataagaatggtcttagtaccataataaaatggtatcaataccatattagagtggtcttagcaccatattt 23193159  T
Q  117 gaatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgct 216  Q
    ||| |||||||||||||||||||||||||||||||||||| ||| | ||| |||||| || | ||||||||| ||||| |||||||||||||||||||||    
T  23193160 gaaggtgtatttctagaacagatcctatagtgcaataggactctaagacatttgtagatgagttgttttatcatgggggcgtcgtggttgatagtctgct 23193259  T
Q  217 tgcacaattttgggcaatgccacgaaatgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttt 316  Q
    |||| |||||||||   ||||| |||| |||||    | |||||| ||||||||| |||||||||| |||||||||||||| |||||| |||||||||||    
T  23193260 tgcataattttgggttgtgccatgaaacgtctt----atagagagcgacctagtccgcgactcagcgtagtaatctcttcgatgacag-aaaaatatttt 23193354  T
Q  317 taactaattttgactattgttccaaca 343  Q
    |||||||||||||||||||||||||||    
T  23193355 taactaattttgactattgttccaaca 23193381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 17 - 338
Target Start/End: Complemental strand, 36724966 - 36724650
Alignment:
Q  17 aacaccatataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattg 116  Q
    |||||||||| | | || || ||||| ||||||||| |||||||||| ||||||||||||||||| ||||||||||| |||||||||||| ||||||||     
T  36724966 aacaccatattaaagtggtcttagtaccatataagaatggtcttagtgccataatagagtggtatcaataccatattagagtggtcttagcaccatattt 36724867  T
Q  117 gaatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgct 216  Q
    ||| |||||||||||||||| |||||||| |||||||||| | | ||||| || |||||||||||||||||||||||| ||||||||||||| |||||||    
T  36724866 gaaggtgtatttctagaacatatcctataatgcaataggactttgatacaattatagctgggctgttttatcttgggggcgtcgtggttgattgtctgct 36724767  T
Q  217 tgcacaattttgggcaatgccacgaaatgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttt 316  Q
    |||||||||||||| | |||||  ||| ||||||||||||| ||    |||||||   ||||||||||||||||||||||||||||| |||| || ||||    
T  36724766 tgcacaattttgggtagtgccataaaacgtcttaaagagagcga----cctagtccatgactcagcctagtaatctcttcggtgaca-aaaatatttttt 36724672  T
Q  317 taactaattttgactattgttc 338  Q
    ||||||||||||||||||||||    
T  36724671 taactaattttgactattgttc 36724650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 17 - 345
Target Start/End: Complemental strand, 12906411 - 12906089
Alignment:
Q  17 aacaccatataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattg 116  Q
    |||||||||| ||| || || || || ||||||||| ||||||||||||||||||| |||||||| ||||||||||| |||||||||||| ||||||||     
T  12906411 aacaccatattagagtggtcttaataccatataagaatggtcttagtaccataataaagtggtatcaataccatattagagtggtcttagcaccatattt 12906312  T
Q  117 gaatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgct 216  Q
    ||| ||||| || ||||||| ||||||| ||||||||||| ||| ||||| ||||| || |||||||||||| ||||| |||||||||||||||||||||    
T  12906311 gaaggtgtacttttagaacatatcctattgtgcaataggactctgatacaattgtaacttggctgttttatcctgggg-cgtcgtggttgatagtctgct 12906213  T
Q  217 tgcacaattttgggcaatgccacgaaatgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttt 316  Q
    |||||||||||||||| |||||||||| |||||||    |||||| ||||||||  |||||| |||||||||||||||||||| ||| |||| || ||||    
T  12906212 tgcacaattttgggcagtgccacgaaacgtcttaa----agagagcgacctagttcgcgactaagcctagtaatctcttcggtaaca-aaaatat-tttt 12906119  T
Q  317 taactaa-ttttgactattgttccaacaat 345  Q
    ||||||| ||||||||||||||||||||||    
T  12906118 taactaatttttgactattgttccaacaat 12906089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 17 - 343
Target Start/End: Complemental strand, 31064213 - 31063893
Alignment:
Q  17 aacaccatataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattg 116  Q
    |||||||||| ||| || |||||||| |||||||||||||||||||||||||||||||||| ||| ||| | ||||| || ||||||||| ||||||||     
T  31064213 aacaccatattagaatggtcctagtaccatataagagtggtcttagtaccataatagagtgctatcaatgcaatattagaatggtcttagcaccatattt 31064114  T
Q  117 gaatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgct 216  Q
      | ||||||||| ||||||||||||||||||||||| || ||| ||| |||||| |||||||||||||||| | |||||||||||||||||||| ||||    
T  31064113 tgaagtgtatttccagaacagatcctatagtgcaataagactctgatatagttgttgctgggctgttttatcct-gggacgtcgtggttgatagtttgct 31064015  T
Q  217 tgcacaattttgggcaatgccacgaaatgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttt 316  Q
    || ||||||||||  | ||||||||||  ||||||    |||||| |||||||||  ||||||||||||||||||||||||||||||  ||| || ||||    
T  31064014 tgaacaattttggaaagtgccacgaaacctcttaa----agagagcgacctagtccacgactcagcctagtaatctcttcggtgacaagaaatat-tttt 31063920  T
Q  317 taactaattttgactattgttccaaca 343  Q
    |||||||||||||||||||||||||||    
T  31063919 taactaattttgactattgttccaaca 31063893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 45 - 345
Target Start/End: Original strand, 2493685 - 2493978
Alignment:
Q  45 atataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattggaatgtgtatttctagaacagatcctat 144  Q
    |||||||| |||||||| || ||| |||||||||||| ||||||||||| || ||||||||| |||||||| |||||||||||||||||||||| |||||    
T  2493685 atataagaatggtcttaatatcatgatagagtggtatcaataccatattagaatggtcttagcaccatatttgaatgtgtatttctagaacagaccctat 2493784  T
Q  145 agtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgcttgcacaattttgggcaatgccacgaaat 244  Q
    |||||||||||||  | ||||  ||||||||| | ||||||||| ||||| || ||||||||||||| |||||||||||||||||||| ||||||||||     
T  2493785 agtgcaataggat--tgatacgattgtagctgagttgttttatcctgggggcgccgtggttgatagtttgcttgcacaattttgggcagtgccacgaaac 2493882  T
Q  245 gtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttttaactaattttgactattgttccaacaa 344  Q
    |||||||    |||||| |||||||| ||||||||| ||||||||||||||||||  ||| | |||||||||||||||||||||| ||||||||||||||    
T  2493883 gtcttaa----agagagcgacctagtttgcgactcaacctagtaatctcttcggttgcag-ataaatatttttaactaattttgattattgttccaacaa 2493977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 44 - 341
Target Start/End: Original strand, 24159663 - 24159954
Alignment:
Q  44 catataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattggaatgtgtatttctagaacagatccta 143  Q
    ||||||||| || || ||||||||||  |||||||| | | ||||||| | ||||||| |||||||||||| |||| |||||||||||||||||||| ||    
T  24159663 catataagactgatcctagtaccatataagagtggtcttagtaccataatagagtggttttagaaccatatcggaaggtgtatttctagaacagatcata 24159762  T
Q  144 tagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgcttgcacaattttgggcaatgccacgaaa 243  Q
    ||||||||||| | | | ||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |   ||||||    
T  24159763 tagtgcaatagaactatgatacagttgtagctgagctgttttatcctggggacgtcgtcgttgatagtctgcttgcacaattttgggcagtattacgaaa 24159862  T
Q  244 tgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttttaactaattttgactattgttccaa 341  Q
     |||||||    |||||| ||||||||| ||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||| ||||||    
T  24159863 cgtcttaa----agagagcgacctagtccgcgactcagcctagtaatctcttcggtgatag--aaaatatttttaactaattttgactattattccaa 24159954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 17 - 256
Target Start/End: Original strand, 25661660 - 25661899
Alignment:
Q  17 aacaccatataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattg 116  Q
    |||||||||| ||| || |||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||  |||||||     
T  25661660 aacaccatattagagtggtcctagtaccatataagagtggtcttagtaccataataaagtggtatatataccatattggagtggtcttagccccatattt 25661759  T
Q  117 gaatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgct 216  Q
    ||| |||||||||||||||| ||||||||||||||||||| ||| ||||| ||||||||| ||||||||||| |  || |||| ||||||||||||| ||    
T  25661760 gaaggtgtatttctagaacatatcctatagtgcaataggactctgatacaattgtagctgagctgttttatcctaagggcgtcatggttgatagtctact 25661859  T
Q  217 tgcacaattttgggcaatgccacgaaatgtcttaaagaga 256  Q
    |||||||||||||| | |||||| ||| ||||||||||||    
T  25661860 tgcacaattttgggtagtgccacaaaacgtcttaaagaga 25661899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 18 - 243
Target Start/End: Original strand, 28857901 - 28858126
Alignment:
Q  18 acaccatataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattgg 117  Q
    ||||||||||||| || || |||||||||||||||||||||||| |||||||| |||||| ||| |||| |||||| ||||||| |||  | ||||||||    
T  28857901 acaccatataagagtggtcatagtatcatataagagtggtcttaataccataacagagtgatatcaatatcatattagagtggttttaacatcatattgg 28858000  T
Q  118 aatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgctt 217  Q
    ||  |||||||||||| |||||||||||||||||||||| | | |||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||    
T  28858001 aagatgtatttctagagcagatcctatagtgcaataggactttgatacagttttagctgagctattttatcctggggacgtcgtggttgatagtctgctt 28858100  T
Q  218 gcacaattttgggcaatgccacgaaa 243  Q
    ||||||||||| ||||||||||||||    
T  28858101 gcacaattttgagcaatgccacgaaa 28858126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 17 - 336
Target Start/End: Complemental strand, 32987499 - 32987185
Alignment:
Q  17 aacaccatataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatat-t 115  Q
    |||||| ||| ||| || ||||||||   ||| |||||| |||| |||||||||||||||||||| ||||||||||||||||| |||||| ||||||| |    
T  32987499 aacaccgtattagagtggtcctagtacattattagagtgatctttgtaccataatagagtggtatcaataccatattggagtgatcttagcaccatatat 32987400  T
Q  116 ggaatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgc 215  Q
     |||  |||||||||| || ||||| ||||||||||||||| ||| ||||| |||||| ||| ||||||| || | ||| |||| || ||||||||||||    
T  32987399 tgaagatgtatttctaaaagagatcatatagtgcaataggactctgatacaattgtagttggactgttttctcctaggggcgtcatgattgatagtctgc 32987300  T
Q  216 ttgcacaattttgggcaatgccacgaaatgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatattt 315  Q
    |||||||||||| |||| |||||| |||  ||||||||    |||| ||||||||| |||||||||| |||||||||||||| ||||  ||||| |||||    
T  32987299 ttgcacaattttaggcagtgccacaaaacatcttaaag----agagtgacctagtccgcgactcagcttagtaatctcttcgatgac--aaaaactattt 32987206  T
Q  316 ttaactaattttgactattgt 336  Q
    |||||||||||||||||||||    
T  32987205 ttaactaattttgactattgt 32987185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 163 - 257
Target Start/End: Original strand, 26927704 - 26927800
Alignment:
Q  163 tacagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||||||||||| ||||||| || | | || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  26927704 tacagttgtagctgggcttgttttattttagaggcggcgtggttgatagtctgccttgcacaattttgggcaatgccacgaaacgtcttaaagagag 26927800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 24159659 - 24159720
Alignment:
Q  18 acaccatataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggt 79  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  24159659 acaccatataagactgatcctagtaccatataagagtggtcttagtaccataatagagtggt 24159720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 19798996 - 19799091
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||| |||||||| ||| | || |||||||||||||||| |||||||||||||||  | |||||||||| |||||||||||||    
T  19798996 acagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttggatagtgccacgaaacgtcttaaagagag 19799091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 164 - 252
Target Start/End: Original strand, 51041446 - 51041535
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaa 252  Q
    ||||||||||||||||| |||||||||||| | || |||||||||||||||| ||||||||| |||||||| |||||||||| ||||||||    
T  51041446 acagttgtagctgggcttgttttatcttggaggcggcgtggttgatagtctgccttgcacaa-tttgggcagtgccacgaaacgtcttaaa 51041535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 180 - 256
Target Start/End: Original strand, 33301180 - 33301257
Alignment:
Q  180 tgttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagaga 256  Q
    ||||||||| ||| | || |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||    
T  33301180 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagaga 33301257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 47451208 - 47451303
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||| || ||| |||||||||||| | || |||||||||||||||| ||||||||||||| |||| ||||| |||| |||||||||||||    
T  47451208 acagttgtagttgagcttgttttatcttggaggcggcgtggttgatagtctgtcttgcacaatttttggcagtgccatgaaacgtcttaaagagag 47451303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 47455369 - 47455464
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||||| |||| |||||||| ||| | || ||||||||||| |||| ||||||||||||||| || |||||||||| |||||||||||||    
T  47455369 acagttgtagctaggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttggacattgccacgaaacgtcttaaagagag 47455464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 168 - 257
Target Start/End: Original strand, 23192805 - 23192895
Alignment:
Q  168 ttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||  ||||||||| ||| |  | ||||||||||||||||| ||| ||||||||||||| |||||||||| |||||||||||||    
T  23192805 ttgtagctggcttgttttatcctggaggaggcgtggttgatagtctgccttgtacaattttgggcagtgccacgaaacgtcttaaagagag 23192895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 12260077 - 12260013
Alignment:
Q  194 gacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||| |||||||||||||||| |||||||||||||||||| || ||||||| |||||||||||||    
T  12260077 gacggcgtggttgatagtctgtcttgcacaattttgggcagtgtcacgaaacgtcttaaagagag 12260013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 38620804 - 38620710
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||| ||| || |||||||||||| | || ||| |||||||||||| ||||||||||||||| ||||| ||||||| |||||||||||||    
T  38620804 acagttgtagttggacttgttttatcttggaggcggcgtagttgatagtctgccttgcacaattttggacaatg-cacgaaacgtcttaaagagag 38620710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 199 - 252
Target Start/End: Original strand, 18784568 - 18784622
Alignment:
Q  199 cgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaa 252  Q
    ||||||||||||||||| |||||||||||| |||| |||||||||||||||||||    
T  18784568 cgtggttgatagtctgccttgcacaattttaggcagtgccacgaaatgtcttaaa 18784622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 257
Target Start/End: Complemental strand, 3094187 - 3094131
Alignment:
Q  202 ggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||||||| ||||||||||||||||| ||||| |||| |||||||||||||    
T  3094187 ggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagag 3094131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 39588386 - 39588445
Alignment:
Q  199 cgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||| ||||||||| ||||||||||||||| || |||||||||| |||||||||||||    
T  39588386 cgtggtagatagtctgtcttgcacaattttggacagtgccacgaaacgtcttaaagagag 39588445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 40166052 - 40165997
Alignment:
Q  203 gttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||| |||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  40166052 gttgttagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagag 40165997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 25855229 - 25855188
Alignment:
Q  216 ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||| |||||||||| |||||||||||||    
T  25855229 ttgcacaattttgggcagtgccacgaaacgtcttaaagagag 25855188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 343
Target Start/End: Original strand, 28858157 - 28858189
Alignment:
Q  311 tatttttaactaattttgactattgttccaaca 343  Q
    |||||||||||||||||||||||||||||||||    
T  28858157 tatttttaactaattttgactattgttccaaca 28858189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 257
Target Start/End: Complemental strand, 10135532 - 10135473
Alignment:
Q  199 cgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||| |||||| |||||||||||| || | |||||||||| |||||||||||||    
T  10135532 cgtggttgattgtctgccttgcacaattttaggtagtgccacgaaacgtcttaaagagag 10135473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 16649596 - 16649690
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||||||| || ||||||||  || | || |||||||||||||||  ||||||||||||||| || |||||| ||| |||||||||||||    
T  16649596 acagttgtagctggacttgttttatcccggaggcggcgtggttgatagtctatcttgcacaattttggacagtgccac-aaacgtcttaaagagag 16649690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 23489500 - 23489567
Alignment:
Q  162 atacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgcttgcacaattttgg 229  Q
    |||||||||||| || | |||||||||||| |||||||||| ||||| |||| |||||| ||| ||||    
T  23489500 atacagttgtagttgagttgttttatcttgaggacgtcgtgattgattgtctacttgcataatgttgg 23489567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 226
Target Start/End: Complemental strand, 43242846 - 43242748
Alignment:
Q  127 ttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgcttgcacaattt 226  Q
    ||||||||| ||||||| ||| || ||||||||| ||| |||||||||||   |||||||| ||||  |||| ||||||| |||| ||||| ||||||||    
T  43242846 ttctagaacggatcctacagttcagtaggattctgatatagttgtagctgatttgttttattttggaaacgt-gtggttgctagtatgctttcacaattt 43242748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 243
Target Start/End: Complemental strand, 8138051 - 8137970
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaa 243  Q
    ||||||||||||| ||| |||||||| ||| | ||   ||||||||||||||| |||||||| ||| |||||||||||||||    
T  8138051 acagttgtagctgagcttgttttatcctggaggcgatatggttgatagtctgccttgcacaactttaggcaatgccacgaaa 8137970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 19309511 - 19309568
Alignment:
Q  130 tagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttat 187  Q
    ||||||| ||||||||||||||||||| | | ||||| |||||| |||||| ||||||    
T  19309511 tagaacatatcctatagtgcaataggactttgatacaattgtagttgggctcttttat 19309568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 257
Target Start/End: Original strand, 39747159 - 39747242
Alignment:
Q  174 ctgggctgttttatcttggggacgtcgtggttgatagtct-gcttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||| ||| |||| |||||||| ||||||  |||||||||  ||||| | |||| ||||| |||||||||||||    
T  39747159 ctgggctgttttatcctggagacgacgtggttgctagtctaccttgcacaa-cttgggtagtgccgcgaaacgtcttaaagagag 39747242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 173; Significance: 8e-93; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 17 - 341
Target Start/End: Original strand, 48435666 - 48435983
Alignment:
Q  17 aacaccatataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattg 116  Q
    |||||||||| ||| || |  |||||||||||| || |||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||     
T  48435666 aacaccatattagagtggttttagtatcatata-gaatggtcttagtaccataatagagtggtatcaataccatattagagtggtcttagcaccatattt 48435764  T
Q  117 gaatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgct 216  Q
    ||| ||||||||||| |||||||||| || |||||||||| ||| ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  48435765 gaaggtgtatttctaaaacagatcctttaatgcaataggactctgatacaattgtagctgagctgttttatcctggggacgtcgtggttgatagtctgct 48435864  T
Q  217 tgcacaattttgggcaatgccacgaaatgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttt 316  Q
    ||||| ||||||  || || ||||||| |||||||    |||||| ||||||||| |||||||||||||||||||||||||||||| |  ||||||||||    
T  48435865 tgcactattttgaacagtgtcacgaaacgtcttaa----agagagcgacctagtccgcgactcagcctagtaatctcttcggtgacgg--aaaatatttt 48435958  T
Q  317 taactaattttgactattgttccaa 341  Q
    ||||||||||||| |||||||||||    
T  48435959 taactaattttgagtattgttccaa 48435983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 20 - 344
Target Start/End: Complemental strand, 16983246 - 16982929
Alignment:
Q  20 accatataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattggaa 119  Q
    ||||||||||| || |||||||| |||||||   ||||| |||||||||||||||||||||| |||| |||||| |||||||||||| |||||||| |||    
T  16983246 accatataagaatggtcctagtaccatataa---tggtcctagtaccataatagagtggtatcaatatcatattagagtggtcttagcaccatatttgaa 16983150  T
Q  120 tgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgcttgc 219  Q
     |||||||||||||||||||||||||||||||||||| | | ||||||||||||||||| ||||||||| ||||||| |||||||||||| ||| ||| |    
T  16983149 ggtgtatttctagaacagatcctatagtgcaataggactttgatacagttgtagctgggttgttttatcctggggacatcgtggttgatattcttctttc 16983050  T
Q  220 acaattttgggcaatgccacgaaatgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttttaa 319  Q
    |||||||||| || || || |||| |||||||    | |||| ||||||||| |||| |||||||| |||| |||||||||||| ||  | | |||||||    
T  16983049 acaattttggacagtgtcatgaaacgtcttaa----aaagagcgacctagtccgcgaatcagcctactaatatcttcggtgacaaaattattttttttaa 16982954  T
Q  320 ctaattttgactattgttccaacaa 344  Q
    |||||||||||||||||||||||||    
T  16982953 ctaattttgactattgttccaacaa 16982929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 162 - 345
Target Start/End: Complemental strand, 48432521 - 48432344
Alignment:
Q  162 atacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgcttgcacaattttgggcaatgccacgaaatgtcttaaagagagagag 261  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||| ||| |||||||||    ||||    
T  48432521 atacagttgtagctaggctgttttatcttggggacgtcgtggttgatagtctgttttcacaattttgggcagtgccacaaaacgtcttaaag----agag 48432426  T
Q  262 ggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttttaactaattttgactattgttccaacaat 345  Q
     ||||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||| |||||||    
T  48432425 cgacctagtccgcgactcagcctagtaatctcttcggtgacag--aaagtatttttaactaattttgactattgttgcaacaat 48432344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 44 - 337
Target Start/End: Original strand, 12156345 - 12156633
Alignment:
Q  44 catataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattggaatgtgtatttctagaacagatccta 143  Q
    ||||||||||||| |||||||||||||||||||| | | ||||||||||| |||||||||||| |||||||| ||| ||||||||||||| |||||| ||    
T  12156345 catataagagtgggcttagtaccataatagagtgatgtcaataccatattagagtggtcttagcaccatattagaaggtgtatttctagatcagatcata 12156444  T
Q  144 tagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgcttg---cacaattttgggcaatgccacg 240  Q
    |||| ||||| || ||| |||| |||| | |||| |||||||||| |||||||||||||||||||||||||||||    ||||||||| | | || || |    
T  12156445 tagtacaatatgactctgatacggttgcaactggactgttttatcatggggacgtcgtggttgatagtctgcttgtacaacaattttgagtagtgtcatg 12156544  T
Q  241 aaatgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttttaactaattttgactattgtt 337  Q
    ||| ||||||||     ||||  | |||||| ||||| || |||||||||||||| ||||||  |||  || |||||||||||||||||||||||||    
T  12156545 aaacgtcttaaa-----agagaaatctagtccgcgacacaacctagtaatctctttggtgac--aaactat-tttttaactaattttgactattgtt 12156633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 171 - 343
Target Start/End: Complemental strand, 4662288 - 4662120
Alignment:
Q  171 tagctgggctgttttatcttggggacgtcgtggttgatagtctgcttgcacaattttgggcaatgccacgaaatgtcttaaagagagagagggacctagt 270  Q
    ||||||| |||||||||| |||||||||| |||||||||||||||||||| ||||||||||| | |||| ||| ||||||    ||||||| ||||||||    
T  4662288 tagctggactgttttatcctggggacgtcatggttgatagtctgcttgcataattttgggcatttccactaaacgtctta----gagagagcgacctagt 4662193  T
Q  271 ctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttttaactaattttgactattgttccaaca 343  Q
    |  ||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  4662192 ccacgactcagcgtggtaatctcttcggtgacaaaaaaaatatttttaactaattttgactattattccaaca 4662120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 48432138 - 48432277
Alignment:
Q  17 aacaccatataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattg 116  Q
    |||||||||| | | || || ||||| ||||||||| ||||||| |||||||||||||||||||| ||||||||||| |||||||||||  ||||||||     
T  48432138 aacaccatattatagtggtcttagtaccatataagaatggtcttggtaccataatagagtggtatcaataccatattagagtggtcttaacaccatattt 48432237  T
Q  117 gaatgtgtatttctagaacagatcctatagtgcaatagga 156  Q
    ||| ||||||||||||||||||||||| ||||||||||||    
T  48432238 gaaggtgtatttctagaacagatcctacagtgcaatagga 48432277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 164 - 255
Target Start/End: Original strand, 32474663 - 32474756
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagag 255  Q
    ||||||||||||||||| |||||||| ||| |||| |||||||||||||||| |||||||||||||||||| |||||||||| |||||| ||||    
T  32474663 acagttgtagctgggcttgttttatcctggagacggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttagagag 32474756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 3672696 - 3672601
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||| |||||||| ||| | || ||||||||||||||||| ||||||||||||||||| ||||| |||| |||||||||||||    
T  3672696 acagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagag 3672601  T

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Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 3692728 - 3692633
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||| |||||||| ||| | || ||||||||||||||||| ||||||||||||||||| ||||| |||| |||||||||||||    
T  3692728 acagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagag 3692633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 23666106 - 23666201
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||| ||||||||| |||||||| ||| | || ||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  23666106 acagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagag 23666201  T

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Target: chr3; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 24038354 - 24038449
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||| ||||||||| |||||||| ||| | || ||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  24038354 acagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagag 24038449  T

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Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 39775711 - 39775806
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||| ||| |||||||| ||| | || ||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  39775711 acagttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagag 39775806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 78 - 302
Target Start/End: Complemental strand, 21100260 - 21100041
Alignment:
Q  78 gtataaataccatattggagtggtcttagaaccatattggaatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgg 177  Q
    |||| |||||||||||||||||  |||   |||| ||  ||| |||||||||||||||||||| || |   || || || ||  ||||| |||||||| |    
T  21100260 gtatcaataccatattggagtgaccttgacaccacatatgaaggtgtatttctagaacagatcttacaacacagtaagactccgatacaattgtagctag 21100161  T
Q  178 gctgttttatcttggggacgtcgtggttgatagtctgcttgcacaattttgggcaatgccacgaaatgtcttaaagagagagagggacctagtctgcgac 277  Q
     |||||||||||||||| |||| ||||| |||||||| |||||||||||| |||| |  || |||| ||||||||     | || ||| || || |||||    
T  21100160 actgttttatcttgggggcgtcatggttaatagtctgtttgcacaatttttggcattttcatgaaaagtcttaaa-----atagcgacataatccgcgac 21100066  T
Q  278 tcagcctagtaatctcttcggtgac 302  Q
    ||||||||||| |||||||||||||    
T  21100065 tcagcctagtagtctcttcggtgac 21100041  T

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Target: chr3; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 758351 - 758446
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||| ||||||||| |||||||| ||| | || ||||||||||||||||| ||||||||||||||| | |||||||||| |||||||||||||    
T  758351 acagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagag 758446  T

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Target: chr3; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 7571201 - 7571296
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||| ||| |||||||| ||| | || |||| ||||||||||| |||||||||||||||||| |||||||||| |||||||||||||    
T  7571201 acagttgtagctgagcttgttttatcctggaggcggcgtgattgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagag 7571296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 8883280 - 8883185
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||| ||||||||| |||||||| ||| | |  |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||    
T  8883280 acagttgcagctgggcttgttttatcctggaggcagcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagag 8883185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 20520164 - 20520069
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||||||| || |||||||||||| | || ||||||||||||||| | ||||||||| ||||||| |||||||||| |||||||||||||    
T  20520164 acagttgtagctggacttgttttatcttggaggcggcgtggttgatagtctcccttgcacaatcttgggcagtgccacgaaacgtcttaaagagag 20520069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 164 - 260
Target Start/End: Original strand, 12971616 - 12971714
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagagaga 260  Q
    |||||||||| |||||| |||||||| | | | || |||| |||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  12971616 acagttgtagttgggcttgttttatcctagaggcggcgtgattgataatctgtcttgcacaattttgggcaatgccacgaaacgtcttaaagagagaga 12971714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 199 - 257
Target Start/End: Complemental strand, 3419069 - 3419010
Alignment:
Q  199 cgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  3419069 cgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagag 3419010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 18467318 - 18467240
Alignment:
Q  180 tgttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||| ||| | || ||||||| ||||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  18467318 tgttttatcctggaggcggcgtggttaatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagag 18467240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 255
Target Start/End: Original strand, 14438678 - 14438771
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagag 255  Q
    ||||||| ||||||||| |||||||| ||| | || |||||||||| |||||| ||||||||||||||| | |||||||||| |||||||||||    
T  14438678 acagttgcagctgggcttgttttatcctggaggcggcgtggttgattgtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagag 14438771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 342
Target Start/End: Original strand, 28243377 - 28243665
Alignment:
Q  35 tcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattggaatgtgtatttctagaa 134  Q
    |||||||| | ||||||| ||||| ||||||| |||| ||||| |||  |||||||||| ||||| |||||| ||||||||  || |||| |||||||||    
T  28243377 tcctagtaccgtataagaatggtcatagtaccctaatggagtgatatcgataccatattagagtgatcttagcaccatatttaaaagtgtgtttctagaa 28243476  T
Q  135 cagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgcttgcacaattttgggcaat 234  Q
     ||||| ||||||| ||||||| ||| |  ||||||||| || | ||||||||      ||     ||||||||||||||||||| ||||||| | || |    
T  28243477 tagatcttatagtgtaataggactctga--cagttgtagttgtgttgttttat------ga-----tggttgatagtctgcttgcgcaattttcgacagt 28243563  T
Q  235 gccacgaaatgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttttaactaattttgactatt 334  Q
    ||||  ||| |||||||| | || ||     |||||| ||||||||  ||| ||| ||| |  || |||  |||| ||||||||||||||||||||| ||    
T  28243564 gccataaaacgtcttaaaaaaagtgat----ctagtcggcgactcaatctaataaactcgtatgtaaca--aaaattatttttaactaattttgactttt 28243657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 164 - 242
Target Start/End: Complemental strand, 18472117 - 18472037
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaa 242  Q
    ||||||||||||||||| |||||||| ||| | || ||||||||||||||||| |||||||||||| |||| |||||||||    
T  18472117 acagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacgaa 18472037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 164 - 242
Target Start/End: Original strand, 23661447 - 23661527
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaa 242  Q
    ||||||| ||||||||| |||||||| ||| | || ||||||||||||||||| ||||||||||||||||| |||||||||    
T  23661447 acagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaa 23661527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 3033754 - 3033659
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||| ||| |||||||| | | | ||  |||||||||||||||| ||||||||||||||||| ||||| |||| |||||||||||||    
T  3033754 acagttgtagctgagcttgttttatccttgaggcggtgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagag 3033659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 3657223 - 3657318
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||||||| || |||||||||||| |  | | |||||||||||||| ||||||||||||||  || |||||||||| |||||||||||||    
T  3657223 acagttgtagctggacttgttttatcttggaggtggcatggttgatagtctgtcttgcacaattttgaacagtgccacgaaacgtcttaaagagag 3657318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 146
Target Start/End: Complemental strand, 4662423 - 4662286
Alignment:
Q  17 aacaccatataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtata----aataccatattggagtggtcttag----aa 108  Q
    |||||||||| ||| || || ||| | ||||||||| ||||||||||| |||||||| ||||||||    ||||||||||  ||||||||||||     |    
T  4662423 aacaccatattagaatggtcttagaaccatataagaatggtcttagtatcataatagtgtggtatatatcaataccatatgagagtggtcttagctaaca 4662324  T
Q  109 ccatattggaatgtgtatttctagaacagatcctatag 146  Q
    ||||||| ||| |||||||  |||||||||||||||||    
T  4662323 ccatatttgaaggtgtattcatagaacagatcctatag 4662286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 8069789 - 8069695
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||| ||||||||| |||||||| ||| | || |||||||||||||||| |||||||||||| || || |||||||||| |||||||||||||    
T  8069789 acagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattt-ggacagtgccacgaaacgtcttaaagagag 8069695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 12965873 - 12965951
Alignment:
Q  180 tgttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||| ||| | || |||||||||||||||| |||||||||||||||||| |||||  ||| |||||||||||||    
T  12965873 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccataaaacgtcttaaagagag 12965951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 55431425 - 55431330
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||||||| || |||||||| ||| | || |||||||||||||||| |||||| |||||| | || || ||||||| |||||||||||||    
T  55431425 acagttgtagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcataatttttgacagtgtcacgaaacgtcttaaagagag 55431330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 200 - 257
Target Start/End: Original strand, 12112661 - 12112719
Alignment:
Q  200 gtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||| ||||||||| ||||| || |||||||||| |||||||||||||    
T  12112661 gtggttgatagtctgtcttgcacaactttggacagtgccacgaaacgtcttaaagagag 12112719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 256
Target Start/End: Original strand, 49971407 - 49971501
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagaga 256  Q
    ||||||| |||||| || |||||||| ||| | || |||| |||||||||||| ||||||||||||||  | |||||||||| ||||||||||||    
T  49971407 acagttgcagctggacttgttttatcctggaggcggcgtgattgatagtctgccttgcacaattttggatagtgccacgaaacgtcttaaagaga 49971501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 254
Target Start/End: Complemental strand, 29350350 - 29350258
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaaga 254  Q
    |||||||||| || ||| |||||||| ||| | || | |||| ||| |||||| ||||||||||||||||| |||||||||| ||||||||||    
T  29350350 acagttgtagttgagcttgttttatcctggaggcggcatggtagatggtctgccttgcacaattttgggcagtgccacgaaacgtcttaaaga 29350258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 27709046 - 27708959
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtctt 249  Q
    ||||||| ||||||||| |||||||| ||| | || ||||||||||||||| | ||||| ||||||||||| ||||| |||| |||||    
T  27709046 acagttgaagctgggcttgttttatcctggaggcggcgtggttgatagtctaccttgcataattttgggcagtgccatgaaacgtctt 27708959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 8888023 - 8887945
Alignment:
Q  180 tgttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||| ||| | || ||||||||||| |||| ||||||||||||||| || ||| || ||| |||||||||||||    
T  8888023 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttggacagtgcaacaaaacgtcttaaagagag 8887945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 28125189 - 28125136
Alignment:
Q  200 gtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaa 252  Q
    |||||| |||||||| |||||||||||||  ||| |||||||||||||||||||    
T  28125189 gtggttaatagtctgtcttgcacaattttaagcagtgccacgaaatgtcttaaa 28125136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 25726815 - 25726871
Alignment:
Q  201 tggttgatagtctgcttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||| ||| |||||||||| |||| | |||| ||||| |||||||||||||    
T  25726815 tggttgatagcctgattgcacaattctgggtagtgccgcgaaacgtcttaaagagag 25726871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 138; Significance: 6e-72; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 85 - 343
Target Start/End: Original strand, 6898262 - 6898514
Alignment:
Q  85 taccatattggagtggtcttagaaccatattggaatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttt 184  Q
    ||||||||  |||||||||||| | |||||||||| |||||||| ||||||||||||||||||||||||||| ||| |||||||||| |||||| |||||    
T  6898262 taccatataagagtggtcttagcatcatattggaaggtgtatttttagaacagatcctatagtgcaataggactctgatacagttgttgctgggttgttt 6898361  T
Q  185 tatcttggggacgtcgtggttgatagtctgcttgcacaattttgggcaatgccacgaaatgtcttaaagagagagagggacctagtctgcgactcagcct 284  Q
     ||| ||||||||| |||||||||||||||||||||||||||||| || |||||| |||  |||||||||||| ||     |||||| ||||||||||||    
T  6898362 -atcctggggacgttgtggttgatagtctgcttgcacaattttggacagtgccacaaaacatcttaaagagagcgat----ctagtccgcgactcagcct 6898456  T
Q  285 agtaatctcttcggtgacagaaaaaatatttttaactaattttgactattgttccaaca 343  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||    
T  6898457 agtaatctcttcggtgacag-aaaaatatttttaactaattttgactcttgttctaaca 6898514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 45 - 343
Target Start/End: Original strand, 29478020 - 29478314
Alignment:
Q  45 atataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattggaatgtgtatttctagaacagatcctat 144  Q
    |||||||| || ||||||||| ||||||||||||||| ||||||||||| |||||||||||| |||||||| ||| |||||||||||||||| ||||| |    
T  29478020 atataagaatgatcttagtactataatagagtggtatcaataccatattagagtggtcttagcaccatatttgaaggtgtatttctagaacatatcctgt 29478119  T
Q  145 agtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgcttgcacaattttgggcaatgccacgaaat 244  Q
     |||||||| || | | |||| |||||||||||||| ||||||| || || |||| |||||||||||||| ||||||||||||||||| ||||||||||     
T  29478120 ggtgcaatatgactatgatactgttgtagctgggctattttatcatgtgggcgtcatggttgatagtctgtttgcacaattttgggcagtgccacgaaac 29478219  T
Q  245 gtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttttaactaa-ttttgactattgttccaaca 343  Q
    ||||| ||||||| ||    | |||||  ||||||||||||||| |||||||| |||||| |||||| ||| ||||||| |||| |||||||||||||||    
T  29478220 gtcttgaagagagcga----cttagtccacgactcagcctagtagtctcttcgatgacag-aaaaatctttataactaattttttactattgttccaaca 29478314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 17 - 211
Target Start/End: Original strand, 25832200 - 25832394
Alignment:
Q  17 aacaccatataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattg 116  Q
    |||||||||| ||| || || ||||| |||||||||||| |||||||| ||||||||||||  || |||| ||||||||||||||||||  ||||||||     
T  25832200 aacaccatattagagtggtcttagtaccatataagagtgatcttagtatcataatagagtgacattaatatcatattggagtggtcttaacaccatattt 25832299  T
Q  117 gaatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagt 211  Q
     || ||||||||||| ||||||| |||||||| |||| || ||| |||||||||||| |||| ||||||||| ||||| ||||||||||||||||    
T  25832300 aaaagtgtatttctataacagattctatagtgtaatatgactctgatacagttgtaggtgggttgttttatcatgggggcgtcgtggttgatagt 25832394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 42 - 345
Target Start/End: Original strand, 23616244 - 23616546
Alignment:
Q  42 atcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattggaatgtgtatttctagaacagatcc 141  Q
    |||||||  |||||||| || ||||||| || |||||| | | ||||||| | |||||||||||| |||||||| ||| ||| ||||||||||  |||||    
T  23616244 atcatatttgagtggtcataataccatattatagtggtctcagtaccataatagagtggtcttagcaccatatttgaaggtgaatttctagaatggatcc 23616343  T
Q  142 tatagtgcaataggattcttatacagttgtagctgggctgttttatcttggggacgtcgtggttgatagtctgcttgcacaattttgggcaa----tgcc 237  Q
    ||||||||| ||||||||| ||||| |||||| || | ||||||||| || ||||||||||||||||||| ||||||||||||||||| |||    | ||    
T  23616344 tatagtgcagtaggattctgatacaattgtagttgagttgttttatcatgaggacgtcgtggttgatagtatgcttgcacaattttggacaatcagtacc 23616443  T
Q  238 acgaaatgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttttaactaattttgactattgtt 337  Q
    |  |||  ||||||    | |||| ||  |||||  |||||| ||||| |||| ||||||||||| ||||| || |||||| |||||||||| |||||||    
T  23616444 aaaaaagatcttaa----aaagagcgatttagtccacgactccgcctaataatatcttcggtgactgaaaatat-tttttacctaattttgattattgtt 23616538  T
Q  338 ccaacaat 345  Q
    ||||||||    
T  23616539 ccaacaat 23616546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 17 - 341
Target Start/End: Original strand, 20130170 - 20130493
Alignment:
Q  17 aacaccatataagactgttcctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttagaaccatattg 116  Q
    |||||| ||| ||| || || ||||||||||  ||||||||||  |||||||| |||||||||| ||||||||||  ||||||||||||| ||||||||     
T  20130170 aacaccgtattagagtgatcatagtatcatacgagagtggtctatgtaccatactagagtggtagaaataccataacggagtggtcttagcaccatattt 20130269  T
Q  117 gaatgtgtatttctagaacagatcctatagtgcaataggattcttatacagttgtagctgggctgttttatcttgg-----ggacgtcgtggttgatagt 211  Q
     || |||||||||  |||| ||||||| ||| || || || ||| |||||||||||| || | ||||||||| | |     || |||| || ||||||||    
T  20130270 aaaagtgtatttcatgaacggatcctacagtacagtaagactctgatacagttgtagttgagttgttttatcataggggtcgggcgtcatgcttgatagt 20130369  T
Q  212 ctgcttgcacaattttgggcaatgccacgaaatgtcttaaagagagagagggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaat 311  Q
     ||||||||||||||||| |||||  ||||||||| ||||| | |||    ||||||||| ||||||||| ||| |||||| || | ||| ||  |||||    
T  20130370 ttgcttgcacaattttggacaatgatacgaaatgttttaaatataga----gacctagtccgcgactcagtctaataatctatttgatgatag--aaaat 20130463  T
Q  312 atttttaactaattttgactattgttccaa 341  Q
    |||||||||||||||| | |||||||||||    
T  20130464 atttttaactaattttaattattgttccaa 20130493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 63 - 327
Target Start/End: Original strand, 1289214 - 1289474
Alignment:
Q  63 taccataatagagtggtataaataccatattggagtggtcttagaaccatattggaatgtgtatttctagaacagatcctatagtgcaataggattctta 162  Q
    ||||||||||||||| ||| ||||||||| || ||||||||||||||||||||  || |||| ||| | |||| ||||||| |||||| || ||     |    
T  1289214 taccataatagagtgctatcaataccataatgaagtggtcttagaaccatatttaaaggtgttttt-tggaacggatcctacagtgcagtaagacatcga 1289312  T
Q  163 tacagttgtagctgg---gctgttttatcttggggacgtcgtggttgatagtctgcttgcacaattttgggcaatgccacgaaatgtcttaaagagagag 259  Q
    |||| |||||||| |   |  |||||||||||  | ||| ||||||||||||||||||||| ||||||| | | || ||| ||| |||||||    ||||    
T  1289313 tacaattgtagctagctggaagttttatcttgaaggcgttgtggttgatagtctgcttgcataattttgagtagtgtcacaaaacgtcttaa----agag 1289408  T
Q  260 agggacctagtctgcgactcagcctagtaatctcttcggtgacagaaaaaatatttttaactaatttt 327  Q
    || |||||| ||||||| ||| ||||||||||||||||||||| |  |||||||||||||||||||||    
T  1289409 agcgacctattctgcgattcaacctagtaatctcttcggtgactg--aaaatatttttaactaatttt 1289474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 26341311 - 26341216
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||||||| || |||||||| ||| | || ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  26341311 acagttgtagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaaagagag 26341216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 4579620 - 4579525
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||||||| || |||||||| ||| | || ||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  4579620 acagttgtagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagag 4579525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 23866180 - 23866085
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||| ||||| ||| |||||||| ||| | || |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||    
T  23866180 acagttgcagctgagcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagag 23866085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 9650967 - 9651045
Alignment:
Q  180 tgttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||| ||| | || |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||    
T  9650967 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagag 9651045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 4930345 - 4930250
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||| |||||| |||||||| ||| | || ||||||||||||| || ||| |||||||||||||| |||||||||| |||||||||||||    
T  4930345 acagttgtagttgggcttgttttatcctggaggcggcgtggttgatagtatgacttacacaattttgggcagtgccacgaaacgtcttaaagagag 4930250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 23246916 - 23247011
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||| || ||| |||||||| ||| | || ||||||||||||||||| ||||||||||||||||| ||||||||||  ||||||||||||    
T  23246916 acagttgtaggtgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacatcttaaagagag 23247011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 257
Target Start/End: Complemental strand, 8076126 - 8076067
Alignment:
Q  199 cgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||||||||| ||||||||||||| |||| |||||||||| |||||||||||||    
T  8076126 cgtggttgatagtctgtcttgcacaattttaggcagtgccacgaaacgtcttaaagagag 8076067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 8268405 - 8268310
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||||||| || |||||||| ||| |  | |||||||||||||||| ||||||||||||||| || |||||| ||| |||||||||||||    
T  8268405 acagttgtagctggacttgttttatcatggaggtggcgtggttgatagtctgtcttgcacaattttggacagtgccacaaaacgtcttaaagagag 8268310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 13314219 - 13314314
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||| ||| |||||||| ||| | || ||||| ||||||||| | ||||||||||||||||| | |||||||| |||||||||||||    
T  13314219 acagttgtagctgagcttgttttatcctggaggcgacgtggctgatagtctaccttgcacaattttgggcagtaccacgaaacgtcttaaagagag 13314314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 44510660 - 44510755
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||| ||||| ||| |||||||| ||| | || |||||||||||||||| ||||||||||||||| || |||||| ||| |||||||||||||    
T  44510660 acagttgcagctgagcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttggacagtgccacaaaacgtcttaaagagag 44510755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 6898239 - 6898283
Alignment:
Q  18 acaccatataagactgttcctagtatcatataagagtggtcttag 62  Q
    |||||||||||||||| |||||||| |||||||||||||||||||    
T  6898239 acaccatataagactggtcctagtaccatataagagtggtcttag 6898283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 42627216 - 42627275
Alignment:
Q  199 cgtggttgatagtctgctt-gcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||||| |||||||||||||   |||||||||| |||||||||||||    
T  42627216 cgtggttgatagtctgctttgcacaattttgggttgtgccacgaaacgtcttaaagagag 42627275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 44423120 - 44423215
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||| ||| || |||||||| ||| | || ||| ||||||||||||| ||| |||||||||| || |||||||||| |||||||||||||    
T  44423120 acagttgtagatggacttgttttatcctggaggcggcgtagttgatagtctgccttgaacaattttggtcagtgccacgaaacgtcttaaagagag 44423215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 257
Target Start/End: Complemental strand, 27238353 - 27238259
Alignment:
Q  165 cagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||| || |||||||||||  | || |||| |||||||||||| || |||||||||| ||| |||||| ||| |||||||||||||    
T  27238353 cagttgtagctggacttgttttatcttgcaggcggcgtgattgatagtctgccttacacaattttgagcagtgccacaaaacgtcttaaagagag 27238259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 30256922 - 30256876
Alignment:
Q  207 atagtctgctt-gcacaattttgggcaatgccacgaaatgtcttaaa 252  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||    
T  30256922 atagtctgctttgcacaattttgggcagtgccacgaaatgtcttaaa 30256876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 4338904 - 4338972
Alignment:
Q  37 ctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttag 106  Q
    |||||||||||| ||| ||||||  ||||||||| |||||||||| ||||||||||| |||| |||||||    
T  4338904 ctagtatcatattagaatggtctctgtaccataa-agagtggtattaataccatattagagttgtcttag 4338972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 257
Target Start/End: Original strand, 3357634 - 3357710
Alignment:
Q  182 ttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||| ||| |||| |||||||||||||||| ||||||||| |||||||  | || ||||| |||||||||||||    
T  3357634 ttttatcatggagacggcgtggttgatagtctgccttgcacaactttgggctgtaccgcgaaacgtcttaaagagag 3357710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 257
Target Start/End: Complemental strand, 29151027 - 29150951
Alignment:
Q  182 ttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||| | || ||||||||||||| ||| ||||||||||||| ||| || ||||||| |||||||| ||||    
T  29151027 ttttatcttggaggcgacgtggttgatagtttgccttgcacaattttgagcagtgtcacgaaacgtcttaaaaagag 29150951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 4334671 - 4334739
Alignment:
Q  37 ctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatattggagtggtcttag 106  Q
    |||||||||||| ||| |||||| |||||||||| |  ||||||| ||||||||||| |||| |||||||    
T  4334671 ctagtatcatattagaatggtctcagtaccataa-atggtggtattaataccatattagagttgtcttag 4334739  T

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Target: scaffold0002 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 4186 - 4091
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||| |||||||| ||| | || ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  4186 acagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaaagagag 4091  T

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Target: scaffold0002; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 164 - 243
Target Start/End: Original strand, 443928 - 444007
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaa 243  Q
    ||||||||||||||||| |||||||| || | ||| |||||||||||||||| ||||||||||||| |||| ||||||||||    
T  443928 acagttgtagctgggcttgttttatcctgag-acggcgtggttgatagtctgccttgcacaatttt-ggcagtgccacgaaa 444007  T

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Target: scaffold0182 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 9870 - 9965
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||||| |||||||| ||| | || ||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  9870 acagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagag 9965  T

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Target: scaffold0352 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 7216 - 7121
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||| ||| |||||||| ||| | || ||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  7216 acagttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagag 7121  T

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Target: scaffold0057 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 35746 - 35651
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||||||| || |||||||| ||| | || ||||||||||||||||| |||||||||||||| || || ||||||| |||||||||||||    
T  35746 acagttgtagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggccagtgtcacgaaacgtcttaaagagag 35651  T

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Target: scaffold0012 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 166069 - 166164
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||| ||||||||| |||||||| ||| | || ||||||||||||| || ||||||||||||| |||| |||||||||| |||||||||||||    
T  166069 acagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtatgtcttgcacaatttttggcagtgccacgaaacgtcttaaagagag 166164  T

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Target: scaffold2020 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold2020
Description:

Target: scaffold2020; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 252
Target Start/End: Complemental strand, 483 - 393
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaa 252  Q
    ||||||||||||| ||| |||||||| ||| | || ||||||||||||| || ||||||||| ||||| |||||||| |||| ||||||||    
T  483 acagttgtagctgagcttgttttatcctggaggcgacgtggttgatagtgtgtcttgcacaactttggacaatgccatgaaacgtcttaaa 393  T

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Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 252
Target Start/End: Original strand, 165012 - 165102
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaa 252  Q
    ||||||||||||| ||| |||||||| ||| | || ||||||||||||| || ||||||||| ||||| |||||||| |||| ||||||||    
T  165012 acagttgtagctgagcttgttttatcctggaggcgacgtggttgatagtgtgtcttgcacaactttggacaatgccatgaaacgtcttaaa 165102  T

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Target: scaffold0054 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 25511 - 25416
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||| |||||| |||||||| |||   || |||||||||||||||| |||||||||||||  ||| || |||| || |||||||||||||    
T  25511 acagttgtagttgggcttgttttatcctggacgcggcgtggttgatagtctgtcttgcacaattttacgcagtgtcacgtaacgtcttaaagagag 25416  T

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Target: scaffold0008 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 255929 - 255834
Alignment:
Q  164 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    |||||||||||||| || |||||||| ||| | || | | ||||||||| || |||||||||||||||| | ||||||||||  ||||||||||||    
T  255929 acagttgtagctggacttgttttatcctggaggcggcatagttgatagtatgtcttgcacaattttgggtagtgccacgaaacctcttaaagagag 255834  T

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Target: scaffold0346 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 11424 - 11369
Alignment:
Q  37 ctagtatcatataagagtggtcttagtaccataatagagtggtataaataccatatt 93  Q
    ||||||| |||| ||| |||||| |||||||||| |||||||||| |||||||||||    
T  11424 ctagtattatattagaatggtctcagtaccataa-agagtggtattaataccatatt 11369  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 1666 - 1583
Alignment:
Q  174 ctgggctgttttatcttggggacgtcgtggttgatagtct-gcttgcacaattttgggcaatgccacgaaatgtcttaaagagag 257  Q
    ||||||||||||||| ||| |||| |||||||| ||||||  |||||||||  ||||| | |||| ||||| |||||||||||||    
T  1666 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgccgcgaaacgtcttaaagagag 1583  T

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