View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3002_low_72 (Length: 339)

Name: NF3002_low_72
Description: NF3002
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3002_low_72
NF3002_low_72
[»] chr1 (78 HSPs)
chr1 (19-173)||(772348-772501)
chr1 (228-339)||(1570222-1570330)
chr1 (296-339)||(16526207-16526250)
chr1 (295-339)||(3269615-3269659)
chr1 (295-339)||(4482628-4482672)
chr1 (295-339)||(6702572-6702616)
chr1 (295-339)||(8865850-8865894)
chr1 (295-339)||(15819631-15819675)
chr1 (296-339)||(1151756-1151799)
chr1 (296-339)||(2556553-2556596)
chr1 (227-282)||(5880843-5880898)
chr1 (296-339)||(6438094-6438137)
chr1 (296-339)||(7166257-7166300)
chr1 (296-339)||(10664824-10664867)
chr1 (300-339)||(19011356-19011395)
chr1 (296-339)||(21265653-21265696)
chr1 (296-339)||(22563383-22563426)
chr1 (296-339)||(25999847-25999890)
chr1 (296-339)||(26584776-26584819)
chr1 (296-339)||(32594248-32594291)
chr1 (296-339)||(33207202-33207245)
chr1 (296-339)||(33254725-33254768)
chr1 (296-339)||(33274897-33274940)
chr1 (296-339)||(35605653-35605696)
chr1 (296-339)||(40519574-40519617)
chr1 (296-339)||(42054330-42054373)
chr1 (296-339)||(42490440-42490483)
chr1 (296-339)||(46965737-46965780)
chr1 (296-339)||(50899540-50899583)
chr1 (301-335)||(19275982-19276016)
chr1 (228-282)||(44921971-44922025)
chr1 (305-339)||(51933512-51933546)
chr1 (298-339)||(16343027-16343068)
chr1 (227-284)||(19285488-19285545)
chr1 (307-339)||(6213429-6213461)
chr1 (299-339)||(9866214-9866254)
chr1 (295-339)||(12502284-12502328)
chr1 (227-297)||(14594660-14594727)
chr1 (299-339)||(15775739-15775779)
chr1 (295-339)||(18551663-18551707)
chr1 (228-290)||(48419967-48420026)
chr1 (296-339)||(1836500-1836543)
chr1 (300-339)||(2277755-2277794)
chr1 (296-339)||(2754357-2754400)
chr1 (296-339)||(5190811-5190854)
chr1 (296-339)||(6130063-6130106)
chr1 (296-339)||(6893267-6893310)
chr1 (292-339)||(8415722-8415769)
chr1 (300-339)||(11215002-11215041)
chr1 (296-339)||(12404353-12404396)
chr1 (296-339)||(13773165-13773208)
chr1 (296-339)||(18467228-18467271)
chr1 (300-339)||(34058215-34058254)
chr1 (296-339)||(37662587-37662630)
chr1 (296-339)||(40375345-40375388)
chr1 (296-339)||(40520827-40520870)
chr1 (299-338)||(42550040-42550079)
chr1 (296-339)||(43884791-43884834)
chr1 (296-339)||(44732630-44732673)
chr1 (296-339)||(47402693-47402736)
chr1 (296-339)||(48638529-48638572)
chr1 (296-339)||(51050187-51050230)
chr1 (228-290)||(773721-773783)
chr1 (305-339)||(27818575-27818609)
chr1 (295-337)||(43677781-43677823)
chr1 (293-339)||(47478878-47478924)
chr1 (228-284)||(52043356-52043409)
chr1 (296-329)||(2876431-2876464)
chr1 (296-337)||(18216903-18216944)
chr1 (296-329)||(18893296-18893329)
chr1 (227-290)||(25298030-25298090)
chr1 (294-339)||(52426943-52426988)
chr1 (307-339)||(24253780-24253812)
chr1 (299-335)||(24874971-24875007)
chr1 (299-339)||(32556959-32556999)
chr1 (228-282)||(33934207-33934258)
chr1 (296-336)||(45333744-45333784)
chr1 (228-284)||(50943928-50943984)
[»] chr5 (55 HSPs)
chr5 (228-284)||(42207807-42207863)
chr5 (296-339)||(6558798-6558841)
chr5 (293-339)||(32505682-32505728)
chr5 (295-339)||(1269197-1269241)
chr5 (295-339)||(6518806-6518850)
chr5 (295-339)||(12463752-12463796)
chr5 (295-339)||(41179833-41179877)
chr5 (296-339)||(1743124-1743167)
chr5 (296-339)||(4417715-4417758)
chr5 (296-339)||(9835030-9835073)
chr5 (296-339)||(11897245-11897288)
chr5 (296-339)||(12891554-12891597)
chr5 (296-339)||(16603395-16603438)
chr5 (296-339)||(17545202-17545245)
chr5 (296-339)||(21918049-21918092)
chr5 (296-339)||(26912830-26912873)
chr5 (296-339)||(27765254-27765297)
chr5 (296-339)||(42320314-42320357)
chr5 (296-338)||(25648116-25648158)
chr5 (298-339)||(4745906-4745947)
chr5 (298-339)||(25472613-25472654)
chr5 (294-339)||(36888425-36888470)
chr5 (295-339)||(5900288-5900332)
chr5 (299-339)||(14641139-14641179)
chr5 (299-335)||(18049655-18049691)
chr5 (299-339)||(35515512-35515552)
chr5 (296-339)||(2328589-2328632)
chr5 (296-339)||(2848210-2848253)
chr5 (296-339)||(5966826-5966869)
chr5 (296-339)||(8241047-8241090)
chr5 (300-339)||(8968750-8968789)
chr5 (296-339)||(9125660-9125703)
chr5 (296-339)||(12767961-12768004)
chr5 (296-339)||(13621976-13622019)
chr5 (296-339)||(17064888-17064931)
chr5 (296-339)||(18815345-18815388)
chr5 (296-339)||(21749407-21749450)
chr5 (296-339)||(29713406-29713449)
chr5 (296-339)||(32706319-32706362)
chr5 (296-339)||(39886242-39886285)
chr5 (296-339)||(39919123-39919166)
chr5 (296-339)||(40091474-40091517)
chr5 (296-339)||(42525397-42525440)
chr5 (305-339)||(16386771-16386805)
chr5 (228-284)||(36226446-36226499)
chr5 (294-339)||(22569274-22569319)
chr5 (228-284)||(7649091-7649147)
chr5 (295-339)||(15241392-15241436)
chr5 (299-339)||(17666006-17666046)
chr5 (228-272)||(23270439-23270483)
chr5 (299-339)||(23292447-23292487)
chr5 (232-290)||(28867616-28867671)
chr5 (228-290)||(42027680-42027739)
chr5 (304-336)||(42317404-42317436)
chr5 (307-339)||(43580886-43580918)
[»] chr7 (54 HSPs)
chr7 (228-293)||(5800726-5800791)
chr7 (295-339)||(12640619-12640663)
chr7 (296-339)||(2228972-2229015)
chr7 (296-339)||(2681093-2681136)
chr7 (296-339)||(9877297-9877340)
chr7 (296-339)||(10244919-10244962)
chr7 (296-339)||(15238886-15238929)
chr7 (296-339)||(19752998-19753041)
chr7 (296-339)||(23102588-23102631)
chr7 (296-339)||(25833552-25833595)
chr7 (296-339)||(29617402-29617445)
chr7 (296-339)||(35950125-35950168)
chr7 (296-339)||(36622171-36622214)
chr7 (296-339)||(37300129-37300172)
chr7 (296-339)||(42443686-42443729)
chr7 (296-339)||(44616599-44616642)
chr7 (296-339)||(47641042-47641085)
chr7 (296-339)||(47999777-47999820)
chr7 (294-339)||(21066881-21066926)
chr7 (296-337)||(23755046-23755087)
chr7 (227-284)||(48109601-48109658)
chr7 (295-339)||(12772111-12772155)
chr7 (299-339)||(24781030-24781070)
chr7 (228-276)||(25489826-25489874)
chr7 (299-339)||(27510287-27510327)
chr7 (291-339)||(30940763-30940811)
chr7 (299-339)||(36391934-36391974)
chr7 (295-339)||(38889523-38889567)
chr7 (299-339)||(41465834-41465874)
chr7 (296-339)||(3766808-3766851)
chr7 (296-339)||(5990175-5990218)
chr7 (308-339)||(9497975-9498006)
chr7 (296-339)||(9929934-9929977)
chr7 (296-339)||(24061359-24061402)
chr7 (296-339)||(27424836-27424879)
chr7 (296-339)||(30806112-30806155)
chr7 (296-339)||(31026216-31026259)
chr7 (300-339)||(36174391-36174430)
chr7 (300-339)||(41084040-41084079)
chr7 (296-339)||(46534778-46534821)
chr7 (305-339)||(15655710-15655744)
chr7 (305-339)||(30388537-30388571)
chr7 (305-339)||(32676972-32677006)
chr7 (305-339)||(32984247-32984281)
chr7 (305-339)||(35612597-35612631)
chr7 (296-338)||(36469736-36469778)
chr7 (305-339)||(36720113-36720147)
chr7 (296-337)||(24692472-24692513)
chr7 (299-339)||(18223747-18223787)
chr7 (228-272)||(21766257-21766301)
chr7 (299-339)||(24062041-24062081)
chr7 (307-339)||(32856947-32856979)
chr7 (295-339)||(33996911-33996955)
chr7 (299-339)||(34267581-34267621)
[»] chr3 (82 HSPs)
chr3 (228-284)||(25012626-25012682)
chr3 (295-339)||(19999863-19999907)
chr3 (295-339)||(28550349-28550393)
chr3 (295-339)||(31327531-31327575)
chr3 (295-339)||(31327748-31327792)
chr3 (295-339)||(40548299-40548343)
chr3 (295-339)||(41936437-41936481)
chr3 (295-339)||(52410271-52410315)
chr3 (295-339)||(52945891-52945935)
chr3 (296-339)||(882386-882429)
chr3 (296-339)||(2522923-2522966)
chr3 (296-339)||(6488121-6488164)
chr3 (296-339)||(7269952-7269995)
chr3 (296-339)||(7920317-7920360)
chr3 (296-339)||(19550503-19550546)
chr3 (296-339)||(22501961-22502004)
chr3 (296-339)||(33706757-33706800)
chr3 (296-339)||(37800641-37800684)
chr3 (296-339)||(39966104-39966147)
chr3 (296-339)||(40192153-40192196)
chr3 (296-339)||(40933861-40933904)
chr3 (296-339)||(44652012-44652055)
chr3 (296-339)||(45701341-45701384)
chr3 (228-297)||(49429699-49429765)
chr3 (296-339)||(50496844-50496887)
chr3 (296-339)||(53163591-53163634)
chr3 (296-339)||(53347320-53347363)
chr3 (296-338)||(30555258-30555300)
chr3 (298-339)||(6919993-6920034)
chr3 (294-339)||(50536862-50536907)
chr3 (294-339)||(52974083-52974128)
chr3 (299-339)||(4139000-4139040)
chr3 (299-339)||(9176616-9176656)
chr3 (299-339)||(26942753-26942793)
chr3 (228-290)||(30102575-30102634)
chr3 (295-339)||(31586943-31586987)
chr3 (299-339)||(47098732-47098772)
chr3 (296-339)||(1743827-1743870)
chr3 (296-339)||(3748632-3748675)
chr3 (296-339)||(10176933-10176976)
chr3 (296-339)||(10482883-10482926)
chr3 (296-339)||(11820001-11820044)
chr3 (296-339)||(15975149-15975192)
chr3 (296-339)||(17218485-17218528)
chr3 (296-339)||(18194335-18194378)
chr3 (296-339)||(19996482-19996525)
chr3 (296-339)||(25938960-25939003)
chr3 (296-339)||(28689702-28689745)
chr3 (296-339)||(30779597-30779640)
chr3 (296-339)||(31528988-31529031)
chr3 (296-339)||(32256584-32256627)
chr3 (296-339)||(34102641-34102684)
chr3 (296-339)||(34898797-34898840)
chr3 (228-297)||(39903937-39904003)
chr3 (296-339)||(46795959-46796002)
chr3 (296-339)||(48739774-48739817)
chr3 (305-339)||(4640510-4640544)
chr3 (305-339)||(5636829-5636863)
chr3 (305-339)||(8125645-8125679)
chr3 (305-339)||(17602706-17602740)
chr3 (230-276)||(19559258-19559304)
chr3 (228-284)||(21824463-21824516)
chr3 (305-339)||(36625201-36625235)
chr3 (228-270)||(41923308-41923350)
chr3 (295-336)||(10349401-10349442)
chr3 (229-284)||(15293752-15293804)
chr3 (294-339)||(33225378-33225423)
chr3 (299-336)||(34757529-34757566)
chr3 (298-339)||(50234123-50234164)
chr3 (294-339)||(52046415-52046460)
chr3 (296-336)||(8964809-8964849)
chr3 (307-339)||(11250621-11250653)
chr3 (232-272)||(31741156-31741196)
chr3 (299-339)||(32828441-32828481)
chr3 (307-339)||(33606969-33607001)
chr3 (299-339)||(39719935-39719975)
chr3 (295-339)||(44685198-44685242)
chr3 (299-339)||(48546173-48546213)
chr3 (299-339)||(52670183-52670223)
chr3 (305-337)||(52984016-52984048)
chr3 (299-339)||(54349870-54349910)
chr3 (295-339)||(54769860-54769904)
[»] chr2 (62 HSPs)
chr2 (296-339)||(15233410-15233453)
chr2 (296-339)||(17034732-17034775)
chr2 (228-282)||(9415086-9415140)
chr2 (294-339)||(38400305-38400350)
chr2 (295-339)||(19684069-19684113)
chr2 (299-339)||(27913499-27913539)
chr2 (296-339)||(1844814-1844857)
chr2 (296-339)||(3446727-3446770)
chr2 (296-339)||(4183173-4183216)
chr2 (296-339)||(8250331-8250374)
chr2 (296-339)||(18694782-18694825)
chr2 (296-339)||(19281605-19281648)
chr2 (296-339)||(22653674-22653717)
chr2 (296-339)||(25857325-25857368)
chr2 (294-337)||(27297170-27297213)
chr2 (296-339)||(33228963-33229006)
chr2 (296-339)||(44948593-44948636)
chr2 (230-284)||(18072353-18072407)
chr2 (294-339)||(1260180-1260225)
chr2 (294-339)||(15764925-15764970)
chr2 (298-339)||(34613978-34614019)
chr2 (295-339)||(5062293-5062337)
chr2 (295-339)||(18278447-18278491)
chr2 (228-276)||(33134087-33134135)
chr2 (228-284)||(36080203-36080259)
chr2 (232-284)||(38702277-38702329)
chr2 (296-339)||(2289607-2289650)
chr2 (296-339)||(2643694-2643737)
chr2 (296-339)||(3438945-3438988)
chr2 (296-339)||(4562782-4562825)
chr2 (296-339)||(5474903-5474946)
chr2 (296-339)||(5521250-5521293)
chr2 (296-339)||(6331559-6331602)
chr2 (296-339)||(7907573-7907616)
chr2 (296-339)||(8763379-8763422)
chr2 (296-339)||(11050787-11050830)
chr2 (296-339)||(15485659-15485702)
chr2 (296-339)||(17078454-17078497)
chr2 (296-339)||(18803208-18803251)
chr2 (288-339)||(28194621-28194672)
chr2 (296-339)||(28195164-28195207)
chr2 (296-339)||(30932476-30932519)
chr2 (296-339)||(33233252-33233295)
chr2 (296-339)||(36005439-36005482)
chr2 (296-339)||(39408720-39408763)
chr2 (296-339)||(40535479-40535522)
chr2 (300-339)||(41509517-41509556)
chr2 (296-339)||(44857264-44857307)
chr2 (305-339)||(6635997-6636031)
chr2 (305-339)||(30392862-30392896)
chr2 (305-339)||(36182648-36182682)
chr2 (297-339)||(41566760-41566802)
chr2 (228-284)||(1397046-1397103)
chr2 (294-339)||(7379630-7379675)
chr2 (294-339)||(20296413-20296458)
chr2 (227-284)||(40497624-40497681)
chr2 (299-339)||(2806531-2806571)
chr2 (295-339)||(3287086-3287130)
chr2 (299-339)||(3301811-3301851)
chr2 (307-339)||(17487712-17487744)
chr2 (299-339)||(19612715-19612755)
chr2 (228-284)||(38692530-38692586)
[»] chr8 (81 HSPs)
chr8 (294-339)||(35939482-35939527)
chr8 (288-339)||(26022235-26022287)
chr8 (295-339)||(44340375-44340419)
chr8 (296-339)||(12255-12298)
chr8 (296-339)||(94541-94584)
chr8 (296-339)||(1937307-1937350)
chr8 (296-339)||(2590146-2590189)
chr8 (296-339)||(8265265-8265308)
chr8 (296-339)||(10736904-10736947)
chr8 (296-339)||(11875883-11875926)
chr8 (296-339)||(11890890-11890933)
chr8 (296-339)||(16449122-16449165)
chr8 (296-339)||(17027910-17027953)
chr8 (296-339)||(17558346-17558389)
chr8 (296-339)||(17698519-17698562)
chr8 (296-339)||(29716857-29716900)
chr8 (296-339)||(30972847-30972890)
chr8 (296-339)||(32719637-32719680)
chr8 (296-339)||(34413059-34413102)
chr8 (296-339)||(34894366-34894409)
chr8 (296-339)||(39362262-39362305)
chr8 (296-339)||(41689879-41689922)
chr8 (296-339)||(43656033-43656076)
chr8 (297-339)||(23178921-23178963)
chr8 (296-338)||(28909462-28909504)
chr8 (227-284)||(12838535-12838592)
chr8 (227-284)||(20285785-20285842)
chr8 (227-284)||(21072414-21072471)
chr8 (294-339)||(23858192-23858237)
chr8 (296-337)||(38745311-38745352)
chr8 (295-339)||(6280476-6280520)
chr8 (228-272)||(8512150-8512194)
chr8 (228-272)||(8517960-8518004)
chr8 (299-339)||(10587307-10587347)
chr8 (228-284)||(14438544-14438600)
chr8 (295-339)||(33617968-33618012)
chr8 (299-339)||(34158687-34158727)
chr8 (295-339)||(42880944-42880988)
chr8 (296-339)||(133412-133455)
chr8 (300-339)||(2787111-2787150)
chr8 (296-339)||(2792776-2792819)
chr8 (296-339)||(5328597-5328640)
chr8 (296-339)||(6659286-6659329)
chr8 (296-339)||(6739688-6739731)
chr8 (296-339)||(7797127-7797170)
chr8 (296-339)||(7816400-7816443)
chr8 (296-339)||(8034442-8034485)
chr8 (296-339)||(14876632-14876675)
chr8 (296-339)||(20540136-20540179)
chr8 (296-339)||(26567278-26567321)
chr8 (296-339)||(29514623-29514666)
chr8 (296-339)||(34266009-34266052)
chr8 (308-339)||(37535529-37535560)
chr8 (296-339)||(37717360-37717403)
chr8 (300-339)||(37838578-37838617)
chr8 (296-339)||(38219598-38219641)
chr8 (296-339)||(43283996-43284039)
chr8 (305-339)||(1286582-1286616)
chr8 (305-339)||(5683760-5683794)
chr8 (305-339)||(8698610-8698644)
chr8 (296-338)||(10568082-10568124)
chr8 (305-339)||(27077127-27077161)
chr8 (228-284)||(34966678-34966731)
chr8 (297-339)||(38402249-38402291)
chr8 (228-284)||(41942522-41942575)
chr8 (305-339)||(42006784-42006818)
chr8 (297-335)||(42877032-42877070)
chr8 (227-284)||(93134-93191)
chr8 (294-339)||(9187253-9187298)
chr8 (294-339)||(28628660-28628705)
chr8 (231-284)||(34180031-34180084)
chr8 (294-339)||(39587542-39587587)
chr8 (299-335)||(8402370-8402406)
chr8 (228-272)||(8514190-8514234)
chr8 (307-339)||(16432158-16432190)
chr8 (228-290)||(24688606-24688665)
chr8 (228-290)||(27020528-27020587)
chr8 (228-260)||(27022841-27022873)
chr8 (299-339)||(34472297-34472337)
chr8 (295-339)||(38620371-38620415)
chr8 (299-339)||(40362048-40362088)
[»] chr6 (51 HSPs)
chr6 (294-339)||(607182-607227)
chr6 (294-339)||(7207839-7207884)
chr6 (299-339)||(32166369-32166409)
chr6 (296-339)||(3794203-3794246)
chr6 (296-339)||(4408355-4408398)
chr6 (296-339)||(7545326-7545369)
chr6 (296-339)||(7865385-7865428)
chr6 (296-339)||(9246412-9246455)
chr6 (296-339)||(9372231-9372274)
chr6 (296-339)||(9435623-9435666)
chr6 (296-339)||(10934596-10934639)
chr6 (296-339)||(15091445-15091488)
chr6 (296-339)||(17441869-17441912)
chr6 (296-339)||(19953858-19953901)
chr6 (296-339)||(30885600-30885643)
chr6 (296-339)||(33573814-33573857)
chr6 (298-339)||(19618758-19618799)
chr6 (295-339)||(4661092-4661136)
chr6 (299-339)||(8439675-8439715)
chr6 (295-339)||(27094837-27094881)
chr6 (296-339)||(216203-216246)
chr6 (296-339)||(1968993-1969036)
chr6 (296-339)||(2816887-2816930)
chr6 (300-339)||(3294765-3294804)
chr6 (232-283)||(4075956-4076007)
chr6 (296-339)||(5052103-5052146)
chr6 (296-339)||(6210051-6210094)
chr6 (296-339)||(8297624-8297667)
chr6 (296-339)||(8857087-8857130)
chr6 (296-339)||(9704414-9704457)
chr6 (296-339)||(13732809-13732852)
chr6 (296-339)||(19892306-19892349)
chr6 (296-339)||(21248529-21248572)
chr6 (296-339)||(28030861-28030904)
chr6 (296-339)||(29284263-29284306)
chr6 (296-339)||(31802050-31802093)
chr6 (228-284)||(28712025-28712078)
chr6 (305-339)||(32611584-32611618)
chr6 (305-338)||(743569-743602)
chr6 (298-335)||(2251837-2251874)
chr6 (299-336)||(3299000-3299037)
chr6 (294-339)||(28148763-28148808)
chr6 (295-339)||(978164-978208)
chr6 (299-339)||(3196619-3196659)
chr6 (299-339)||(4869728-4869768)
chr6 (232-290)||(10460108-10460163)
chr6 (232-284)||(14662375-14662427)
chr6 (305-337)||(15963975-15964007)
chr6 (228-284)||(32333329-32333385)
chr6 (295-339)||(32813680-32813724)
chr6 (299-339)||(34432827-34432867)
[»] chr4 (76 HSPs)
chr4 (227-284)||(7067803-7067860)
chr4 (294-339)||(55251381-55251426)
chr4 (295-339)||(40051618-40051662)
chr4 (296-339)||(3847678-3847721)
chr4 (296-339)||(6371111-6371154)
chr4 (296-339)||(8433653-8433696)
chr4 (296-339)||(8965091-8965134)
chr4 (295-338)||(23705184-23705227)
chr4 (296-339)||(24680116-24680159)
chr4 (296-339)||(26868346-26868389)
chr4 (296-339)||(26919498-26919541)
chr4 (296-339)||(37935858-37935901)
chr4 (296-339)||(39023172-39023215)
chr4 (296-339)||(43147414-43147457)
chr4 (296-339)||(43207666-43207709)
chr4 (296-339)||(43596892-43596935)
chr4 (296-339)||(46105532-46105575)
chr4 (296-339)||(46775060-46775103)
chr4 (296-339)||(48569206-48569249)
chr4 (296-339)||(49901479-49901522)
chr4 (305-339)||(29771329-29771363)
chr4 (296-338)||(35219531-35219573)
chr4 (294-339)||(33530788-33530833)
chr4 (294-339)||(44602480-44602525)
chr4 (296-337)||(45849044-45849085)
chr4 (227-284)||(46620671-46620728)
chr4 (295-339)||(1458048-1458092)
chr4 (295-339)||(3764038-3764082)
chr4 (232-284)||(7438288-7438340)
chr4 (299-339)||(22230464-22230504)
chr4 (299-339)||(22788704-22788744)
chr4 (295-339)||(25235827-25235871)
chr4 (299-339)||(40994133-40994173)
chr4 (299-339)||(43978008-43978048)
chr4 (295-339)||(45112141-45112185)
chr4 (295-339)||(47934102-47934146)
chr4 (296-339)||(3036085-3036128)
chr4 (300-335)||(3784913-3784948)
chr4 (296-339)||(4234315-4234358)
chr4 (296-339)||(4590243-4590286)
chr4 (296-339)||(4958586-4958629)
chr4 (296-339)||(9761112-9761155)
chr4 (296-339)||(11375919-11375962)
chr4 (296-335)||(17872084-17872123)
chr4 (296-339)||(21380212-21380255)
chr4 (296-339)||(21935474-21935517)
chr4 (300-339)||(30217600-30217639)
chr4 (300-339)||(34353780-34353819)
chr4 (296-339)||(35465432-35465475)
chr4 (296-339)||(36132226-36132269)
chr4 (296-339)||(42218747-42218790)
chr4 (296-339)||(45126129-45126172)
chr4 (296-339)||(48798276-48798319)
chr4 (296-339)||(51512039-51512082)
chr4 (296-339)||(52798275-52798318)
chr4 (296-339)||(53376709-53376752)
chr4 (296-339)||(55238529-55238572)
chr4 (296-339)||(55536377-55536420)
chr4 (296-339)||(55853138-55853181)
chr4 (232-282)||(27551102-27551152)
chr4 (228-284)||(35447702-35447755)
chr4 (305-339)||(39696367-39696401)
chr4 (228-284)||(51400161-51400214)
chr4 (306-339)||(25726339-25726372)
chr4 (294-339)||(49757314-49757359)
chr4 (299-339)||(3815060-3815100)
chr4 (295-339)||(10417251-10417295)
chr4 (299-339)||(24997464-24997504)
chr4 (299-339)||(27743738-27743778)
chr4 (228-284)||(28494873-28494929)
chr4 (297-337)||(37251111-37251151)
chr4 (228-276)||(37830912-37830960)
chr4 (299-339)||(39697892-39697932)
chr4 (295-339)||(45673648-45673692)
chr4 (295-339)||(49447117-49447161)
chr4 (299-339)||(50457744-50457784)
[»] scaffold0608 (1 HSPs)
scaffold0608 (295-339)||(8962-9006)
[»] scaffold0445 (1 HSPs)
scaffold0445 (295-339)||(4044-4088)
[»] scaffold0707 (1 HSPs)
scaffold0707 (296-339)||(50-93)
[»] scaffold0128 (1 HSPs)
scaffold0128 (296-339)||(17617-17660)
[»] scaffold0121 (2 HSPs)
scaffold0121 (296-339)||(46523-46566)
scaffold0121 (307-339)||(12002-12034)
[»] scaffold0100 (1 HSPs)
scaffold0100 (296-339)||(45881-45924)
[»] scaffold0088 (1 HSPs)
scaffold0088 (296-339)||(10856-10899)
[»] scaffold0024 (1 HSPs)
scaffold0024 (296-339)||(59780-59823)
[»] scaffold0009 (1 HSPs)
scaffold0009 (296-339)||(266727-266770)
[»] scaffold1185 (1 HSPs)
scaffold1185 (294-339)||(2403-2448)
[»] scaffold0002 (1 HSPs)
scaffold0002 (296-337)||(8857-8898)
[»] scaffold0366 (1 HSPs)
scaffold0366 (299-339)||(890-930)
[»] scaffold0014 (1 HSPs)
scaffold0014 (299-339)||(12291-12331)
[»] scaffold1787 (1 HSPs)
scaffold1787 (296-339)||(397-440)
[»] scaffold0460 (2 HSPs)
scaffold0460 (296-339)||(12456-12499)
scaffold0460 (306-339)||(13233-13266)
[»] scaffold0275 (1 HSPs)
scaffold0275 (296-339)||(8818-8861)
[»] scaffold0028 (1 HSPs)
scaffold0028 (296-339)||(112105-112148)
[»] scaffold0025 (1 HSPs)
scaffold0025 (305-339)||(65817-65851)
[»] scaffold1372 (1 HSPs)
scaffold1372 (306-339)||(1871-1904)
[»] scaffold0288 (1 HSPs)
scaffold0288 (298-339)||(21263-21304)
[»] scaffold0179 (1 HSPs)
scaffold0179 (298-339)||(5981-6022)
[»] scaffold0734 (1 HSPs)
scaffold0734 (163-202)||(3747-3787)
[»] scaffold0690 (1 HSPs)
scaffold0690 (299-339)||(3666-3706)
[»] scaffold0285 (1 HSPs)
scaffold0285 (228-290)||(16659-16718)
[»] scaffold0196 (1 HSPs)
scaffold0196 (232-284)||(9232-9284)
[»] scaffold0063 (1 HSPs)
scaffold0063 (299-339)||(56323-56363)
[»] scaffold0037 (2 HSPs)
scaffold0037 (228-284)||(57068-57124)
scaffold0037 (228-284)||(64193-64249)


Alignment Details
Target: chr1 (Bit Score: 135; Significance: 3e-70; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 772348 - 772501
Alignment:
Q  19 gattgagtttgttagggttttgaaaagagaatacggagaaaaagagaagagtgaagtttgagagtttttcaagtgatgtgaagaaaacaagcgtgaaggg 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  772348 gattgagtttgttagggttttgaaaagagaatacggagaaaaagagaa-agtgaagtttgagagtttttcaagttatgtgaagaaaacatgcgtgaaggg 772446  T
Q  119 ttttgatatatatagtagaaaacatgcacttttggaaacttctagaatctatctt 173  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  772447 ttttgatatatatagtagaaaacatgtacttttggaaacttctagaatctatctt 772501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 228 - 339
Target Start/End: Complemental strand, 1570330 - 1570222
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaagaccgttggtgtcatccccgtcagcttagctcaattggtagggat 327  Q
    ||||||||||||||||  ||||| | | |||   ||||| ||||||||| |||||||  |||| ||  |||||||| ||||||||||| |||||||||||    
T  1570330 ttactttttcattatcctaattatatcctta---aacaattttttctataataaagattgttgttgatatccccgtgagcttagctcagttggtagggat 1570234  T
Q  328 attgcatattat 339  Q
    ||||||||||||    
T  1570233 attgcatattat 1570222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 16526250 - 16526207
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  16526250 atccccgtgagcttagctcaattggtagggatattgcatattat 16526207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 3269615 - 3269659
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  3269615 catccccgtgagcttagctcagttggtagggatattgcatattat 3269659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 4482672 - 4482628
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  4482672 catccccgtgagcttagctcagttggtagggatattgcatattat 4482628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 6702572 - 6702616
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  6702572 catccccgtgagcttagctcagttggtagggatattgcatattat 6702616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 8865850 - 8865894
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  8865850 catccccgtgagcttagctcagttggtagggatattgcatattat 8865894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 15819675 - 15819631
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  15819675 catccccgtgagcttagctcagttggtagggatattgcatattat 15819631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 1151756 - 1151799
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  1151756 atccccgtgagcttagctcagttggtagggatattgcatattat 1151799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 2556553 - 2556596
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  2556553 atccccgtaagcttagctcagttggtagggatattgcatattat 2556596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 5880898 - 5880843
Alignment:
Q  227 tttactttttcattatctcaattacaccattaaataacaactttttctatgataaa 282  Q
    |||||||||||||| || |||||| ||| ||||||||||||||||||||| |||||    
T  5880898 tttactttttcattgtcccaattatacccttaaataacaactttttctataataaa 5880843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 6438137 - 6438094
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  6438137 atccccgtgagcttagctcagttggtagggatattgcatattat 6438094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 7166300 - 7166257
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  7166300 atccccgtgagcttagctcagttggtagggatattgcatattat 7166257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 10664867 - 10664824
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  10664867 atccccgtgagcttagctcagttggtagggatattgcatattat 10664824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 339
Target Start/End: Original strand, 19011356 - 19011395
Alignment:
Q  300 ccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  19011356 ccgtgagcttagctcaattggtagggatattgcatattat 19011395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 21265653 - 21265696
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  21265653 atccccgtgagcttagctcagttggtagggatattgcatattat 21265696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 22563383 - 22563426
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  22563383 atccccgtgagcttagctcagttggtagggatattgcatattat 22563426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 25999847 - 25999890
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  25999847 atccccgtgagcttagctcagttggtagggatattgcatattat 25999890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 26584819 - 26584776
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  26584819 atccccgtgagcttagctcagttggtagggatattgcatattat 26584776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 32594248 - 32594291
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  32594248 atccccgtgagcttagctcagttggtagggatattgcatattat 32594291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 33207202 - 33207245
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  33207202 atccccgtgagcttagctcagttggtagggatattgcatattat 33207245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 33254725 - 33254768
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  33254725 atccccgtgagcttagctcagttggtagggatattgcatattat 33254768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 33274897 - 33274940
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  33274897 atccccgtgagcttagctcagttggtagggatattgcatattat 33274940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 35605696 - 35605653
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  35605696 atccccgtgagcttagctcagttggtagggatattgcatattat 35605653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 40519617 - 40519574
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  40519617 atccccgtgagcttagctcagttggtagggatattgcatattat 40519574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 42054330 - 42054373
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  42054330 atccccgtgagcttagctcagttggtagggatattgcatattat 42054373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 42490483 - 42490440
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  42490483 atccccgtgagcttagctcagttggtagggatattgcatattat 42490440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 46965737 - 46965780
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  46965737 atccccgtgagcttagctcagttggtagggatattgcatattat 46965780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 50899583 - 50899540
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  50899583 atccccgtgagcttagctcagttggtagggatattgcatattat 50899540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 335
Target Start/End: Complemental strand, 19276016 - 19275982
Alignment:
Q  301 cgtcagcttagctcaattggtagggatattgcata 335  Q
    |||||||||||||||||||||||||||||||||||    
T  19276016 cgtcagcttagctcaattggtagggatattgcata 19275982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 44922025 - 44921971
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaa 282  Q
    ||||||||||||||||||||||| ||| ||||| ||||| ||||||||| |||||    
T  44922025 ttactttttcattatctcaattatacccttaaacaacaattttttctataataaa 44921971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 51933512 - 51933546
Alignment:
Q  305 agcttagctcaattggtagggatattgcatattat 339  Q
    |||||||||||||||||||||||||||||||||||    
T  51933512 agcttagctcaattggtagggatattgcatattat 51933546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 339
Target Start/End: Original strand, 16343027 - 16343068
Alignment:
Q  298 ccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||| ||||||||||| |||||||||||||||||||||||    
T  16343027 ccccgtgagcttagctcagttggtagggatattgcatattat 16343068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 284
Target Start/End: Complemental strand, 19285545 - 19285488
Alignment:
Q  227 tttactttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    ||||||||||||||||| |||||| ||| ||||| || |||||||||||| |||||||    
T  19285545 tttactttttcattatcccaattatacccttaaacaaaaactttttctataataaaga 19285488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 339
Target Start/End: Original strand, 6213429 - 6213461
Alignment:
Q  307 cttagctcaattggtagggatattgcatattat 339  Q
    |||||||||||||||||||||||||||||||||    
T  6213429 cttagctcaattggtagggatattgcatattat 6213461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 9866254 - 9866214
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  9866254 cccgtgagcttagctcagttggtagggatattgcatattat 9866214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 12502328 - 12502284
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||| ||||||| |||||||||||||||||||||||    
T  12502328 catccccgtaagcatagctcagttggtagggatattgcatattat 12502284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 297
Target Start/End: Complemental strand, 14594727 - 14594660
Alignment:
Q  227 tttactttttcattatctcaattacaccattaaataacaactttttctatgataaagaccgttggtgtcat 297  Q
    |||||||||||||||||||||||| ||  |||||   ||||||||||||| |||||||  |||||||||||    
T  14594727 tttactttttcattatctcaattatacacttaaa---caactttttctataataaagaatgttggtgtcat 14594660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 15775739 - 15775779
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| |||||| ||||||||||||||||||||||||||||    
T  15775739 cccgtgagcttaactcaattggtagggatattgcatattat 15775779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 18551707 - 18551663
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||||| |||||| ||||||||||||||||    
T  18551707 catccccgtgagcttagctcagttggtatggatattgcatattat 18551663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 290
Target Start/End: Original strand, 48419967 - 48420026
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaagaccgttg 290  Q
    |||||||||||||||| |||||| |||||||   ||||||||||||||| ||||||| |||||    
T  48419967 ttactttttcattatcccaattataccatta---aacaactttttctataataaagatcgttg 48420026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 1836500 - 1836543
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||| ||||||||    
T  1836500 atccccgtgagcttagctcagttggtagggatattacatattat 1836543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 339
Target Start/End: Original strand, 2277755 - 2277794
Alignment:
Q  300 ccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  2277755 ccgtgagcttagctcagttggtagggatattgcatattat 2277794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 2754357 - 2754400
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||| | |||||||||||||||||||||||    
T  2754357 atccccgtgagcttagcttagttggtagggatattgcatattat 2754400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 5190854 - 5190811
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||| | ||||||||||||||||||||||||| |||||||||    
T  5190854 atccccatgagcttagctcaattggtagggatatcgcatattat 5190811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 6130106 - 6130063
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||| ||||||| |||||||||||||||||||||||    
T  6130106 atccccgtgagcgtagctcagttggtagggatattgcatattat 6130063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 6893310 - 6893267
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||    
T  6893310 atccccgtgagcttagctcagttggtagggatattgcattttat 6893267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 8415722 - 8415769
Alignment:
Q  292 tgtcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||| ||||||||||| || ||||||||||||||||||||    
T  8415722 tgtcatccacgtgagcttagctcagttcgtagggatattgcatattat 8415769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 339
Target Start/End: Original strand, 11215002 - 11215041
Alignment:
Q  300 ccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  11215002 ccgtgagcttagctcagttggtagggatattgcatattat 11215041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 12404353 - 12404396
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| || |||| |||||||||||||||||||||||||||    
T  12404353 atccccgtgagattagatcaattggtagggatattgcatattat 12404396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 13773165 - 13773208
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| || |||||||| |||||||||||||||||||||||    
T  13773165 atccccgtgagtttagctcagttggtagggatattgcatattat 13773208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 18467271 - 18467228
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||| ||||||| |||||||||||||||||||||||    
T  18467271 atccccgtgagcatagctcagttggtagggatattgcatattat 18467228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 339
Target Start/End: Original strand, 34058215 - 34058254
Alignment:
Q  300 ccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  34058215 ccgtgagcttagctcagttggtagggatattgcatattat 34058254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 37662630 - 37662587
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||| ||| ||||||||||| |||||||||||||||||||||||    
T  37662630 atcctcgtgagcttagctcagttggtagggatattgcatattat 37662587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 40375388 - 40375345
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||| ||||||| |||||||||||||||||||||||    
T  40375388 atccccgtgagcatagctcagttggtagggatattgcatattat 40375345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 40520827 - 40520870
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| || |||||||| |||||||||||||||||||||||    
T  40520827 atccccgtgagtttagctcagttggtagggatattgcatattat 40520870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 299 - 338
Target Start/End: Complemental strand, 42550079 - 42550040
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatatta 338  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  42550079 cccgtgagcttagctcaatcggtagggatattgcatatta 42550040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 43884791 - 43884834
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| || |||||||| |||||||||||||||||||||||    
T  43884791 atccccgtgagtttagctcagttggtagggatattgcatattat 43884834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 44732630 - 44732673
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| |||||| |||| |||||||||||||||||||||||    
T  44732630 atccccgtgagcttaactcagttggtagggatattgcatattat 44732673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 47402736 - 47402693
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| |||||||||||  ||||||||||||||||||||||    
T  47402736 atccccgtgagcttagctcagctggtagggatattgcatattat 47402693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 48638529 - 48638572
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||    
T  48638529 atccccgtgagcttagctcagttggtagggatattgcattttat 48638572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 51050187 - 51050230
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| ||||||||||||||| |||||||    
T  51050187 atccccgtgagcttagctcagttggtagggatattgtatattat 51050230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 290
Target Start/End: Original strand, 773721 - 773783
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaagaccgttg 290  Q
    |||||||||||||||| |||||| ||| ||||| || || ||||||||| |||||||| ||||    
T  773721 ttactttttcattatcccaattatacccttaaacaataattttttctataataaagactgttg 773783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 27818575 - 27818609
Alignment:
Q  305 agcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||||| |||||||||||||||||||||||    
T  27818575 agcttagctcagttggtagggatattgcatattat 27818609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 337
Target Start/End: Original strand, 43677781 - 43677823
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatatt 337  Q
    |||||||||||||||||| |  |||||||||||||||||||||    
T  43677781 catccccgtcagcttagcccggttggtagggatattgcatatt 43677823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 339
Target Start/End: Complemental strand, 47478924 - 47478878
Alignment:
Q  293 gtcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||| ||| |||||| |||| |||||||||||||||||||||||    
T  47478924 gtcatcctcgtgagcttaactcagttggtagggatattgcatattat 47478878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 52043356 - 52043409
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    ||||||||||||||||||||||| ||| |||   ||||||||||||||| |||||||    
T  52043356 ttactttttcattatctcaattataccttta---aacaactttttctataataaaga 52043409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 329
Target Start/End: Original strand, 2876431 - 2876464
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatat 329  Q
    |||||||| |||||||||||||||||||||||||    
T  2876431 atccccgtgagcttagctcaattggtagggatat 2876464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 18216903 - 18216944
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatatt 337  Q
    |||||||| ||||||||||| |||||||||||||| ||||||    
T  18216903 atccccgtgagcttagctcagttggtagggatattacatatt 18216944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 329
Target Start/End: Complemental strand, 18893329 - 18893296
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatat 329  Q
    |||||||||||||||||||| |||||||||||||    
T  18893329 atccccgtcagcttagctcagttggtagggatat 18893296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 290
Target Start/End: Original strand, 25298030 - 25298090
Alignment:
Q  227 tttactttttcattatctcaattacaccattaaataacaactttttctatgataaagaccgttg 290  Q
    |||||||||||||||||||||||| ||| |||   ||||| ||||||||| ||||||| |||||    
T  25298030 tttactttttcattatctcaattataccttta---aacaaatttttctataataaagatcgttg 25298090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 52426988 - 52426943
Alignment:
Q  294 tcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| |||| ||||||||||| ||| |||||||||||||||||||    
T  52426988 tcatctccgtgagcttagctcagttgatagggatattgcatattat 52426943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 339
Target Start/End: Original strand, 24253780 - 24253812
Alignment:
Q  307 cttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| |||||||||||||||||||||||    
T  24253780 cttagctcatttggtagggatattgcatattat 24253812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 335
Target Start/End: Original strand, 24874971 - 24875007
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcata 335  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  24874971 cccgtgagcttagctcagttggtagggatattgcata 24875007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 32556999 - 32556959
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| |||||||||||  ||||||||||||||||||||||    
T  32556999 cccgtgagcttagctcagctggtagggatattgcatattat 32556959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 33934258 - 33934207
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaa 282  Q
    ||||||||||||||||||||||| ||| |||   ||||||||||||||| |||||    
T  33934258 ttactttttcattatctcaattataccctta---aacaactttttctataataaa 33934207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 336
Target Start/End: Complemental strand, 45333784 - 45333744
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatat 336  Q
    |||||||| ||||||||||| |||| |||||||||||||||    
T  45333784 atccccgtgagcttagctcagttggcagggatattgcatat 45333744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 50943984 - 50943928
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    ||||||||| ||||||||||||| ||| ||||| || |||||||| ||| |||||||    
T  50943984 ttacttttttattatctcaattatacccttaaacaaaaactttttttataataaaga 50943928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 42207807 - 42207863
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||    
T  42207807 ttactttttcattatctcaattataccattaaataacaactttttttataataaaga 42207863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 6558798 - 6558841
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  6558798 atccccgtgagcttagctcaattggtagggatattgcatattat 6558841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 293 - 339
Target Start/End: Original strand, 32505682 - 32505728
Alignment:
Q  293 gtcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||    
T  32505682 gtcatccccgtgagcttagctcagttggtagggatattgcatattat 32505728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 1269241 - 1269197
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||    
T  1269241 catccccgtgagcttagctcaattggtagagatattgcatattat 1269197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 6518850 - 6518806
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  6518850 catccccgtgagcttagctcagttggtagggatattgcatattat 6518806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 12463752 - 12463796
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  12463752 catccccgtgagcttagctcagttggtagggatattgcatattat 12463796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 41179877 - 41179833
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  41179877 catccccgtgagcttagctcagttggtagggatattgcatattat 41179833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 1743124 - 1743167
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  1743124 atccccgtgagcttagctcagttggtagggatattgcatattat 1743167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 4417758 - 4417715
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  4417758 atccccgtgagcttagctcagttggtagggatattgcatattat 4417715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 9835030 - 9835073
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  9835030 atccccgtgagcttagctcagttggtagggatattgcatattat 9835073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 11897245 - 11897288
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  11897245 atccccgtgagcttagctcagttggtagggatattgcatattat 11897288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 12891554 - 12891597
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  12891554 atccccgtgagcttagctcagttggtagggatattgcatattat 12891597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 16603395 - 16603438
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  16603395 atccccgtgagcttagctcagttggtagggatattgcatattat 16603438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 17545245 - 17545202
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  17545245 atccccgtgagcttagctcagttggtagggatattgcatattat 17545202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 21918049 - 21918092
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  21918049 atccccgtgagcttagctcagttggtagggatattgcatattat 21918092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 26912830 - 26912873
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| |||||| ||||||||||||||||||||||||||||    
T  26912830 atccccgtgagcttaactcaattggtagggatattgcatattat 26912873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 27765254 - 27765297
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  27765254 atccccgtgagcttagctcagttggtagggatattgcatattat 27765297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 42320314 - 42320357
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  42320314 atccccgtgagcttagctcagttggtagggatattgcatattat 42320357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 338
Target Start/End: Complemental strand, 25648158 - 25648116
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatatta 338  Q
    |||||||| ||||||||||| ||||||||||||||||||||||    
T  25648158 atccccgtgagcttagctcagttggtagggatattgcatatta 25648116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 339
Target Start/End: Complemental strand, 4745947 - 4745906
Alignment:
Q  298 ccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||| ||||||||||| |||||||||||||||||||||||    
T  4745947 ccccgtgagcttagctcagttggtagggatattgcatattat 4745906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 339
Target Start/End: Complemental strand, 25472654 - 25472613
Alignment:
Q  298 ccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||| ||||||||||| |||||||||||||||||||||||    
T  25472654 ccccgtgagcttagctcagttggtagggatattgcatattat 25472613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 36888470 - 36888425
Alignment:
Q  294 tcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||||    
T  36888470 tcatccccgtgagcttagttcagttggtagggatattgcatattat 36888425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 5900288 - 5900332
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||    
T  5900288 catccccgtgagcttaactcagttggtagggatattgcatattat 5900332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 14641179 - 14641139
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| |||||| ||||||||||||||||||||||||||||    
T  14641179 cccgtgagcttaactcaattggtagggatattgcatattat 14641139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 335
Target Start/End: Complemental strand, 18049691 - 18049655
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcata 335  Q
    ||||| |||||||||||||||||||||||||||||||    
T  18049691 cccgtgagcttagctcaattggtagggatattgcata 18049655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 35515512 - 35515552
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  35515512 cccgtgagcttagctcagttggtagggatattgcatattat 35515552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 2328589 - 2328632
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||| | |||||||||||||||||||||||    
T  2328589 atccccgtgagcttagcttagttggtagggatattgcatattat 2328632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 2848210 - 2848253
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| ||||||||||||||| |||||||    
T  2848210 atccccgtgagcttagctcagttggtagggatattgtatattat 2848253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 5966826 - 5966869
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||| ||||||| |||||||||||||||||||||||    
T  5966826 atccccgtgagcgtagctcagttggtagggatattgcatattat 5966869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 8241047 - 8241090
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||| | ||||||||||| |||||||||||||||||||||||    
T  8241047 atccccatgagcttagctcagttggtagggatattgcatattat 8241090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 339
Target Start/End: Original strand, 8968750 - 8968789
Alignment:
Q  300 ccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  8968750 ccgtgagcttagctcagttggtagggatattgcatattat 8968789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 9125660 - 9125703
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| ||||||| |||||||||||||||    
T  9125660 atccccgtgagcttagctcagttggtagcgatattgcatattat 9125703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 12767961 - 12768004
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||| ||| |||||||||||||||||||||||    
T  12767961 atccccgtgagcttagttcagttggtagggatattgcatattat 12768004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 13622019 - 13621976
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| ||||||||||||| |||||||||    
T  13622019 atccccgtgagcttagctcagttggtagggatatcgcatattat 13621976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 17064931 - 17064888
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||    
T  17064931 atcctcgtgagcttaactcaattggtagggatattgcatattat 17064888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 18815345 - 18815388
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||| ||||||||||||||||    
T  18815345 atccccgtgagcttagctcagttggtaaggatattgcatattat 18815388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 21749450 - 21749407
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||| ||||||||||    
T  21749450 atccccgtgagcttagctcagttggtagggatactgcatattat 21749407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 29713449 - 29713406
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||| ||||||    
T  29713449 atccccgtgagcttagctcagttggtagggatattgcctattat 29713406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 32706319 - 32706362
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||| ||||||||    
T  32706319 atccccgtgagcttagctcagttggtagggatattacatattat 32706362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 39886285 - 39886242
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||| ||||||| |||||||||||||||||||||||    
T  39886285 atccccgtgagcatagctcagttggtagggatattgcatattat 39886242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 39919166 - 39919123
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||| | |||||||||||||||||||||||    
T  39919166 atccccgtgagcttagcttagttggtagggatattgcatattat 39919123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 40091474 - 40091517
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| |||||| |||| |||||||||||||||||||||||    
T  40091474 atccccgtgagcttaactcagttggtagggatattgcatattat 40091517  T

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Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 42525397 - 42525440
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| || |||||||| |||||||||||||||||||||||    
T  42525397 atccccgtgagtttagctcagttggtagggatattgcatattat 42525440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 16386805 - 16386771
Alignment:
Q  305 agcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||||| |||||||||||||||||||||||    
T  16386805 agcttagctcagttggtagggatattgcatattat 16386771  T

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Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 36226446 - 36226499
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    ||||||||||||||||||||||| ||| |||   ||||||||||||||| |||||||    
T  36226446 ttactttttcattatctcaattataccctta---aacaactttttctataataaaga 36226499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 22569319 - 22569274
Alignment:
Q  294 tcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||| || ||||||||||| |||||||| ||||||||||||||    
T  22569319 tcatccctgtgagcttagctcagttggtaggcatattgcatattat 22569274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 7649147 - 7649091
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    ||||||||| |||||| |||| | ||| ||||| ||||||||||||||| |||||||    
T  7649147 ttacttttttattatcccaatcatacccttaaacaacaactttttctataataaaga 7649091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 15241392 - 15241436
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||||| ||| |||| ||||||||||||||    
T  15241392 catccccgtgagcttagctcagttgataggaatattgcatattat 15241436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 17666006 - 17666046
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| |||||||| ||||||||||||||    
T  17666006 cccgtgagcttagctcagttggtaggaatattgcatattat 17666046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 272
Target Start/End: Original strand, 23270439 - 23270483
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaacttttt 272  Q
    |||||||||||||||| |||||| ||| ||||| |||||||||||    
T  23270439 ttactttttcattatcccaattatacccttaaacaacaacttttt 23270483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 23292487 - 23292447
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| |||||||||||||||||| ||||    
T  23292487 cccgtgagcttagctcagttggtagggatattgcatgttat 23292447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 290
Target Start/End: Complemental strand, 28867671 - 28867616
Alignment:
Q  232 tttttcattatctcaattacaccattaaataacaactttttctatgataaagaccgttg 290  Q
    ||||||||||||||||||| ||| |||||   ||||||||||||| ||||||| |||||    
T  28867671 tttttcattatctcaattatacccttaaa---caactttttctataataaagatcgttg 28867616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 290
Target Start/End: Complemental strand, 42027739 - 42027680
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaagaccgttg 290  Q
    ||||||||||||||||||||||| ||  |||   ||||| ||||||||| |||||||||||||    
T  42027739 ttactttttcattatctcaattatactctta---aacaattttttctataataaagaccgttg 42027680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 336
Target Start/End: Original strand, 42317404 - 42317436
Alignment:
Q  304 cagcttagctcaattggtagggatattgcatat 336  Q
    |||||||||||| ||||||||||||||||||||    
T  42317404 cagcttagctcagttggtagggatattgcatat 42317436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 339
Target Start/End: Original strand, 43580886 - 43580918
Alignment:
Q  307 cttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| |||||||||||||||||||||||    
T  43580886 cttagctcagttggtagggatattgcatattat 43580918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 228 - 293
Target Start/End: Original strand, 5800726 - 5800791
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaagaccgttggtg 293  Q
    |||||||||||||||| |||||| ||| ||||||||||| ||||||||| ||||||| ||||||||    
T  5800726 ttactttttcattatcccaattatacccttaaataacaattttttctataataaagatcgttggtg 5800791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 12640663 - 12640619
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  12640663 catccccgtgagcttagctcagttggtagggatattgcatattat 12640619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 2228972 - 2229015
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  2228972 atccccgtgagcttagctcagttggtagggatattgcatattat 2229015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 2681093 - 2681136
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  2681093 atccccgtgagcttagctcagttggtagggatattgcatattat 2681136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 9877340 - 9877297
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  9877340 atccccgtgagcttagctcagttggtagggatattgcatattat 9877297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 10244962 - 10244919
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  10244962 atccccgtgagcttagctcagttggtagggatattgcatattat 10244919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 15238886 - 15238929
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  15238886 atccccgtgagcttagctcagttggtagggatattgcatattat 15238929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 19753041 - 19752998
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  19753041 atccccgtgagcttagctcagttggtagggatattgcatattat 19752998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 23102631 - 23102588
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  23102631 atccccgtgagcttagctcagttggtagggatattgcatattat 23102588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 25833552 - 25833595
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  25833552 atccccgtgagcttagctcagttggtagggatattgcatattat 25833595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 29617402 - 29617445
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  29617402 atccccgtgagcttagctcagttggtagggatattgcatattat 29617445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 35950125 - 35950168
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  35950125 atccccgtgagcttagctcagttggtagggatattgcatattat 35950168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 36622171 - 36622214
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| | |||||||||||||||||||||||||||||||||    
T  36622171 atccccgtgaacttagctcaattggtagggatattgcatattat 36622214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 37300172 - 37300129
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  37300172 atccccgtgagcttagctcagttggtagggatattgcatattat 37300129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 42443686 - 42443729
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  42443686 atccccgtgagcttagctcagttggtagggatattgcatattat 42443729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 44616599 - 44616642
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  44616599 atccccgtgagcttagctcagttggtagggatattgcatattat 44616642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 47641042 - 47641085
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  47641042 atccccgtgagcttagctcagttggtagggatattgcatattat 47641085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 47999777 - 47999820
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  47999777 atccccgtgagcttagctcagttggtagggatattgcatattat 47999820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 21066881 - 21066926
Alignment:
Q  294 tcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||||| || |||||||| |||||||||||||||||||||||    
T  21066881 tcatccccgtgagtttagctcagttggtagggatattgcatattat 21066926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 23755087 - 23755046
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatatt 337  Q
    |||||||| ||||||||||||| |||||||||||||||||||    
T  23755087 atccccgtgagcttagctcaatcggtagggatattgcatatt 23755046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 284
Target Start/End: Original strand, 48109601 - 48109658
Alignment:
Q  227 tttactttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    |||| ||||||||||||||||||| | | ||||||||||||||||||| | |||||||    
T  48109601 tttattttttcattatctcaattatatctttaaataacaactttttctgtaataaaga 48109658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 12772111 - 12772155
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||| ||||||||||| |||||||||||||||||||||||    
T  12772111 catcctcgtgagcttagctcagttggtagggatattgcatattat 12772155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 24781030 - 24781070
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  24781030 cccgtgagcttagctcagttggtagggatattgcatattat 24781070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 276
Target Start/End: Original strand, 25489826 - 25489874
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctat 276  Q
    ||||||||||||||||| ||||| ||| ||||| |||||||||||||||    
T  25489826 ttactttttcattatcttaattatacctttaaacaacaactttttctat 25489874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 27510327 - 27510287
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  27510327 cccgtgagcttagctcagttggtagggatattgcatattat 27510287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 339
Target Start/End: Original strand, 30940763 - 30940811
Alignment:
Q  291 gtgtcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||| |||||||| ||||||||||| ||||||| |||||||||||||||    
T  30940763 gtgttatccccgtgagcttagctcagttggtagtgatattgcatattat 30940811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 36391974 - 36391934
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  36391974 cccgtgagcttagctcagttggtagggatattgcatattat 36391934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 38889567 - 38889523
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||    
T  38889567 catccccgtgagcttaactcagttggtagggatattgcatattat 38889523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 41465834 - 41465874
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  41465834 cccgtaagcttagctcagttggtagggatattgcatattat 41465874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 3766808 - 3766851
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| |||||| |||| |||||||||||||||||||||||    
T  3766808 atccccgtgagcttaactcagttggtagggatattgcatattat 3766851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 5990218 - 5990175
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| ||||||||||||||| |||||||    
T  5990218 atccccgtgagcttagctcagttggtagggatattgtatattat 5990175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 339
Target Start/End: Original strand, 9497975 - 9498006
Alignment:
Q  308 ttagctcaattggtagggatattgcatattat 339  Q
    ||||||||||||||||||||||||||||||||    
T  9497975 ttagctcaattggtagggatattgcatattat 9498006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 9929977 - 9929934
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| ||||||||||||||| |||||||    
T  9929977 atccccgttagcttagctcagttggtagggatattgaatattat 9929934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 24061402 - 24061359
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||| ||||||||||||||    
T  24061402 atccccgtgagcttagctcagttggtaggaatattgcatattat 24061359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 27424836 - 27424879
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||| ||||||||||||||||||    
T  27424836 atccccgtgagcttagctcagttggaagggatattgcatattat 27424879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 30806112 - 30806155
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| || |||||||| |||||||||||||||||||||||    
T  30806112 atccccgtgagtttagctcagttggtagggatattgcatattat 30806155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 31026216 - 31026259
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||| ||||||| |||||||||||||||||||||||    
T  31026216 atccccgtgagcgtagctcagttggtagggatattgcatattat 31026259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 339
Target Start/End: Original strand, 36174391 - 36174430
Alignment:
Q  300 ccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  36174391 ccgtgagcttagctcagttggtagggatattgcatattat 36174430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 339
Target Start/End: Original strand, 41084040 - 41084079
Alignment:
Q  300 ccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  41084040 ccgtgagcttagctcagttggtagggatattgcatattat 41084079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 46534821 - 46534778
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||| | ||||||||||| |||||||||||||||||||||||    
T  46534821 atccccatgagcttagctcagttggtagggatattgcatattat 46534778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 15655710 - 15655744
Alignment:
Q  305 agcttagctcaattggtagggatattgcatattat 339  Q
    |||||||||||||||||||||||||||||| ||||    
T  15655710 agcttagctcaattggtagggatattgcattttat 15655744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 30388571 - 30388537
Alignment:
Q  305 agcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||||| |||||||||||||||||||||||    
T  30388571 agcttagctcagttggtagggatattgcatattat 30388537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 32677006 - 32676972
Alignment:
Q  305 agcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||||| |||||||||||||||||||||||    
T  32677006 agcttagctcagttggtagggatattgcatattat 32676972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 32984281 - 32984247
Alignment:
Q  305 agcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||||| |||||||||||||||||||||||    
T  32984281 agcttagctcagttggtagggatattgcatattat 32984247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 35612631 - 35612597
Alignment:
Q  305 agcttagctcaattggtagggatattgcatattat 339  Q
    |||||||||||||||||||||| ||||||||||||    
T  35612631 agcttagctcaattggtagggagattgcatattat 35612597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 338
Target Start/End: Complemental strand, 36469778 - 36469736
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatatta 338  Q
    |||||||| ||||||||||| |||||||||||||| |||||||    
T  36469778 atccccgtgagcttagctcagttggtagggatattacatatta 36469736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 36720113 - 36720147
Alignment:
Q  305 agcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||||| |||||||||||||||||||||||    
T  36720113 agcttagctcagttggtagggatattgcatattat 36720147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 24692472 - 24692513
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatatt 337  Q
    |||||||| || |||||||| |||||||||||||||||||||    
T  24692472 atccccgtgaggttagctcagttggtagggatattgcatatt 24692513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 18223787 - 18223747
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| |||||| |||| |||||||||||||||||||||||    
T  18223787 cccgtgagcttaactcagttggtagggatattgcatattat 18223747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 272
Target Start/End: Complemental strand, 21766301 - 21766257
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaacttttt 272  Q
    |||||||||||||||| |||||| ||| ||||| |||||||||||    
T  21766301 ttactttttcattatcccaattatacccttaaacaacaacttttt 21766257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 24062081 - 24062041
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| || ||||||||||||||||||||    
T  24062081 cccgtgagcttagctcagttagtagggatattgcatattat 24062041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 339
Target Start/End: Complemental strand, 32856979 - 32856947
Alignment:
Q  307 cttagctcaattggtagggatattgcatattat 339  Q
    ||||||| |||||||||||||||||||||||||    
T  32856979 cttagcttaattggtagggatattgcatattat 32856947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 33996955 - 33996911
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||  ||||||| |||||||||||||||||||||||    
T  33996955 catccccgtgagtatagctcagttggtagggatattgcatattat 33996911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 34267621 - 34267581
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| |||||||| ||||||||||||||    
T  34267621 cccgtgagcttagctcagttggtaggaatattgcatattat 34267581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 25012682 - 25012626
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    ||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||    
T  25012682 ttactttttcattatctcaattatacccttaaacaacaactttttctataataaaga 25012626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 19999863 - 19999907
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  19999863 catccccgtgagcttagctcagttggtagggatattgcatattat 19999907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 28550393 - 28550349
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  28550393 catccccgtgagcttagctcagttggtagggatattgcatattat 28550349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 31327575 - 31327531
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  31327575 catccccgtgagcttagctcagttggtagggatattgcatattat 31327531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 31327792 - 31327748
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  31327792 catccccgtgagcttagctcagttggtagggatattgcatattat 31327748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 40548299 - 40548343
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  40548299 catccccgtgagcttagctcagttggtagggatattgcatattat 40548343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 41936481 - 41936437
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  41936481 catccccgtaagcttagctcagttggtagggatattgcatattat 41936437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 52410315 - 52410271
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  52410315 catccccgtgagcttagctcagttggtagggatattgcatattat 52410271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 52945891 - 52945935
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  52945891 catccccgtgagcttagctcagttggtagggatattgcatattat 52945935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 882386 - 882429
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  882386 atccccgtgagcttagctcagttggtagggatattgcatattat 882429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 2522923 - 2522966
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  2522923 atccccgtgagcttagctcagttggtagggatattgcatattat 2522966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 6488121 - 6488164
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||| | |||||||||||||||||||||||||||||||||||    
T  6488121 atccccatgagcttagctcaattggtagggatattgcatattat 6488164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 7269952 - 7269995
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  7269952 atccccgtgagcttagctcagttggtagggatattgcatattat 7269995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 7920317 - 7920360
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  7920317 atccccgtgagcttagctcagttggtagggatattgcatattat 7920360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 19550503 - 19550546
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  19550503 atccccgtgagcttagctcagttggtagggatattgcatattat 19550546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 22502004 - 22501961
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  22502004 atccccgtgagcttagctcagttggtagggatattgcatattat 22501961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 33706800 - 33706757
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| |||||||||||||||||||||||||| ||||||||    
T  33706800 atccccgtgagcttagctcaattggtagggatattacatattat 33706757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 37800684 - 37800641
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  37800684 atccccgtgagcttagctcagttggtagggatattgcatattat 37800641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 39966147 - 39966104
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  39966147 atccccgtgagcttagctcagttggtagggatattgcatattat 39966104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 40192153 - 40192196
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  40192153 atccccgtgagcttagctcagttggtagggatattgcatattat 40192196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 40933904 - 40933861
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  40933904 atccccgtgagcttagctcagttggtagggatattgcatattat 40933861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 44652055 - 44652012
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  44652055 atccccgtgagcttagctcagttggtagggatattgcatattat 44652012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 45701341 - 45701384
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  45701341 atccccgtgagcttagctcagttggtagggatattgcatattat 45701384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 297
Target Start/End: Complemental strand, 49429765 - 49429699
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaagaccgttggtgtcat 297  Q
    ||||||||||||||||||||||| ||| |||   ||||||||||||||| |||||||  |||||||||||    
T  49429765 ttactttttcattatctcaattataccctta---aacaactttttctataataaagattgttggtgtcat 49429699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 50496887 - 50496844
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  50496887 atccccgtgagcttagctcagttggtagggatattgcatattat 50496844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 53163591 - 53163634
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  53163591 atccccgtgagcttagctcagttggtagggatattgcatattat 53163634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 53347363 - 53347320
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  53347363 atccccgtgagcttagctcagttggtagggatattgcatattat 53347320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 338
Target Start/End: Complemental strand, 30555300 - 30555258
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatatta 338  Q
    |||||||| ||||||||||| ||||||||||||||||||||||    
T  30555300 atccccgtgagcttagctcagttggtagggatattgcatatta 30555258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 339
Target Start/End: Complemental strand, 6920034 - 6919993
Alignment:
Q  298 ccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||| ||||||||||| |||||||||||||||||||||||    
T  6920034 ccccgtgagcttagctcagttggtagggatattgcatattat 6919993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 50536907 - 50536862
Alignment:
Q  294 tcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||    
T  50536907 tcatccccgtgagcttagctcagttggtagagatattgcatattat 50536862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 52974128 - 52974083
Alignment:
Q  294 tcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||    
T  52974128 tcatccccgtgagcttaactcagttggtagggatattgcatattat 52974083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 4139000 - 4139040
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  4139000 cccgtgagcttagctcagttggtagggatattgcatattat 4139040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 9176656 - 9176616
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  9176656 cccgtgagcttagctcagttggtagggatattgcatattat 9176616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 26942753 - 26942793
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  26942753 cccgtaagcttagctcagttggtagggatattgcatattat 26942793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 290
Target Start/End: Complemental strand, 30102634 - 30102575
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaagaccgttg 290  Q
    ||||||||||||||||||||||| ||| |||   ||||||||||||||| ||||||| |||||    
T  30102634 ttactttttcattatctcaattataccctta---aacaactttttctataataaagatcgttg 30102575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 31586943 - 31586987
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||| | ||||||||||| |||||||||||||||||||||||    
T  31586943 catccccatgagcttagctcagttggtagggatattgcatattat 31586987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 47098732 - 47098772
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  47098732 cccgtgagcttagctcagttggtagggatattgcatattat 47098772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 1743870 - 1743827
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| |||||| ||||||||||||||||||||||| ||||    
T  1743870 atccccgtgagcttaactcaattggtagggatattgcattttat 1743827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 3748675 - 3748632
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| ||||||||||||||| |||||||    
T  3748675 atccccgtgagcttagctcagttggtagggatattgtatattat 3748632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 10176976 - 10176933
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| || |||||||| |||||||||||||||||||||||    
T  10176976 atccccgtgaggttagctcagttggtagggatattgcatattat 10176933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 10482926 - 10482883
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| | ||||||||| |||||||||||||||||||||||    
T  10482926 atccccgtgaacttagctcagttggtagggatattgcatattat 10482883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 11820001 - 11820044
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||    
T  11820001 atccccgtgagcttagctcagttggtagggatattgcatgttat 11820044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 15975149 - 15975192
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| || ||||||||||| |||||||||||||||||||||||    
T  15975149 atccctgtgagcttagctcagttggtagggatattgcatattat 15975192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 17218485 - 17218528
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||| | ||||||||||| |||||||||||||||||||||||    
T  17218485 atccccatgagcttagctcagttggtagggatattgcatattat 17218528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 18194335 - 18194378
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| || |||||||| |||||||||||||||||||||||    
T  18194335 atccccgtgagtttagctcagttggtagggatattgcatattat 18194378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 19996525 - 19996482
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||| ||||||| |||||||||||||||||||||||    
T  19996525 atccccgtgagcgtagctcagttggtagggatattgcatattat 19996482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 25939003 - 25938960
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| || |||||||| |||||||||||||||||||||||    
T  25939003 atccccgtgagtttagctcagttggtagggatattgcatattat 25938960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 28689745 - 28689702
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| | ||||||||| |||||||||||||||||||||||    
T  28689745 atccccgtgaacttagctcagttggtagggatattgcatattat 28689702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 30779640 - 30779597
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||| ||| ||||||||||| |||||||||||||||||||||||    
T  30779640 atcctcgtgagcttagctcagttggtagggatattgcatattat 30779597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 31529031 - 31528988
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| ||||||||||||||| |||||||    
T  31529031 atccccgtgagcttagctcagttggtagggatattgaatattat 31528988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 32256627 - 32256584
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||    
T  32256627 atccccgtgagcttagctcagttggtagggatattgcatgttat 32256584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 34102684 - 34102641
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||| ||| |||||||||||||||||||||||    
T  34102684 atccccgtgagcttagttcagttggtagggatattgcatattat 34102641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 34898840 - 34898797
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||| ||| |||||||||||||||||||||||    
T  34898840 atccccgtgagcttagttcagttggtagggatattgcatattat 34898797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 297
Target Start/End: Complemental strand, 39904003 - 39903937
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaagaccgttggtgtcat 297  Q
    ||||||||||||||||||||||| ||| |||   ||||||| ||||||| |||||||  |||||||||||    
T  39904003 ttactttttcattatctcaattataccctta---aacaactctttctataataaagattgttggtgtcat 39903937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 46796002 - 46795959
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||    
T  46796002 atccccgtgagcttagctcagttggtagggatattgcattttat 46795959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 48739817 - 48739774
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||    
T  48739817 atccccgtgagcttagctcagttggtagggatattgcattttat 48739774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 4640544 - 4640510
Alignment:
Q  305 agcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||||| |||||||||||||||||||||||    
T  4640544 agcttagctcagttggtagggatattgcatattat 4640510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 5636863 - 5636829
Alignment:
Q  305 agcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||||| |||||||||||||||||||||||    
T  5636863 agcttagctcagttggtagggatattgcatattat 5636829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 8125645 - 8125679
Alignment:
Q  305 agcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||||| |||||||||||||||||||||||    
T  8125645 agcttagctcagttggtagggatattgcatattat 8125679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 17602740 - 17602706
Alignment:
Q  305 agcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||||| |||||||||||||||||||||||    
T  17602740 agcttagctcagttggtagggatattgcatattat 17602706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 19559258 - 19559304
Alignment:
Q  230 actttttcattatctcaattacaccattaaataacaactttttctat 276  Q
    ||||||||||||||||||||| ||| ||||| ||||| |||||||||    
T  19559258 actttttcattatctcaattatacccttaaacaacaattttttctat 19559304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 21824516 - 21824463
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    ||||||||||||||||||||||| ||| |||   ||||||||||||||| |||||||    
T  21824516 ttactttttcattatctcaattataccctta---aacaactttttctataataaaga 21824463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 36625235 - 36625201
Alignment:
Q  305 agcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||||| |||||||||||||||||||||||    
T  36625235 agcttagctcagttggtagggatattgcatattat 36625201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 41923308 - 41923350
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaacttt 270  Q
    ||||||||||||||||||||||| ||| ||||| |||||||||    
T  41923308 ttactttttcattatctcaattatacccttaaacaacaacttt 41923350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 336
Target Start/End: Original strand, 10349401 - 10349442
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatat 336  Q
    ||||||||| ||||||||||| ||| ||||||||||||||||    
T  10349401 catccccgtgagcttagctcagttgatagggatattgcatat 10349442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 284
Target Start/End: Original strand, 15293752 - 15293804
Alignment:
Q  229 tactttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    |||||||| ||||||||||||||||| |||   ||||||||||| |||||||||||    
T  15293752 tacttttttattatctcaattacaccctta---aacaactttttatatgataaaga 15293804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 33225423 - 33225378
Alignment:
Q  294 tcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||||| ||||||||||| ||||||||||||| |||| ||||    
T  33225423 tcatccccgtgagcttagctcagttggtagggatatcgcattttat 33225378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 336
Target Start/End: Original strand, 34757529 - 34757566
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatat 336  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  34757529 cccgtgagcttagctcagttggtagggatattgcatat 34757566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 339
Target Start/End: Original strand, 50234123 - 50234164
Alignment:
Q  298 ccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||| |||||| |||| |||||||||||||||||||||||    
T  50234123 ccccgtgagcttacctcagttggtagggatattgcatattat 50234164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 52046460 - 52046415
Alignment:
Q  294 tcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||| ||||| ||||||||||| |||||||||||||||||| ||||    
T  52046460 tcattcccgtgagcttagctcagttggtagggatattgcattttat 52046415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 336
Target Start/End: Complemental strand, 8964849 - 8964809
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatat 336  Q
    |||||||| || |||||||| ||||||||||||||||||||    
T  8964849 atccccgtgagtttagctcagttggtagggatattgcatat 8964809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 339
Target Start/End: Complemental strand, 11250653 - 11250621
Alignment:
Q  307 cttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| |||||||||||||||||||||||    
T  11250653 cttagctcagttggtagggatattgcatattat 11250621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 272
Target Start/End: Original strand, 31741156 - 31741196
Alignment:
Q  232 tttttcattatctcaattacaccattaaataacaacttttt 272  Q
    ||||||||||||||||||| ||| ||||| |||||||||||    
T  31741156 tttttcattatctcaattatacccttaaacaacaacttttt 31741196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 32828441 - 32828481
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||  |||||||||||||||||||||||    
T  32828441 cccgtgagcttagctcggttggtagggatattgcatattat 32828481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 339
Target Start/End: Complemental strand, 33607001 - 33606969
Alignment:
Q  307 cttagctcaattggtagggatattgcatattat 339  Q
    |||||||||||||||||||||||||||| ||||    
T  33607001 cttagctcaattggtagggatattgcattttat 33606969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 39719935 - 39719975
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| || |||||||| |||||||||||||||||||||||    
T  39719935 cccgtgagtttagctcagttggtagggatattgcatattat 39719975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 44685242 - 44685198
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||| | ||||||| |||||||||||||||    
T  44685242 catccccgtgagcttagcttagttggtagagatattgcatattat 44685198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 48546173 - 48546213
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| ||||||| |||||||||||||||    
T  48546173 cccgtgagcttagctcagttggtagtgatattgcatattat 48546213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 52670223 - 52670183
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||| ||| |||||||||||||||||||||||    
T  52670223 cccgtgagcttagttcagttggtagggatattgcatattat 52670183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 337
Target Start/End: Original strand, 52984016 - 52984048
Alignment:
Q  305 agcttagctcaattggtagggatattgcatatt 337  Q
    ||||||||||| |||||||||||||||||||||    
T  52984016 agcttagctcagttggtagggatattgcatatt 52984048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 54349910 - 54349870
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| |||| |||| |||||||||||||||||||||||||    
T  54349910 cccgtaagctcagcttaattggtagggatattgcatattat 54349870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 54769904 - 54769860
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||| |||| ||||||||| | |||||||||||||||||||||||    
T  54769904 catctccgtgagcttagcttagttggtagggatattgcatattat 54769860  T

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Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 15233410 - 15233453
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  15233410 atccccgtgagcttagctcaattggtagggatattgcatattat 15233453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 17034732 - 17034775
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  17034732 atccccgtgagcttagctcaattggtagggatattgcatattat 17034775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 9415140 - 9415086
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaa 282  Q
    ||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||    
T  9415140 ttactttttcattatctcaattatacccttaaacaacaactttttctataataaa 9415086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 38400305 - 38400350
Alignment:
Q  294 tcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||    
T  38400305 tcatccccgtgagcttagctcagttggtagggatattgcatattat 38400350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 19684069 - 19684113
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  19684069 catccccgtgagcttagctcagttggtagggatattgcatattat 19684113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 27913539 - 27913499
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  27913539 cccgtgagcttagctcaattggtagggatattgcatattat 27913499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 1844814 - 1844857
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  1844814 atccccgtaagcttagctcagttggtagggatattgcatattat 1844857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 3446727 - 3446770
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  3446727 atccccgtgagcttagctcagttggtagggatattgcatattat 3446770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 4183173 - 4183216
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  4183173 atccccgtgagcttagctcagttggtagggatattgcatattat 4183216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 8250374 - 8250331
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  8250374 atccccgtgagcttagctcagttggtagggatattgcatattat 8250331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 18694782 - 18694825
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  18694782 atccccgtgagcttagctcagttggtagggatattgcatattat 18694825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 19281605 - 19281648
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  19281605 atccccgtgagcttagctcagttggtagggatattgcatattat 19281648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 22653717 - 22653674
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  22653717 atccccgtgagcttagctcagttggtagggatattgcatattat 22653674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 25857368 - 25857325
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  25857368 atccccgtgagcttagctcagttggtagggatattgcatattat 25857325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 337
Target Start/End: Original strand, 27297170 - 27297213
Alignment:
Q  294 tcatccccgtcagcttagctcaattggtagggatattgcatatt 337  Q
    |||||||||| ||||||||||| |||||||||||||||||||||    
T  27297170 tcatccccgtgagcttagctcagttggtagggatattgcatatt 27297213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 33229006 - 33228963
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  33229006 atccccgtgagcttagctcagttggtagggatattgcatattat 33228963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 44948593 - 44948636
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  44948593 atccccgtgagcttagctcagttggtagggatattgcatattat 44948636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 284
Target Start/End: Original strand, 18072353 - 18072407
Alignment:
Q  230 actttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    ||||||||||||||||||||| ||| ||||  ||||||||||||||| |||||||    
T  18072353 actttttcattatctcaattatacccttaagcaacaactttttctataataaaga 18072407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 1260180 - 1260225
Alignment:
Q  294 tcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||||| ||||||||||| |||||||||||||||||| ||||    
T  1260180 tcatccccgtgagcttagctcagttggtagggatattgcatgttat 1260225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 15764925 - 15764970
Alignment:
Q  294 tcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||| ||| ||||||||||| |||||||||||||||||||||||    
T  15764925 tcatcctcgtgagcttagctcagttggtagggatattgcatattat 15764970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 339
Target Start/End: Original strand, 34613978 - 34614019
Alignment:
Q  298 ccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||| ||||||||||| |||||||||||||||||||||||    
T  34613978 ccccgtgagcttagctcagttggtagggatattgcatattat 34614019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 5062293 - 5062337
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||    
T  5062293 catccccgtgagcttaactcagttggtagggatattgcatattat 5062337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 18278491 - 18278447
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| || |||||||| |||||||||||||||||||||||    
T  18278491 catccccgtgagtttagctcagttggtagggatattgcatattat 18278447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 33134135 - 33134087
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctat 276  Q
    ||||||||||||||||||||||| ||| ||||| ||||| |||||||||    
T  33134135 ttactttttcattatctcaattatacccttaaacaacaaatttttctat 33134087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 36080203 - 36080259
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    |||||||||||||||| |||||| ||| ||||| ||||| ||||||||| |||||||    
T  36080203 ttactttttcattatcccaattatacccttaaacaacaattttttctataataaaga 36080259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 38702329 - 38702277
Alignment:
Q  232 tttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    |||||| |||||||||||| ||| ||||| ||||||||||||||| |||||||    
T  38702329 tttttctttatctcaattatacctttaaacaacaactttttctataataaaga 38702277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 2289607 - 2289650
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||| ||||||||||||||    
T  2289607 atccccgtgagcttagctcagttggtaggaatattgcatattat 2289650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 2643694 - 2643737
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||| ||||||| |||||||||||||||||||||||    
T  2643694 atccccgtgagcatagctcagttggtagggatattgcatattat 2643737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 3438945 - 3438988
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||| ||||||| |||||||||||||||||||||||    
T  3438945 atccccgtgagcgtagctcagttggtagggatattgcatattat 3438988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 4562825 - 4562782
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| || |||||||| |||||||||||||||||||||||    
T  4562825 atccccgtgagtttagctcagttggtagggatattgcatattat 4562782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 5474903 - 5474946
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||| ||||||||||||||||||    
T  5474903 atccccgtgagcttagctcagttggcagggatattgcatattat 5474946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 5521293 - 5521250
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||    
T  5521293 atccccgtgagcttagctcagttgatagggatattgcatattat 5521250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 6331559 - 6331602
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||| ||||||| |||||||||||||||||||||||    
T  6331559 atccccgtgagcatagctcagttggtagggatattgcatattat 6331602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 7907616 - 7907573
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||| | |||||||||||||||||||||||||    
T  7907616 atccccgtgagcttagtttaattggtagggatattgcatattat 7907573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 8763379 - 8763422
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| |||||||||||||| ||||||||||||||| ||||    
T  8763379 atccccgtgagcttagctcaattcgtagggatattgcattttat 8763422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 11050830 - 11050787
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||| ||||||||    
T  11050830 atccccgtgagcttagctcagttggtagggatattacatattat 11050787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 15485659 - 15485702
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||| ||||||||||||||||    
T  15485659 atccccgtgagcttagctcagttggtaaggatattgcatattat 15485702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 17078454 - 17078497
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| ||||||||||||||| |||||||    
T  17078454 atccccgtgagcttagctcagttggtagggatattgtatattat 17078497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 18803208 - 18803251
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||| ||||||||||||||    
T  18803208 atccccgtgagcttagctcacttggtaggaatattgcatattat 18803251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 339
Target Start/End: Original strand, 28194621 - 28194672
Alignment:
Q  288 ttggtgtcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| |||||||| | ||||||||||| ||| |||||||||||||||||||    
T  28194621 ttggtttcatccccatgagcttagctcagttgctagggatattgcatattat 28194672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 28195207 - 28195164
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||| ||| ||||||||||| |||||||||||||||||||||||    
T  28195207 atcctcgtgagcttagctcagttggtagggatattgcatattat 28195164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 30932519 - 30932476
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| |||||| |||| |||||||||||||||||||||||    
T  30932519 atccccgtgagcttacctcagttggtagggatattgcatattat 30932476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 33233295 - 33233252
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| |||||| |||| |||||||||||||||||||||||    
T  33233295 atccccgtgagcttatctcagttggtagggatattgcatattat 33233252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 36005439 - 36005482
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||| || ||||||||||||||||||||||||||||    
T  36005439 atccccgtgagcgtaactcaattggtagggatattgcatattat 36005482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 39408763 - 39408720
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| |||||| |||| |||||||||||||||||||||||    
T  39408763 atccccgtgagcttaactcagttggtagggatattgcatattat 39408720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 40535522 - 40535479
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||| ||||||||||||||||    
T  40535522 atccccgtgagcttagctcagttggtacggatattgcatattat 40535479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 339
Target Start/End: Original strand, 41509517 - 41509556
Alignment:
Q  300 ccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  41509517 ccgtgagcttagctcagttggtagggatattgcatattat 41509556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 44857307 - 44857264
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||| ||| ||||||||||| |||||||||||||||||||||||    
T  44857307 atcctcgtgagcttagctcagttggtagggatattgcatattat 44857264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 6636031 - 6635997
Alignment:
Q  305 agcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||||| |||||||||||||||||||||||    
T  6636031 agcttagctcagttggtagggatattgcatattat 6635997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 30392896 - 30392862
Alignment:
Q  305 agcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||||| |||||||||||||||||||||||    
T  30392896 agcttagctcagttggtagggatattgcatattat 30392862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 36182648 - 36182682
Alignment:
Q  305 agcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||||| |||||||||||||||||||||||    
T  36182648 agcttagctcagttggtagggatattgcatattat 36182682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 339
Target Start/End: Original strand, 41566760 - 41566802
Alignment:
Q  297 tccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||    
T  41566760 tccccgtgagcttagctcagttggtaggaatattgcatattat 41566802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 1397046 - 1397103
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaa-ctttttctatgataaaga 284  Q
    |||||||||||||||| |||||| | ||||||| |||||  |||||||||||||||||    
T  1397046 ttactttttcattatcccaattatatcattaaaaaacaatttttttctatgataaaga 1397103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 7379675 - 7379630
Alignment:
Q  294 tcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||||| |||||| |||| |||||| ||||||||||||||||    
T  7379675 tcatccccgtgagcttaactcagttggtaaggatattgcatattat 7379630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 20296413 - 20296458
Alignment:
Q  294 tcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||||| ||||||||||| ||| || ||||||||||||||||    
T  20296413 tcatccccgtgagcttagctcagttgataaggatattgcatattat 20296458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 284
Target Start/End: Complemental strand, 40497681 - 40497624
Alignment:
Q  227 tttactttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    |||| |||||||||||| |||||| ||| ||||| ||| ||||||||||| |||||||    
T  40497681 tttaatttttcattatcccaattatacccttaaagaaccactttttctataataaaga 40497624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 2806571 - 2806531
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| ||||||||||||||| |||||||    
T  2806571 cccgtgagcttagctcagttggtagggatattgtatattat 2806531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 3287130 - 3287086
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||| || ||||||||||| |||| ||||||||||||||||||    
T  3287130 catccctgtgagcttagctcagttggaagggatattgcatattat 3287086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 3301811 - 3301851
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| |||||||||||||||||| ||||    
T  3301811 cccgtgagcttagctcatttggtagggatattgcattttat 3301851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 339
Target Start/End: Original strand, 17487712 - 17487744
Alignment:
Q  307 cttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| |||||||||||||||||||||||    
T  17487712 cttagctcagttggtagggatattgcatattat 17487744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 19612715 - 19612755
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||| ||| |||||||||||||||||||||||    
T  19612715 cccgtgagcttagttcagttggtagggatattgcatattat 19612755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 38692530 - 38692586
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    |||| ||||||||||  |||||| ||| ||||| ||||||||||||||| |||||||    
T  38692530 ttacattttcattattccaattatacccttaaacaacaactttttctataataaaga 38692586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 81)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 35939482 - 35939527
Alignment:
Q  294 tcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||    
T  35939482 tcatccccgtgagcttagctcagttggtagggatattgcatattat 35939527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 339
Target Start/End: Original strand, 26022235 - 26022287
Alignment:
Q  288 ttggtgtca-tccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||| ||||||||||| |||||||||||||||||||||||    
T  26022235 ttggtgtcaatccccgtgagcttagctcagttggtagggatattgcatattat 26022287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 44340419 - 44340375
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  44340419 catccccgtgagcttagctcagttggtagggatattgcatattat 44340375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 12298 - 12255
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  12298 atccccgtgagcttagctcagttggtagggatattgcatattat 12255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 94584 - 94541
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  94584 atccccgtgagcttagctcagttggtagggatattgcatattat 94541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 1937307 - 1937350
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  1937307 atccccgtgagcttagctcagttggtagggatattgcatattat 1937350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 2590146 - 2590189
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| |||||||||||||| ||||||||||||||||||||    
T  2590146 atccccgtgagcttagctcaattagtagggatattgcatattat 2590189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 8265265 - 8265308
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  8265265 atccccgtgagcttagctcagttggtagggatattgcatattat 8265308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 10736947 - 10736904
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  10736947 atccccgtgagcttagctcagttggtagggatattgcatattat 10736904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 11875883 - 11875926
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  11875883 atccccgtgagcttagctcagttggtagggatattgcatattat 11875926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 11890890 - 11890933
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  11890890 atccccgtgagcttagctcagttggtagggatattgcatattat 11890933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 16449122 - 16449165
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  16449122 atccccgtgagcttagctcagttggtagggatattgcatattat 16449165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 17027953 - 17027910
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  17027953 atccccgtgagcttagctcagttggtagggatattgcatattat 17027910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 17558389 - 17558346
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  17558389 atccccgtgagcttagctcagttggtagggatattgcatattat 17558346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 17698519 - 17698562
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  17698519 atccccgtgagcttagctcagttggtagggatattgcatattat 17698562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 29716857 - 29716900
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  29716857 atccccgtgagcttagctcagttggtagggatattgcatattat 29716900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 30972890 - 30972847
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  30972890 atccccgtgagcttagctcagttggtagggatattgcatattat 30972847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 32719680 - 32719637
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  32719680 atccccgtgagcttagctcagttggtagggatattgcatattat 32719637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 34413059 - 34413102
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  34413059 atccccgtgagcttagctcagttggtagggatattgcatattat 34413102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 34894366 - 34894409
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  34894366 atccccgtaagcttagctcagttggtagggatattgcatattat 34894409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 39362262 - 39362305
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  39362262 atccccgtgagcttagctcagttggtagggatattgcatattat 39362305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 41689879 - 41689922
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  41689879 atccccgtgagcttagctcagttggtagggatattgcatattat 41689922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 43656033 - 43656076
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  43656033 atccccgtgagcttagctcagttggtagggatattgcatattat 43656076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 339
Target Start/End: Complemental strand, 23178963 - 23178921
Alignment:
Q  297 tccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||| ||||||||||| |||||||||||||||||||||||    
T  23178963 tccccgtgagcttagctcagttggtagggatattgcatattat 23178921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 338
Target Start/End: Original strand, 28909462 - 28909504
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatatta 338  Q
    |||||||| ||||||||||| ||||||||||||||||||||||    
T  28909462 atccccgtgagcttagctcagttggtagggatattgcatatta 28909504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 284
Target Start/End: Original strand, 12838535 - 12838592
Alignment:
Q  227 tttactttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    |||||||||||||||||  ||||| ||| ||||| ||||||||||||||| |||||||    
T  12838535 tttactttttcattatcctaattatacccttaaacaacaactttttctataataaaga 12838592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 284
Target Start/End: Complemental strand, 20285842 - 20285785
Alignment:
Q  227 tttactttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    ||||||||||||||||| |||||| ||| ||||| ||||| ||||||||| |||||||    
T  20285842 tttactttttcattatcacaattatacccttaaacaacaattttttctataataaaga 20285785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 284
Target Start/End: Complemental strand, 21072471 - 21072414
Alignment:
Q  227 tttactttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    ||||||||||||||||| |||||| ||| ||||| ||||| ||||||||| |||||||    
T  21072471 tttactttttcattatcacaattatacccttaaacaacaattttttctataataaaga 21072414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 23858192 - 23858237
Alignment:
Q  294 tcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| |||| ||||||||||| |||||||||||||||||||||||    
T  23858192 tcatctccgtgagcttagctcagttggtagggatattgcatattat 23858237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 38745352 - 38745311
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatatt 337  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  38745352 atccccgtgagcttagctcagttggtagggatattgcatatt 38745311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 6280476 - 6280520
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||||| ||||||||||||||| |||||||    
T  6280476 catccccgtgagcttagctcagttggtagggatattgaatattat 6280520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 272
Target Start/End: Complemental strand, 8512194 - 8512150
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaacttttt 272  Q
    ||||||||||||||||||||||| ||| ||||| |||||||||||    
T  8512194 ttactttttcattatctcaattatacctttaaacaacaacttttt 8512150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 272
Target Start/End: Complemental strand, 8518004 - 8517960
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaacttttt 272  Q
    ||||||||||||||||||||||| ||| ||||| |||||||||||    
T  8518004 ttactttttcattatctcaattatacctttaaacaacaacttttt 8517960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 10587347 - 10587307
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  10587347 cccgtaagcttagctcagttggtagggatattgcatattat 10587307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 14438600 - 14438544
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    ||||||||| ||||||||||||| | | ||||| ||||||||||||||| |||||||    
T  14438600 ttacttttttattatctcaattataaccttaaacaacaactttttctataataaaga 14438544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 33617968 - 33618012
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||    
T  33617968 catccccgtgagcttaactcagttggtagggatattgcatattat 33618012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 34158727 - 34158687
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  34158727 cccgtgagcttagctcagttggtagggatattgcatattat 34158687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 42880944 - 42880988
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||    
T  42880944 catccccgtgagcttaactcagttggtagggatattgcatattat 42880988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 133412 - 133455
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||    
T  133412 atccccgtgagcttagctcagttgatagggatattgcatattat 133455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 339
Target Start/End: Complemental strand, 2787150 - 2787111
Alignment:
Q  300 ccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  2787150 ccgtgagcttagctcagttggtagggatattgcatattat 2787111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 2792776 - 2792819
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||    
T  2792776 atccccgtgagcttagctcagttgatagggatattgcatattat 2792819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 5328640 - 5328597
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| || ||||||||||| |||||||||||||||||||||||    
T  5328640 atccctgtaagcttagctcagttggtagggatattgcatattat 5328597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 6659286 - 6659329
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| || |||||||| |||||||||||||||||||||||    
T  6659286 atccccgtgagattagctcagttggtagggatattgcatattat 6659329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 6739688 - 6739731
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| || |||||||| |||||||||||||||||||||||    
T  6739688 atccccgtgagattagctcagttggtagggatattgcatattat 6739731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 7797127 - 7797170
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| ||||||||||||||| |||||||    
T  7797127 atccccgtaagcttagctcagttggtagggatattgaatattat 7797170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 7816400 - 7816443
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| ||||||||||||||| |||||||    
T  7816400 atccccgtaagcttagctcagttggtagggatattgaatattat 7816443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 8034485 - 8034442
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| |||||| |||| |||||||||||||||||||||||    
T  8034485 atccccgtgagcttaactcagttggtagggatattgcatattat 8034442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 14876675 - 14876632
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||| ||||||||||||    
T  14876675 atccccgtgagcttagctcagttggtagggaaattgcatattat 14876632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 20540179 - 20540136
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||    
T  20540179 atccccgtgagcttagctcagttgttagggatattgcatattat 20540136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 26567321 - 26567278
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||    
T  26567321 atccccgtgagcttagctcagttgatagggatattgcatattat 26567278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 29514623 - 29514666
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| ||||||||||||||| |||||||    
T  29514623 atccccgtgagcttagctcagttggtagggatattgtatattat 29514666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 34266009 - 34266052
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||  ||||||||||| |||||||||||||||||||||||    
T  34266009 atccccgcgagcttagctcagttggtagggatattgcatattat 34266052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 339
Target Start/End: Complemental strand, 37535560 - 37535529
Alignment:
Q  308 ttagctcaattggtagggatattgcatattat 339  Q
    ||||||||||||||||||||||||||||||||    
T  37535560 ttagctcaattggtagggatattgcatattat 37535529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 37717360 - 37717403
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| |||||| |||| |||||||||||||||||||||||    
T  37717360 atccccgtgagcttaactcagttggtagggatattgcatattat 37717403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 339
Target Start/End: Original strand, 37838578 - 37838617
Alignment:
Q  300 ccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  37838578 ccgtaagcttagctcaaatggtagggatattgcatattat 37838617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 38219641 - 38219598
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||| ||||||| |||||||||||||||||||||||    
T  38219641 atccccgtgagcatagctcagttggtagggatattgcatattat 38219598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 43284039 - 43283996
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| || |||||||| |||||||||||||||||||||||    
T  43284039 atccccgtgagtttagctcagttggtagggatattgcatattat 43283996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 1286616 - 1286582
Alignment:
Q  305 agcttagctcaattggtagggatattgcatattat 339  Q
    |||||| ||||||||||||||||||||||||||||    
T  1286616 agcttatctcaattggtagggatattgcatattat 1286582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 5683760 - 5683794
Alignment:
Q  305 agcttagctcaattggtagggatattgcatattat 339  Q
    |||||||||||||||||||| ||||||||||||||    
T  5683760 agcttagctcaattggtaggaatattgcatattat 5683794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 8698644 - 8698610
Alignment:
Q  305 agcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||||| |||||||||||||||||||||||    
T  8698644 agcttagctcagttggtagggatattgcatattat 8698610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 338
Target Start/End: Original strand, 10568082 - 10568124
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatatta 338  Q
    |||||||| || |||||||| ||||||||||||||||||||||    
T  10568082 atccccgtgagtttagctcagttggtagggatattgcatatta 10568124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 27077161 - 27077127
Alignment:
Q  305 agcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||||| |||||||||||||||||||||||    
T  27077161 agcttagctcagttggtagggatattgcatattat 27077127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 34966678 - 34966731
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    ||||||||||||||||||||||| ||| |||   ||||||||||||||| |||||||    
T  34966678 ttactttttcattatctcaattataccctta---aacaactttttctataataaaga 34966731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 339
Target Start/End: Original strand, 38402249 - 38402291
Alignment:
Q  297 tccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||| |||||| |||| |||||||||||||||||||||||    
T  38402249 tccccgtgagcttaactcagttggtagggatattgcatattat 38402291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 41942575 - 41942522
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    ||||||||||||||||||||||| ||| |||   ||||||||||||||| |||||||    
T  41942575 ttactttttcattatctcaattataccctta---aacaactttttctataataaaga 41942522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 42006784 - 42006818
Alignment:
Q  305 agcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||||| |||||||||||||||||||||||    
T  42006784 agcttagctcagttggtagggatattgcatattat 42006818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 335
Target Start/End: Original strand, 42877032 - 42877070
Alignment:
Q  297 tccccgtcagcttagctcaattggtagggatattgcata 335  Q
    ||||||| |||||||||||||||||||||| ||||||||    
T  42877032 tccccgtgagcttagctcaattggtagggacattgcata 42877070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 284
Target Start/End: Complemental strand, 93191 - 93134
Alignment:
Q  227 tttactttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    ||||| ||||||||||| |||||| ||| ||||| || |||||||||||| |||||||    
T  93191 tttacattttcattatcccaattatacccttaaacaataactttttctataataaaga 93134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 9187298 - 9187253
Alignment:
Q  294 tcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||||| ||||||||||| |||||||||||||| ||| ||||    
T  9187298 tcatccccgtgagcttagctcagttggtagggatattacattttat 9187253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 28628660 - 28628705
Alignment:
Q  294 tcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||||| ||||||||||| |||||| ||||||| ||||||||    
T  28628660 tcatccccgtgagcttagctcagttggtacggatattacatattat 28628705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 34180031 - 34180084
Alignment:
Q  231 ctttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    ||||||||||||| |||||| | | ||||| ||||||||||||||| |||||||    
T  34180031 ctttttcattatcccaattataaccttaaacaacaactttttctataataaaga 34180084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 39587542 - 39587587
Alignment:
Q  294 tcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||||| ||||||||||| ||||||| |||||||||| ||||    
T  39587542 tcatccccgtgagcttagctcagttggtagagatattgcattttat 39587587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 335
Target Start/End: Complemental strand, 8402406 - 8402370
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcata 335  Q
    ||||| |||||||||||||||||||||| ||||||||    
T  8402406 cccgtgagcttagctcaattggtagggacattgcata 8402370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 272
Target Start/End: Complemental strand, 8514234 - 8514190
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaacttttt 272  Q
    ||||||||| ||||||||||||| ||| ||||| |||||||||||    
T  8514234 ttacttttttattatctcaattatacctttaaacaacaacttttt 8514190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 339
Target Start/End: Complemental strand, 16432190 - 16432158
Alignment:
Q  307 cttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| |||||||||||||||||||||||    
T  16432190 cttagctcagttggtagggatattgcatattat 16432158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 290
Target Start/End: Original strand, 24688606 - 24688665
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaagaccgttg 290  Q
    ||||||||||||||||||||||| ||| |||   ||||| ||||||||| ||||||| |||||    
T  24688606 ttactttttcattatctcaattataccttta---aacaattttttctataataaagatcgttg 24688665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 290
Target Start/End: Complemental strand, 27020587 - 27020528
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaagaccgttg 290  Q
    ||||||||||||||||||||||| ||| |||   ||||||||||||||  ||||||| |||||    
T  27020587 ttactttttcattatctcaattataccctta---aacaactttttctacaataaagatcgttg 27020528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 260
Target Start/End: Complemental strand, 27022873 - 27022841
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaa 260  Q
    ||||||||||||||||||||||| |||||||||    
T  27022873 ttactttttcattatctcaattataccattaaa 27022841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 34472297 - 34472337
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| |||||| |||| |||||||||||||||||||||||    
T  34472297 cccgtgagcttaactcagttggtagggatattgcatattat 34472337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 38620415 - 38620371
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||| || ||||||||||| ||||||||||||||| |||||||    
T  38620415 catccctgtgagcttagctcagttggtagggatattgtatattat 38620371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 40362048 - 40362088
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| || ||||||||||||||||||||    
T  40362048 cccgtgagcttagctcagttagtagggatattgcatattat 40362088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 607182 - 607227
Alignment:
Q  294 tcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||    
T  607182 tcatccccgtgagcttagctcagttggtagggatattgcatattat 607227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 7207839 - 7207884
Alignment:
Q  294 tcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||    
T  7207839 tcatccccgtgagcttagctcagttggtagggatattgcatattat 7207884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 32166369 - 32166409
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  32166369 cccgtgagcttagctcaattggtagggatattgcatattat 32166409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 3794246 - 3794203
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  3794246 atccccgtgagcttagctcagttggtagggatattgcatattat 3794203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 4408355 - 4408398
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  4408355 atccccgtgagcttagctcagttggtagggatattgcatattat 4408398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 7545326 - 7545369
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  7545326 atccccgtgagcttagctcagttggtagggatattgcatattat 7545369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 7865428 - 7865385
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  7865428 atccccgtgagcttagctcagttggtagggatattgcatattat 7865385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 9246455 - 9246412
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  9246455 atccccgtgagcttagctcagttggtagggatattgcatattat 9246412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 9372274 - 9372231
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  9372274 atccccgtgagcttagctcagttggtagggatattgcatattat 9372231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 9435623 - 9435666
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  9435623 atccccgtgagcttagctcagttggtagggatattgcatattat 9435666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 10934596 - 10934639
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  10934596 atccccgtgagcttagctcagttggtagggatattgcatattat 10934639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 15091445 - 15091488
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  15091445 atccccgtgagcttagctcagttggtagggatattgcatattat 15091488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 17441912 - 17441869
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  17441912 atccccgtgagcttagctcagttggtagggatattgcatattat 17441869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 19953901 - 19953858
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  19953901 atccccgtgagcttagctcagttggtagggatattgcatattat 19953858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 30885643 - 30885600
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  30885643 atccccgtgagcttagctcagttggtagggatattgcatattat 30885600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 33573814 - 33573857
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  33573814 atccccgtgagcttagctcagttggtagggatattgcatattat 33573857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 339
Target Start/End: Complemental strand, 19618799 - 19618758
Alignment:
Q  298 ccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||| || ||||||||||||||||||||||||||||||||    
T  19618799 ccccgtgagtttagctcaattggtagggatattgcatattat 19618758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 4661092 - 4661136
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||| | |||||||||||||||||||||||    
T  4661092 catccccgtgagcttagcttagttggtagggatattgcatattat 4661136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 8439675 - 8439715
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  8439675 cccgtgagcttagctcagttggtagggatattgcatattat 8439715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 27094881 - 27094837
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||    
T  27094881 catccccgtgagcttaactcagttggtagggatattgcatattat 27094837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 216203 - 216246
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| || |||||||||||||||||||||||||||||| ||||    
T  216203 atcccagtgagcttagctcaattggtagggatattgcatgttat 216246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 1968993 - 1969036
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||| ||||||||    
T  1968993 atccccgtgagcttagctcagttggtagggatattacatattat 1969036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 2816887 - 2816930
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||| | |||||||||||||||||||||||||||||| ||||    
T  2816887 atccccatgagcttagctcaattggtagggatattgcatgttat 2816930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 339
Target Start/End: Original strand, 3294765 - 3294804
Alignment:
Q  300 ccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  3294765 ccgtgagcttagctcagttggtagggatattgcatattat 3294804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 4076007 - 4075956
Alignment:
Q  232 tttttcattatctcaattacaccattaaataacaactttttctatgataaag 283  Q
    |||||||||||| |||||| ||| ||||| ||||||||||||||| ||||||    
T  4076007 tttttcattatcacaattatacccttaaacaacaactttttctataataaag 4075956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 5052146 - 5052103
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||||||||||||||||| |||| ||||    
T  5052146 atccccgtgagcttagctcaattggtagggatatcgcattttat 5052103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 6210051 - 6210094
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| | ||||||||| |||||||||||||||||||||||    
T  6210051 atccccgtgaacttagctcagttggtagggatattgcatattat 6210094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 8297624 - 8297667
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||||||||||||||| |||||| ||||    
T  8297624 atccccgtgagcttagctcaattggtagggatgttgcatgttat 8297667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 8857087 - 8857130
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||| ||||||||    
T  8857087 atccccgtgagcttagctcagttggtagggatattacatattat 8857130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 9704414 - 9704457
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| | ||||||||| |||||||||||||||||||||||    
T  9704414 atccccgtgaacttagctcagttggtagggatattgcatattat 9704457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 13732809 - 13732852
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| |||||| |||| |||||||||||||||||||||||    
T  13732809 atccccgtgagcttaactcagttggtagggatattgcatattat 13732852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 19892349 - 19892306
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||| ||| |||||||||||||||||||||||    
T  19892349 atccccgtgagcttagttcagttggtagggatattgcatattat 19892306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 21248529 - 21248572
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||    
T  21248529 atccccgtaagcttagctcagttggtagggatattgcattttat 21248572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 28030861 - 28030904
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| || ||||||||||| |||||||||||||||||||||||    
T  28030861 atccctgtgagcttagctcagttggtagggatattgcatattat 28030904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 29284263 - 29284306
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| || |||||||| |||||||||||||||||||||||    
T  29284263 atccccgtgagtttagctcagttggtagggatattgcatattat 29284306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 31802050 - 31802093
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| |||||| |||| |||||||||||||||||||||||    
T  31802050 atccccgtgagcttaactcagttggtagggatattgcatattat 31802093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 28712078 - 28712025
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    ||||||||||||||||||||||| ||| |||   ||||||||||||||| |||||||    
T  28712078 ttactttttcattatctcaattataccctta---aacaactttttctataataaaga 28712025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 32611618 - 32611584
Alignment:
Q  305 agcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||||| |||||||||||||||||||||||    
T  32611618 agcttagctcagttggtagggatattgcatattat 32611584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 338
Target Start/End: Original strand, 743569 - 743602
Alignment:
Q  305 agcttagctcaattggtagggatattgcatatta 338  Q
    ||||||||||| ||||||||||||||||||||||    
T  743569 agcttagctcagttggtagggatattgcatatta 743602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 2251837 - 2251874
Alignment:
Q  298 ccccgtcagcttagctcaattggtagggatattgcata 335  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  2251837 ccccgtgagcttagctcagttggtagggatattgcata 2251874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 336
Target Start/End: Complemental strand, 3299037 - 3299000
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatat 336  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  3299037 cccgtgagcttagatcaattggtagggatattgcatat 3299000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 28148808 - 28148763
Alignment:
Q  294 tcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| | | ||||||||| |||||||||||||||||||||||    
T  28148808 tcatccccttgaacttagctcagttggtagggatattgcatattat 28148763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 978208 - 978164
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| || |||||||| || ||||||||||||||||||||    
T  978208 catccccgtgagtttagctcagttagtagggatattgcatattat 978164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 3196619 - 3196659
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| |||||||||||||| ||||||||    
T  3196619 cccgtgagcttagctcagttggtagggatattacatattat 3196659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 4869768 - 4869728
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| |||||||||||| ||||||||||    
T  4869768 cccgtgagcttagctcagttggtagggatactgcatattat 4869728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 290
Target Start/End: Original strand, 10460108 - 10460163
Alignment:
Q  232 tttttcattatctcaattacaccattaaataacaactttttctatgataaagaccgttg 290  Q
    ||||||||||||||||||| ||| |||   ||||||||||||||| ||||||| |||||    
T  10460108 tttttcattatctcaattataccctta---aacaactttttctataataaagatcgttg 10460163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 14662427 - 14662375
Alignment:
Q  232 tttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    |||||||||||| | |||| ||| ||||| ||||||||||||||| |||||||    
T  14662427 tttttcattatccctattatacccttaaacaacaactttttctataataaaga 14662375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 337
Target Start/End: Complemental strand, 15964007 - 15963975
Alignment:
Q  305 agcttagctcaattggtagggatattgcatatt 337  Q
    ||||||||||| |||||||||||||||||||||    
T  15964007 agcttagctcagttggtagggatattgcatatt 15963975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 32333385 - 32333329
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    ||||||||||||||||  ||||| ||| ||||| |||||||||||| || |||||||    
T  32333385 ttactttttcattatcctaattatacccttaaacaacaactttttccataataaaga 32333329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 32813724 - 32813680
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||| ||| |||||| ||||||||||||||||    
T  32813724 catccccgtgagcttagttcagttggtacggatattgcatattat 32813680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 34432867 - 34432827
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||| ||| |||||||||||||||||||||||    
T  34432867 cccgtgagcttagttcagttggtagggatattgcatattat 34432827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 284
Target Start/End: Complemental strand, 7067860 - 7067803
Alignment:
Q  227 tttactttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    |||| |||||||||||| |||||| ||||||||| ||||||||||||||| |||||||    
T  7067860 tttattttttcattatcccaattataccattaaacaacaactttttctataataaaga 7067803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 55251426 - 55251381
Alignment:
Q  294 tcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||    
T  55251426 tcatccccgtgagcttagctcagttggtagggatattgcatattat 55251381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 40051618 - 40051662
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  40051618 catccccgtgagcttagctcagttggtagggatattgcatattat 40051662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 3847678 - 3847721
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  3847678 atccccgtgagcttagctcagttggtagggatattgcatattat 3847721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 6371111 - 6371154
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  6371111 atccccgtgagcttagctcagttggtagggatattgcatattat 6371154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 8433696 - 8433653
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  8433696 atccccgtgagcttagctcagttggtagggatattgcatattat 8433653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 8965091 - 8965134
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  8965091 atccccgtgagcttagctcagttggtagggatattgcatattat 8965134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 338
Target Start/End: Complemental strand, 23705227 - 23705184
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatatta 338  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||    
T  23705227 catccccgtgagcttagctcagttggtagggatattgcatatta 23705184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 24680159 - 24680116
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  24680159 atccccgtgagcttagctcagttggtagggatattgcatattat 24680116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 26868346 - 26868389
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  26868346 atccccgtgagcttagctcagttggtagggatattgcatattat 26868389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 26919541 - 26919498
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  26919541 atccccgtgagcttagctcagttggtagggatattgcatattat 26919498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 37935858 - 37935901
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  37935858 atccccgtgagcttagctcagttggtagggatattgcatattat 37935901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 39023172 - 39023215
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  39023172 atccccgtgagcttagctcagttggtagggatattgcatattat 39023215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 43147457 - 43147414
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  43147457 atccccgtgagcttagctcagttggtagggatattgcatattat 43147414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 43207666 - 43207709
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  43207666 atccccgtgagcttagctcagttggtagggatattgcatattat 43207709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 43596892 - 43596935
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  43596892 atccccgtgagcttagctcagttggtagggatattgcatattat 43596935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 46105532 - 46105575
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  46105532 atccccgtgagcttagctcagttggtagggatattgcatattat 46105575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 46775103 - 46775060
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  46775103 atccccgtgagcttagctcagttggtagggatattgcatattat 46775060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 48569249 - 48569206
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  48569249 atccccgtgagcttagctcagttggtagggatattgcatattat 48569206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 49901479 - 49901522
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  49901479 atccccgtgagcttagctcagttggtagggatattgcatattat 49901522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 29771363 - 29771329
Alignment:
Q  305 agcttagctcaattggtagggatattgcatattat 339  Q
    |||||||||||||||||||||||||||||||||||    
T  29771363 agcttagctcaattggtagggatattgcatattat 29771329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 338
Target Start/End: Complemental strand, 35219573 - 35219531
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatatta 338  Q
    |||||||| ||||||||||| ||||||||||||||||||||||    
T  35219573 atccccgtgagcttagctcagttggtagggatattgcatatta 35219531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 33530788 - 33530833
Alignment:
Q  294 tcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||| ||| ||||||||| |||||||||||||||||||||||||    
T  33530788 tcatcctcgtgagcttagcttaattggtagggatattgcatattat 33530833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 44602480 - 44602525
Alignment:
Q  294 tcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||||| ||||||||||| |||||||||||||||||| ||||    
T  44602480 tcatccccgtgagcttagctcagttggtagggatattgcattttat 44602525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 45849044 - 45849085
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatatt 337  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  45849044 atccccgtgagcttagctcagttggtagggatattgcatatt 45849085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 284
Target Start/End: Complemental strand, 46620728 - 46620671
Alignment:
Q  227 tttactttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    |||| ||||| ||||||||||||| ||| ||||| ||||||||||||||| |||||||    
T  46620728 tttatttttttattatctcaattatacccttaaacaacaactttttctataataaaga 46620671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 1458092 - 1458048
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||||| ||| |||||||||||||||||||    
T  1458092 catccccgtaagcttagctcagttgatagggatattgcatattat 1458048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 3764082 - 3764038
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||||| |||||||||||||| ||||||||    
T  3764082 catccccgtgagcttagctcagttggtagggatattacatattat 3764038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 7438340 - 7438288
Alignment:
Q  232 tttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    |||||||||||| |||||| ||| ||||| ||||||||||||||| |||||||    
T  7438340 tttttcattatcccaattatacccttaaacaacaactttttctataataaaga 7438288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 22230504 - 22230464
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  22230504 cccgtgagcttagctcagttggtagggatattgcatattat 22230464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 22788744 - 22788704
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  22788744 cccgtgagcttagctcagttggtagggatattgcatattat 22788704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 25235871 - 25235827
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||| | |||||||||||||||||||||||    
T  25235871 catccccgtgagcttagcttagttggtagggatattgcatattat 25235827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 40994173 - 40994133
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  40994173 cccgtgagcttagctcagttggtagggatattgcatattat 40994133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 43978008 - 43978048
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  43978008 cccgtgagcttagctcagttggtagggatattgcatattat 43978048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 45112185 - 45112141
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||    
T  45112185 catccccgtgagcttacctcagttggtagggatattgcatattat 45112141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 47934146 - 47934102
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||||| ||||||||||||| |||||||||    
T  47934146 catccccgtgagcttagctcagttggtagggatatggcatattat 47934102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 3036128 - 3036085
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| |||||| |||| |||||||||||||||||||||||    
T  3036128 atccccgtgagcttaactcagttggtagggatattgcatattat 3036085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 335
Target Start/End: Original strand, 3784913 - 3784948
Alignment:
Q  300 ccgtcagcttagctcaattggtagggatattgcata 335  Q
    |||| |||||||||||||||||||||||||||||||    
T  3784913 ccgtgagcttagctcaattggtagggatattgcata 3784948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 4234358 - 4234315
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||    
T  4234358 atccccgtgagcttagctcagttgatagggatattgcatattat 4234315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 4590243 - 4590286
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| || |||||||| |||||||||||||||||||||||    
T  4590243 atccccgtgagtttagctcagttggtagggatattgcatattat 4590286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 4958629 - 4958586
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||| ||| |||||||||||||||||||||||    
T  4958629 atccccgtgagcttagttcagttggtagggatattgcatattat 4958586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 9761112 - 9761155
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| |||||| |||| |||||||||||||||||||||||    
T  9761112 atccccgtgagcttacctcagttggtagggatattgcatattat 9761155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 11375962 - 11375919
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||    
T  11375962 atccccgtgagcttagctcagttgatagggatattgcatattat 11375919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 17872084 - 17872123
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcata 335  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  17872084 atccccgtgagcttagcttaattggtagggatattgcata 17872123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 21380255 - 21380212
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| || |||||||||||| |||||||||||||||||||    
T  21380255 atccccgtgagtttagctcaattgctagggatattgcatattat 21380212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 21935474 - 21935517
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||  ||||||||||| |||||||||||||||||||||||    
T  21935474 atccccgcaagcttagctcagttggtagggatattgcatattat 21935517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 339
Target Start/End: Original strand, 30217600 - 30217639
Alignment:
Q  300 ccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  30217600 ccgtgagcttagctcagttggtagggatattgcatattat 30217639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 339
Target Start/End: Original strand, 34353780 - 34353819
Alignment:
Q  300 ccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  34353780 ccgtgagcttagctcagttggtagggatattgcatattat 34353819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 35465432 - 35465475
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||    
T  35465432 atccccgtgagcttagctcagttggtagggatattgcattttat 35465475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 36132226 - 36132269
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| || ||||||||||||||||| ||||||||||||||    
T  36132226 atccccgtgagtttagctcaattggtaggaatattgcatattat 36132269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 42218747 - 42218790
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| | ||||||||| |||||||||||||||||||||||    
T  42218747 atccccgtgaacttagctcagttggtagggatattgcatattat 42218790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 45126129 - 45126172
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| ||||||||||||||| |||||||    
T  45126129 atccccgtgagcttagctcagttggtagggatattgtatattat 45126172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 48798276 - 48798319
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||    
T  48798276 atccccgtgagcttagctcagttggtagggatattgcattttat 48798319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 51512082 - 51512039
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| |||| |||||| |||||||||||||||||||||||    
T  51512082 atccccgtgagctgagctcagttggtagggatattgcatattat 51512039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 52798275 - 52798318
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| |||||| |||| |||||||||||||||||||||||    
T  52798275 atccccgtgagcttaactcagttggtagggatattgcatattat 52798318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 53376752 - 53376709
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||  |||||||||||||||||||||||||||||| ||||    
T  53376752 atccccgcgagcttagctcaattggtagggatattgcatgttat 53376709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 55238572 - 55238529
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||| | |||||||||||||||||||||||    
T  55238572 atccccgtgagcttagcttagttggtagggatattgcatattat 55238529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 55536377 - 55536420
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||| ||||||||||||||||    
T  55536377 atccccgtgagcttagctcagttggtaaggatattgcatattat 55536420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 55853181 - 55853138
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| ||||||| |||||||||||||||    
T  55853181 atccccgtgagcttagctcagttggtagagatattgcatattat 55853138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 27551152 - 27551102
Alignment:
Q  232 tttttcattatctcaattacaccattaaataacaactttttctatgataaa 282  Q
    |||||||||||| |||||| ||| ||||| ||||||||||||||| |||||    
T  27551152 tttttcattatcccaattatacccttaaacaacaactttttctataataaa 27551102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 35447755 - 35447702
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    ||||||||||||||||||||||| ||| ||||||   |||||||||||| |||||||    
T  35447755 ttactttttcattatctcaattatacccttaaat---aactttttctataataaaga 35447702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 39696401 - 39696367
Alignment:
Q  305 agcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||||| |||||||||||||||||||||||    
T  39696401 agcttagctcagttggtagggatattgcatattat 39696367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 51400214 - 51400161
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    |||||||||||||||| |||||| ||||||||||   |||||||||||| |||||||    
T  51400214 ttactttttcattatcccaattataccattaaat---aactttttctataataaaga 51400161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 339
Target Start/End: Complemental strand, 25726372 - 25726339
Alignment:
Q  306 gcttagctcaattggtagggatattgcatattat 339  Q
    |||||||||| |||||||||||||||||||||||    
T  25726372 gcttagctcagttggtagggatattgcatattat 25726339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 49757359 - 49757314
Alignment:
Q  294 tcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||||| ||| ||||||| |||||||| ||||||||||||||    
T  49757359 tcatccccgtgagcatagctcagttggtaggaatattgcatattat 49757314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 3815060 - 3815100
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||| | |||||||||||||||||||||||    
T  3815060 cccgtgagcttagcttagttggtagggatattgcatattat 3815100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 10417295 - 10417251
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||| | ||||||||||| |||||||||||||| ||||||||    
T  10417295 catccccatgagcttagctcagttggtagggatattacatattat 10417251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 24997504 - 24997464
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| |||||||||||||||||| ||||    
T  24997504 cccgtgagcttagctcagttggtagggatattgcattttat 24997464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 27743778 - 27743738
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||| ||||||| |||||||||||||||||||||||    
T  27743778 cccgtgagcgtagctcagttggtagggatattgcatattat 27743738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 28494873 - 28494929
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    |||| ||||||||||| |||||| ||  ||||| ||||||||||||||| |||||||    
T  28494873 ttaccttttcattatcccaattatactcttaaacaacaactttttctataataaaga 28494929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 337
Target Start/End: Original strand, 37251111 - 37251151
Alignment:
Q  297 tccccgtcagcttagctcaattggtagggatattgcatatt 337  Q
    ||||||| |||||| |||| |||||||||||||||||||||    
T  37251111 tccccgtgagcttaactcagttggtagggatattgcatatt 37251151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 276
Target Start/End: Original strand, 37830912 - 37830960
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctat 276  Q
    |||| ||||||||||| |||||| ||| ||||| |||||||||||||||    
T  37830912 ttacattttcattatcccaattatacccttaaacaacaactttttctat 37830960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 39697932 - 39697892
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| ||| |||||||||||||||||||    
T  39697932 cccgtgagcttagctcagttgatagggatattgcatattat 39697892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 45673648 - 45673692
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| |||||| |||| |||||||| ||||||||||||||    
T  45673648 catccccgtgagcttaactcagttggtaggaatattgcatattat 45673692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 49447117 - 49447161
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||| | ||||||||||| |||||| ||||||||||||||||    
T  49447117 catccccatgagcttagctcagttggtaaggatattgcatattat 49447161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 50457784 - 50457744
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| |||||| ||||||||||||||||    
T  50457784 cccgtgagcttagctcagttggtaaggatattgcatattat 50457744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 8962 - 9006
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  8962 catccccgtgagcttagctcagttggtagggatattgcatattat 9006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 4088 - 4044
Alignment:
Q  295 catccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  4088 catccccgtgagcttagctcagttggtagggatattgcatattat 4044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 93 - 50
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  93 atccccgtgagcttagctcagttggtagggatattgcatattat 50  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 17617 - 17660
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  17617 atccccgtgagcttagctcagttggtagggatattgcatattat 17660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 46523 - 46566
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  46523 atccccgtgagcttagctcagttggtagggatattgcatattat 46566  T

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Target: scaffold0121; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 339
Target Start/End: Original strand, 12002 - 12034
Alignment:
Q  307 cttagctcaattggtagggatattgcatattat 339  Q
    ||||||||| |||||||||||||||||||||||    
T  12002 cttagctcagttggtagggatattgcatattat 12034  T

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Target: scaffold0100 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 45881 - 45924
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  45881 atccccgtgagcttagctcagttggtagggatattgcatattat 45924  T

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Target: scaffold0088 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 10899 - 10856
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  10899 atccccgtgagcttagctcagttggtagggatattgcatattat 10856  T

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Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 59780 - 59823
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  59780 atccccgtgagcttagctcagttggtagggatattgcatattat 59823  T

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Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 266770 - 266727
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  266770 atccccgtgagcttagctcagttggtagggatattgcatattat 266727  T

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Target: scaffold1185 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1185
Description:

Target: scaffold1185; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 2448 - 2403
Alignment:
Q  294 tcatccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||||| ||| ||||||| |||||||||||||||||||||||    
T  2448 tcatccccgtgagcgtagctcagttggtagggatattgcatattat 2403  T

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Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 8898 - 8857
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatatt 337  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  8898 atccccgtgagcttagctcagttggtagggatattgcatatt 8857  T

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Target: scaffold0366 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 930 - 890
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  930 cccgtgagcttagctcagttggtagggatattgcatattat 890  T

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Target: scaffold0014 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 12331 - 12291
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  12331 cccgtgagcttagctcagttggtagggatattgcatattat 12291  T

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Target: scaffold1787 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1787
Description:

Target: scaffold1787; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 397 - 440
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| | ||||||||||||| |||||||||||||||||||    
T  397 atccccgtgaacttagctcaattgatagggatattgcatattat 440  T

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Target: scaffold0460 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 12456 - 12499
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||| ||||||| |||||||||||||||||||||||    
T  12456 atccccgtgagcgtagctcagttggtagggatattgcatattat 12499  T

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Target: scaffold0460; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 339
Target Start/End: Complemental strand, 13266 - 13233
Alignment:
Q  306 gcttagctcaattggtagggatattgcatattat 339  Q
    |||||||||| |||||||||||||||||||||||    
T  13266 gcttagctcagttggtagggatattgcatattat 13233  T

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Target: scaffold0275 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 8818 - 8861
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||    
T  8818 atccccgtgagcttagctcagttggtagggatattgcattttat 8861  T

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Target: scaffold0028 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 112105 - 112148
Alignment:
Q  296 atccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||||| |||||| |||| |||||||||||||||||||||||    
T  112105 atccccgtgagcttaactcagttggtagggatattgcatattat 112148  T

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Target: scaffold0025 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 65851 - 65817
Alignment:
Q  305 agcttagctcaattggtagggatattgcatattat 339  Q
    ||||||||||| |||||||||||||||||||||||    
T  65851 agcttagctcagttggtagggatattgcatattat 65817  T

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Target: scaffold1372 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1372
Description:

Target: scaffold1372; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 339
Target Start/End: Original strand, 1871 - 1904
Alignment:
Q  306 gcttagctcaattggtagggatattgcatattat 339  Q
    |||||||||| |||||||||||||||||||||||    
T  1871 gcttagctcagttggtagggatattgcatattat 1904  T

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Target: scaffold0288 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0288
Description:

Target: scaffold0288; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 339
Target Start/End: Original strand, 21263 - 21304
Alignment:
Q  298 ccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||| ||||||||| | |||||||||||||||||||||||    
T  21263 ccccgtgagcttagcttagttggtagggatattgcatattat 21304  T

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Target: scaffold0179 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 339
Target Start/End: Original strand, 5981 - 6022
Alignment:
Q  298 ccccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    |||||| ||||||||||| ||| |||||||||||||||||||    
T  5981 ccccgtgagcttagctcatttgatagggatattgcatattat 6022  T

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Target: scaffold0734 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 202
Target Start/End: Original strand, 3747 - 3787
Alignment:
Q  163 gaatctat-cttactttttcattattccaattatatcctta 202  Q
    |||||||| |||||||||||||| |||||||||||||||||    
T  3747 gaatctatacttactttttcattgttccaattatatcctta 3787  T

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Target: scaffold0690 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 3666 - 3706
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| |||||| |||| |||||||||||||||||||||||    
T  3666 cccgtgagcttaactcagttggtagggatattgcatattat 3706  T

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Target: scaffold0285 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 290
Target Start/End: Complemental strand, 16718 - 16659
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaagaccgttg 290  Q
    ||||||||||||||||| ||||||||| |||   |||||||||||| || ||||||| |||||    
T  16718 ttactttttcattatcttaattacaccctta---aacaactttttcaataataaagatcgttg 16659  T

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Target: scaffold0196 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 9284 - 9232
Alignment:
Q  232 tttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    ||||| ||||||| ||||| ||| ||||| ||||||||||||||| |||||||    
T  9284 ttttttattatcttaattatacccttaaacaacaactttttctataataaaga 9232  T

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Target: scaffold0063 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 56323 - 56363
Alignment:
Q  299 cccgtcagcttagctcaattggtagggatattgcatattat 339  Q
    ||||| |||||| ||||||||| ||||||||||||||||||    
T  56323 cccgtgagcttaactcaattggcagggatattgcatattat 56363  T

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Target: scaffold0037 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 57068 - 57124
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    ||||||||||||||||||||||| ||| ||||| || ||  |||||||| |||||||    
T  57068 ttactttttcattatctcaattatacccttaaacaataatattttctataataaaga 57124  T

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Target: scaffold0037; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 64193 - 64249
Alignment:
Q  228 ttactttttcattatctcaattacaccattaaataacaactttttctatgataaaga 284  Q
    ||||||||||||||||||||||| ||| ||||| || ||  |||||||| |||||||    
T  64193 ttactttttcattatctcaattatacccttaaacaataatattttctataataaaga 64249  T

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