View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3003_high_14 (Length: 227)
Name: NF3003_high_14
Description: NF3003
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3003_high_14 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 10 - 227
Target Start/End: Complemental strand, 40360300 - 40360083
Alignment:
| Q |
10 |
ttaaaatcttgttttaaattgcaatccacaaccgcaattattgcagtcacaataaatattcgataaaaccaaactcccatctaaagactaacattgttct |
109 |
Q |
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| T |
40360300 |
ttaaaatattgttttaaattgcaatccacaaccgcaattattgcagtcacaataaatattcgataaaaccaaactcccatctaaagactaacattgttcc |
40360201 |
T |
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| Q |
110 |
ttgtttcaaataggtacctcagattgttgaaagtgaaacaattacaaagagaaaagggaataagaacaagaaatttgggaaagtgagaactctactaaag |
209 |
Q |
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| T |
40360200 |
ttgtttcaaataggtacctgagattgttgaaagtgaaacaattacaaagagaaaagggaataagaacaagaaatttgggaaagtgagaactctactaaag |
40360101 |
T |
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| Q |
210 |
gttaagtcatgctaccac |
227 |
Q |
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|||||||||||||||||| |
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| T |
40360100 |
gttaagtcatgctaccac |
40360083 |
T |
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