View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3005_low_27 (Length: 235)

Name: NF3005_low_27
Description: NF3005
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3005_low_27
NF3005_low_27
[»] chr5 (27 HSPs)
chr5 (12-211)||(39422280-39422479)
chr5 (126-209)||(4583167-4583250)
chr5 (126-202)||(38972970-38973046)
chr5 (66-207)||(10127064-10127203)
chr5 (66-209)||(4920809-4920957)
chr5 (135-194)||(16311266-16311325)
chr5 (126-209)||(33727959-33728042)
chr5 (132-202)||(40187622-40187692)
chr5 (131-196)||(6092500-6092565)
chr5 (126-209)||(18207066-18207149)
chr5 (126-202)||(17853258-17853333)
chr5 (126-209)||(5908646-5908729)
chr5 (126-201)||(20973462-20973537)
chr5 (130-184)||(6155903-6155957)
chr5 (126-180)||(27900388-27900442)
chr5 (84-202)||(2681217-2681340)
chr5 (126-207)||(15890254-15890335)
chr5 (126-194)||(2412699-2412767)
chr5 (130-194)||(24207736-24207800)
chr5 (126-202)||(28568986-28569062)
chr5 (126-202)||(29245916-29245992)
chr5 (131-194)||(43523801-43523864)
chr5 (126-207)||(12866511-12866592)
chr5 (66-103)||(33420400-33420437)
chr5 (130-166)||(3573255-3573291)
chr5 (133-197)||(35167299-35167363)
chr5 (126-194)||(40517854-40517922)
[»] chr8 (32 HSPs)
chr8 (18-194)||(30481393-30481574)
chr8 (126-207)||(5858611-5858692)
chr8 (130-209)||(14155584-14155663)
chr8 (126-209)||(27932461-27932544)
chr8 (61-163)||(14186298-14186405)
chr8 (62-209)||(14687378-14687530)
chr8 (126-209)||(20399640-20399723)
chr8 (126-209)||(29108779-29108862)
chr8 (126-209)||(43113583-43113666)
chr8 (67-209)||(32303045-32303192)
chr8 (126-194)||(39445548-39445616)
chr8 (126-196)||(32392356-32392426)
chr8 (126-196)||(37960932-37961002)
chr8 (126-202)||(27056519-27056595)
chr8 (126-202)||(27777162-27777238)
chr8 (129-209)||(35215587-35215666)
chr8 (126-209)||(1012667-1012749)
chr8 (67-209)||(24927933-24928080)
chr8 (133-202)||(10297513-10297582)
chr8 (126-207)||(17220760-17220841)
chr8 (126-178)||(1063555-1063607)
chr8 (126-202)||(15068552-15068628)
chr8 (126-202)||(15173844-15173920)
chr8 (126-202)||(24568986-24569061)
chr8 (129-209)||(40248328-40248408)
chr8 (136-195)||(29918665-29918724)
chr8 (128-206)||(8545310-8545387)
chr8 (126-163)||(9642354-9642391)
chr8 (126-163)||(17469303-17469340)
chr8 (131-196)||(24189561-24189626)
chr8 (126-207)||(45236113-45236194)
chr8 (135-207)||(29416146-29416217)
[»] scaffold0157 (1 HSPs)
scaffold0157 (61-205)||(14836-14975)
[»] chr4 (39 HSPs)
chr4 (61-205)||(12505502-12505641)
chr4 (81-209)||(37349127-37349249)
chr4 (126-202)||(43309537-43309613)
chr4 (61-209)||(19883014-19883167)
chr4 (67-209)||(6382230-6382377)
chr4 (126-205)||(4741179-4741257)
chr4 (126-209)||(31918516-31918599)
chr4 (126-196)||(4737873-4737943)
chr4 (126-196)||(25941192-25941262)
chr4 (129-207)||(31752513-31752591)
chr4 (85-166)||(12825462-12825548)
chr4 (128-195)||(1724242-1724308)
chr4 (67-214)||(7608960-7609112)
chr4 (126-209)||(43553500-43553583)
chr4 (67-209)||(44317525-44317672)
chr4 (62-114)||(33516130-33516182)
chr4 (122-194)||(41914969-41915041)
chr4 (126-209)||(7985083-7985166)
chr4 (129-196)||(10302141-10302208)
chr4 (126-209)||(11028127-11028210)
chr4 (131-202)||(21956779-21956850)
chr4 (126-184)||(6482018-6482076)
chr4 (131-188)||(12075610-12075667)
chr4 (126-207)||(55826583-55826664)
chr4 (134-202)||(7334162-7334230)
chr4 (81-209)||(15987220-15987353)
chr4 (126-202)||(30673015-30673091)
chr4 (126-202)||(37107465-37107540)
chr4 (131-194)||(1866522-1866585)
chr4 (126-209)||(43893282-43893364)
chr4 (136-202)||(8843770-8843836)
chr4 (136-202)||(8856734-8856800)
chr4 (56-114)||(16575091-16575149)
chr4 (126-184)||(26564885-26564943)
chr4 (132-194)||(39086217-39086279)
chr4 (130-184)||(39375336-39375390)
chr4 (126-184)||(47239368-47239426)
chr4 (129-201)||(36306842-36306915)
chr4 (126-195)||(45065303-45065372)
[»] scaffold0198 (1 HSPs)
scaffold0198 (20-165)||(20740-20890)
[»] chr7 (44 HSPs)
chr7 (126-202)||(39317048-39317124)
chr7 (128-209)||(10072521-10072602)
chr7 (81-196)||(12980380-12980500)
chr7 (126-209)||(16866222-16866305)
chr7 (126-209)||(45380160-45380242)
chr7 (126-207)||(18125187-18125268)
chr7 (126-202)||(37182327-37182403)
chr7 (126-209)||(17885518-17885601)
chr7 (67-194)||(38139764-38139896)
chr7 (68-194)||(7779998-7780129)
chr7 (122-184)||(37103109-37103171)
chr7 (126-184)||(42908023-42908081)
chr7 (130-207)||(44658426-44658503)
chr7 (126-194)||(5377138-5377206)
chr7 (126-214)||(25905681-25905769)
chr7 (129-209)||(43507501-43507581)
chr7 (126-209)||(44734316-44734397)
chr7 (126-209)||(21702712-21702795)
chr7 (131-194)||(27063196-27063259)
chr7 (126-189)||(29014929-29014992)
chr7 (126-209)||(35074523-35074606)
chr7 (126-209)||(39455972-39456055)
chr7 (126-196)||(3157136-3157206)
chr7 (126-196)||(27896445-27896515)
chr7 (129-202)||(8906553-8906626)
chr7 (126-190)||(22973441-22973505)
chr7 (126-194)||(24753217-24753284)
chr7 (126-202)||(33841131-33841206)
chr7 (127-202)||(3274648-3274722)
chr7 (56-196)||(4101520-4101665)
chr7 (126-209)||(30650684-30650767)
chr7 (134-209)||(37579322-37579397)
chr7 (126-209)||(45885722-45885805)
chr7 (126-168)||(10995832-10995874)
chr7 (126-209)||(18825823-18825912)
chr7 (126-184)||(30839116-30839174)
chr7 (126-196)||(37218058-37218128)
chr7 (129-195)||(41741421-41741487)
chr7 (131-184)||(2472041-2472094)
chr7 (131-184)||(3909255-3909308)
chr7 (126-163)||(23475266-23475303)
chr7 (128-189)||(38152942-38153003)
chr7 (126-210)||(10990817-10990901)
chr7 (126-166)||(42005957-42005997)
[»] chr3 (30 HSPs)
chr3 (129-209)||(42243438-42243518)
chr3 (126-209)||(39655230-39655313)
chr3 (129-202)||(34119707-34119780)
chr3 (66-207)||(39728654-39728800)
chr3 (131-209)||(6738362-6738440)
chr3 (126-184)||(19111782-19111840)
chr3 (126-207)||(48390776-48390857)
chr3 (126-207)||(49580112-49580193)
chr3 (126-202)||(52572657-52572733)
chr3 (126-197)||(3414506-3414577)
chr3 (126-209)||(4557262-4557345)
chr3 (126-209)||(29284384-29284467)
chr3 (126-209)||(42758422-42758505)
chr3 (126-209)||(44953392-44953475)
chr3 (54-196)||(4553161-4553308)
chr3 (126-207)||(34026002-34026083)
chr3 (126-202)||(4016008-4016084)
chr3 (131-207)||(20087050-20087126)
chr3 (126-202)||(44252795-44252871)
chr3 (126-209)||(7469735-7469818)
chr3 (126-208)||(10043240-10043322)
chr3 (129-194)||(34154465-34154530)
chr3 (137-194)||(38347625-38347682)
chr3 (129-184)||(23910234-23910289)
chr3 (129-168)||(26207318-26207357)
chr3 (126-209)||(44639322-44639405)
chr3 (136-207)||(54317202-54317273)
chr3 (126-196)||(22535811-22535881)
chr3 (131-184)||(2490358-2490411)
chr3 (128-201)||(48305606-48305679)
[»] chr1 (33 HSPs)
chr1 (126-202)||(34085284-34085360)
chr1 (126-184)||(33293513-33293571)
chr1 (129-209)||(13798290-13798370)
chr1 (126-202)||(24710896-24710972)
chr1 (126-202)||(10778531-10778607)
chr1 (126-202)||(19572476-19572552)
chr1 (68-196)||(36187190-36187323)
chr1 (126-209)||(16408991-16409074)
chr1 (126-207)||(34611122-34611203)
chr1 (126-202)||(44615439-44615515)
chr1 (126-202)||(44793054-44793130)
chr1 (131-209)||(2514811-2514890)
chr1 (126-209)||(23968628-23968711)
chr1 (126-209)||(51421907-51421990)
chr1 (126-207)||(12495059-12495140)
chr1 (67-202)||(49250737-49250877)
chr1 (129-178)||(34673270-34673319)
chr1 (130-195)||(39616345-39616410)
chr1 (126-202)||(5181088-5181164)
chr1 (126-202)||(18354044-18354120)
chr1 (126-202)||(19003630-19003706)
chr1 (126-202)||(29871249-29871325)
chr1 (145-196)||(41476922-41476973)
chr1 (126-184)||(16237286-16237344)
chr1 (128-202)||(24236725-24236799)
chr1 (126-176)||(35936819-35936869)
chr1 (139-196)||(36617423-36617481)
chr1 (126-184)||(42707819-42707877)
chr1 (131-189)||(42728922-42728979)
chr1 (126-207)||(23490730-23490811)
chr1 (126-194)||(9982862-9982930)
chr1 (129-209)||(17134999-17135079)
chr1 (129-205)||(45866147-45866222)
[»] chr6 (25 HSPs)
chr6 (126-209)||(5863340-5863423)
chr6 (66-209)||(10188037-10188178)
chr6 (81-200)||(12678060-12678184)
chr6 (66-209)||(32853827-32853975)
chr6 (67-209)||(3483880-3484027)
chr6 (47-209)||(13769036-13769203)
chr6 (144-195)||(29341322-29341373)
chr6 (129-204)||(32054187-32054261)
chr6 (66-196)||(27738755-27738890)
chr6 (126-207)||(32532588-32532669)
chr6 (81-209)||(2367324-2367457)
chr6 (126-202)||(9442478-9442553)
chr6 (126-202)||(27534732-27534808)
chr6 (126-202)||(30986301-30986377)
chr6 (131-194)||(256464-256527)
chr6 (126-188)||(20349112-20349174)
chr6 (126-207)||(11762493-11762574)
chr6 (66-202)||(12141368-12141509)
chr6 (129-209)||(15498375-15498455)
chr6 (119-202)||(31496475-31496558)
chr6 (119-202)||(31501861-31501944)
chr6 (126-196)||(10142488-10142558)
chr6 (153-194)||(30816333-30816374)
chr6 (170-202)||(24225796-24225828)
chr6 (126-202)||(28079660-28079736)
[»] chr2 (28 HSPs)
chr2 (126-202)||(37472723-37472799)
chr2 (126-209)||(13830784-13830867)
chr2 (126-209)||(24414089-24414172)
chr2 (126-209)||(37106741-37106824)
chr2 (67-196)||(35248355-35248489)
chr2 (66-207)||(10920629-10920768)
chr2 (126-202)||(22900843-22900919)
chr2 (81-209)||(30846945-30847078)
chr2 (129-196)||(31942155-31942223)
chr2 (126-214)||(34214610-34214697)
chr2 (126-209)||(12341649-12341732)
chr2 (126-209)||(44746066-44746149)
chr2 (126-195)||(15546793-15546862)
chr2 (131-184)||(30978979-30979032)
chr2 (130-194)||(18106091-18106155)
chr2 (133-209)||(19104794-19104870)
chr2 (67-202)||(9632371-9632511)
chr2 (126-209)||(12193784-12193867)
chr2 (129-207)||(45115610-45115690)
chr2 (129-194)||(45256875-45256940)
chr2 (126-194)||(7314620-7314688)
chr2 (126-194)||(8915910-8915977)
chr2 (134-206)||(13954802-13954874)
chr2 (134-206)||(14096009-14096081)
chr2 (55-114)||(17845448-17845508)
chr2 (130-202)||(26755793-26755865)
chr2 (126-196)||(10208400-10208470)
chr2 (129-202)||(40734548-40734621)
[»] scaffold0009 (1 HSPs)
scaffold0009 (126-196)||(107361-107431)
[»] scaffold0036 (1 HSPs)
scaffold0036 (126-179)||(33441-33494)
[»] scaffold0184 (1 HSPs)
scaffold0184 (131-184)||(3022-3075)
[»] scaffold0189 (1 HSPs)
scaffold0189 (129-159)||(4309-4339)
[»] scaffold0008 (2 HSPs)
scaffold0008 (134-202)||(67805-67873)
scaffold0008 (134-202)||(75648-75716)


Alignment Details
Target: chr5 (Bit Score: 188; Significance: 1e-102; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 12 - 211
Target Start/End: Original strand, 39422280 - 39422479
Alignment:
Q  12 aggagcagagagaacttagagaagtgagtgccgtctaaaaggaataatgaattgattttttacattcaagacgggtttgggtataggttcagggtggata 111  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  39422280 aggagaagagagaacttagagaagtgagtgccgtctaaaaggaataatgaattgattttttacattcaagacgggtttgggtataggttcagggtgggta 39422379  T
Q  112 ctttatatcccccttcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgt 211  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39422380 ccttatatcccccttcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgt 39422479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 4583167 - 4583250
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    |||||||||||||||||||||||| | |||||||| || |||||||||||||||||||| ||||||||||| ||||| ||||||    
T  4583167 tcccatacccgtgttttgaaatcggggaaaacccatacccatatccaaacccaatcaaaacggggaaaacccgtcaaattgggt 4583250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 38972970 - 38973046
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||||||||| ||||||||||||| |||||||||||||||||| | ||||||| ||||| |||||||||||||||||    
T  38972970 tcccatacccatgttttgaaatcgggaaaaacccaaactcatacctaaacccagtcaaaacggggaaaacctgtcaa 38973046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 66 - 207
Target Start/End: Original strand, 10127064 - 10127203
Alignment:
Q  66 attttttacattcaagacgggtttgggtataggttcagggtggatactttatatcccccttcccatacccgtgttttgaaatcgagaaaaacccaaactc 165  Q
    ||||||||||||   ||||||||||||||| ||||| |||||| ||| | |||| ||| | |||||||||||||||||| |||| | |||||||| || |    
T  10127064 attttttacatttgggacgggtttgggtatgggttcggggtgggtacct-atatacccgt-cccatacccgtgttttgagatcggggaaaacccataccc 10127161  T
Q  166 atatccaaacccaatcaaagcggggaaaacctgtcaatttgg 207  Q
    ||| ||||||||| ||||| ||||||||||| ||||| ||||    
T  10127162 atacccaaacccagtcaaaacggggaaaacccgtcaaattgg 10127203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 66 - 209
Target Start/End: Original strand, 4920809 - 4920957
Alignment:
Q  66 attttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaaccca 160  Q
    ||||||||||||   ||||||||||||||| ||||| |||||||||| | |||| ||    ||| ||||||||||||||||||| |||| | ||||||||    
T  4920809 attttttacatttgggacgggtttgggtatgggttcggggtggatacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaaccca 4920908  T
Q  161 aactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
     || |||| ||||||||| ||||| ||| ||||||| ||||| ||||||    
T  4920909 tacccataaccaaacccagtcaaaacggagaaaacccgtcaaattgggt 4920957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 16311325 - 16311266
Alignment:
Q  135 cgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 194  Q
    |||||||||||||||  |||||| ||||||||||||||||||||||||||||||| ||||    
T  16311325 cgtgttttgaaatcggaaaaaactcaaactcatatccaaacccaatcaaagcgggaaaaa 16311266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 209
Target Start/End: Complemental strand, 33728042 - 33727959
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||||||||||||||||||| |||| | |||| ||| || |||||||||||||||||||| ||||||||| | ||||| ||||||    
T  33728042 tcccatacccgtgttttgagatcggggaaaatccatacccatatccaaacccaatcaaaacggggaaaatccgtcaaattgggt 33727959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 40187692 - 40187622
Alignment:
Q  132 acccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||||||||||||||| | | ||||||||||||||| |||||||||| |||||||| |||||||| |||||    
T  40187692 acccgtgttttgaaattggggaaaacccaaactcatttccaaacccagtcaaagcgaggaaaacccgtcaa 40187622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 6092565 - 6092500
Alignment:
Q  131 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacc 196  Q
    |||||||||||||| |||| |||||||||| || |||| ||||||||||||||| |||||||||||    
T  6092565 tacccgtgttttgagatcgggaaaaacccatacccatacccaaacccaatcaaaacggggaaaacc 6092500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 18207066 - 18207149
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    |||||||| || |||||||||||||| |||||||||||||||  ||||||||| ||||| |||| |||||  ||||| ||||||    
T  18207066 tcccatacacgagttttgaaatcgaggaaaacccaaactcatgcccaaacccagtcaaaacgggaaaaacacgtcaaattgggt 18207149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 17853333 - 17853258
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||||||||||||||| ||||||| | |||||||| |  |||| ||||||||||||||| ||||||||||| |||||    
T  17853333 tcccatacccgtgttt-gaaatcggggaaaacccatatccatacccaaacccaatcaaaacggggaaaacccgtcaa 17853258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 209
Target Start/End: Complemental strand, 5908729 - 5908646
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    |||||||||||||||| || |||| | ||||| || || |||| |||||||||||||||  |||||||||| ||||| ||||||    
T  5908729 tcccatacccgtgtttcgagatcggggaaaactcatacccatacccaaacccaatcaaaatggggaaaacccgtcaaattgggt 5908646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 20973537 - 20973462
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtca 201  Q
    ||||||||||||||||  |||||| | |||||||| || |||| ||||||||| ||||| ||||||||||| ||||    
T  20973537 tcccatacccgtgtttgaaaatcggggaaaacccatacccataaccaaacccagtcaaaacggggaaaacccgtca 20973462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 6155957 - 6155903
Alignment:
Q  130 atacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 184  Q
    |||||||||||||||||||| | ||||||||||| |||| ||||||||| |||||    
T  6155957 atacccgtgttttgaaatcggggaaaacccaaacacatacccaaacccagtcaaa 6155903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 27900442 - 27900388
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaat 180  Q
    |||||||||| ||||||||||||| ||||||| |||||  |||||||||||||||    
T  27900442 tcccatacccatgttttgaaatcgggaaaaactcaaacctatatccaaacccaat 27900388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 202
Target Start/End: Original strand, 2681217 - 2681340
Alignment:
Q  84 gggtttgggtataggttcagggtggatactttatatccccctt------cccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaaccc 177  Q
    |||||||||||| ||||| |||||||||||  |||||||| ||      ||| |||| || ||||||||||| | |||||||||||||||  |||||| |    
T  2681217 gggtttgggtatgggttcggggtggatactc-atatccccattacccatcccgtacctgtattttgaaatcggggaaaacccaaactcatgcccaaactc 2681315  T
Q  178 aatcaaagcggggaaaacctgtcaa 202  Q
    | ||||| ||||||||||| |||||    
T  2681316 agtcaaatcggggaaaacccgtcaa 2681340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 15890254 - 15890335
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgg 207  Q
    ||||||||||||||||||||||||   |||||||| || |||| ||||||| | ||||| |||| |||||| ||||| ||||    
T  15890254 tcccatacccgtgttttgaaatcggagaaaacccatacacatagccaaacctagtcaaaacgggaaaaacccgtcaaattgg 15890335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 2412767 - 2412699
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 194  Q
    |||||||||||||||||||||| | ||||||  ||||| |||| |||||| ||||||||  ||||||||    
T  2412767 tcccatacccgtgttttgaaattgggaaaaattcaaacccatacccaaactcaatcaaaatggggaaaa 2412699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 24207736 - 24207800
Alignment:
Q  130 atacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 194  Q
    ||||| |||||||||||||| | ||||| ||||| |||| |||||| ||||||||||||| ||||    
T  24207736 atacctgtgttttgaaatcggggaaaactcaaacccatacccaaactcaatcaaagcgggaaaaa 24207800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 28569062 - 28568986
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||| ||||||  ||||||||||| | |||| ||||||||||| ||||||||| ||||| | ||||||||| |||||    
T  28569062 tcccgtacccgcattttgaaatcggggaaaatccaaactcatacccaaacccagtcaaatcagggaaaacccgtcaa 28568986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 29245992 - 29245916
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    ||||||||||||||||||||||||   ||||| || || |||| ||||||| | ||||| ||||||||||| |||||    
T  29245992 tcccatacccgtgttttgaaatcggagaaaactcatacccatacccaaacctagtcaaaacggggaaaacccgtcaa 29245916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 43523801 - 43523864
Alignment:
Q  131 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 194  Q
    ||||||| ||||||||||| | |||||||||||||||| |||||| || ||||| |||| ||||    
T  43523801 tacccgtattttgaaatcggggaaaacccaaactcatacccaaactcagtcaaatcgggaaaaa 43523864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 12866592 - 12866511
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgg 207  Q
    |||||||||| |||||||||||||   ||||| || || |||| ||||||||| |||||  |||||||||| ||||| ||||    
T  12866592 tcccatacccatgttttgaaatcggagaaaactcatacccatacccaaacccagtcaaaatggggaaaacccgtcaaattgg 12866511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 33420437 - 33420400
Alignment:
Q  66 attttttacattcaagacgggtttgggtataggttcag 103  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  33420437 attttctacattcaagacgggtttgggtatgggttcag 33420400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 3573255 - 3573291
Alignment:
Q  130 atacccgtgttttgaaatcgagaaaaacccaaactca 166  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  3573255 atacccgtgtcttgaaatcgaggaaaacccaaactca 3573291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 197
Target Start/End: Original strand, 35167299 - 35167363
Alignment:
Q  133 cccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacct 197  Q
    ||||||||||||||||    |||||| ||| |||||| |||||||||||||| | ||||||||||    
T  35167299 cccgtgttttgaaatcatagaaaaccgaaattcatattcaaacccaatcaaaacagggaaaacct 35167363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 194
Target Start/End: Original strand, 40517854 - 40517922
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 194  Q
    ||||||||||||||||||  |||| | |||||||| || |||| ||||||||| ||||| |||| ||||    
T  40517854 tcccatacccgtgttttgggatcggggaaaacccatacccatacccaaacccagtcaaaacgggaaaaa 40517922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 194
Target Start/End: Complemental strand, 30481574 - 30481393
Alignment:
Q  18 agagagaacttagagaagtgagtgccgtctaaaaggaataatgaattgattttttacattcaagacgggtttgggtataggttcagggtggatactttat 117  Q
    |||||||||||||||||||||||| |||||||||| |||| | |||| |||||||||||||  |||| |||||||||| ||||| |||||| |||  |||    
T  30481574 agagagaacttagagaagtgagtgtcgtctaaaagaaatagtaaattaattttttacattcgggacgagtttgggtatgggttcggggtgggtac-ctat 30481476  T
Q  118 atcc------cccttcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 194  Q
    ||||      | | || ||||| ||| ||||||||||  ||||||||||||||||||  |||||||||||||| | |||||||    
T  30481475 atcctcattactcgtctcatactcgtattttgaaatcaggaaaaacccaaactcatactcaaacccaatcaaaacagggaaaa 30481393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 5858692 - 5858611
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgg 207  Q
    ||||||||||||||||| |||||| ||||||||||||| |||| ||||||||||||||| ||||||||||| ||||| ||||    
T  5858692 tcccatacccgtgtttttaaatcgggaaaaacccaaacccatacccaaacccaatcaaaacggggaaaacccgtcaaattgg 5858611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 130 - 209
Target Start/End: Original strand, 14155584 - 14155663
Alignment:
Q  130 atacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||| ||| | ||||||||||| ||||| ||||||    
T  14155584 atacccgtgttttgaaatcgggaaaaacccaaactcatacccaaacccagtcataccggggaaaacccgtcaaattgggt 14155663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 27932461 - 27932544
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    |||||||||||||||||||||||| | |||||||| || |||| ||||||||| ||||| ||||||||||| ||||| ||||||    
T  27932461 tcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggt 27932544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 163
Target Start/End: Original strand, 14186298 - 14186405
Alignment:
Q  61 aattgattttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaa 155  Q
    |||| ||||| |||||||| ||||||||||||||| |||||||||||  ||| | |||||||    ||| ||||||||||||||||||||||||||||||    
T  14186298 aattaattttctacattcaggacgggtttgggtatgggttcagggtgagtacctatatatccgttacccatcccatacccgtgttttgaaatcgagaaaa 14186397  T
Q  156 acccaaac 163  Q
    || |||||    
T  14186398 actcaaac 14186405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 62 - 209
Target Start/End: Original strand, 14687378 - 14687530
Alignment:
Q  62 attgattttttacattcaagacgggtttgggtataggttcagggtggatactttatatccccctt------cccatacccgtgttttgaaatcgagaaaa 155  Q
    |||||||||  ||||||| |||| |||||||||| ||||| |||||||||| | |||||||  ||      |||||||| |||||||||||||| | |||    
T  14687378 attgattttccacattcaggacgagtttgggtatgggttcggggtggatacat-atatccctgtttctcgtcccatacctgtgttttgaaatcggggaaa 14687476  T
Q  156 acccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    |||||||  |||| |||||||||||||||| |||||||||| | ||| ||||||    
T  14687477 acccaaatccatacccaaacccaatcaaagtggggaaaacccgccaaattgggt 14687530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 20399640 - 20399723
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||||||||||||||||||||||||   ||||||||||| |||| ||||||||| ||||| ||||||||||  ||||| ||||||    
T  20399640 tcccatacccgtgttttgaaatcggagaaaacccaaacccatacccaaacccagtcaaaacggggaaaactcgtcaaattgggt 20399723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 209
Target Start/End: Complemental strand, 29108862 - 29108779
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    |||||||||| |||||| |||||| |||||||||| || |||| ||||||||| ||||| ||||||||||| ||||| ||||||    
T  29108862 tcccatacccatgttttaaaatcgggaaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggt 29108779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 209
Target Start/End: Complemental strand, 43113666 - 43113583
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||  |||||||| ||||||| ||||||||| || || ||||||    
T  43113666 tcccatgcccgtgttttgaaatcgggaaaaacccaatctcatacgcaaacccagtcaaagcagggaaaacccgttaaattgggt 43113583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 209
Target Start/End: Original strand, 32303045 - 32303192
Alignment:
Q  67 ttttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaa 161  Q
    |||||||||||   ||||||||||||||| ||||| |||||| ||| | |||| ||    ||| |||||||||||||||| || |||| | ||||||||     
T  32303045 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccat 32303144  T
Q  162 actcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    || |||| ||||||||| ||||| ||||||||||| ||||| ||||||    
T  32303145 acccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggt 32303192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 39445616 - 39445548
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 194  Q
    |||||||||||||||||||||||| |||||||||| || |||| ||||||| | ||||| |||||||||    
T  39445616 tcccatacccgtgttttgaaatcgggaaaaacccatacccatacccaaacctagtcaaaacggggaaaa 39445548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 32392426 - 32392356
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacc 196  Q
    |||||||| ||||||||||||||||||||||||||||  |||| | ||||||| | |||||||| ||||||    
T  32392426 tcccatactcgtgttttgaaatcgagaaaaacccaaatccataccaaaacccatttaaagcgggaaaaacc 32392356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 37961002 - 37960932
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacc 196  Q
    ||||||||||||||||| |||||| | |||||||||||||||| ||||||| | ||||| |||| ||||||    
T  37961002 tcccatacccgtgtttttaaatcggggaaaacccaaactcatacccaaacctagtcaaaacgggaaaaacc 37960932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 27056595 - 27056519
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    ||||||||| ||  |||||||||| ||||||||||||| |||| |||||||||  ||||||| |||||||| |||||    
T  27056595 tcccatacctgtactttgaaatcgggaaaaacccaaacccataaccaaacccagccaaagcgaggaaaacccgtcaa 27056519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 27777238 - 27777162
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||| |||| |||||||||||||| ||||||| ||||| |||| ||||||||| ||||| ||| ||||||| |||||    
T  27777238 tcccgtacctgtgttttgaaatcgggaaaaactcaaacacatacccaaacccagtcaaaacggagaaaacccgtcaa 27777162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 35215587 - 35215666
Alignment:
Q  129 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||||||||||||||||||||| | |||||||||| ||||| ||||||||  ||||| |||| |||||| ||||| ||||||    
T  35215587 catacccgtgttttgaaatcg-ggaaaacccaaaatcatacccaaacccggtcaaaacgggaaaaaccggtcaaattgggt 35215666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 1012667 - 1012749
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    |||||||| | |||||| |||||| | |||||||||||||||| |||||| |||||||| || |||||||| ||||| ||||||    
T  1012667 tcccatactcatgtttt-aaatcggggaaaacccaaactcatacccaaactcaatcaaaacgaggaaaacccgtcaaattgggt 1012749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 67 - 209
Target Start/End: Original strand, 24927933 - 24928080
Alignment:
Q  67 ttttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaa 161  Q
    |||||||||||   ||||||||||||||| ||||| |||||| ||| | |||| ||    ||| || ||||||||||||| || |||  | ||||||||     
T  24927933 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtctcatacccgtgtttcgagatcagggaaaacccat 24928032  T
Q  162 actcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    || |||| ||||||||| ||||| ||||||||||| ||||| ||||||    
T  24928033 acccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggt 24928080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 10297513 - 10297582
Alignment:
Q  133 cccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    ||||| ||||||||||| | |||||||||| ||| ||||||||||||| ||| | ||||||||| |||||    
T  10297513 cccgtattttgaaatcggggaaaacccaaattcacatccaaacccaataaaatcagggaaaacccgtcaa 10297582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 17220760 - 17220841
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgg 207  Q
    |||||||||||||||||||||||| | |||| ||| || |||| |||||| || |||||  |||||||||| ||||| ||||    
T  17220760 tcccatacccgtgttttgaaatcggggaaaatccatacccatacccaaactcagtcaaaatggggaaaacccgtcaaattgg 17220841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 178
Target Start/End: Original strand, 1063555 - 1063607
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaaccca 178  Q
    |||||||||||||||||||||||| |||||||||| || |||| ||| |||||    
T  1063555 tcccatacccgtgttttgaaatcgggaaaaacccatacccatacccacaccca 1063607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 15068628 - 15068552
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||| ||||||| ||||||||||| | ||||||| ||| |||| ||| ||||| ||||| ||||||||||| |||||    
T  15068628 tcccgtacccgtattttgaaatcggggaaaacccgaacccatacccagacccagtcaaatcggggaaaacccgtcaa 15068552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 15173920 - 15173844
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||| ||||||| ||||||||||| ||||||| ||||| |||| ||||||||| ||||| | | ||||||| |||||    
T  15173920 tcccgtacccgtattttgaaatcgggaaaaactcaaacacatacccaaacccagtcaaatcagagaaaacccgtcaa 15173844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 24568986 - 24569061
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||||||||| |||| |||||||| |||||| ||| || |||| | ||||||||||||| ||||||||||| |||||    
T  24568986 tcccatacccatgttgtgaaatcgggaaaaatccatacccatacctaaacccaatcaaa-cggggaaaacccgtcaa 24569061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 40248408 - 40248328
Alignment:
Q  129 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||||||||||||||||||||| | |||||  | || |||| ||||||||| ||||| |||| |||||| ||||| ||||||    
T  40248408 catacccgtgttttgaaatcggggaaaacatatacccatacccaaacccagtcaaaacgggaaaaacccgtcaaattgggt 40248328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 29918665 - 29918724
Alignment:
Q  136 gtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaac 195  Q
    |||||||||||||| ||||||| |||||||||| ||||| ||| ||||||| || |||||    
T  29918665 gtgttttgaaatcgggaaaaactcaaactcatacccaaaaccagtcaaagcaggaaaaac 29918724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 8545387 - 8545310
Alignment:
Q  128 ccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttg 206  Q
    ||||||||||||||||||||||   |||||||||||| ||| |||| || | | ||||||| ||||||| |||||||||    
T  8545387 ccatacccgtgttttgaaatcggagaaaacccaaacttatacccaatccaagttaaagcggagaaaacc-gtcaatttg 8545310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 9642391 - 9642354
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaac 163  Q
    |||||||||||||||||||||||| | |||||||||||    
T  9642391 tcccatacccgtgttttgaaatcggggaaaacccaaac 9642354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 163
Target Start/End: Original strand, 17469303 - 17469340
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaac 163  Q
    |||||||||||||||||||||||| | |||||||||||    
T  17469303 tcccatacccgtgttttgaaatcggggaaaacccaaac 17469340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 24189561 - 24189626
Alignment:
Q  131 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacc 196  Q
    |||||||||||| ||||| | || ||||||| | |||| ||||| |||||||||||||| ||||||    
T  24189561 tacccgtgttttaaaatcaaaaataacccaatcacatacccaaatccaatcaaagcgggaaaaacc 24189626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 45236113 - 45236194
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgg 207  Q
    |||||||||||||||||||||||  | ||||| || || ||||  ||||| || ||||| ||||||||||| ||||| ||||    
T  45236113 tcccatacccgtgttttgaaatcagggaaaactcatacccatactcaaactcagtcaaaacggggaaaacccgtcaaattgg 45236194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 207
Target Start/End: Complemental strand, 29416217 - 29416146
Alignment:
Q  135 cgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgg 207  Q
    |||||||| |||| ||||||||  |||||||||| |||||| || ||||| ||||||||||| ||||| ||||    
T  29416217 cgtgtttt-aaatagagaaaaagtcaaactcatacccaaactcagtcaaaacggggaaaacccgtcaaattgg 29416146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 205
Target Start/End: Original strand, 14836 - 14975
Alignment:
Q  61 aattgattttttacattcaagacgggtttgggtataggttcagggtggatactttatatcccccttcccatacccgtgttttgaaatcgagaaaaaccca 160  Q
    ||||||| |||||| |||| |||||||||||||||  ||||||||||| ||||  |||||||| ||     |||||||||||||||||| | ||||||||    
T  14836 aattgatgttttaccttcaggacgggtttgggtatgagttcagggtgggtacta-atatccccatt-----acccgtgttttgaaatcggggaaaaccca 14929  T
Q  161 aactcatatcc-aaacccaatcaaagcggggaaaacctgtcaattt 205  Q
    |||||||| || ||||||||||||||||| ||||||| ||||||||    
T  14930 aactcataccctaaacccaatcaaagcggagaaaacccgtcaattt 14975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 205
Target Start/End: Complemental strand, 12505641 - 12505502
Alignment:
Q  61 aattgattttttacattcaagacgggtttgggtataggttcagggtggatactttatatcccccttcccatacccgtgttttgaaatcgagaaaaaccca 160  Q
    ||||||| |||||| |||| |||||||||||||||  ||||||||||| ||||  |||||||| ||     |||||||||||||||||| | ||||||||    
T  12505641 aattgatgttttaccttcaggacgggtttgggtatgagttcagggtgggtacta-atatccccatt-----acccgtgttttgaaatcggggaaaaccca 12505548  T
Q  161 aactcatatcc-aaacccaatcaaagcggggaaaacctgtcaattt 205  Q
    |||||||| || ||||||||||||||||| ||||||| ||||||||    
T  12505547 aactcataccctaaacccaatcaaagcggagaaaacccgtcaattt 12505502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 81 - 209
Target Start/End: Original strand, 37349127 - 37349249
Alignment:
Q  81 gacgggtttgggtataggttcagggtggatactttatatcccccttcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaat 180  Q
    ||||||||||||||| |||||||||||||||| | |||| ||| ||     |||||||||||||||||| | ||||| |||||||||| ||||||||| |    
T  37349127 gacgggtttgggtatgggttcagggtggatacct-atatacccatt-----acccgtgttttgaaatcggggaaaactcaaactcatacccaaacccagt 37349220  T
Q  181 caaagcggggaaaacctgtcaatttgggt 209  Q
    |||| ||||||||||||||||| ||||||    
T  37349221 caaaacggggaaaacctgtcaaattgggt 37349249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 43309537 - 43309613
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||||||||||||||||||||||| ||||||||||||||||||  |||||||| ||||||||| ||||||| |||||    
T  43309537 tcccatacccgtgttttgaaatcgggaaaaacccaaactcatactcaaacccagtcaaagcggagaaaacccgtcaa 43309613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 209
Target Start/End: Complemental strand, 19883167 - 19883014
Alignment:
Q  61 aattgattttttacattcaagacgggtttgggtataggttcagggtggatactttatatcccc------cttcccatacccgtgttttgaaatcgagaaa 154  Q
    |||||||||| |||||||  |||| ||||| |||| ||||| |||||||||| | ||||||||      |||||| || ||||||||| |||||| | ||    
T  19883167 aattgattttatacattcgggacgagtttgtgtatcggttcggggtggatacct-atatccccgttacccttcccgtatccgtgttttaaaatcggggaa 19883069  T
Q  155 aacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||||||||||||||  ||||||||||||||||||| |||||| ||||| ||||||    
T  19883068 aacccaaactcatactcaaacccaatcaaagcgggaaaaacccgtcaaattgggt 19883014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 67 - 209
Target Start/End: Complemental strand, 6382377 - 6382230
Alignment:
Q  67 ttttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaa 161  Q
    |||||||||||   ||||||||||||||| ||||| |||||| ||| | |||| ||    ||| ||||||||||||||||||| ||||   ||||||||     
T  6382377 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggagaaaacccat 6382278  T
Q  162 actcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    || |||| ||||||||| ||||||||||||||||| ||||| ||||||    
T  6382277 acccatacccaaacccagtcaaagcggggaaaacccgtcaaattgggt 6382230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 205
Target Start/End: Complemental strand, 4741257 - 4741179
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaattt 205  Q
    |||||||||| |||||| |||||||| ||||| ||||||||||||||||| || ||||| |||||||||| |||||||||    
T  4741257 tcccatacccatgttttaaaatcgaggaaaactcaaactcatatccaaactcagtcaaa-cggggaaaacttgtcaattt 4741179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 209
Target Start/End: Complemental strand, 31918599 - 31918516
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    |||||||||||||||| || |||| | |||||||| ||||||| ||||||||| ||||| ||||||||||| ||||| ||||||    
T  31918599 tcccatacccgtgtttcgagatcggggaaaacccatactcatacccaaacccagtcaaaacggggaaaacccgtcaaattgggt 31918516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 4737943 - 4737873
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacc 196  Q
    |||||||||| |||||| |||||||| ||||||||||||||||| |||||| | |||||| ||||||||||    
T  4737943 tcccatacccatgttttaaaatcgaggaaaacccaaactcatattcaaaccaagtcaaaggggggaaaacc 4737873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 25941192 - 25941262
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacc 196  Q
    |||| ||||||||||||||||||| ||||||||||||| |||  ||||||| |||||||| ||||||||||    
T  25941192 tcccgtacccgtgttttgaaatcgggaaaaacccaaacacatgcccaaaccaaatcaaagtggggaaaacc 25941262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 31752513 - 31752591
Alignment:
Q  129 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgg 207  Q
    ||||||||||||||||||||| | |||||||| || |||||||||||||||||||| |||  |||||| ||||| ||||    
T  31752513 catacccgtgttttgaaatcggggaaaacccatacccatatccaaacccaatcaaaacggtaaaaacccgtcaaattgg 31752591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 166
Target Start/End: Complemental strand, 12825548 - 12825462
Alignment:
Q  85 ggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaaactca 166  Q
    |||||||||||||||||||||||| ||| | |||||||    ||| |||||||||||||||||||||||| | ||||||||||||||    
T  12825548 ggtttgggtataggttcagggtgggtacgtatatatccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaactca 12825462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 195
Target Start/End: Complemental strand, 1724308 - 1724242
Alignment:
Q  128 ccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaac 195  Q
    |||||||| ||||||||||||| ||||||||||||| |||| ||||||||| ||||| ||||||||||    
T  1724308 ccatacccatgttttgaaatcgggaaaaacccaaacccatacccaaacccagtcaaa-cggggaaaac 1724242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 214
Target Start/End: Original strand, 7608960 - 7609112
Alignment:
Q  67 ttttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaa 161  Q
    |||||||||||   ||||||||||||||| ||||| |||||| ||| | |||| ||    ||| |||||||||||||||| || |||| | ||||||||     
T  7608960 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccat 7609059  T
Q  162 actcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagt 214  Q
    || |||| ||||| ||| ||||| ||||||||||| ||||| |||||| ||||    
T  7609060 acccatacccaaatccagtcaaaacggggaaaacccgtcaaattgggtttagt 7609112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 43553500 - 43553583
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||||||||||||||||||||||||| ||||| | |||  |||| |||||| || ||||||||| ||||||| ||||| ||||||    
T  43553500 tcccatacccgtgttttgaaatcgaaaaaaatcgaaatgcatacccaaactcagtcaaagcggagaaaacccgtcaaattgggt 43553583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 209
Target Start/End: Original strand, 44317525 - 44317672
Alignment:
Q  67 ttttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaa 161  Q
    |||||||||||   ||||||||||||||| ||||| |||||| ||| | |||| ||    ||| |||||||||||||||| || |||| | ||||||||     
T  44317525 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccat 44317624  T
Q  162 actcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    || |||| ||||||||| ||||| ||||||||| | ||||| ||||||    
T  44317625 acccatacccaaacccagtcaaaacggggaaaatccgtcaaattgggt 44317672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 33516182 - 33516130
Alignment:
Q  62 attgattttttacattcaagacgggtttgggtataggttcagggtggatactt 114  Q
    ||||||||||||||||  |||||||||||||||||||||| |||||| |||||    
T  33516182 attgattttttacatttgagacgggtttgggtataggttcggggtgggtactt 33516130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 194
Target Start/End: Complemental strand, 41915041 - 41914969
Alignment:
Q  122 cccttcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 194  Q
    |||||||| ||||| | ||||||||||| | |||||||||||||||| || |||||| ||||| |||||||||    
T  41915041 cccttcccgtacccatattttgaaatcggggaaaacccaaactcatacccgaacccagtcaaatcggggaaaa 41914969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 209
Target Start/End: Complemental strand, 7985166 - 7985083
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    |||||||||| |||||||||||||   |||| ||||||| ||| ||||||||||||||| |  |||||||| ||||| ||||||    
T  7985166 tcccatacccatgttttgaaatcggagaaaatccaaacttatacccaaacccaatcaaaaccaggaaaacccgtcaaattgggt 7985083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 10302141 - 10302208
Alignment:
Q  129 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacc 196  Q
    |||||||||  |||||||||| | |||||| |||| |||| ||||||||||||||| |||||||||||    
T  10302141 catacccgtactttgaaatcggggaaaacctaaacccatacccaaacccaatcaaaacggggaaaacc 10302208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 11028127 - 11028210
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||||||||||||||||||| |||| | |||||||| || |||| ||||| ||| ||||| ||| ||||||| ||||| ||||||    
T  11028127 tcccatacccgtgttttgagatcggggaaaacccatacccatacccaaatccagtcaaaacggagaaaacccgtcaaattgggt 11028210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 21956850 - 21956779
Alignment:
Q  131 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||||||||||| ||||||  ||||||||||||||||| ||||| ||||| |||  ||| ||||||||||||    
T  21956850 tacccgtgttttaaaatcggaaaaaacccaaactcatacccaaatccaattaaaatgggaaaaacctgtcaa 21956779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 6482076 - 6482018
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 184  Q
    ||||||||||||||||| |||| | | ||||||||||| |||| |||||||||||||||    
T  6482076 tcccatacccgtgtttttaaattggggaaaacccaaacccatacccaaacccaatcaaa 6482018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 12075667 - 12075610
Alignment:
Q  131 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcgg 188  Q
    ||||||||||||||||| |  |||||| |||||||||| |||||||| ||||||||||    
T  12075667 tacccgtgttttgaaattggaaaaaactcaaactcatacccaaacccgatcaaagcgg 12075610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 55826664 - 55826583
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgg 207  Q
    ||||||||| |||||| || |||| | |||||||| ||||||||||||||||| ||||| | ||||||| | ||||| ||||    
T  55826664 tcccatacctgtgtttcgagatcggggaaaacccatactcatatccaaacccagtcaaaacagggaaaatccgtcaaattgg 55826583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 7334230 - 7334162
Alignment:
Q  134 ccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||||||||||||||| | |||| |||||  |||| ||||||||| |||||||||| |||||| |||||    
T  7334230 ccgtgttttgaaatcggggaaaatccaaatccatacccaaacccagtcaaagcgggaaaaacccgtcaa 7334162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 209
Target Start/End: Complemental strand, 15987353 - 15987220
Alignment:
Q  81 gacgggtttgggtataggttcagggtggata-ctttatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaac 175  Q
    ||||||||||||||| ||||| |||||| || || |||| ||    ||| ||||||||||||||||| |||||  | ||||| || || |||| ||||||    
T  15987353 gacgggtttgggtatgggttcggggtgggtatctatatacccgttacccatcccatacccgtgttttaaaatctgggaaaactcatacccatacccaaac 15987254  T
Q  176 ccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    |||||||||  || ||||||| ||||| ||||||    
T  15987253 ccaatcaaaatggagaaaacccgtcaaattgggt 15987220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 30673015 - 30673091
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||| ||||||| |||| ||||||   |||| ||||||||||| ||||||||||||||| | ||||||||| |||||    
T  30673015 tcccgtacccgtattttaaaatcggagaaaatccaaactcatacccaaacccaatcaaatcagggaaaacccgtcaa 30673091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 37107465 - 37107540
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||||||||||||||||||||| | | ||||||||||||||||  |||||||| |||||  ||| |||||| |||||    
T  37107465 tcccatacccgtgttttgaaattg-ggaaaacccaaactcatacacaaacccagtcaaaatgggaaaaacccgtcaa 37107540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 1866585 - 1866522
Alignment:
Q  131 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 194  Q
    ||||||| ||||||||||| |||||||||| ||||||| ||| ||| | ||||| |||||||||    
T  1866585 tacccgtattttgaaatcgggaaaaacccatactcatacccagacctagtcaaatcggggaaaa 1866522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 43893282 - 43893364
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    |||||||||||||||| || |||| | ||| |||| || |||| ||||||||| ||||| ||||||||||| ||||| ||||||    
T  43893282 tcccatacccgtgtttcgagatcggggaaa-cccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggt 43893364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 8843836 - 8843770
Alignment:
Q  136 gtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    ||||||| |||||| ||||||  ||||| |||||||||||||| |||||||  |||||||| |||||    
T  8843836 gtgttttaaaatcgggaaaaattcaaacacatatccaaacccagtcaaagcacggaaaacccgtcaa 8843770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 8856800 - 8856734
Alignment:
Q  136 gtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    ||||||| |||||| ||||||  ||||| |||||||||||||| |||||||  |||||||| |||||    
T  8856800 gtgttttaaaatcgggaaaaattcaaacacatatccaaacccagtcaaagcacggaaaacccgtcaa 8856734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 16575091 - 16575149
Alignment:
Q  56 taatgaattgattttttacattcaagacgggtttgggtataggttcagggtggatactt 114  Q
    |||| |||| |||||||||||| |||||| |||||||||||||||| | |||| |||||    
T  16575091 taataaattaattttttacatttaagacgagtttgggtataggttcggagtgggtactt 16575149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 26564885 - 26564943
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 184  Q
    ||||||||||| |||||||||||| | ||| | |||||||||| ||||||||| |||||    
T  26564885 tcccatacccgcgttttgaaatcggggaaagctcaaactcatacccaaacccagtcaaa 26564943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 39086217 - 39086279
Alignment:
Q  132 acccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 194  Q
    |||| |||| ||||||||   ||||| |||||||||||||||||||||||||| ||| |||||    
T  39086217 acccatgttgtgaaatcggagaaaactcaaactcatatccaaacccaatcaaaacggagaaaa 39086279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 39375336 - 39375390
Alignment:
Q  130 atacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 184  Q
    |||||||| ||||||||||| | |||| |||||||||||||||||| || |||||    
T  39375336 atacccgtattttgaaatcggggaaaagccaaactcatatccaaactcagtcaaa 39375390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 47239426 - 47239368
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 184  Q
    ||||||||||||||||| ||||||  ||||| ||| || |||||||||| |||||||||    
T  47239426 tcccatacccgtgttttaaaatcggaaaaaatccatacccatatccaaatccaatcaaa 47239368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 36306842 - 36306915
Alignment:
Q  129 catacccgtgttttgaaatc-gagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtca 201  Q
    |||||||||||||||||||| ||||||| || |||||||||  ||||| || | ||||  ||||||||||||||    
T  36306842 catacccgtgttttgaaatcggagaaaatccaaaactcatactcaaactcagtaaaagtagggaaaacctgtca 36306915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 195
Target Start/End: Original strand, 45065303 - 45065372
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaac 195  Q
    |||| ||||||| ||||||||||||| |||||| ||||  ||| ||||||||| |||||  |||||||||    
T  45065303 tcccgtacccgtattttgaaatcgaggaaaacctaaacctatacccaaacccagtcaaattggggaaaac 45065372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 20890 - 20740
Alignment:
Q  20 agagaacttagagaagtgagtgccgtctaaaaggaataatgaattgattttttacattcaagacgggtttgggtataggttcagggtggatactttatat 119  Q
    ||||||||||||||||||||||  |||||||| ||||||| ||||||||||||||||||   ||||||||| |||| |||||  |||||||| |||||||    
T  20890 agagaacttagagaagtgagtgttgtctaaaacgaataataaattgattttttacattcggaacgggtttgagtatgggttcgaggtggata-tttatat 20792  T
Q  120 cc------cccttcccatacccgtgttttgaaatcgagaaaaacccaaactc 165  Q
    ||      ||| || ||||| || |||||||||||| |||||| ||||||||    
T  20791 ccccattacccgtctcatactcgagttttgaaatcgggaaaaatccaaactc 20740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 1e-21; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 39317048 - 39317124
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||||||||||||||||||||||||| ||||| || ||||||||||||||||| ||||| ||||||||||| |||||    
T  39317048 tcccatacccgtgttttgaaatcgaggaaaactcatactcatatccaaacccagtcaaaacggggaaaacccgtcaa 39317124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 209
Target Start/End: Original strand, 10072521 - 10072602
Alignment:
Q  128 ccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    |||||||||||||||||||||| | |||||||| || |||| ||||||||| ||||| ||||||||||| ||||| ||||||    
T  10072521 ccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggt 10072602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 81 - 196
Target Start/End: Original strand, 12980380 - 12980500
Alignment:
Q  81 gacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaac 175  Q
    ||||||||||||||| ||||| |||||| ||||| |||| ||    ||| |||||||||||||||||||||||| | |||||| |||| |||| ||||||    
T  12980380 gacgggtttgggtatgggttcggggtgggtacttatatacccattacccgtcccatacccgtgttttgaaatcggggaaaaccaaaacccatacccaaac 12980479  T
Q  176 ccaatcaaagcggggaaaacc 196  Q
    ||| |||||  ||||||||||    
T  12980480 ccagtcaaaatggggaaaacc 12980500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 16866222 - 16866305
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||||||||||||||||||| |||| | |||||||| || |||| ||||||||| ||||| ||||||||||| ||||| ||||||    
T  16866222 tcccatacccgtgttttgagatcggggaaaacccatacccataaccaaacccagtcaaaacggggaaaacccgtcaaattgggt 16866305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 45380160 - 45380242
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    |||||||||||| ||||||||||| |||||||||| || |||||||||||||| ||||| | ||||||||| ||||| ||||||    
T  45380160 tcccatacccgtattttgaaatcgggaaaaacccatacccatatccaaacccagtcaaaacagggaaaacc-gtcaaattgggt 45380242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 18125268 - 18125187
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgg 207  Q
    |||||||||||||||| || |||| |||||||||| |||||||  |||||||| ||||| ||||||||||| ||||| ||||    
T  18125268 tcccatacccgtgtttcgagatcgggaaaaacccatactcatacacaaacccagtcaaaacggggaaaacccgtcaaattgg 18125187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 37182327 - 37182403
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||||||||||||||||||| |||   |||||||| ||||||| ||||||||| ||||| ||||||||||| |||||    
T  37182327 tcccatacccgtgttttgaattcggagaaaacccatactcatacccaaacccagtcaaaacggggaaaacccgtcaa 37182403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 17885518 - 17885601
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    |||||||||| |||||| |||||| | |||||||| || ||||| |||||||| ||||| ||||||||||| ||||| ||||||    
T  17885518 tcccatacccatgttttaaaatcggggaaaacccatacccatattcaaacccagtcaaaacggggaaaacccgtcaaattgggt 17885601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 194
Target Start/End: Complemental strand, 38139896 - 38139764
Alignment:
Q  67 ttttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaa 161  Q
    |||||||||||  |||||||||||| ||| ||||| |||||| ||||| ||||  |    ||| |||||||| ||||||||||||| | | ||||||||     
T  38139896 ttttttacatttgagacgggtttggttatgggttcggggtgggtacttatatactcattacccgtcccatactcgtgttttgaaattggggaaaacccat 38139797  T
Q  162 actcatatccaaacccaatcaaagcggggaaaa 194  Q
    || |||||||||||||| ||||| |||||||||    
T  38139796 acccatatccaaacccagtcaaaacggggaaaa 38139764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 194
Target Start/End: Original strand, 7779998 - 7780129
Alignment:
Q  68 tttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatccc----ccttcccatacccgtgttttgaaatcgagaaaaacccaaa 162  Q
    ||||||||||   ||||||||||||||||||||| |||||| ||| | |||| ||     || ||||||||||||||||||| |||| | |||||||| |    
T  7779998 tttttacatttgggacgggtttgggtataggttcggggtgggtacctatatacccattatccgtcccatacccgtgttttgagatcggggaaaacccata 7780097  T
Q  163 ctcatatccaaacccaatcaaagcggggaaaa 194  Q
    | |||| ||||||||| ||||| |||||||||    
T  7780098 cccatacccaaacccagtcaaaacggggaaaa 7780129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 37103171 - 37103109
Alignment:
Q  122 cccttcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 184  Q
    |||||||| ||||||| ||||||||||  ||||||| |||||| |||||||||||||||||||    
T  37103171 cccttcccgtacccgtattttgaaatcaggaaaaacacaaacttatatccaaacccaatcaaa 37103109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 42908081 - 42908023
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 184  Q
    |||| ||||||| ||||||||||| | |||||||||||||||| |||||||||||||||    
T  42908081 tcccgtacccgtattttgaaatcggggaaaacccaaactcatacccaaacccaatcaaa 42908023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 207
Target Start/End: Complemental strand, 44658503 - 44658426
Alignment:
Q  130 atacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgg 207  Q
    |||||||||||||||||||| ||||||| || || |||| ||||||||| ||||| || |||||||| ||||| ||||    
T  44658503 atacccgtgttttgaaatcgggaaaaactcatacccatacccaaacccagtcaaaacgaggaaaacccgtcaaattgg 44658426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 194
Target Start/End: Original strand, 5377138 - 5377206
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 194  Q
    ||||||||| |||||||||||||| | ||||||||||||||||  ||| |||||||||| |||| ||||    
T  5377138 tcccatacctgtgttttgaaatcggggaaaacccaaactcatactcaaccccaatcaaaacgggaaaaa 5377206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 214
Target Start/End: Original strand, 25905681 - 25905769
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagt 214  Q
    ||||||||| ||||||||| || | | |||||||| || |||| ||||||||| |||||  |||||||||||||||| |||||| ||||    
T  25905681 tcccatacctgtgttttgagattggggaaaacccatacccatacccaaacccagtcaaaaaggggaaaacctgtcaaattgggtttagt 25905769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 43507501 - 43507581
Alignment:
Q  129 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||||||| ||||||||||||| | |||||||| ||| ||| ||||||||| ||||| |||||||||||  |||| ||||||    
T  43507501 catacccatgttttgaaatcggggaaaacccatacttatacccaaacccagtcaaaacggggaaaacccatcaaattgggt 43507581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 209
Target Start/End: Complemental strand, 44734397 - 44734316
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    |||||||||||||||||||||||||||||||| || || |||  ||||||||| |||||   ||||||||| ||||| ||||||    
T  44734397 tcccatacccgtgttttgaaatcgagaaaaacacatacacattcccaaacccagtcaaa--agggaaaacccgtcaaattgggt 44734316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 21702712 - 21702795
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    |||||||||||||||| || |||| | |||||||| ||||||| ||||||||| ||||| |||| |||| | ||||| ||||||    
T  21702712 tcccatacccgtgtttcgagatcggggaaaacccatactcatacccaaacccagtcaaaacgggaaaaatccgtcaaattgggt 21702795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 27063196 - 27063259
Alignment:
Q  131 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 194  Q
    ||||||| ||||||||||||| ||||| |||||||||| ||||||||| ||||| | |||||||    
T  27063196 tacccgtattttgaaatcgaggaaaactcaaactcatacccaaacccagtcaaatcagggaaaa 27063259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 189
Target Start/End: Complemental strand, 29014992 - 29014929
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggg 189  Q
    |||| ||||||| ||||||||||| ||||||| |||||||||| | ||||||||||||| ||||    
T  29014992 tcccgtacccgtattttgaaatcgggaaaaactcaaactcatacctaaacccaatcaaatcggg 29014929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 35074523 - 35074606
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||||||||||||||||| | |||| | |||||||| || |||| ||||||||| ||||| ||||||||||| ||| | ||||||    
T  35074523 tcccatacccgtgttttaagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtctaattgggt 35074606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 209
Target Start/End: Complemental strand, 39456055 - 39455972
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    |||||||||| ||||||||||||| | |||||||| |  |||| ||||||||| ||||| ||||||||||  ||||| ||||||    
T  39456055 tcccatacccatgttttgaaatcggggaaaacccatatccatacccaaacccagtcaaaacggggaaaactcgtcaaattgggt 39455972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 3157136 - 3157206
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacc 196  Q
    |||||||||| | ||||||||||| | |||||| |||| |||| ||||||| | |||||||||||||||||    
T  3157136 tcccatacccatattttgaaatcggggaaaacctaaacccatacccaaaccaagtcaaagcggggaaaacc 3157206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 27896515 - 27896445
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacc 196  Q
    |||||||||| |||||||||||   | ||||||||||| |||| |||||||||||||||||| | ||||||    
T  27896515 tcccatacccatgttttgaaataagggaaaacccaaacccatacccaaacccaatcaaagcgagaaaaacc 27896445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 8906626 - 8906553
Alignment:
Q  129 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    ||||| |||||||||||||||   ||||| ||||| |||| ||||| ||||||||||||| ||||||| |||||    
T  8906626 catactcgtgttttgaaatcggagaaaactcaaacccatacccaaatccaatcaaagcggagaaaacccgtcaa 8906553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 22973441 - 22973505
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcgggg 190  Q
    |||| ||||||| ||||||||||| | ||||||||||| |||| ||||||||| ||||| |||||    
T  22973441 tcccgtacccgtattttgaaatcgtggaaaacccaaacccatacccaaacccagtcaaatcgggg 22973505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 194
Target Start/End: Original strand, 24753217 - 24753284
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 194  Q
    ||||||||||||||||||| |||| | |||||||| || |||||||||||||| ||||| ||| |||||    
T  24753217 tcccatacccgtgttttgagatcg-ggaaaacccatacccatatccaaacccagtcaaaacggagaaaa 24753284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 33841131 - 33841206
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||||||||||||||||||||||| | ||||| |||| |||||  |||| ||| |||||||||| |||||| |||||    
T  33841131 tcccatacccgtgttttgaaatcggggaaaactcaaattcatactcaaa-ccagtcaaagcgggaaaaacccgtcaa 33841206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 3274722 - 3274648
Alignment:
Q  127 cccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||||||| ||||||| |||||||||||||||||||||| ||  |||||| | ||| | |||||||||||| ||||    
T  3274722 cccataccagtgttttaaaatcgagaaaaacccaaactc-tactcaaacctattcataacggggaaaacctatcaa 3274648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 196
Target Start/End: Original strand, 4101520 - 4101665
Alignment:
Q  56 taatgaattgattttttacattcaagacgggtttgggtataggttcagggtggatactttatatccc------ccttcccatacccgtgttttgaaatcg 149  Q
    |||| ||||||||||  ||||||| |||||||| |||||| |||||||| ||| ||| | |||||||      || |||  |||| |||||||||||||     
T  4101520 taataaattgattttcaacattcaggacgggttagggtatgggttcaggatgggtacat-atatccctgtaacccatcctgtacctgtgttttgaaatca 4101618  T
Q  150 agaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacc 196  Q
     | ||||||||||| | |||||||||| | |||||||||| ||||||    
T  4101619 tggaaaacccaaacccttatccaaacctagtcaaagcgggaaaaacc 4101665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 30650684 - 30650767
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||||||||||||||||||| || | | ||||| || || |||| | ||||||| ||||| ||||||||||| ||||| ||||||    
T  30650684 tcccatacccgtgttttgagattggggaaaactcatacccatacctaaacccagtcaaaacggggaaaacccgtcaaattgggt 30650767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 209
Target Start/End: Original strand, 37579322 - 37579397
Alignment:
Q  134 ccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    |||||||| ||||||| |||||| |||||| |||| ||||||| | ||||| ||||||||||| ||| | ||||||    
T  37579322 ccgtgtttcgaaatcgggaaaaatccaaacccatacccaaacctagtcaaaacggggaaaacccgtctaattgggt 37579397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 209
Target Start/End: Complemental strand, 45885805 - 45885722
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||||||||||||||||||| |||| | ||||| || || |||| ||||||||| ||||| ||| ||||||| || || ||||||    
T  45885805 tcccatacccgtgttttgagatcggggaaaactcatacccatacccaaacccagtcaaaacggagaaaacccgttaaattgggt 45885722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 10995874 - 10995832
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcata 168  Q
    |||||||||||||| ||||||||| | ||||||||||||||||    
T  10995874 tcccatacccgtgtcttgaaatcggggaaaacccaaactcata 10995832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 209
Target Start/End: Complemental strand, 18825912 - 18825823
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactca------tatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    |||||||||||||||||||||||| | ||||||||||| ||       | ||||||||| ||||| ||||||||||| ||||| ||||||    
T  18825912 tcccatacccgtgttttgaaatcggggaaaacccaaacccacaccctcacccaaacccagtcaaaacggggaaaacccgtcaaattgggt 18825823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 30839174 - 30839116
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 184  Q
    |||||||||||| ||||||||||  | ||||| |||||||||| ||||||||| |||||    
T  30839174 tcccatacccgtattttgaaatcagggaaaactcaaactcatacccaaacccagtcaaa 30839116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 37218058 - 37218128
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacc 196  Q
    |||| |||| |||||||||||| |   ||||| |||||||||| ||||||||| ||||| |||||||||||    
T  37218058 tcccgtacctgtgttttgaaataggataaaactcaaactcatacccaaacccagtcaaaacggggaaaacc 37218128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 195
Target Start/End: Complemental strand, 41741487 - 41741421
Alignment:
Q  129 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaac 195  Q
    ||||||||||||||||||||| | |||||||| ||||||| ||||| ||| | |||  |||||||||    
T  41741487 catacccgtgttttgaaatcggggaaaacccatactcatacccaaatccagtaaaaatggggaaaac 41741421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 2472041 - 2472094
Alignment:
Q  131 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 184  Q
    ||||||| || ||||||||  |||||| |||||||||| |||||||||||||||    
T  2472041 tacccgtattatgaaatcggaaaaaactcaaactcatacccaaacccaatcaaa 2472094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 3909308 - 3909255
Alignment:
Q  131 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 184  Q
    ||||||||||| |||||   | ||||||||||||||||||||||| ||||||||    
T  3909308 tacccgtgtttcgaaattagggaaaacccaaactcatatccaaactcaatcaaa 3909255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 23475303 - 23475266
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaac 163  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  23475303 tcccaaacccgtgttttgaaatcgggaaaaacccaaac 23475266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 38152942 - 38153003
Alignment:
Q  128 ccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggg 189  Q
    |||||||| ||||||||||||| | |||||||| || |||| ||||||||| ||||| ||||    
T  38152942 ccatacccatgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacggg 38153003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 10990901 - 10990817
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtg 210  Q
    |||| ||||||| ||||||||||| | |||| || ||| ||||  ||||| || |||| |||||||||||||||| | |||||||    
T  10990901 tcccgtacccgtattttgaaatcggggaaaaacccaacccatactcaaactcattcaaggcggggaaaacctgtctaattgggtg 10990817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 42005957 - 42005997
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactca 166  Q
    |||||||| ||||||||||||| ||| ||||||||||||||    
T  42005957 tcccatacacgtgttttgaaattgaggaaaacccaaactca 42005997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 1e-21; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 42243438 - 42243518
Alignment:
Q  129 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||||||||||| ||||||||| |||||||||||||||||| ||||||||| ||||| ||||||||||| ||||| ||||||    
T  42243438 catacccgtgtattgaaatcgggaaaaacccaaactcatacccaaacccagtcaaaccggggaaaacccgtcaaattgggt 42243518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 209
Target Start/End: Complemental strand, 39655313 - 39655230
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||||||||||||||||||| |||| | |||||||| || |||| ||||||||||||||| ||||||||||| ||||| ||||||    
T  39655313 tcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattgggt 39655230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 34119707 - 34119780
Alignment:
Q  129 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||||||||||||| |||||| ||||||| |||||||||| |||||||||||||||  |||||||||| |||||    
T  34119707 catacccgtgttttaaaatcgggaaaaactcaaactcatacccaaacccaatcaaaatggggaaaacccgtcaa 34119780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 207
Target Start/End: Original strand, 39728654 - 39728800
Alignment:
Q  66 attttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaaccca 160  Q
    ||||||||||||   ||||||||||||||| ||||| |||||| ||||| |||| ||    ||| |||||||||||| |||||| |||||| |||||| |    
T  39728654 attttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccatcccatacccgtattttgagatcgaggaaaaccta 39728753  T
Q  161 aactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgg 207  Q
     ||||||| ||||||||| ||||| ||||||||| | ||||| ||||    
T  39728754 tactcatacccaaacccagtcaaaacggggaaaatccgtcaaattgg 39728800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 6738440 - 6738362
Alignment:
Q  131 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||||||||||||||||||| | |||||||| || |||| ||||||||| ||||| |||| |||||||||||| ||||||    
T  6738440 tacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacgggaaaaacctgtcaaattgggt 6738362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 19111782 - 19111840
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 184  Q
    |||| ||||||||||||||||||| ||||||| |||||||||| |||||||||||||||    
T  19111782 tcccgtacccgtgttttgaaatcgggaaaaactcaaactcatacccaaacccaatcaaa 19111840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 48390857 - 48390776
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgg 207  Q
    |||||||||||||||||||||||| | |||||||| || |||| ||||||||| ||||| ||||||||| | ||||| ||||    
T  48390857 tcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaatccgtcaaattgg 48390776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 49580112 - 49580193
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgg 207  Q
    ||||||||||||||||||| |||| | |||||||| || |||| ||||||||| ||||| ||||||||||| ||||| ||||    
T  49580112 tcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgg 49580193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 52572657 - 52572733
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    ||||||||||||||||||| |||||| ||||| || || |||| ||||||||| |||||  ||||||||||||||||    
T  52572657 tcccatacccgtgttttgagatcgaggaaaactcatacccatacccaaacccagtcaaaatggggaaaacctgtcaa 52572733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 197
Target Start/End: Complemental strand, 3414577 - 3414506
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacct 197  Q
    |||| ||| |||||||  |||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||    
T  3414577 tcccgtactcgtgtttgaaaatcgggaaaaactcaaacccataaccaaacccaatcaaagcggggaaaacct 3414506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 209
Target Start/End: Complemental strand, 4557345 - 4557262
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    |||||||||| |||||||||| || | ||||||||||| |||| ||||||||| ||||| |||| |||||| ||||| ||||||    
T  4557345 tcccatacccatgttttgaaaacggggaaaacccaaacccatacccaaacccagtcaaaacgggaaaaacccgtcaaattgggt 4557262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 29284384 - 29284467
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    |||||||||||||||| || |||| |||||||||| || |||| ||||||||| ||||| ||| ||||||| ||||| ||||||    
T  29284384 tcccatacccgtgtttcgagatcgggaaaaacccatacccatacccaaacccagtcaaaacggagaaaacccgtcaaattgggt 29284467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 42758422 - 42758505
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||||||||| |||||||||||||| |  ||||||||||||||| ||||||||| | ||| ||||||||| | ||||| ||||||    
T  42758422 tcccatacctgtgttttgaaatcgggggaaacccaaactcatacccaaacccagttaaaacggggaaaatccgtcaaattgggt 42758505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 209
Target Start/End: Complemental strand, 44953475 - 44953392
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||||||||||||||||||| |||| | |||||||| || || | ||||||||| ||||| ||||||||||| ||||| ||||||    
T  44953475 tcccatacccgtgttttgagatcggggaaaacccatacccaaacccaaacccagtcaaaacggggaaaacccgtcaaattgggt 44953392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 4553161 - 4553308
Alignment:
Q  54 aataatgaattgattttttacattcaagacgggtttgggtataggttcagggtggatactttatatcc------cccttcccatacccgtgttttgaaat 147  Q
    |||||| |||||||||||||||||| ||||||||||| |||| ||||| |||||  || |||||||||      ||| | ||  |||| |||||||||||    
T  4553161 aataataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgta-tttatatccctattacccgttccgcacccatgttttgaaat 4553259  T
Q  148 cgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacc 196  Q
    || ||||||| ||||| |||| | || |||| ||||||||| |||||||    
T  4553260 cgggaaaaactcaaacgcatacctaagcccagtcaaagcggagaaaacc 4553308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 34026002 - 34026083
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgg 207  Q
    ||||||||| |||||||||||||| | |||||||| || |||||||||||||| ||||| |||| |||| | ||||| ||||    
T  34026002 tcccatacctgtgttttgaaatcggggaaaacccatacccatatccaaacccagtcaaaacgggaaaaaaccgtcaaattgg 34026083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 4016084 - 4016008
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||||||||| ||||||||||||| | ||||||||||| |||| ||||||| | ||||| |||| |||||| |||||    
T  4016084 tcccatacccatgttttgaaatcggggaaaacccaaacccatacccaaacctagtcaaaacgggaaaaacccgtcaa 4016008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 20087050 - 20087126
Alignment:
Q  131 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgg 207  Q
    ||||||||||||||||||| | |||||||| || |||||||||||||| ||||| ||| ||||| | ||||| ||||    
T  20087050 tacccgtgttttgaaatcggggaaaacccatacccatatccaaacccagtcaaaacggagaaaatccgtcaaattgg 20087126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 44252795 - 44252871
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||||||||||||||| || |||| | |||||||| || |||| ||||||||| ||||| ||||||||||| |||||    
T  44252795 tcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaa 44252871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 209
Target Start/End: Complemental strand, 7469818 - 7469735
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    |||||||||||||||| || |||  | |||||||| || |||| ||||||||| ||||| ||||||||||| ||||| ||||||    
T  7469818 tcccatacccgtgtttcgagatcagggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggt 7469735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 10043322 - 10043240
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttggg 208  Q
    |||||||||| |||||||||| |  | ||||||||||| |||| ||||||||| |||||| || ||||||| ||||| |||||    
T  10043322 tcccatacccatgttttgaaaccagggaaaacccaaacccatacccaaacccagtcaaagtggagaaaacccgtcaaattggg 10043240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 34154465 - 34154530
Alignment:
Q  129 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 194  Q
    ||||||| ||||||||||||| | ||||| || || |||||||||||||| ||||| |||||||||    
T  34154465 catacccatgttttgaaatcggggaaaacacatacccatatccaaacccagtcaaaacggggaaaa 34154530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 194
Target Start/End: Original strand, 38347625 - 38347682
Alignment:
Q  137 tgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 194  Q
    ||||||||||||||||||||| |||||| ||||||||| ||||| ||| ||| |||||    
T  38347625 tgttttgaaatcgagaaaaacgcaaacttatatccaaagccaattaaaacggagaaaa 38347682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 23910289 - 23910234
Alignment:
Q  129 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 184  Q
    |||| |||||||||||||||||| ||||| ||||||||||  |||||||| |||||    
T  23910289 catatccgtgttttgaaatcgaggaaaactcaaactcatacacaaacccagtcaaa 23910234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 168
Target Start/End: Original strand, 26207318 - 26207357
Alignment:
Q  129 catacccgtgttttgaaatcgagaaaaacccaaactcata 168  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  26207318 catacccgtgttttgaaatcgggaaaaatccaaactcata 26207357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 44639322 - 44639405
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||||||||||||||||||| ||   | |||||||| || |||| ||||||||| |||||  |||||||||| ||||| ||||||    
T  44639322 tcccatacccgtgttttgagatatgggaaaacccatacccatacccaaacccagtcaaaatggggaaaaccagtcaaattgggt 44639405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 54317202 - 54317273
Alignment:
Q  136 gtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgg 207  Q
    |||||||||||||| | ||||| ||||| ||||  |||||||| ||||| ||||||||||| ||||| ||||    
T  54317202 gtgttttgaaatcggggaaaactcaaacacatactcaaacccagtcaaaacggggaaaacccgtcaaattgg 54317273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 22535881 - 22535811
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacc 196  Q
    ||||||| |||||||||||||| | | ||||| || || |||| ||||||||| ||||| |||||||||||    
T  22535881 tcccatatccgtgttttgaaattggggaaaactcatacccatacccaaacccagtcaaaacggggaaaacc 22535811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 2490358 - 2490411
Alignment:
Q  131 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 184  Q
    ||||||| ||||||||||| | ||||| ||||| |||||||||||||| |||||    
T  2490358 tacccgtattttgaaatcggggaaaactcaaacccatatccaaacccagtcaaa 2490411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 48305679 - 48305606
Alignment:
Q  128 ccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtca 201  Q
    |||||||||||||||||||| | | ||||| || || |||| ||||||||| |||||  |||||||||| ||||    
T  48305679 ccatacccgtgttttgaaattggggaaaactcatacccataaccaaacccagtcaaaatggggaaaacccgtca 48305606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 1e-21; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 34085284 - 34085360
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| ||||||| |||||    
T  34085284 tcccatactcgtgttttgaaatcgggaaaaacccaaactcatatcctaacccagtcaaagcggagaaaacccgtcaa 34085360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 33293571 - 33293513
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 184  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  33293571 tcccatacccgtgttttgaaatcgggaaaaacccaaactcatacccaaacccaatcaaa 33293513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 13798290 - 13798370
Alignment:
Q  129 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||| ||| | ||||||||||| || || ||||||    
T  13798290 catacccgtgttttgaaatcgggaaaaacccaaactcatacccaaacccagtcataccggggaaaacccgttaaattgggt 13798370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 24710896 - 24710972
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    ||||||||||||||||||| |||| | |||||||| ||||||||||||||||| ||||| ||||||||||| |||||    
T  24710896 tcccatacccgtgttttgagatcggggaaaacccatactcatatccaaacccagtcaaaacggggaaaacccgtcaa 24710972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 10778607 - 10778531
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||||||||||||||||||||||| |||||||  ||||||||| ||||||||| |||||||||  |||||| |||||    
T  10778607 tcccatacccgtgttttgaaatcgggaaaaacttaaactcatacccaaacccagtcaaagcggaaaaaacccgtcaa 10778531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 19572552 - 19572476
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||||||||||||||||||||||| |||||||||| || |||| ||||||||| |||||  |||||||||| |||||    
T  19572552 tcccatacccgtgttttgaaatcgggaaaaacccatacccatacccaaacccagtcaaaatggggaaaacccgtcaa 19572476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 68 - 196
Target Start/End: Complemental strand, 36187323 - 36187190
Alignment:
Q  68 tttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaaa 162  Q
    ||||||||||   ||||||||||||||| |||||||||||| ||| | |||| ||    ||| ||||||||||||||||||| |||| | |||||||| |    
T  36187323 tttttacatttgggacgggtttgggtatgggttcagggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccata 36187224  T
Q  163 ctcatatccaaacccaatcaaagcggggaaaacc 196  Q
    | |||| ||||||||| ||||| |||||||||||    
T  36187223 cccatacccaaacccagtcaaaacggggaaaacc 36187190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 16408991 - 16409074
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    |||||||||||||||||||||| | | |||||||| || |||| ||||||||| ||||| ||||||||||| ||||| ||||||    
T  16408991 tcccatacccgtgttttgaaattggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggt 16409074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 34611122 - 34611203
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgg 207  Q
    ||||||||||||||||||| |||| |||||||||| || |||| |||||  |||||||| ||||||||||| ||||| ||||    
T  34611122 tcccatacccgtgttttgagatcgggaaaaacccatacccatacccaaattcaatcaaaacggggaaaacccgtcaaattgg 34611203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 44615515 - 44615439
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    ||||||||||||||||| |||||  | |||||||||||||||| ||||||||| ||||| |||| |||||| |||||    
T  44615515 tcccatacccgtgtttttaaatcagggaaaacccaaactcatacccaaacccagtcaaaacgggaaaaacccgtcaa 44615439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 44793054 - 44793130
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    ||||||||||||||||| |||||  | |||||||||||||||| ||||||||| ||||| |||| |||||| |||||    
T  44793054 tcccatacccgtgtttttaaatcagggaaaacccaaactcatacccaaacccagtcaaaacgggaaaaacccgtcaa 44793130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 2514811 - 2514890
Alignment:
Q  131 tacccgtgttttgaaatcgagaaaaacccaaactcata-tccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||||||||||||||||| | | ||||||||||||||||  ||||||||||||||| |||||||||||  |||| ||||||    
T  2514811 tacccgtgttttgaaattggggaaaacccaaactcataccccaaacccaatcaaaacggggaaaacccatcaagttgggt 2514890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 23968628 - 23968711
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||||||||||||||||||||| || | |||||||| || |||| |||||||||||||||  |||||||| | ||||| ||||||    
T  23968628 tcccatacccgtgttttgaaaccggggaaaacccatacccatacccaaacccaatcaaaatggggaaaatccgtcaaattgggt 23968711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 51421907 - 51421990
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||||||||||||||||||| |||| |||||||||| || |||| ||||||||| |||||  ||||||||||  |||| ||||||    
T  51421907 tcccatacccgtgttttgagatcgggaaaaacccatacccatacccaaacccagtcaaaatggggaaaacccatcaaattgggt 51421990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 12495059 - 12495140
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgg 207  Q
    ||||||| |||||||||||||||| |||||||| |||| |||| | ||||||| |||||| |||||||| | ||||| ||||    
T  12495059 tcccatatccgtgttttgaaatcgggaaaaaccaaaacccataccgaaacccagtcaaagtggggaaaatccgtcaaattgg 12495140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 202
Target Start/End: Complemental strand, 49250877 - 49250737
Alignment:
Q  67 ttttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaa 161  Q
    |||||||||||   ||||||||||||||| |||||  ||||||||| | |||| ||    ||| ||||||||||||||||||| |||| | ||||| ||     
T  49250877 ttttttacatttgggacgggtttgggtatgggttcgaggtggatacctatatacccattacccgtcccatacccgtgttttgagatcggggaaaactcat 49250778  T
Q  162 actcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    || |||| ||||||||| ||||| ||| ||||||| |||||    
T  49250777 acccatacccaaacccagtcaaaacggagaaaacccgtcaa 49250737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 178
Target Start/End: Complemental strand, 34673319 - 34673270
Alignment:
Q  129 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaaccca 178  Q
    ||||||||||||||||||| | ||||||||||||| |||| |||||||||    
T  34673319 catacccgtgttttgaaattgggaaaaacccaaacccatacccaaaccca 34673270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 39616345 - 39616410
Alignment:
Q  130 atacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaac 195  Q
    |||||||||||||||||| | | |||||||| ||||||| |||||| || ||||| ||||||||||    
T  39616345 atacccgtgttttgaaataggggaaaacccatactcatacccaaactcagtcaaaacggggaaaac 39616410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 5181088 - 5181164
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||||||||||| ||||||||||| | |||||||| || |||| | ||||||| |||||  |||||||||| |||||    
T  5181088 tcccatacccgtattttgaaatcggggaaaacccatacccatacctaaacccagtcaaaatggggaaaacccgtcaa 5181164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 18354120 - 18354044
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||||||||| ||||||||||||| | |||||||| || ||||| |||| ||| ||||| |||| |||||| |||||    
T  18354120 tcccatacccatgttttgaaatcggggaaaacccatacccatattcaaatccagtcaaaacgggaaaaacccgtcaa 18354044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 19003706 - 19003630
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||||||||||| ||||| ||||| | ||||||| ||| |||| ||||||| | ||||| ||||||||||| |||||    
T  19003706 tcccatacccgtattttgtaatcggggaaaacccgaacccatacccaaacctagtcaaatcggggaaaacccgtcaa 19003630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 29871325 - 29871249
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||||||||| |||||||||||||   |||||||||||||||| ||||||  | ||||| || |||||||| |||||    
T  29871325 tcccatacccatgttttgaaatcggagaaaacccaaactcatacccaaacttagtcaaaacgaggaaaacccgtcaa 29871249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 41476973 - 41476922
Alignment:
Q  145 aatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacc 196  Q
    |||||| |||||||||||||||||| ||||| || |||||||||| ||||||    
T  41476973 aatcgaaaaaaacccaaactcatattcaaactcagtcaaagcgggaaaaacc 41476922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 16237344 - 16237286
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 184  Q
    |||| ||||||| ||||||||||| | |||||||||| |||||||||||| || |||||    
T  16237344 tcccttacccgtattttgaaatcggggaaaacccaaattcatatccaaactcagtcaaa 16237286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 24236799 - 24236725
Alignment:
Q  128 ccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    ||||||||||||||||| |||| | |||||||| || |||| | ||||||| ||||| |||| |||||| |||||    
T  24236799 ccatacccgtgttttgagatcggggaaaacccatacccatacctaaacccagtcaaaacgggaaaaacccgtcaa 24236725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 35936869 - 35936819
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacc 176  Q
    |||||||| |||| |||||||||| | |||||||||||||||| |||||||    
T  35936869 tcccatactcgtgatttgaaatcggggaaaacccaaactcatacccaaacc 35936819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 36617423 - 36617481
Alignment:
Q  139 ttttgaaatcgagaaaaacccaaactcatatccaaacccaatc-aaagcggggaaaacc 196  Q
    ||||||||||| | ||||| |||||||||||| |||||||||| ||||| |||||||||    
T  36617423 ttttgaaatcgtggaaaactcaaactcatatctaaacccaatcaaaagcagggaaaacc 36617481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 42707877 - 42707819
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 184  Q
    ||||||||||||||||||||||||   ||||| || ||||||| ||||||||| |||||    
T  42707877 tcccatacccgtgttttgaaatcggagaaaactcatactcatacccaaacccagtcaaa 42707819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 42728979 - 42728922
Alignment:
Q  131 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggg 189  Q
    ||||| ||||||||||||| |||||||  |||| |||||||||||| ||||||||||||    
T  42728979 tacccatgttttgaaatcgggaaaaacg-aaacccatatccaaaccaaatcaaagcggg 42728922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 23490811 - 23490730
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgg 207  Q
    |||||||||||||||| || |||| | |||||||| || |||| ||||||||| ||||| | || |||||| ||||| ||||    
T  23490811 tcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaacccagtcaaaacaggaaaaacccgtcaaattgg 23490730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 9982930 - 9982862
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 194  Q
    |||||| ||||||||||||||| | | ||||  |||||||||| ||||||||| ||||| ||| |||||    
T  9982930 tcccattcccgtgttttgaaattggggaaaattcaaactcatacccaaacccagtcaaaacggagaaaa 9982862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 17134999 - 17135079
Alignment:
Q  129 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||||||||||||||||||||| | |||||||| || || | ||||||||| ||||| | | ||||| | ||||| ||||||    
T  17134999 catacccgtgttttgaaatcggggaaaacccatacccacacccaaacccagtcaaaacagagaaaatccgtcaaattgggt 17135079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 205
Target Start/End: Complemental strand, 45866222 - 45866147
Alignment:
Q  129 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaattt 205  Q
    ||||||||||||||||||||| | |||||||| || |||| ||||||| | |||||  || ||||||| ||||||||    
T  45866222 catacccgtgttttgaaatcggggaaaacccatacccatacccaaacctagtcaaa-aggagaaaacccgtcaattt 45866147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 1e-18; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 209
Target Start/End: Complemental strand, 5863423 - 5863340
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    |||||||||||||||||||||||| | |||||||| || |||| ||||||||| ||||| ||||||||||| ||||| ||||||    
T  5863423 tcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggt 5863340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 66 - 209
Target Start/End: Complemental strand, 10188178 - 10188037
Alignment:
Q  66 attttttacattcaagacgggtttgggtataggttcagggtggatactttatatcccccttcccatacccgtgttttgaaatcgagaaaaacccaaactc 165  Q
    ||||||||||||   || |||||||||||| ||||| |||||| ||| | |||| ||| | |||||||||||||||||| |||| | |||||||| || |    
T  10188178 attttttacatttgggatgggtttgggtatgggttcggggtgggtacct-atatacccgt-cccatacccgtgttttgagatcggggaaaacccataccc 10188081  T
Q  166 atatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||| ||||||||| ||||| ||||||||||| ||||| ||||||    
T  10188080 atacccaaacccagtcaaaacggggaaaacccgtcaaattgggt 10188037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 81 - 200
Target Start/End: Complemental strand, 12678184 - 12678060
Alignment:
Q  81 gacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaac 175  Q
    ||||||||||||||| |||||||||||| ||| | |||| ||    ||| ||||||||| |||| ||||||||| | ||||| |||||||||| ||||||    
T  12678184 gacgggtttgggtatgggttcagggtgggtacctatataccctttacccgtcccatacctgtgtcttgaaatcggggaaaacgcaaactcatacccaaac 12678085  T
Q  176 ccaatcaaagcggggaaaacctgtc 200  Q
    ||| ||||| ||| |||||||||||    
T  12678084 ccagtcaaaacggcgaaaacctgtc 12678060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 66 - 209
Target Start/End: Original strand, 32853827 - 32853975
Alignment:
Q  66 attttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaaccca 160  Q
    ||||||||||||   ||||||||||||||| ||||| |||||| ||| | |||| ||    ||| ||||||||||||||||||| |||| | ||||||||    
T  32853827 attttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaaccca 32853926  T
Q  161 aactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
     || |||| ||||||||| ||||| ||| ||||||| ||||| ||||||    
T  32853927 tacccataaccaaacccagtcaaaacggagaaaacccgtcaaattgggt 32853975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 209
Target Start/End: Complemental strand, 3484027 - 3483880
Alignment:
Q  67 ttttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaa 161  Q
    |||||||||||   ||||||||||||||| ||||| |||||| ||| | |||| ||    ||| |||||||||||||||| || |||| | ||||||||     
T  3484027 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccatcccatacccgtgtttcgagatcggggaaaacccat 3483928  T
Q  162 actcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    || |||| ||||||||| ||||| ||||||||||| ||||| ||||||    
T  3483927 acacatacccaaacccagtcaaaacggggaaaacccgtcaaattgggt 3483880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 13769036 - 13769203
Alignment:
Q  47 taaaaggaataatgaattgattttttacattcaagacgggtttgggtataggttcagggtggata-ctttatatcc----cccttcccatacccgtgttt 141  Q
    |||||||| |||| |||||||||| |||||||| ||||||||||| ||| ||||| |||||| || || ||| |||    ||| |||||||||| |||||    
T  13769036 taaaaggagtaataaattgattttctacattcaggacgggtttggatatgggttctgggtgggtacctatatgtccgttacccgtcccatacccatgttt 13769135  T
Q  142 tgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    |||| ||| | |||||| |||| |||| | ||||||| |||||||| | |||||| || || ||||||    
T  13769136 tgaagtcggggaaaaccgaaacccatacctaaacccagtcaaagcgagtaaaacccgtgaaattgggt 13769203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 29341322 - 29341373
Alignment:
Q  144 aaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaac 195  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| ||||||    
T  29341322 aaatcgggaaaaacccaaactcatatccaaacccaatcaaaacggagaaaac 29341373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 204
Target Start/End: Complemental strand, 32054261 - 32054187
Alignment:
Q  129 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatt 204  Q
    ||||||| |||||||||||| ||||||||||||||||||| || |||||| | |||||||| |||||| |||||||    
T  32054261 catacccatgttttgaaatcaagaaaaacccaaactcata-cctaacccagtaaaagcgggaaaaacccgtcaatt 32054187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 196
Target Start/End: Original strand, 27738755 - 27738890
Alignment:
Q  66 attttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaaccca 160  Q
    ||||||||||||   ||||||||||||||| ||||| |||||| ||| | ||||||     ||| |||||||||||||||||||||||| | ||||||||    
T  27738755 attttttacatttgggacgggtttgggtatgggttcggggtgggtacatatatatctgttacccgtcccatacccgtgttttgaaatcggggaaaaccca 27738854  T
Q  161 aactcatatccaaacccaatcaaagcggggaaaacc 196  Q
     || |||| | ||||||| ||||| |||| ||||||    
T  27738855 tacccatacctaaacccagtcaaaacgggaaaaacc 27738890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 32532588 - 32532669
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgg 207  Q
    |||||||||||||||||||||||| | |||||||| |||||||  |||||||||| ||| |||  |||||| ||||| ||||    
T  32532588 tcccatacccgtgttttgaaatcggggaaaacccatactcatactcaaacccaatgaaaacggaaaaaacccgtcaaattgg 32532669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 209
Target Start/End: Original strand, 2367324 - 2367457
Alignment:
Q  81 gacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaac 175  Q
    ||||||||||||||| ||||| |||||| ||||| |||| ||    ||| ||||||||||||||||||| |||| | |||||||| || |||| ||||||    
T  2367324 gacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaac 2367423  T
Q  176 ccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    | | ||||| |||| ||||||  |||| ||||||    
T  2367424 ctagtcaaaacgggaaaaacccatcaaattgggt 2367457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 9442478 - 9442553
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||||||||||||||||||||||| ||||| |||| || |||| ||||| ||| ||||| ||||||||||| |||||    
T  9442478 tcccatacccgtgttttgaaatcgggaaaatcccatacccatacccaaa-ccagtcaaaacggggaaaacccgtcaa 9442553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 27534732 - 27534808
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||||||||||||||| || |||| | ||||| || || |||| ||||||||||||||| ||||||||||| |||||    
T  27534732 tcccatacccgtgtttcgagatcggggaaaactcatacccatacccaaacccaatcaaaacggggaaaacccgtcaa 27534808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 30986301 - 30986377
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    ||||||||||||||||||| |||| | |||||||| || |||| |||||| || ||||| ||||||||||| |||||    
T  30986301 tcccatacccgtgttttgagatcggggaaaacccatacccatacccaaactcagtcaaaacggggaaaacccgtcaa 30986377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 256527 - 256464
Alignment:
Q  131 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 194  Q
    ||||| ||||||||||||| | ||||| |||||||||| |||||| ||| ||||||||||||||    
T  256527 tacccatgttttgaaatcggggaaaactcaaactcatacccaaacacaaccaaagcggggaaaa 256464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 20349112 - 20349174
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcgg 188  Q
    |||||||||||||||||||||||| | |||| ||||||||||| | |||| |||| |||||||    
T  20349112 tcccatacccgtgttttgaaatcggggaaaatccaaactcataccaaaactcaataaaagcgg 20349174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 11762493 - 11762574
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgg 207  Q
    |||||||||| ||||| ||||||| |||||||| |||  |||||||||||||| | |||  |||||||||| ||||| ||||    
T  11762493 tcccatacccttgtttagaaatcgggaaaaacctaaatccatatccaaacccagtaaaaatggggaaaacccgtcaaattgg 11762574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 202
Target Start/End: Original strand, 12141368 - 12141509
Alignment:
Q  66 attttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaaccca 160  Q
    ||||||||||||   ||||||||||||||| ||||| |||||| ||| | |||| ||    ||| ||||||| ||||||||||| || | | ||||||||    
T  12141368 attttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgtcacccgtcccatatccgtgttttgagattggggaaaaccca 12141467  T
Q  161 aactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
     || | || ||||||||| ||||| ||||||||||| |||||    
T  12141468 tacccgtacccaaacccagtcaaaacggggaaaacccgtcaa 12141509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 15498375 - 15498455
Alignment:
Q  129 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||||||||||||||||||||| | |||||||| |  |||| ||||||||| ||||| ||| ||||||| || || ||||||    
T  15498375 catacccgtgttttgaaatcggggaaaacccatatccatacccaaacccattcaaaacggagaaaacccgttaaattgggt 15498455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 202
Target Start/End: Original strand, 31496475 - 31496558
Alignment:
Q  119 tcccccttcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||||| |||||||||| ||||| || |||| | ||||| || || |||| ||||||||| ||||| ||||||||||| |||||    
T  31496475 tcccccgtcccatacccatgtttcgagatcggggaaaactcatacccatacccaaacccagtcaaaacggggaaaacccgtcaa 31496558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 202
Target Start/End: Original strand, 31501861 - 31501944
Alignment:
Q  119 tcccccttcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||||| |||||||||| ||||| || |||| | ||||| || || |||| ||||||||| ||||| ||||||||||| |||||    
T  31501861 tcccccgtcccatacccatgtttcgagatcggggaaaactcatacccatacccaaacccagtcaaaacggggaaaacccgtcaa 31501944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 10142558 - 10142488
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacc 196  Q
    |||||||||||| |||||| |||| | |||||||| || |||| ||||||||| ||||| || ||||||||    
T  10142558 tcccatacccgttttttgagatcggggaaaacccatacccatacccaaacccagtcaaaacgaggaaaacc 10142488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 194
Target Start/End: Original strand, 30816333 - 30816374
Alignment:
Q  153 aaaacccaaactcatatccaaacccaatcaaagcggggaaaa 194  Q
    ||||| ||||| |||||||||||||||||||| |||||||||    
T  30816333 aaaactcaaacccatatccaaacccaatcaaaacggggaaaa 30816374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 202
Target Start/End: Original strand, 24225796 - 24225828
Alignment:
Q  170 ccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    ||||||||||||||| |||||||||||||||||    
T  24225796 ccaaacccaatcaaaacggggaaaacctgtcaa 24225828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 28079736 - 28079660
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||| ||||| ||||||||||||| | ||||||||||| |||| |||||| ||  ||||||||| || ||| |||||    
T  28079736 tcccgtacccatgttttgaaatcggggaaaacccaaacccatacccaaactcagccaaagcgggaaatacccgtcaa 28079660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 9e-17; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 37472799 - 37472723
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||||||||||||||||||||||| | |||| ||| ||||||| ||||||||| ||||| ||||||||||| |||||    
T  37472799 tcccatacccgtgttttgaaatcggggaaaatccatactcatacccaaacccagtcaaaacggggaaaacccgtcaa 37472723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 13830784 - 13830867
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||||||||||||||||||| |||||| |||||||| || |||| ||||||||| |||||  |||||||||| ||||| ||||||    
T  13830784 tcccatacccgtgttttgagatcgaggaaaacccatacccatacccaaacccagtcaaaatggggaaaacccgtcaaattgggt 13830867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 209
Target Start/End: Complemental strand, 24414172 - 24414089
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||||||||||||||||||| |||| | |||||| | || |||| ||||||||||||||| ||||||||||| ||||| ||||||    
T  24414172 tcccatacccgtgttttgagatcggggaaaaccgatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattgggt 24414089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 37106741 - 37106824
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    |||||||||||||||||||||||| | |||||||| || |||| |||||| || ||||| ||||||||||| ||||| ||||||    
T  37106741 tcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaactcagtcaaaacggggaaaacccgtcaaattgggt 37106824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 196
Target Start/End: Complemental strand, 35248489 - 35248355
Alignment:
Q  67 ttttttacattcaagacgggtttgggtataggttcagggtggatac-tttatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaa 161  Q
    |||| |||||||| ||||||||||||||| ||||| |||||| ||| |||||  ||    ||| |||||||||||||||||| ||||| | |||||||||    
T  35248489 ttttctacattcaggacgggtttgggtatgggttcggggtgggtacctttatcccctttacccgtcccatacccgtgttttgtaatcgtggaaaacccaa 35248390  T
Q  162 actcatatccaaacccaatcaaagcggggaaaacc 196  Q
    || | || |||||| ||||||||| | ||||||||    
T  35248389 acccgtacccaaactcaatcaaagtgaggaaaacc 35248355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 207
Target Start/End: Original strand, 10920629 - 10920768
Alignment:
Q  66 attttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcccccttcccatacccgtgttttgaaatcgagaaaaacccaaact 164  Q
    ||||||||||||   ||||| ||||||||| ||||| |||||||||| | |||||||    |||||||| |||||||||| ||||  ||||| ||| ||     
T  10920629 attttttacatttgggacggatttgggtatgggttcggggtggatacctatatatccg---tcccatactcgtgttttgagatcggaaaaaatccatacc 10920725  T
Q  165 catatccaaacccaatcaaagcggggaaaacctgtcaatttgg 207  Q
    |||| ||||||||| ||||| |||||||||||| |||| ||||    
T  10920726 catacccaaacccagtcaaaacggggaaaacctatcaaattgg 10920768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 22900843 - 22900919
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||||||||||||||||||||||| ||||||||||||| |||| ||| ||| | |||||| | |||||||| |||||    
T  22900843 tcccatacccgtgttttgaaatcgggaaaaacccaaacccatacccagaccaagtcaaagtgaggaaaacccgtcaa 22900919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 209
Target Start/End: Original strand, 30846945 - 30847078
Alignment:
Q  81 gacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaac 175  Q
    ||||||||||||||| ||||| |||||| ||| | |||| ||    ||| |||||||||||||||| || |||| | |||||||| || |||| ||||||    
T  30846945 gacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaac 30847044  T
Q  176 ccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||| ||||| ||||||||||| ||||| ||||||    
T  30847045 ccagtcaaaacggggaaaacccgtcaaattgggt 30847078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 31942223 - 31942155
Alignment:
Q  129 catacccgtgtttt-gaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacc 196  Q
    |||||||||||||| ||||||||| | ||||||||| |||||||||||||| |||||||||| ||||||    
T  31942223 catacccgtgtttttgaaatcgaggataacccaaacccatatccaaacccagtcaaagcgggaaaaacc 31942155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 214
Target Start/End: Complemental strand, 34214697 - 34214610
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagt 214  Q
    |||| ||||||||||||||||| ||||||||| ||||||||||   |||||||||||||||||  |||||| ||||| |||||| ||||    
T  34214697 tcccgtacccgtgttttgaaattgagaaaaactcaaactcatacaaaaacccaatcaaagcggaaaaaacc-gtcaaattgggtttagt 34214610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 12341649 - 12341732
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||||||||| |||||||||||||| | |||||||| || |||| |||||| || ||||| ||||||||||| ||||| ||||||    
T  12341649 tcccatacctgtgttttgaaatcggggaaaacccatacccatacccaaactcagtcaaaacggggaaaacccgtcaaattgggt 12341732  T

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Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 209
Target Start/End: Complemental strand, 44746149 - 44746066
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    |||||||  ||||||||||||||| | ||||||||||  |||| |||||| |||||||| ||||||||||| ||||| ||||||    
T  44746149 tcccatattcgtgttttgaaatcggggaaaacccaaatccatacccaaactcaatcaaaacggggaaaacccgtcaaattgggt 44746066  T

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Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 195
Target Start/End: Original strand, 15546793 - 15546862
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaac 195  Q
    |||||||||||||||||||||||| | ||||||||||| |||  ||| | ||| ||||||||||||||||    
T  15546793 tcccatacccgtgttttgaaatcggggaaaacccaaacccatgcccagatccagtcaaagcggggaaaac 15546862  T

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Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 30978979 - 30979032
Alignment:
Q  131 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 184  Q
    ||||||| ||||||||||| ||||||||||||||||||| |||||||| |||||    
T  30978979 tacccgtattttgaaatcgggaaaaacccaaactcatattcaaacccagtcaaa 30979032  T

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Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 18106155 - 18106091
Alignment:
Q  130 atacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 194  Q
    ||||||||||||||| |||| | |||||||| || |||||||||||||| ||||| |||||||||    
T  18106155 atacccgtgttttgagatcggggaaaacccatacccatatccaaacccagtcaaaacggggaaaa 18106091  T

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Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 209
Target Start/End: Complemental strand, 19104870 - 19104794
Alignment:
Q  133 cccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||||||||| ||||||| | |||||||||||||||| ||||||||||||||| |||  ||||||  |||| ||||||    
T  19104870 cccgtgtttggaaatcggggaaaacccaaactcatacccaaacccaatcaaaacggaaaaaacccatcaaattgggt 19104794  T

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Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 202
Target Start/End: Original strand, 9632371 - 9632511
Alignment:
Q  67 ttttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaa 161  Q
    |||||||||||   ||||||||||||||| ||||| |||||||||| | |||| ||    ||| |||||||||||||||| || |||| | ||||||||     
T  9632371 ttttttacatttgggacgggtttgggtatgggttcggggtggatacctatatacccattacccgtcccatacccgtgtttcgagatcggggaaaacccat 9632470  T
Q  162 actcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    || ||||  |||||||| ||||| |||| |||||| |||||    
T  9632471 acccatactcaaacccattcaaaacgggaaaaacccgtcaa 9632511  T

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Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 209
Target Start/End: Complemental strand, 12193867 - 12193784
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 209  Q
    ||||||||||||||| |||||||| ||||||| || ||||||| ||||||||| |||||   || |||||| ||||| ||||||    
T  12193867 tcccatacccgtgttctgaaatcgggaaaaacacatactcatacccaaacccagtcaaaatcggaaaaacccgtcaaattgggt 12193784  T

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Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 45115610 - 45115690
Alignment:
Q  129 catacccgtgttttgaaatcgagaaaaaccc--aaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgg 207  Q
    ||||||||||||||||||||||| ||||| |  | || |||| ||||||||| ||||| ||||||||||| ||||| ||||    
T  45115610 catacccgtgttttgaaatcgaggaaaactcatatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgg 45115690  T

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Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 45256875 - 45256940
Alignment:
Q  129 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 194  Q
    ||||||||||||||||||||| | ||||| || ||||||||||| ||||| ||||| |||| ||||    
T  45256875 catacccgtgttttgaaatcggggaaaactcatactcatatccacacccagtcaaaacgggaaaaa 45256940  T

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Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 7314688 - 7314620
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 194  Q
    |||||||| ||| |||| |||||| | |||||||| || |||||||||||||| ||||| |||||||||    
T  7314688 tcccatactcgtattttaaaatcggggaaaacccatacccatatccaaacccagtcaaaacggggaaaa 7314620  T

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Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 8915977 - 8915910
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 194  Q
    ||||||||||||||||||| |||||| |||||||| || ||||||||||| || ||||| |||| ||||    
T  8915977 tcccatacccgtgttttgagatcgag-aaaacccatacccatatccaaactcagtcaaaacgggaaaaa 8915910  T

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Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 13954802 - 13954874
Alignment:
Q  134 ccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttg 206  Q
    ||||||||| |||||| | ||||  ||||| |||| ||||||||| ||||||||  |||||||||||||||||    
T  13954802 ccgtgttttaaaatcggggaaaattcaaacacatacccaaacccagtcaaagcgtagaaaacctgtcaatttg 13954874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 14096009 - 14096081
Alignment:
Q  134 ccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttg 206  Q
    ||||||||| |||||| | ||||  ||||| |||| ||||||||| ||||||||  |||||||||||||||||    
T  14096009 ccgtgttttaaaatcggggaaaattcaaacacatacccaaacccagtcaaagcgtagaaaacctgtcaatttg 14096081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 17845508 - 17845448
Alignment:
Q  55 ataatgaattgatttttt-acattcaagacgggtttgggtataggttcagggtggatactt 114  Q
    ||||| |||||||||||| |||||| |||||||||||||||| |||| ||||||| |||||    
T  17845508 ataataaattgatttttttacattcgagacgggtttgggtatgggttaagggtgggtactt 17845448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 202
Target Start/End: Original strand, 26755793 - 26755865
Alignment:
Q  130 atacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||||| | |||| |||||||  |||||||||||||||| ||||||||| ||||| |||| |||||| |||||    
T  26755793 atacccatattttaaaatcgaagaaaacccaaactcatacccaaacccagtcaaatcgggaaaaacccgtcaa 26755865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 10208470 - 10208400
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacc 196  Q
    ||||||||||||||||| | || | | |||||||| || |||| ||||||||| ||||| |||||||||||    
T  10208470 tcccatacccgtgttttaagattggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacc 10208400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 40734621 - 40734548
Alignment:
Q  129 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||||||||||||  ||||||   |||||||||| ||||| ||||||| |||||||||||  |||||| |||||    
T  40734621 catacccgtgtttgaaaatcgctgaaaacccaaattcatacccaaaccaaatcaaagcggataaaacccgtcaa 40734548  T

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Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 107431 - 107361
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacc 196  Q
    ||||||||| |||||||||||||||||||||| |||||  ||| | |||||||||||||| ||||||||||    
T  107431 tcccatacctgtgttttgaaatcgagaaaaactcaaacctatacctaaacccaatcaaagtggggaaaacc 107361  T

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Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 33441 - 33494
Alignment:
Q  126 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaa 179  Q
    |||||||||||||||||||||||| | ||||||||||| |||| ||||||||||    
T  33441 tcccatacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaa 33494  T

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Target: scaffold0184 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 3022 - 3075
Alignment:
Q  131 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 184  Q
    ||||||| ||||||||||| | |||||||||||||||| ||||||||| |||||    
T  3022 tacccgtattttgaaatcggggaaaacccaaactcatacccaaacccagtcaaa 3075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 159
Target Start/End: Original strand, 4309 - 4339
Alignment:
Q  129 catacccgtgttttgaaatcgagaaaaaccc 159  Q
    |||||||||||||||||||||||||||||||    
T  4309 catacccgtgttttgaaatcgagaaaaaccc 4339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 67805 - 67873
Alignment:
Q  134 ccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||| |||| |||||| | |||| |||||| ||||  |||||||| ||||| |||||||||||||||||    
T  67805 ccgtattttaaaatcggggaaaatccaaacccatactcaaacccagtcaaatcggggaaaacctgtcaa 67873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 75648 - 75716
Alignment:
Q  134 ccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 202  Q
    |||| |||| |||||| | |||| |||||| ||||  |||||||| ||||| |||||||||||||||||    
T  75648 ccgtattttaaaatcggggaaaatccaaacccatactcaaacccagtcaaatcggggaaaacctgtcaa 75716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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