View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3006_low_21 (Length: 248)
Name: NF3006_low_21
Description: NF3006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3006_low_21 |
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Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 53462130 - 53462368
Alignment:
| Q |
1 |
aacatgtttaccagacaagggtcaataattttgagattaatcaacattagcctgcatatacatggaaccaagttattagtgtaggtttgttcatgtacaa |
100 |
Q |
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| T |
53462130 |
aacatgtttaccagacaagcgtcaataattttgagattaatcaacattagcctgcatatacatggaaccaagttattagtgtaggtttgttcatgtacaa |
53462229 |
T |
|
| Q |
101 |
aaggaaacattcgattagattgagtagatattgtatagttagcacaagaattaatgtttcctaaggtttgaagtcttaagaccaagtgactgaccatacg |
200 |
Q |
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| T |
53462230 |
aaggaaacattcgattagattgagtagatattgtatagttagcacaagaattaatgtttcctaaggtttgaagtcttaagaccaagtgactgaccatacg |
53462329 |
T |
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| Q |
201 |
gaaacaggacgtagtttcttagttcattttgtgtctgtg |
239 |
Q |
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| T |
53462330 |
gaaacaggacgtagtttcttagttcattttgtgtctgtg |
53462368 |
T |
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