View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3006_low_7 (Length: 448)

Name: NF3006_low_7
Description: NF3006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3006_low_7
NF3006_low_7
[»] chr1 (34 HSPs)
chr1 (1-439)||(20148572-20149022)
chr1 (222-289)||(22445653-22445720)
chr1 (222-289)||(22450887-22450954)
chr1 (222-289)||(18613100-18613167)
chr1 (342-392)||(9344583-9344633)
chr1 (217-289)||(9344461-9344533)
chr1 (222-289)||(21208156-21208223)
chr1 (222-289)||(23021396-23021463)
chr1 (342-392)||(7691707-7691757)
chr1 (342-392)||(17719674-17719724)
chr1 (342-392)||(22445553-22445603)
chr1 (342-392)||(22450787-22450837)
chr1 (342-392)||(25450515-25450565)
chr1 (222-289)||(21126706-21126773)
chr1 (222-277)||(21197033-21197088)
chr1 (342-392)||(3180136-3180186)
chr1 (342-392)||(4175836-4175886)
chr1 (342-392)||(5641944-5641994)
chr1 (342-392)||(5841739-5841789)
chr1 (342-392)||(7515809-7515859)
chr1 (342-392)||(12616559-12616609)
chr1 (342-392)||(12739063-12739113)
chr1 (342-392)||(19185740-19185790)
chr1 (358-392)||(21126606-21126640)
chr1 (342-392)||(21170193-21170243)
chr1 (342-392)||(21196921-21196971)
chr1 (358-392)||(21208056-21208090)
chr1 (342-392)||(21872202-21872252)
chr1 (342-392)||(22017107-22017157)
chr1 (342-392)||(23021511-23021561)
chr1 (342-392)||(35640276-35640326)
chr1 (342-392)||(38103620-38103670)
chr1 (342-392)||(47610172-47610222)
chr1 (342-392)||(51631428-51631478)
[»] chr8 (26 HSPs)
chr8 (222-289)||(17288552-17288619)
chr8 (222-289)||(22671469-22671536)
chr8 (222-289)||(19939779-19939845)
chr8 (342-392)||(17288452-17288502)
chr8 (342-392)||(19426918-19426968)
chr8 (342-392)||(19939895-19939945)
chr8 (227-289)||(20261207-20261269)
chr8 (227-289)||(21047837-21047899)
chr8 (344-392)||(19941030-19941078)
chr8 (222-289)||(22463796-22463863)
chr8 (342-392)||(250402-250452)
chr8 (342-392)||(813503-813553)
chr8 (342-392)||(3350864-3350914)
chr8 (342-392)||(6159660-6159710)
chr8 (342-392)||(9366288-9366338)
chr8 (342-392)||(13690799-13690849)
chr8 (342-392)||(15782940-15782990)
chr8 (342-392)||(19137274-19137324)
chr8 (342-392)||(19233372-19233422)
chr8 (342-392)||(26118903-26118953)
chr8 (342-392)||(29084985-29085035)
chr8 (342-392)||(30316954-30317004)
chr8 (342-392)||(32079925-32079975)
chr8 (342-392)||(36086516-36086566)
chr8 (342-392)||(36301520-36301570)
chr8 (342-392)||(44489708-44489758)
[»] chr2 (22 HSPs)
chr2 (222-289)||(24723057-24723124)
chr2 (222-289)||(28703559-28703626)
chr2 (215-285)||(21920801-21920871)
chr2 (222-289)||(22783975-22784042)
chr2 (342-392)||(28703459-28703509)
chr2 (342-392)||(4218444-4218494)
chr2 (342-392)||(9764977-9765027)
chr2 (342-392)||(9899787-9899837)
chr2 (342-392)||(10275535-10275585)
chr2 (342-392)||(11397386-11397436)
chr2 (342-392)||(21164161-21164211)
chr2 (342-392)||(22933706-22933756)
chr2 (342-392)||(24304293-24304343)
chr2 (342-392)||(24417240-24417290)
chr2 (342-392)||(24723174-24723224)
chr2 (342-392)||(27229987-27230037)
chr2 (342-392)||(34792431-34792481)
chr2 (342-392)||(35261552-35261602)
chr2 (342-392)||(35272177-35272227)
chr2 (342-392)||(39172308-39172358)
chr2 (342-392)||(40249157-40249207)
chr2 (342-392)||(43091227-43091277)
[»] scaffold0359 (1 HSPs)
scaffold0359 (222-289)||(8043-8110)
[»] chr3 (42 HSPs)
chr3 (222-289)||(24611018-24611085)
chr3 (223-289)||(18124055-18124121)
chr3 (342-392)||(7796815-7796865)
chr3 (342-392)||(12239812-12239862)
chr3 (342-392)||(18697207-18697257)
chr3 (342-391)||(14313562-14313611)
chr3 (222-291)||(16028700-16028769)
chr3 (222-289)||(5210433-5210500)
chr3 (234-289)||(19888771-19888826)
chr3 (342-392)||(506364-506414)
chr3 (342-392)||(4752312-4752362)
chr3 (342-392)||(5210550-5210600)
chr3 (342-392)||(5539215-5539265)
chr3 (342-392)||(5581827-5581877)
chr3 (342-392)||(5867890-5867940)
chr3 (342-392)||(6184160-6184210)
chr3 (342-392)||(6492540-6492590)
chr3 (342-392)||(8783256-8783306)
chr3 (342-392)||(9984082-9984132)
chr3 (342-392)||(10629142-10629192)
chr3 (342-392)||(11208288-11208338)
chr3 (342-392)||(11274579-11274629)
chr3 (342-392)||(12289174-12289224)
chr3 (342-392)||(13130263-13130313)
chr3 (342-392)||(13374862-13374912)
chr3 (342-392)||(13385456-13385506)
chr3 (342-392)||(14474214-14474264)
chr3 (342-392)||(16393242-16393292)
chr3 (342-392)||(16398214-16398264)
chr3 (342-392)||(17245492-17245542)
chr3 (342-392)||(19787015-19787065)
chr3 (342-392)||(19888671-19888721)
chr3 (342-392)||(20675391-20675441)
chr3 (342-392)||(23765887-23765937)
chr3 (342-392)||(24385712-24385762)
chr3 (342-392)||(24668463-24668513)
chr3 (342-392)||(28316432-28316482)
chr3 (342-392)||(29463400-29463450)
chr3 (342-392)||(37875054-37875104)
chr3 (342-392)||(37883572-37883622)
chr3 (342-392)||(38203245-38203295)
chr3 (342-392)||(39380677-39380727)
[»] scaffold0080 (2 HSPs)
scaffold0080 (222-289)||(56687-56754)
scaffold0080 (358-391)||(56820-56853)
[»] scaffold0022 (2 HSPs)
scaffold0022 (222-289)||(133241-133308)
scaffold0022 (222-289)||(156822-156889)
[»] chr7 (36 HSPs)
chr7 (222-289)||(13877823-13877890)
chr7 (222-289)||(16548406-16548473)
chr7 (222-289)||(16617189-16617256)
chr7 (222-286)||(13029351-13029415)
chr7 (222-289)||(14171343-14171411)
chr7 (222-289)||(16311979-16312046)
chr7 (345-392)||(16670457-16670504)
chr7 (345-392)||(17644825-17644872)
chr7 (342-392)||(14171461-14171511)
chr7 (342-392)||(15880100-15880150)
chr7 (344-392)||(16548306-16548354)
chr7 (344-392)||(16617308-16617356)
chr7 (342-392)||(175465-175515)
chr7 (342-392)||(459264-459314)
chr7 (342-392)||(1996131-1996181)
chr7 (342-392)||(2707891-2707941)
chr7 (342-392)||(4220583-4220633)
chr7 (342-392)||(6869508-6869558)
chr7 (342-392)||(8004344-8004394)
chr7 (342-392)||(8625920-8625970)
chr7 (342-392)||(9168156-9168206)
chr7 (342-392)||(9441838-9441888)
chr7 (342-392)||(11013762-11013812)
chr7 (243-289)||(13680047-13680093)
chr7 (342-392)||(17952392-17952442)
chr7 (342-392)||(20987632-20987682)
chr7 (342-392)||(22097716-22097766)
chr7 (342-392)||(24742676-24742726)
chr7 (342-392)||(26392372-26392422)
chr7 (342-392)||(26655614-26655664)
chr7 (342-392)||(40044382-40044432)
chr7 (342-392)||(42874423-42874473)
chr7 (342-391)||(13877940-13877989)
chr7 (228-289)||(16670557-16670618)
chr7 (228-289)||(17644925-17644986)
chr7 (237-289)||(16405405-16405457)
[»] chr6 (26 HSPs)
chr6 (222-289)||(19447761-19447828)
chr6 (342-392)||(20032125-20032175)
chr6 (342-392)||(26042142-26042192)
chr6 (342-392)||(27502251-27502301)
chr6 (222-289)||(26940085-26940152)
chr6 (342-392)||(3669991-3670041)
chr6 (342-392)||(6756023-6756073)
chr6 (342-392)||(6772823-6772873)
chr6 (342-392)||(9114697-9114747)
chr6 (342-392)||(12719040-12719090)
chr6 (342-392)||(12863478-12863528)
chr6 (342-392)||(16957555-16957605)
chr6 (342-392)||(25984024-25984074)
chr6 (342-392)||(26033967-26034017)
chr6 (342-392)||(26873349-26873399)
chr6 (342-392)||(26940202-26940252)
chr6 (342-392)||(27350292-27350342)
chr6 (342-392)||(27382684-27382734)
chr6 (342-392)||(27411032-27411082)
chr6 (342-392)||(27473068-27473118)
chr6 (342-392)||(28253772-28253822)
chr6 (342-392)||(28332521-28332571)
chr6 (342-392)||(32303250-32303300)
chr6 (342-392)||(32964150-32964200)
chr6 (342-392)||(34809366-34809416)
chr6 (217-289)||(6772923-6772995)
[»] scaffold0630 (2 HSPs)
scaffold0630 (222-280)||(4524-4582)
scaffold0630 (342-392)||(4399-4449)
[»] scaffold0231 (2 HSPs)
scaffold0231 (222-288)||(24481-24547)
scaffold0231 (358-392)||(24614-24648)
[»] chr5 (39 HSPs)
chr5 (342-392)||(20966398-20966448)
chr5 (222-289)||(21201386-21201453)
chr5 (222-289)||(26782106-26782173)
chr5 (342-392)||(19466289-19466339)
chr5 (342-392)||(20554132-20554182)
chr5 (342-392)||(20782362-20782412)
chr5 (342-392)||(24981304-24981354)
chr5 (344-392)||(31420982-31421030)
chr5 (342-393)||(23398228-23398279)
chr5 (342-392)||(1119796-1119846)
chr5 (342-392)||(6978123-6978173)
chr5 (342-392)||(9338271-9338321)
chr5 (342-392)||(14032359-14032409)
chr5 (342-392)||(14455506-14455556)
chr5 (342-392)||(14566547-14566597)
chr5 (342-392)||(15742286-15742336)
chr5 (342-392)||(17609379-17609429)
chr5 (342-392)||(17721235-17721285)
chr5 (342-392)||(22148833-22148883)
chr5 (342-392)||(22678433-22678483)
chr5 (342-392)||(23298594-23298644)
chr5 (342-392)||(23364413-23364463)
chr5 (342-392)||(23699097-23699147)
chr5 (342-392)||(24569405-24569455)
chr5 (342-392)||(24810230-24810280)
chr5 (342-392)||(26782223-26782273)
chr5 (342-392)||(27050731-27050781)
chr5 (342-392)||(27462479-27462529)
chr5 (342-392)||(30235920-30235970)
chr5 (342-392)||(31350851-31350901)
chr5 (342-392)||(31835797-31835847)
chr5 (342-392)||(35217820-35217870)
chr5 (342-392)||(36591011-36591061)
chr5 (342-392)||(36690015-36690065)
chr5 (342-392)||(37738461-37738511)
chr5 (342-392)||(39354813-39354863)
chr5 (342-392)||(39499381-39499431)
chr5 (342-392)||(40392675-40392725)
chr5 (342-392)||(42045097-42045147)
[»] scaffold0116 (2 HSPs)
scaffold0116 (222-290)||(26446-26514)
scaffold0116 (342-392)||(26347-26397)
[»] scaffold0453 (4 HSPs)
scaffold0453 (222-289)||(672-739)
scaffold0453 (222-289)||(5798-5865)
scaffold0453 (342-392)||(571-621)
scaffold0453 (342-392)||(5915-5965)
[»] scaffold0193 (2 HSPs)
scaffold0193 (222-289)||(15148-15215)
scaffold0193 (342-392)||(15265-15315)
[»] chr4 (25 HSPs)
chr4 (222-289)||(17245268-17245335)
chr4 (342-392)||(4989993-4990043)
chr4 (342-392)||(5020743-5020793)
chr4 (342-392)||(18064582-18064632)
chr4 (342-392)||(18754688-18754738)
chr4 (342-392)||(27174679-27174729)
chr4 (342-392)||(40456558-40456608)
chr4 (342-392)||(459170-459220)
chr4 (342-392)||(10299279-10299329)
chr4 (342-392)||(10742796-10742846)
chr4 (342-392)||(10956565-10956615)
chr4 (342-392)||(14906583-14906633)
chr4 (342-392)||(16264472-16264522)
chr4 (342-392)||(16315336-16315386)
chr4 (342-392)||(17245385-17245435)
chr4 (342-392)||(17926706-17926756)
chr4 (342-392)||(18132447-18132497)
chr4 (342-392)||(22005024-22005074)
chr4 (342-392)||(24648938-24648988)
chr4 (342-392)||(27665180-27665230)
chr4 (342-392)||(27817144-27817194)
chr4 (342-392)||(30928691-30928741)
chr4 (342-392)||(36026898-36026948)
chr4 (342-392)||(49516144-49516194)
chr4 (342-392)||(55747450-55747500)
[»] scaffold0299 (3 HSPs)
scaffold0299 (344-392)||(21069-21117)
scaffold0299 (347-392)||(15501-15546)
scaffold0299 (217-289)||(20945-21017)
[»] scaffold0290 (1 HSPs)
scaffold0290 (222-278)||(20031-20087)
[»] scaffold0083 (1 HSPs)
scaffold0083 (222-289)||(44074-44141)
[»] scaffold0035 (1 HSPs)
scaffold0035 (222-289)||(111991-112058)
[»] scaffold0011 (2 HSPs)
scaffold0011 (222-289)||(67739-67806)
scaffold0011 (358-392)||(67639-67673)
[»] scaffold1507 (1 HSPs)
scaffold1507 (342-392)||(1608-1658)
[»] scaffold0317 (1 HSPs)
scaffold0317 (243-289)||(1940-1986)
[»] scaffold0161 (3 HSPs)
scaffold0161 (342-392)||(12328-12378)
scaffold0161 (342-392)||(17001-17051)
scaffold0161 (342-392)||(19939-19989)
[»] scaffold0105 (1 HSPs)
scaffold0105 (342-392)||(39192-39242)
[»] scaffold0084 (1 HSPs)
scaffold0084 (342-392)||(47115-47165)
[»] scaffold0056 (1 HSPs)
scaffold0056 (358-392)||(27906-27940)


Alignment Details
Target: chr1 (Bit Score: 326; Significance: 0; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 1 - 439
Target Start/End: Complemental strand, 20149022 - 20148572
Alignment:
Q  1 tgaaggccacaactctcgtaaaagacatata--cggtatgaatttgacgttcattacttttatgtctctcaacaatgtttatgctttcacttcgaat--- 95  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  20149022 tgaaggccacaactctcgtaaaagacatatatacggtatgaatttgacgttcattacttttatgtctctcaacaatgtttatgctttcacttcgaataaa 20148923  T
Q  96 ----------tgttcacttttcttgtgtttttctacttgtacacaatttgaccttatctttcaatctatgataggattcgacttgccttatgtggtgcca 185  Q
              | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20148922 cagttgattgttttcacttttcttgtgtttttctacttgtacacaatttgaccttatctttcaatctatgataggattcgacttgccttatgtggtgcca 20148823  T
Q  186 aacatcacatgccctcacaattgccaatactcttctcacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagt 285  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20148822 aacatcacatgccctcacaattgccaatactcttctcacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaatgaagt 20148723  T
Q  286 caaagctctttcttaagttgttttt-aatttccttcaaatccacaagagnnnnnnnatgttgtttcaataaaccaacatatttttcgtttaaatctttca 384  Q
    ||||||    ||||||||||||||| ||||||||||| |||||||||||       ||||||||||||||||||||||||||||||||||||||||||||    
T  20148722 caaagc----tcttaagttgtttttcaatttccttcagatccacaagagtttttttatgttgtttcaataaaccaacatatttttcgtttaaatctttca 20148627  T
Q  385 actcattgtcaccgtagctactaaccccataactatgttttcttcatcttcatct 439  Q
    |||||||||||  ||| ||||||||||||||||||||||| ||||||||||||||    
T  20148626 actcattgtcagtgtaactactaaccccataactatgtttccttcatcttcatct 20148572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 22445720 - 22445653
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||||| ||| |||||||||||||  ||||||||| ||||||||||||||||||| ||||||||    
T  22445720 cacttttcttgtagcttctgacaaagatgcttgagtttttcttcataagttctacaaatgaagtcaaa 22445653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 22450954 - 22450887
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||||| ||| |||||||||||||  ||||||||| ||||||||||||||||||| ||||||||    
T  22450954 cacttttcttgtagcttctgacaaagatgcttgagtttttcttcataagttctacaaatgaagtcaaa 22450887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 289
Target Start/End: Original strand, 18613100 - 18613167
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||||| ||| |||| |||||||| |||||||||| ||||||||||| ||||||| ||||||||    
T  18613100 cacttttcttgtagcttctaacaaagatgtttgagtttttcttcataagttttacaaatgaagtcaaa 18613167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 9344583 - 9344633
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| |||||||||||||||||||||    
T  9344583 tgttgtttcattaaatcaacatatttttcttttaaatctttcaactcattg 9344633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 9344461 - 9344533
Alignment:
Q  217 cttctcacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||| ||||||||||  || |||||||||||||| ||||||||  || |||||||||||||||| ||||||||    
T  9344461 cttcacacttttcttgcagcttctgacaaagatacttgagtttatctacataagttctacaaatgaagtcaaa 9344533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 21208223 - 21208156
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||||| ||| ||||||||||| |  ||||||||| |||||||||||||||| || ||||||||    
T  21208223 cacttttcttgtagcttctgacaaaggtgcttgagtttttcttcataagttctacagatgaagtcaaa 21208156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 289
Target Start/End: Original strand, 23021396 - 23021463
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    ||||| |||| ||| |||||||||||||  ||||||||| ||||||||||| ||||||| ||||||||    
T  23021396 cacttctcttgtagcttctgacaaagatggttgagtttttcttcataagttttacaaatgaagtcaaa 23021463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 7691757 - 7691707
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| ||||||||| |||||||||||    
T  7691757 tgttgtttcattaaatcaacatatttttcttttaaatctgtcaactcattg 7691707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 17719674 - 17719724
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| || ||||||||||||||||||    
T  17719674 tgttgtttcattaaatcaacatatttttctttaaaatctttcaactcattg 17719724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 22445603 - 22445553
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| |||||||| ||||||||||||    
T  22445603 tgttgtttcattaaagcaacatatttttcttttaaatccttcaactcattg 22445553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 22450837 - 22450787
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| |||||||| ||||||||||||    
T  22450837 tgttgtttcattaaagcaacatatttttcttttaaatccttcaactcattg 22450787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 25450565 - 25450515
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| |||||||||||||||||||||    
T  25450565 tgttgtttcatcaaaacaacatatttttcttttaaatctttcaactcattg 25450515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 21126773 - 21126706
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||||| ||| || |||||||| |  ||||||||| |||||||||||||||| || ||||||||    
T  21126773 cacttttcttgtagcttttgacaaaggtgcttgagtttttcttcataagttctacagatgaagtcaaa 21126706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 21197088 - 21197033
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctaca 277  Q
    |||||||||| ||| |||||||| ||||  ||||||||| ||||||||||||||||    
T  21197088 cacttttcttgtagcttctgacatagatgcttgagtttttcttcataagttctaca 21197033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 3180136 - 3180186
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  3180136 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 3180186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 4175836 - 4175886
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  4175836 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 4175886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 5641994 - 5641944
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  5641994 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 5641944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 5841739 - 5841789
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  5841739 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 5841789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 7515809 - 7515859
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  7515809 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 7515859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 12616609 - 12616559
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  12616609 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 12616559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 12739063 - 12739113
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  12739063 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 12739113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 19185740 - 19185790
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  19185740 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 19185790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 392
Target Start/End: Complemental strand, 21126640 - 21126606
Alignment:
Q  358 caacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||||| |||||||||||||||||||||    
T  21126640 caacatatttttcttttaaatctttcaactcattg 21126606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 21170193 - 21170243
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| |||||||||  ||||||||||    
T  21170193 tgttgtttcattaaatcaacatatttttcttttaaatctgacaactcattg 21170243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 21196971 - 21196921
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| |||||||| |||| |||||||||||||||||||||    
T  21196971 tgttgtttcatcaaaacaacatatctttcttttaaatctttcaactcattg 21196921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 392
Target Start/End: Complemental strand, 21208090 - 21208056
Alignment:
Q  358 caacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||||| |||||||||||||||||||||    
T  21208090 caacatatttttcttttaaatctttcaactcattg 21208056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 21872202 - 21872252
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  21872202 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 21872252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 22017107 - 22017157
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| ||||||||  |||||||||||    
T  22017107 tgttgtttcattaaatcaacatatttttcttttaaatcagtcaactcattg 22017157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 23021511 - 23021561
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||| ||||||||  |||||||||||||||||||||    
T  23021511 tgttgtttcattaaagcaatatatttttgctttaaatctttcaactcattg 23021561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 35640326 - 35640276
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  35640326 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 35640276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 38103620 - 38103670
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  38103620 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 38103670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 47610222 - 47610172
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  47610222 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 47610172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 51631478 - 51631428
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  51631478 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 51631428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 3e-18; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 17288619 - 17288552
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||||| |||||||||||||||||  ||||||||| ||||||||||||||||||| ||||||||    
T  17288619 cacttttcttgtagtttctgacaaagatgcttgagtttttcttcataagttctacaaatgaagtcaaa 17288552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 289
Target Start/End: Original strand, 22671469 - 22671536
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||||| ||| ||||||||||| |  ||||||||| ||||||||||||||||||| ||||||||    
T  22671469 cacttttcttgtagcttctgacaaaggtggttgagtttttcttcataagttctacaaatgaagtcaaa 22671536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 289
Target Start/End: Original strand, 19939779 - 19939845
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||||| ||| |||||||||||||  ||||||||| |||||||| |||||||||| ||||||||    
T  19939779 cacttttcttgtagcttctgacaaagatgcttgagtttttcttcataa-ttctacaaatgaagtcaaa 19939845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 17288502 - 17288452
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| |||||||||||||||||||||    
T  17288502 tgttgtttcatcaaagcaacatatttttcttttaaatctttcaactcattg 17288452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 19426918 - 19426968
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| ||||||||| |||||||||||    
T  19426918 tgttgtttcattaaatcaacatatttttcttttaaatctgtcaactcattg 19426968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 19939895 - 19939945
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| |||||||||||||||||||||    
T  19939895 tgttgtttcatcaaagcaacatatttttcttttaaatctttcaactcattg 19939945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 289
Target Start/End: Complemental strand, 20261269 - 20261207
Alignment:
Q  227 ttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    ||||| ||| |||||||||||||  ||||||||| |||||||||||||||| || ||||||||    
T  20261269 ttcttgtagcttctgacaaagatgcttgagtttttcttcataagttctacagatgaagtcaaa 20261207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 289
Target Start/End: Complemental strand, 21047899 - 21047837
Alignment:
Q  227 ttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    ||||| ||| |||||||||||||  ||||||||| |||||||||||||||| || ||||||||    
T  21047899 ttcttgtagcttctgacaaagatgcttgagtttttcttcataagttctacagatgaagtcaaa 21047837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 392
Target Start/End: Original strand, 19941030 - 19941078
Alignment:
Q  344 ttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||| |||  ||||||||||||| |||||||||||||||||||||    
T  19941030 ttgtttcattaactcaacatatttttcttttaaatctttcaactcattg 19941078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 22463863 - 22463796
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||| | ||| |||||||||||||  ||||||||| ||||||||| | ||||||| ||||||||    
T  22463863 cacttttcatgtagcttctgacaaagatgcttgagtttttcttcataagatttacaaatgaagtcaaa 22463796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 250402 - 250452
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  250402 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 250452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 813503 - 813553
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  813503 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 813553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 3350914 - 3350864
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  3350914 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 3350864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 6159660 - 6159710
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  6159660 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 6159710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 9366288 - 9366338
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  9366288 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 9366338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 13690849 - 13690799
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  13690849 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 13690799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 15782990 - 15782940
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  15782990 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 15782940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 19137274 - 19137324
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  19137274 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 19137324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 19233372 - 19233422
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| ||||||||| | |||||||||    
T  19233372 tgttgtttcattaaatcaacatatttttcttttaaatctgttaactcattg 19233422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 26118903 - 26118953
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  26118903 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 26118953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 29084985 - 29085035
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  29084985 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 29085035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 30317004 - 30316954
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  30317004 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 30316954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 32079975 - 32079925
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  32079975 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 32079925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 36086516 - 36086566
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  36086516 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 36086566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 36301520 - 36301570
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  36301520 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 36301570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 44489708 - 44489758
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  44489708 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 44489758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 222 - 289
Target Start/End: Original strand, 24723057 - 24723124
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||||| ||| |||||||||||||| ||||||||| ||||||||||| ||||||||||||||||    
T  24723057 cacttttcttgtagcttctgacaaagatacttgagtttttcttcataagttttacaaataaagtcaaa 24723124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 28703626 - 28703559
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||| ||||||||    
T  28703626 cacttttcttttagcttctgacaaagatgcttgagtttttcttcataagttctacaaatgaagtcaaa 28703559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 21920871 - 21920801
Alignment:
Q  215 ctcttctcacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagt 285  Q
    |||||| ||||||||||||||||||||||||||||| |||||||| | ||| |||||| || |||| ||||    
T  21920871 ctcttcacacttttcttttagtttctgacaaagatacttgagtttactttcctaagttgtaaaaatgaagt 21920801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 22784042 - 22783975
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||||| ||| ||||||||||| |  ||||||||| |||||||||||||||| || ||||||||    
T  22784042 cacttttcttgtagcttctgacaaaggtgcttgagtttttcttcataagttctacagatgaagtcaaa 22783975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 28703509 - 28703459
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| |||||||||||||||||||||    
T  28703509 tgttgtttcatcaaagcaacatatttttcttttaaatctttcaactcattg 28703459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 4218444 - 4218494
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  4218444 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 4218494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 9765027 - 9764977
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  9765027 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 9764977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 9899837 - 9899787
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  9899837 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 9899787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 10275535 - 10275585
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  10275535 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 10275585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 11397436 - 11397386
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  11397436 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 11397386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 21164211 - 21164161
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| ||||||||  |||||||||||    
T  21164211 tgttgtttcattaaatcaacatatttttcttttaaatcagtcaactcattg 21164161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 22933756 - 22933706
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  22933756 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 22933706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 24304343 - 24304293
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| |||||||||| || ||||||||| |||||||||||    
T  24304343 tgttgtttcattaaatcaacatatttatcttttaaatctgtcaactcattg 24304293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 24417290 - 24417240
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| |||||||||  ||||||||||    
T  24417290 tgttgtttcattaaatcaacatatttttcttttaaatctgacaactcattg 24417240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 24723174 - 24723224
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| || | ||||||||||||| |||||||| ||||||||||||    
T  24723174 tgttgtttcattagatcaacatatttttcttttaaatccttcaactcattg 24723224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 27229987 - 27230037
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  27229987 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 27230037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 34792481 - 34792431
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  34792481 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 34792431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 35261552 - 35261602
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  35261552 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 35261602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 35272177 - 35272227
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  35272177 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 35272227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 39172358 - 39172308
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  39172358 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 39172308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 40249157 - 40249207
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  40249157 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 40249207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 43091227 - 43091277
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  43091227 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 43091277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 8110 - 8043
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||||| ||| |||||||||||||  ||||||||| ||||||||||||||||||| ||||||||    
T  8110 cacttttcttgtagcttctgacaaagatgcttgagtttttcttcataagttctacaaatgaagtcaaa 8043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 7e-16; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 24611085 - 24611018
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||||| |||||||||||||||||| ||||||||  ||||||||||| ||||||| ||||||||    
T  24611085 cacttttcttgtagtttctgacaaagatacttgagtttgtcttcataagttttacaaatgaagtcaaa 24611018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 18124121 - 18124055
Alignment:
Q  223 acttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    ||||||||| ||| |||||||||||||  ||||||||| ||||||||||||||||||| ||||||||    
T  18124121 acttttcttgtagcttctgacaaagatgcttgagtttttcttcataagttctacaaatgaagtcaaa 18124055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 7796865 - 7796815
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| ||||||||| |||||||||||    
T  7796865 tgttgtttcattaaatcaacatatttttcttttaaatctgtcaactcattg 7796815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 12239862 - 12239812
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| ||||||||| |||||||||||    
T  12239862 tgttgtttcattaaatcaacatatttttcttttaaatctgtcaactcattg 12239812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 18697257 - 18697207
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| |||||||||| || |||||||||||||||||||||    
T  18697257 tgttgtttcattaaatcaacatatttatcttttaaatctttcaactcattg 18697207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 391
Target Start/End: Complemental strand, 14313611 - 14313562
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcatt 391  Q
    |||||||||| |||| ||||||||||||| ||||||||| ||||||||||    
T  14313611 tgttgtttcattaaatcaacatatttttcttttaaatctgtcaactcatt 14313562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 16028700 - 16028769
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaagc 291  Q
    |||||||||| ||| |||||||||||| | ||||||||  ||||||||||| ||||||| ||||| ||||    
T  16028700 cacttttcttgtagcttctgacaaagaaacttgagtttctcttcataagttttacaaatgaagtctaagc 16028769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 289
Target Start/End: Original strand, 5210433 - 5210500
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||||| ||| ||||||||||| |  ||||||||| ||||| |||||||||| || ||||||||    
T  5210433 cacttttcttgtagcttctgacaaaggtgcttgagtttttcttcacaagttctacagatgaagtcaaa 5210500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 289
Target Start/End: Complemental strand, 19888826 - 19888771
Alignment:
Q  234 agtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||| |||||||||  ||||| ||| ||||||||||||||||||| ||||||||    
T  19888826 agtttcagacaaagatgcttgagattttcttcataagttctacaaatgaagtcaaa 19888771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 506414 - 506364
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  506414 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 506364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 4752312 - 4752362
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  4752312 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 4752362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 5210550 - 5210600
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||| |||||||||||||||    
T  5210550 tgttgtttcatcaaagcaacatatttttcttttaattctttcaactcattg 5210600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 5539265 - 5539215
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  5539265 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 5539215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 5581877 - 5581827
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  5581877 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 5581827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 5867940 - 5867890
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  5867940 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 5867890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 6184210 - 6184160
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  6184210 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 6184160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 6492590 - 6492540
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| ||||||||| | |||||||||    
T  6492590 tgttgtttcattaaatcaacatatttttcttttaaatctgttaactcattg 6492540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 8783256 - 8783306
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  8783256 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 8783306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 9984132 - 9984082
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| |||| |||||||| ||||||||| |||||||||||    
T  9984132 tgttgtttcattaaatcaacgtatttttcttttaaatctgtcaactcattg 9984082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 10629192 - 10629142
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| |||||||||||||  |||||||| |||||||||||    
T  10629192 tgttgtttcattaaatcaacatatttttctattaaatctgtcaactcattg 10629142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 11208338 - 11208288
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| |||||||||  ||||||||||    
T  11208338 tgttgtttcattaaatcaacatatttttcttttaaatctgacaactcattg 11208288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 11274629 - 11274579
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  11274629 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 11274579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 12289224 - 12289174
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  12289224 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 12289174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 13130263 - 13130313
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  13130263 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 13130313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 13374912 - 13374862
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  13374912 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 13374862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 13385506 - 13385456
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  13385506 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 13385456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 14474214 - 14474264
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  14474214 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 14474264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 16393292 - 16393242
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  16393292 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 16393242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 16398264 - 16398214
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| | ||||||||||| ||||||||| |||||||||||    
T  16398264 tgttgtttcattaaatcgacatatttttcttttaaatctgtcaactcattg 16398214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 17245542 - 17245492
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| |||||||| |||| |||||||||||||||||||||    
T  17245542 tgttgtttcatcaaaacaacatatctttcttttaaatctttcaactcattg 17245492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 19787015 - 19787065
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  19787015 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 19787065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 19888721 - 19888671
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| |||||||| |||| |||||||||||||||||||||    
T  19888721 tgttgtttcatcaaaacaacatatctttcttttaaatctttcaactcattg 19888671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 20675441 - 20675391
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  20675441 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 20675391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 23765887 - 23765937
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  23765887 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 23765937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 24385762 - 24385712
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  24385762 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 24385712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 24668463 - 24668513
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  24668463 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 24668513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 28316482 - 28316432
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  28316482 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 28316432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 29463450 - 29463400
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  29463450 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 29463400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 37875054 - 37875104
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  37875054 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 37875104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 37883572 - 37883622
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  37883572 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 37883622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 38203245 - 38203295
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  38203245 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 38203295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 39380677 - 39380727
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  39380677 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 39380727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 289
Target Start/End: Original strand, 56687 - 56754
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||||| ||| ||||||||||| | |||||||||| |||||||||||||||| || ||||||||    
T  56687 cacttttcttgtagcttctgacaaaggtgtttgagtttttcttcataagttctacagatgaagtcaaa 56754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 391
Target Start/End: Original strand, 56820 - 56853
Alignment:
Q  358 caacatatttttcgtttaaatctttcaactcatt 391  Q
    ||||||||||||| ||||||||||||||||||||    
T  56820 caacatatttttcttttaaatctttcaactcatt 56853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 289
Target Start/End: Original strand, 133241 - 133308
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||||| ||| |||||| ||||||  ||||||||| ||||||||||||||||||| ||||||||    
T  133241 cacttttcttgtagcttctgagaaagatgcttgagtttttcttcataagttctacaaatgaagtcaaa 133308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 289
Target Start/End: Original strand, 156822 - 156889
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||||| ||| |||||||| ||||  ||||||||| ||||||||||| ||||||| ||||||||    
T  156822 cacttttcttgtagcttctgacagagatgcttgagtttttcttcataagttgtacaaatgaagtcaaa 156889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 289
Target Start/End: Original strand, 13877823 - 13877890
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||||||| ||||||||    
T  13877823 cacttttcttgtagcttctgacaaagatgcttgagtttttcttcataagttatacaaatgaagtcaaa 13877890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 16548473 - 16548406
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||||| ||| |||||||||||||  |||||||||  |||||||||||||||||| ||||||||    
T  16548473 cacttttcttgtagcttctgacaaagatgcttgagtttttattcataagttctacaaatgaagtcaaa 16548406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 289
Target Start/End: Original strand, 16617189 - 16617256
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||||| ||| |||||||||||||  |||||||||  |||||||||||||||||| ||||||||    
T  16617189 cacttttcttgtagcttctgacaaagatgcttgagtttttattcataagttctacaaatgaagtcaaa 16617256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 286
Target Start/End: Complemental strand, 13029415 - 13029351
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtc 286  Q
    |||||||||| ||| |||||||||||||  ||||||||| |||||||||||||||| | ||||||    
T  13029415 cacttttcttgtagcttctgacaaagatgcttgagtttttcttcataagttctacagacaaagtc 13029351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 289
Target Start/End: Original strand, 14171343 - 14171411
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttc-cttcataagttctacaaataaagtcaaa 289  Q
    |||||||||| ||| |||||||||||||  |||||||||  ||||||||||||||||||| ||||||||    
T  14171343 cacttttcttgtagcttctgacaaagatgcttgagttttttcttcataagttctacaaatgaagtcaaa 14171411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 16312046 - 16311979
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    ||||| |||| ||| |||||||||||||  ||||||||| |||||||||||||||| || ||||||||    
T  16312046 cacttctcttgtagcttctgacaaagatgcttgagtttttcttcataagttctacagatgaagtcaaa 16311979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 392
Target Start/End: Complemental strand, 16670504 - 16670457
Alignment:
Q  345 tgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||| |||| ||||||||||||| |||||||||||||||||||||    
T  16670504 tgtttcattaaatcaacatatttttcttttaaatctttcaactcattg 16670457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 392
Target Start/End: Complemental strand, 17644872 - 17644825
Alignment:
Q  345 tgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||| |||| ||||||||||||| |||||||||||||||||||||    
T  17644872 tgtttcattaaatcaacatatttttcttttaaatctttcaactcattg 17644825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 14171461 - 14171511
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| |||||||||||||||| ||||    
T  14171461 tgttgtttcattaaagcaacatatttttcttttaaatctttcaacttattg 14171511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 15880150 - 15880100
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| ||||||||| |||||||||||    
T  15880150 tgttgtttcattaaatcaacatatttttcttttaaatctgtcaactcattg 15880100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 392
Target Start/End: Complemental strand, 16548354 - 16548306
Alignment:
Q  344 ttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||  ||| ||||||||||||| |||||||||||||||||||||    
T  16548354 ttgtttcatcaaagcaacatatttttcttttaaatctttcaactcattg 16548306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 392
Target Start/End: Original strand, 16617308 - 16617356
Alignment:
Q  344 ttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||  ||| ||||||||||||| |||||||||||||||||||||    
T  16617308 ttgtttcatcaaagcaacatatttttcttttaaatctttcaactcattg 16617356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 175465 - 175515
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  175465 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 175515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 459314 - 459264
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  459314 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 459264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 1996131 - 1996181
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  1996131 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 1996181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 2707941 - 2707891
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  2707941 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 2707891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 4220583 - 4220633
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  4220583 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 4220633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 6869558 - 6869508
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  6869558 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 6869508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 8004394 - 8004344
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  8004394 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 8004344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 8625920 - 8625970
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  8625920 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 8625970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 9168156 - 9168206
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| |||||||||  ||||||||||    
T  9168156 tgttgtttcattaaatcaacatatttttcttttaaatctgacaactcattg 9168206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 9441838 - 9441888
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  9441838 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 9441888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 11013762 - 11013812
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  11013762 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 11013812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 13680047 - 13680093
Alignment:
Q  243 caaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||  ||||||||| ||||||||||||||||||| ||||||||    
T  13680047 caaagatgcttgagtttttcttcataagttctacaaatgaagtcaaa 13680093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 17952442 - 17952392
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  17952442 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 17952392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 20987632 - 20987682
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  20987632 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 20987682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 22097716 - 22097766
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  22097716 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 22097766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 24742676 - 24742726
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  24742676 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 24742726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 26392422 - 26392372
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  26392422 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 26392372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 26655664 - 26655614
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  26655664 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 26655614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 40044432 - 40044382
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  40044432 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 40044382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 42874423 - 42874473
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  42874423 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 42874473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 391
Target Start/End: Original strand, 13877940 - 13877989
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcatt 391  Q
    ||||||||||  ||| |||||||| |||| ||||||||||||||||||||    
T  13877940 tgttgtttcatcaaaacaacatatctttcttttaaatctttcaactcatt 13877989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 289
Target Start/End: Complemental strand, 16670618 - 16670557
Alignment:
Q  228 tcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||| ||| |||||||||||||| |||||||||  |||||||||| |||| || ||||||||    
T  16670618 tcttgtagcttctgacaaagatacttgagtttttattcataagttttacagatgaagtcaaa 16670557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 289
Target Start/End: Complemental strand, 17644986 - 17644925
Alignment:
Q  228 tcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||| ||| |||||||||||||| |||||||||  |||||||||| |||| || ||||||||    
T  17644986 tcttgtagcttctgacaaagatacttgagtttttattcataagttttacagatgaagtcaaa 17644925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 16405405 - 16405457
Alignment:
Q  237 ttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||||||| | ||||||||  ||||||||||| ||||||| ||||||||    
T  16405405 ttctgacaaagaaagttgagtttgtcttcataagttttacaaatgaagtcaaa 16405457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 289
Target Start/End: Original strand, 19447761 - 19447828
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||||| ||| |||||||||||||  ||||||||| |||||||||||||||| || ||||||||    
T  19447761 cacttttcttgtagcttctgacaaagatggttgagtttttcttcataagttctacagatgaagtcaaa 19447828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 20032175 - 20032125
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| ||||||||| |||||||||||    
T  20032175 tgttgtttcattaaatcaacatatttttcttttaaatctgtcaactcattg 20032125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 26042142 - 26042192
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| ||||||||| |||||||||||    
T  26042142 tgttgtttcattaaatcaacatatttttcttttaaatctgtcaactcattg 26042192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 27502251 - 27502301
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| ||||||||| |||||||||||    
T  27502251 tgttgtttcattaaatcaacatatttttcttttaaatctgtcaactcattg 27502301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 289
Target Start/End: Original strand, 26940085 - 26940152
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||||| ||| |||||| ||||||| ||||||||| ||||||||||| || |||| || |||||    
T  26940085 cacttttcttgtagcttctgaaaaagatacttgagtttttcttcataagttttagaaatgaattcaaa 26940152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 3669991 - 3670041
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  3669991 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 3670041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 6756073 - 6756023
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| |||||||||| || ||||||||||||| |||||||    
T  6756073 tgttgtttcattaaatcaacatatttatcttttaaatctttcagctcattg 6756023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 6772873 - 6772823
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| ||||  ||||||||| || |||||||||||||||||||||    
T  6772873 tgttgtttcattaaattaacatatttatcttttaaatctttcaactcattg 6772823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 9114747 - 9114697
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  9114747 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 9114697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 12719090 - 12719040
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  12719090 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 12719040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 12863478 - 12863528
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  12863478 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 12863528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 16957555 - 16957605
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  16957555 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 16957605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 25984024 - 25984074
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  25984024 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 25984074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 26033967 - 26034017
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  26033967 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 26034017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 26873349 - 26873399
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  26873349 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 26873399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 26940202 - 26940252
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| || | ||||||||||||| ||||| |||||||||||||||    
T  26940202 tgttgtttcattagatcaacatatttttcttttaattctttcaactcattg 26940252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 27350292 - 27350342
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  27350292 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 27350342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 27382684 - 27382734
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||| ||||| |||| ||||||||||||| ||||||||| |||||||||||    
T  27382684 tgttctttcattaaatcaacatatttttcttttaaatctgtcaactcattg 27382734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 27411032 - 27411082
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  27411032 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 27411082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 27473068 - 27473118
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||| ||||| |||| ||||||||||||| ||||||||| |||||||||||    
T  27473068 tgttctttcattaaatcaacatatttttcttttaaatctgtcaactcattg 27473118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 28253822 - 28253772
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  28253822 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 28253772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 28332571 - 28332521
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  28332571 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 28332521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 32303300 - 32303250
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  32303300 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 32303250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 32964200 - 32964150
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  32964200 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 32964150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 34809416 - 34809366
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  34809416 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 34809366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 6772995 - 6772923
Alignment:
Q  217 cttctcacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||| ||||||||||  || |||||||||||| | ||||||||  ||||||||||| || |||| ||||||||    
T  6772995 cttcacacttttcttgaagcttctgacaaagaaacttgagtttgtcttcataagttttataaatgaagtcaaa 6772923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 4582 - 4524
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaat 280  Q
    |||||||||| ||| |||||||||||||  ||||||||| |||||||||||||||||||    
T  4582 cacttttcttgtagcttctgacaaagatgcttgagtttttcttcataagttctacaaat 4524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 4449 - 4399
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| |||||||| |||| |||||||||||||||||||||    
T  4449 tgttgtttcatcaaaacaacatatctttcttttaaatctttcaactcattg 4399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 222 - 288
Target Start/End: Original strand, 24481 - 24547
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaa 288  Q
    |||||||||| ||| |||||||||||||  ||||||||| |||||||||||||||| || |||||||    
T  24481 cacttttcttgtagcttctgacaaagatgcttgagtttttcttcataagttctacagatgaagtcaa 24547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 392
Target Start/End: Original strand, 24614 - 24648
Alignment:
Q  358 caacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||||| |||||||||||||||||||||    
T  24614 caacatatttttcttttaaatctttcaactcattg 24648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 20966398 - 20966448
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||| |||||| ||||||||||||| |||||||||||||||||||||    
T  20966398 tgttgttttaataaatcaacatatttttcttttaaatctttcaactcattg 20966448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 21201453 - 21201386
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||||| ||| |||||||||||||  ||||||||| ||| |||||||||||| || ||||||||    
T  21201453 cacttttcttgtagcttctgacaaagatgcttgagtttttcttaataagttctacagatgaagtcaaa 21201386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 289
Target Start/End: Original strand, 26782106 - 26782173
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||||| ||| |||| ||||||||  ||||||||| |||||||||||||||| || ||||||||    
T  26782106 cacttttcttgtagcttctaacaaagatgcttgagtttttcttcataagttctacagatgaagtcaaa 26782173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 19466339 - 19466289
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| ||||||||| |||||||||||    
T  19466339 tgttgtttcattaaatcaacatatttttcttttaaatctgtcaactcattg 19466289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 20554182 - 20554132
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| ||||||||| |||||||||||    
T  20554182 tgttgtttcattaaatcaacatatttttcttttaaatctgtcaactcattg 20554132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 20782412 - 20782362
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| ||||||||| |||||||||||    
T  20782412 tgttgtttcattaaatcaacatatttttcttttaaatctgtcaactcattg 20782362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 24981304 - 24981354
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| ||||||||| |||||||||||    
T  24981304 tgttgtttcattaaatcaacatatttttcttttaaatctgtcaactcattg 24981354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 392
Target Start/End: Complemental strand, 31421030 - 31420982
Alignment:
Q  344 ttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||| |||| ||||||||||||| ||||||||| |||||||||||    
T  31421030 ttgtttcattaaatcaacatatttttcttttaaatctgtcaactcattg 31420982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 393
Target Start/End: Complemental strand, 23398279 - 23398228
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattgt 393  Q
    |||||||||| |||| ||||||||||||| |||||||||  |||||||||||    
T  23398279 tgttgtttcattaaatcaacatatttttcttttaaatctgacaactcattgt 23398228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 1119796 - 1119846
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  1119796 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 1119846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 6978173 - 6978123
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  6978173 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 6978123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 9338321 - 9338271
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  9338321 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 9338271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 14032409 - 14032359
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  14032409 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 14032359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 14455506 - 14455556
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  14455506 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 14455556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 14566547 - 14566597
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  14566547 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 14566597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 15742336 - 15742286
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  15742336 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 15742286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 17609429 - 17609379
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  17609429 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 17609379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 17721285 - 17721235
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  17721285 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 17721235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 22148883 - 22148833
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  22148883 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 22148833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 22678483 - 22678433
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  22678483 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 22678433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 23298644 - 23298594
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  23298644 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 23298594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 23364463 - 23364413
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  23364463 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 23364413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 23699147 - 23699097
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  23699147 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 23699097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 24569455 - 24569405
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  24569455 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 24569405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 24810280 - 24810230
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  24810280 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 24810230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 26782223 - 26782273
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| |||||||| |||| |||||||||||||||||||||    
T  26782223 tgttgtttcatcaaaacaacatatctttcttttaaatctttcaactcattg 26782273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 27050731 - 27050781
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  27050731 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 27050781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 27462529 - 27462479
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  27462529 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 27462479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 30235920 - 30235970
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  30235920 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 30235970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 31350901 - 31350851
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  31350901 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 31350851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 31835847 - 31835797
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  31835847 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 31835797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 35217870 - 35217820
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  35217870 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 35217820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 36591011 - 36591061
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  36591011 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 36591061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 36690065 - 36690015
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  36690065 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 36690015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 37738461 - 37738511
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  37738461 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 37738511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 39354863 - 39354813
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  39354863 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 39354813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 39499381 - 39499431
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  39499381 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 39499431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 40392725 - 40392675
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  40392725 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 40392675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 42045147 - 42045097
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  42045147 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 42045097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 290
Target Start/End: Complemental strand, 26514 - 26446
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaag 290  Q
    |||||||||| ||| |||||||||||||| ||||| ||  ||||||||||| ||||||| |||||||||    
T  26514 cacttttcttgtagcttctgacaaagatacttgagcttctcttcataagttttacaaatgaagtcaaag 26446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 26397 - 26347
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||  ||||||||||||| ||||||| |||||||||||||    
T  26397 tgttgtttcattaactcaacatatttttcttttaaatatttcaactcattg 26347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 36; Significance: 0.00000000004; HSPs: 4)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 739 - 672
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||||| ||| |||| ||||||||  ||||||||| |||||||||||||||| || ||||||||    
T  739 cacttttcttgtagcttctaacaaagatgcttgagtttttcttcataagttctacagatgaagtcaaa 672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 289
Target Start/End: Original strand, 5798 - 5865
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||||| ||| |||| ||||||||  || |||||| ||||||||||||||||||| ||||||||    
T  5798 cacttttcttgtagcttctaacaaagatgcttaagtttttcttcataagttctacaaatgaagtcaaa 5865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 621 - 571
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| |||||||| |||| |||||||||||||| ||||||    
T  621 tgttgtttcattaaaacaacatatatttcttttaaatctttcaattcattg 571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 5915 - 5965
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||| |||||||||||||    
T  5915 tgttgtttcatcaaagcaacatatttttcttttaaatatttcaactcattg 5965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 289
Target Start/End: Original strand, 15148 - 15215
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||||| ||| || ||||||||||  || |||||| ||||||||||||||||||| ||||||||    
T  15148 cacttttcttgtagcttatgacaaagatgctttagtttttcttcataagttctacaaatgaagtcaaa 15215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 15265 - 15315
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| |||||||| |||| |||||||||||||||||||||    
T  15265 tgttgtttcatgaaaacaacatatctttcttttaaatctttcaactcattg 15315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000004; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 289
Target Start/End: Original strand, 17245268 - 17245335
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||||| ||| |||||||||||||  ||||||||| |||||||||||| | |||| ||||||||    
T  17245268 cacttttcttgtagcttctgacaaagatgcttgagtttttcttcataagttcgataaatgaagtcaaa 17245335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 4990043 - 4989993
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| ||||||||| |||||||||||    
T  4990043 tgttgtttcattaaatcaacatatttttcttttaaatctgtcaactcattg 4989993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 5020743 - 5020793
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| ||||||||| |||||||||||    
T  5020743 tgttgtttcattaaatcaacatatttttcttttaaatctgtcaactcattg 5020793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 18064582 - 18064632
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| ||||||||| |||||||||||    
T  18064582 tgttgtttcattaaatcaacatatttttcttttaaatctgtcaactcattg 18064632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 18754738 - 18754688
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| ||||||||| |||||||||||    
T  18754738 tgttgtttcattaaatcaacatatttttcttttaaatctgtcaactcattg 18754688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 27174679 - 27174729
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| ||||||||| |||||||||||    
T  27174679 tgttgtttcattaaatcaacatatttttcttttaaatctgtcaactcattg 27174729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 40456608 - 40456558
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| ||||||||| |||||||||||    
T  40456608 tgttgtttcattaaatcaacatatttttcttttaaatctatcaactcattg 40456558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 459170 - 459220
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  459170 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 459220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 10299279 - 10299329
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| |||||||||  ||||||||||    
T  10299279 tgttgtttcattaaatcaacatatttttcttttaaatctgacaactcattg 10299329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 10742846 - 10742796
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  10742846 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 10742796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 10956615 - 10956565
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  10956615 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 10956565  T

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Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 14906633 - 14906583
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| |||||||| |||| |||||||||||||||||||||    
T  14906633 tgttgtttcatcaaaacaacatatctttcttttaaatctttcaactcattg 14906583  T

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Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 16264472 - 16264522
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  16264472 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 16264522  T

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Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 16315336 - 16315386
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| |||||||||  ||||||||||    
T  16315336 tgttgtttcattaaatcaacatatttttcttttaaatctgacaactcattg 16315386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 17245385 - 17245435
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||| | |||||||||||||||||||||    
T  17245385 tgttgtttcatcaaagcaacatattttccttttaaatctttcaactcattg 17245435  T

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Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 17926706 - 17926756
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  17926706 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 17926756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 18132497 - 18132447
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  18132497 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 18132447  T

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Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 22005024 - 22005074
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  22005024 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 22005074  T

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Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 24648938 - 24648988
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  24648938 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 24648988  T

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Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 27665180 - 27665230
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  27665180 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 27665230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 27817194 - 27817144
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  27817194 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 27817144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 30928741 - 30928691
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  30928741 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 30928691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 36026898 - 36026948
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  36026898 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 36026948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 49516144 - 49516194
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  49516144 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 49516194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 55747500 - 55747450
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  55747500 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 55747450  T

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Target: scaffold0299 (Bit Score: 33; Significance: 0.000000003; HSPs: 3)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 392
Target Start/End: Original strand, 21069 - 21117
Alignment:
Q  344 ttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||| |||| |||||||||| || |||||||||||||||||||||    
T  21069 ttgtttcattaaatcaacatatttatcttttaaatctttcaactcattg 21117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 392
Target Start/End: Original strand, 15501 - 15546
Alignment:
Q  347 tttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||| |||| |||||||||| || |||||||||||||||||||||    
T  15501 tttcattaaatcaacatatttatcttttaaatctttcaactcattg 15546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 20945 - 21017
Alignment:
Q  217 cttctcacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||| ||||||||||  || || ||||||||| |  |||||||  ||||||||||| ||||||||||||||||    
T  20945 cttcacacttttcttaaagcttatgacaaagaaacctgagtttgtcttcataagttttacaaataaagtcaaa 21017  T

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Target: scaffold0290 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 20087 - 20031
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaa 278  Q
    |||||||||| ||| |||| ||||||||  ||||||||| |||||||||||||||||    
T  20087 cacttttcttgtagcttcttacaaagatgcttgagtttttcttcataagttctacaa 20031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 44141 - 44074
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    ||||| |||| ||| |||||||||||||  ||||||||| ||||||| |||||||| || ||||||||    
T  44141 cacttctcttgtagcttctgacaaagatggttgagtttttcttcatatgttctacagatgaagtcaaa 44074  T

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Target: scaffold0035 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 112058 - 111991
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    ||||| |||| ||| ||||||||||| |  ||||||||| |||||||||||||||| || ||||||||    
T  112058 cacttctcttgtagcttctgacaaaggtgcttgagtttttcttcataagttctacagattaagtcaaa 111991  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 67806 - 67739
Alignment:
Q  222 cacttttcttttagtttctgacaaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    ||||| |||| ||| ||||||||||| |  ||||||||| |||||||||||||||| || ||||||||    
T  67806 cacttctcttgtagcttctgacaaaggtgcttgagtttttcttcataagttctacagatgaagtcaaa 67739  T

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Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 392
Target Start/End: Complemental strand, 67673 - 67639
Alignment:
Q  358 caacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||||| |||||||||||||||||||||    
T  67673 caacatatttttcttttaaatctttcaactcattg 67639  T

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Target: scaffold1507 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1507
Description:

Target: scaffold1507; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 1658 - 1608
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||| ||||||||||||| |||||||| | ||||||||||    
T  1658 tgttgtttcattaaatcaacatatttttcttttaaatcatccaactcattg 1608  T

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Target: scaffold0317 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 1940 - 1986
Alignment:
Q  243 caaagatatttgagttttccttcataagttctacaaataaagtcaaa 289  Q
    |||||||  ||||||||| ||||||||||||||||||| ||||||||    
T  1940 caaagatgcttgagtttttcttcataagttctacaaatgaagtcaaa 1986  T

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Target: scaffold0161 (Bit Score: 31; Significance: 0.00000004; HSPs: 3)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 12378 - 12328
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||  ||||||||||||| || ||||||||||||||||||    
T  12378 tgttgtttcattaactcaacatatttttctttgaaatctttcaactcattg 12328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 17051 - 17001
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||  ||||||||||||| || ||||||||||||||||||    
T  17051 tgttgtttcattaactcaacatatttttctttgaaatctttcaactcattg 17001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 19989 - 19939
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    |||||||||| |||  ||||||||||||| || ||||||||||||||||||    
T  19989 tgttgtttcattaactcaacatatttttctttgaaatctttcaactcattg 19939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 39242 - 39192
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| ||||||||||||| ||||||||| |||||||||||    
T  39242 tgttgtttcatcaaatcaacatatttttcttttaaatctgtcaactcattg 39192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 47115 - 47165
Alignment:
Q  342 tgttgtttcaataaaccaacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||  ||| |||||||| |||| |||||||||||||||||||||    
T  47115 tgttgtttcatcaaaacaacatatctttcttttaaatctttcaactcattg 47165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 392
Target Start/End: Complemental strand, 27940 - 27906
Alignment:
Q  358 caacatatttttcgtttaaatctttcaactcattg 392  Q
    ||||||||||||| |||||||||||||||||||||    
T  27940 caacatatttttcttttaaatctttcaactcattg 27906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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