View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3010-Insertion-5 (Length: 739)
Name: NF3010-Insertion-5
Description: NF3010
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3010-Insertion-5 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 620; Significance: 0; HSPs: 46)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 620; E-Value: 0
Query Start/End: Original strand, 7 - 719
Target Start/End: Original strand, 26192329 - 26193041
Alignment:
| Q |
7 |
aattcgagcatggactctagagaattggcacagatttttgtctcccctgtaacggtttccccttcgcactcttcaagtgctcctctcatggatttggctt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26192329 |
aattcgagcatggactctagagaattggcacagatttttgtctcccctgtaacggtttccccttcgcactcttcaagtgctcctctcatggatttggctt |
26192428 |
T |
 |
| Q |
107 |
gaggagatgcttcagggattgaaaagagttgaagaatacttgggagttgtgacatcgagaaaggaatggagtcggcctcnnnnnnngagaggtaaggaga |
206 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
26192429 |
gaggagattcttcagggattgaaaagagttgaagaatacttgggagttgtgacatcgagaaaggaatggagtcggcctctttttttgagaggtatggaga |
26192528 |
T |
 |
| Q |
207 |
aacttcttggaccggaaattggagggtcattacatttccaatgtgaagatcatccaaactgaaatatcctgtcttgaaagcttctgtatgatccaaatta |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
26192529 |
aacttcttggaccggaaattggagggtcattacatttccaacgtgaagatcatcaaaactgaaatatcctgtcttgaaagcttctgtatgatccaagtta |
26192628 |
T |
 |
| Q |
307 |
ggaattgggagatcttctacggagttggtagatgggaggccttttggatcaatgacatatttgtacccagtaatgtaatttggttgcttggtttcatgtt |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
26192629 |
ggaattgggagatcttctacggagttggtagatgggaggccttttggatcaatgacatatttgtacccagaaatgtaatttggttgcttggtttcatgtt |
26192728 |
T |
 |
| Q |
407 |
taccatattgagttatgtaaggaccattggattcatggttatgggtcctatacccagtaatgtaattttgttgcttggtttcatgtttaccatattgagt |
506 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
26192729 |
taccatattgagttatgtaaggaccattggattcatggttatgggtcatatacccggtaatgtaatttagttgcttggtttcatgtttaccatattgagt |
26192828 |
T |
 |
| Q |
507 |
tatgtaaggaccattggattcatggttatgggtcctatacccggtaatgtaattttgttgcttggtttcatgtttaccatattgagttatgtaaggacca |
606 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26192829 |
tatgtaaggaccattggattcatggttatgggtcctatacccggtaatgtaattttgttgcttggtttcatgtttaccatattgagttatgtaaggacca |
26192928 |
T |
 |
| Q |
607 |
ttggattcatggttatggatcttatagccactaatgtaatttggttgtttggcttcatgtttaccatatccagttatgtaaggttcatttgattctggtt |
706 |
Q |
| |
|
|||||||||||||||||| || |||| ||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||| |
|
|
| T |
26192929 |
ttggattcatggttatgggtcatatacccagtaatgtaatttagttaattggcttcatgtttaccatatccagttatgtaaggttaatttgattctagtt |
26193028 |
T |
 |
| Q |
707 |
gtttggcttcatg |
719 |
Q |
| |
|
||||||||||||| |
|
|
| T |
26193029 |
gtttggcttcatg |
26193041 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 460 - 739
Target Start/End: Original strand, 26176474 - 26176752
Alignment:
| Q |
460 |
ccagtaatgtaattttgttgcttggtttcatgtttaccatattgagttatgtaaggaccattggattcatggttatgggtcctatacccggtaatgtaat |
559 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||| ||||| ||||||||||| || ||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
26176474 |
ccagtaatgtaatttggttgcttgccttcatgtttatcatatgaagttatgtaagctccgttggatttatggttatgggtcctatacccggtaatgtaat |
26176573 |
T |
 |
| Q |
560 |
tttgttgcttggtttcatgtttaccatattgagttatgtaaggaccattggattcatggttatggatcttatagccactaatgtaatttggttgtttggc |
659 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||| |||||||||| |
|
|
| T |
26176574 |
ttggttgcttggtttcatgtttaccatattgagttatgtaaggaccattggattcatggttatgggtcttatacccgataatgtaattttgttgtttggc |
26176673 |
T |
 |
| Q |
660 |
ttcatgtttaccatatccagttatgtaaggttcatttgattctggttgtttggcttcatgtttaccatatccagttatgt |
739 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26176674 |
ttcat-tttaccatatccagttatgtaaggttcatttgattctggttgtttggcttcatgtttaccatatccagttatgt |
26176752 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 81 - 336
Target Start/End: Original strand, 26176214 - 26176469
Alignment:
| Q |
81 |
aagtgctcctctcatggatttggcttgaggagatgcttcagggattgaaaagagttgaagaatacttgggagttgtgacatcgagaaaggaatggagtcg |
180 |
Q |
| |
|
||||||||||||||||||||||| |||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
26176214 |
aagtgctcctctcatggatttggtttgaagagattctttagggattgaaaagagttgaagaatacttgggagttgtgacatcgagaaaggaatggagttg |
26176313 |
T |
 |
| Q |
181 |
gcctcnnnnnnngagaggtaaggagaaacttcttggaccggaaattggagggtcattacatttccaatgtgaagatcatccaaactgaaatatcctgtct |
280 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||| |
|
|
| T |
26176314 |
gcctctttttttgagaggtaaggagaaacttcttggaccggaaattggaaggtcattacatttccaacgtgaagatcatccaaactaaaatatcctgtct |
26176413 |
T |
 |
| Q |
281 |
tgaaagcttctgtatgatccaaattaggaattgggagatcttctacggagttggta |
336 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
26176414 |
tgaaagcttctgtatgatccaagttaggaattgggagatcttctgcggagttggta |
26176469 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 373 - 602
Target Start/End: Original strand, 26176474 - 26176702
Alignment:
| Q |
373 |
ccagtaatgtaatttggttgcttggtttcatgtttaccatattgagttatgtaaggaccattggattcatggttatgggtcctatacccagtaatgtaat |
472 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| ||||| ||||||||||| || ||||||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
26176474 |
ccagtaatgtaatttggttgcttgccttcatgtttatcatatgaagttatgtaagctccgttggatttatggttatgggtcctatacccggtaatgtaat |
26176573 |
T |
 |
| Q |
473 |
tttgttgcttggtttcatgtttaccatattgagttatgtaaggaccattggattcatggttatgggtcctatacccggtaatgtaattttgttgcttggt |
572 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||| |
|
|
| T |
26176574 |
ttggttgcttggtttcatgtttaccatattgagttatgtaaggaccattggattcatggttatgggtcttatacccgataatgtaattttgttgtttggc |
26176673 |
T |
 |
| Q |
573 |
ttcatgtttaccatattgagttatgtaagg |
602 |
Q |
| |
|
||||| |||||||||| |||||||||||| |
|
|
| T |
26176674 |
ttcat-tttaccatatccagttatgtaagg |
26176702 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 7 - 317
Target Start/End: Original strand, 26180050 - 26180361
Alignment:
| Q |
7 |
aattcgagcatggactctagagaattggcacagatttttgtctcccctgtaacggtttccccttcgcactcttcaagtgctcctctcatggatttggctt |
106 |
Q |
| |
|
||||||||||||||||||||||| |||||||| | |||||||||||||||| ||||||| ||| |||||| |||||| | |||||||||| |||| |
|
|
| T |
26180050 |
aattcgagcatggactctagagagttggcacaagtctttgtctcccctgtaatggtttccgattcacactctccaagtgaatttatcatggatttagctt |
26180149 |
T |
 |
| Q |
107 |
gaggagatgcttcagggattgaaaagagttgaagaatacttgggagttgtgacatcgagaaaggaatggagtcggcctcnnnnnnngagaggtaaggaga |
206 |
Q |
| |
|
||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||| | | |||||||||||| ||||| ||||| ||||||| |
|
|
| T |
26180150 |
gaggagaatcttcagggattgataagagttgaagaacacttggaagttgtgacattgcaagaggaatggagtcagcctctttttttgagagaaaaggaga |
26180249 |
T |
 |
| Q |
207 |
aacttcttggaccggaaattggagggtcattacatttccaatgtgaagatcatccaaactgaaatatcctgtcttgaaagcttctgtatgatccaaatta |
306 |
Q |
| |
|
||| ||||||| |||||||| ||||||||||||||||||| | ||||||||||||| ||||| ||||| |||||||||||||||| ||||||| ||| |
|
|
| T |
26180250 |
aaccacttggacgggaaattgaagggtcattacatttccaacataaagatcatccaaattgaaaaatcctaccttgaaagcttctgtacgatccaagtta |
26180349 |
T |
 |
| Q |
307 |
gga-attgggag |
317 |
Q |
| |
|
||| |||||||| |
|
|
| T |
26180350 |
ggagattgggag |
26180361 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 370 - 515
Target Start/End: Original strand, 26176558 - 26176702
Alignment:
| Q |
370 |
tacccagtaatgtaatttggttgcttggtttcatgtttaccatattgagttatgtaaggaccattggattcatggttatgggtcctatacccagtaatgt |
469 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
26176558 |
tacccggtaatgtaatttggttgcttggtttcatgtttaccatattgagttatgtaaggaccattggattcatggttatgggtcttatacccgataatgt |
26176657 |
T |
 |
| Q |
470 |
aattttgttgcttggtttcatgtttaccatattgagttatgtaagg |
515 |
Q |
| |
|
|||||||||| |||| ||||| |||||||||| |||||||||||| |
|
|
| T |
26176658 |
aattttgttgtttggcttcat-tttaccatatccagttatgtaagg |
26176702 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 7 - 302
Target Start/End: Original strand, 26162253 - 26162548
Alignment:
| Q |
7 |
aattcgagcatggactctagagaattggcacagatttttgtctcccctgtaacggtttccccttcgcactcttcaagtgctcctctcatggatttggctt |
106 |
Q |
| |
|
|||||||||||||||||||| || || |||| | |||||||||||||||| ||||||| |||| |||| |||||||| |||| ||||||||| |||| |
|
|
| T |
26162253 |
aattcgagcatggactctagggagtttacacaagtctttgtctcccctgtaatggtttccgcttcacactgttcaagtgatcctaacatggatttagctt |
26162352 |
T |
 |
| Q |
107 |
gaggagatgcttcagggattgaaaagagttgaagaatacttgggagttgtgacatcgagaaaggaatggagtcggcctcnnnnnnngagaggtaaggaga |
206 |
Q |
| |
|
||||||| ||||||||||||| || ||||||| || |||||||||||||||||| | || |||||| ||||| ||||| |||||| || | || |
|
|
| T |
26162353 |
gaggagaatcttcagggattgagaaaagttgaaaaacacttgggagttgtgacattgcgagaggaattgagtcagcctctttttttgagaggaaacgtga |
26162452 |
T |
 |
| Q |
207 |
aacttcttggaccggaaattggagggtcattacatttccaatgtgaagatcatccaaactgaaatatcctgtcttgaaagcttctgtatgatccaa |
302 |
Q |
| |
|
|| ||||||| |||||||| ||||||||||||||||||| | ||||||||||||| ||||| ||||| ||||||||||||||| ||||||| |
|
|
| T |
26162453 |
aatctcttggatgggaaattgaagggtcattacatttccaacataaagatcatccaaattgaaaaatcctaccttgaaagcttctgtgcgatccaa |
26162548 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 7 - 276
Target Start/End: Original strand, 25929270 - 25929539
Alignment:
| Q |
7 |
aattcgagcatggactctagagaattggcacagatttttgtctcccctgtaacggtttccccttcgcactcttcaagtgctcctctcatggatttggctt |
106 |
Q |
| |
|
||||| ||||||||||||| ||| ||||||||| | || | ||||||||| |||| ||| ||| || | ||||||| | ||||||| ||||| |||| |
|
|
| T |
25929270 |
aattcaagcatggactctatagagttggcacaggtcttggactcccctgtgacgggttctgcttgacattgctcaagtgtttctctcattgattttgctt |
25929369 |
T |
 |
| Q |
107 |
gaggagatgcttcagggattgaaaagagttgaagaatacttgggagttgtgacatcgagaaaggaatggagtcggcctcnnnnnnngagaggtaaggaga |
206 |
Q |
| |
|
||||||| |||| |||||||||| ||||| |||| ||||||||||||||| || |||| |||||| ||||| ||||| || ||| || ||| |
|
|
| T |
25929370 |
gaggagagtcttcggggattgaaaggagttcgagaacacttgggagttgtgaaattgagagaggaattgagtcagcctcttttctcgaaaggaaattaga |
25929469 |
T |
 |
| Q |
207 |
aacttcttggaccggaaattggagggtcattacatttccaatgtgaagatcatccaaactgaaatatcct |
276 |
Q |
| |
|
|| ||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||| |
|
|
| T |
25929470 |
aatctcttggattggaaattggagggtcattacatttccaacatgaagatcatccaaattgaaaaatcct |
25929539 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 481 - 611
Target Start/End: Original strand, 26162757 - 26162887
Alignment:
| Q |
481 |
ttggtttcatgtttaccatattgagttatgtaaggaccattggattcatggttatgggtcctatacccggtaatgtaattttgttgcttggtttcatgtt |
580 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||| |||||||||||||| |||||||| | ||||||||| |||||| | | | ||||| |||||||| |
|
|
| T |
26162757 |
ttggcttcatgtttaccataggcagttatgtaaggttcattggattcatgggtatgggtcttgtacccggtagtgtaatctgggttcttggcttcatgtt |
26162856 |
T |
 |
| Q |
581 |
taccatattgagttatgtaaggaccattgga |
611 |
Q |
| |
|
|||||||||||||||||||||| |||||||| |
|
|
| T |
26162857 |
taccatattgagttatgtaaggtccattgga |
26162887 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 648 - 719
Target Start/End: Original strand, 26176715 - 26176786
Alignment:
| Q |
648 |
tggttgtttggcttcatgtttaccatatccagttatgtaaggttcatttgattctggttgtttggcttcatg |
719 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
26176715 |
tggttgtttggcttcatgtttaccatatccagttatgtaaggtttatttgattctagttgtttggcttcatg |
26176786 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 394 - 524
Target Start/End: Original strand, 26162757 - 26162887
Alignment:
| Q |
394 |
ttggtttcatgtttaccatattgagttatgtaaggaccattggattcatggttatgggtcctatacccagtaatgtaattttgttgcttggtttcatgtt |
493 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||| |||||||||||||| |||||||| | ||||| ||| |||||| | | | ||||| |||||||| |
|
|
| T |
26162757 |
ttggcttcatgtttaccataggcagttatgtaaggttcattggattcatgggtatgggtcttgtacccggtagtgtaatctgggttcttggcttcatgtt |
26162856 |
T |
 |
| Q |
494 |
taccatattgagttatgtaaggaccattgga |
524 |
Q |
| |
|
|||||||||||||||||||||| |||||||| |
|
|
| T |
26162857 |
taccatattgagttatgtaaggtccattgga |
26162887 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 417 - 527
Target Start/End: Original strand, 26162921 - 26163031
Alignment:
| Q |
417 |
agttatgtaaggaccattggattcatggttatgggtcctatacccagtaatgtaattttgttgcttggtttcatgtttaccatattgagttatgtaagga |
516 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||||| | ||||||||| |||||| ||| | ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
26162921 |
agttatgtaaggttcattggattcatgggtatgggttttgtacccagtagtgtaatcttggttcttggcttcatgtttaccatattgagttatgtaaggt |
26163020 |
T |
 |
| Q |
517 |
ccattggattc |
527 |
Q |
| |
|
||||||||||| |
|
|
| T |
26163021 |
ccattggattc |
26163031 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 568 - 727
Target Start/End: Original strand, 26162757 - 26162916
Alignment:
| Q |
568 |
ttggtttcatgtttaccatattgagttatgtaaggaccattggattcatggttatggatcttatagccactaatgtaatttggttgtttggcttcatgtt |
667 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||| |||||||||||||| ||||| |||| || || || |||||| ||| | ||||||||||||| |
|
|
| T |
26162757 |
ttggcttcatgtttaccataggcagttatgtaaggttcattggattcatgggtatgggtcttgtacccggtagtgtaatctgggttcttggcttcatgtt |
26162856 |
T |
 |
| Q |
668 |
taccatatccagttatgtaaggttcatttgattctggttgtttggcttcatgtttaccat |
727 |
Q |
| |
|
|||||||| ||||||||||||| |||| || || ||||||||| |||||||| |||||| |
|
|
| T |
26162857 |
taccatattgagttatgtaaggtccattggaatccggttgtttgacttcatgtctaccat |
26162916 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 504 - 614
Target Start/End: Original strand, 26162921 - 26163031
Alignment:
| Q |
504 |
agttatgtaaggaccattggattcatggttatgggtcctatacccggtaatgtaattttgttgcttggtttcatgtttaccatattgagttatgtaagga |
603 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||||| | ||||| ||| |||||| ||| | ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
26162921 |
agttatgtaaggttcattggattcatgggtatgggttttgtacccagtagtgtaatcttggttcttggcttcatgtttaccatattgagttatgtaaggt |
26163020 |
T |
 |
| Q |
604 |
ccattggattc |
614 |
Q |
| |
|
||||||||||| |
|
|
| T |
26163021 |
ccattggattc |
26163031 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 26175357 - 26175435
Alignment:
| Q |
7 |
aattcgagcatggactctagagaattggcacagatttttgtctcccctgtaacggtttccccttcgcactcttcaagtg |
85 |
Q |
| |
|
||||| ||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26175357 |
aattcaagcatgggctcttaagaattggcacagatctttgtctcccctgtaacggtttccccttcgcactcttcaagtg |
26175435 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 90 - 299
Target Start/End: Complemental strand, 25648570 - 25648361
Alignment:
| Q |
90 |
tctcatggatttggcttgaggagatgcttcagggattgaaaagagttgaagaatacttgggagttgtgacatcgagaaaggaatggagtcggcctcnnnn |
189 |
Q |
| |
|
|||||| ||||||||||| ||||| ||| ||||||||| ||||| || |||| |||| ||||| ||| | ||||||||||| |||| ||||| |
|
|
| T |
25648570 |
tctcatagatttggcttgtggagaatcttgagggattgacaagagatgtagaacccttgtgagttatgagagtgagaaaggaattgagttagcctccttt |
25648471 |
T |
 |
| Q |
190 |
nnngagaggtaaggagaaacttcttggaccggaaattggagggtcattacatttccaatgtgaagatcatccaaactgaaatatcctgtcttgaaagctt |
289 |
Q |
| |
|
|| ||| | ||| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||| |||| | ||| ||||||||||| |
|
|
| T |
25648470 |
ttcgaaaggaattgaggaactttttggaccggaaattggagggccattacatttccaacatgaagatcatccaaaccgaaaaagcctaacttgaaagctt |
25648371 |
T |
 |
| Q |
290 |
ctgtatgatc |
299 |
Q |
| |
|
|||| ||||| |
|
|
| T |
25648370 |
ctgtgtgatc |
25648361 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 591 - 728
Target Start/End: Original strand, 26162921 - 26163058
Alignment:
| Q |
591 |
agttatgtaaggaccattggattcatggttatggatcttatagccactaatgtaat-ttggttgtttggcttcatgtttaccatatccagttatgtaagg |
689 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||| | || || ||| || |||||| |||||| || ||||||||||||||||||| |||||||||||| |
|
|
| T |
26162921 |
agttatgtaaggttcattggattcatgggtatgggttttgtacccagtagtgtaatcttggttctt-ggcttcatgtttaccatattgagttatgtaagg |
26163019 |
T |
 |
| Q |
690 |
ttcatttgattctggttgtttggcttcatgtttaccata |
728 |
Q |
| |
|
| |||| ||||||| ||||||||| ||||| |||||||| |
|
|
| T |
26163020 |
tccattggattctgattgtttggcgtcatgattaccata |
26163058 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 655 - 739
Target Start/End: Original strand, 26163408 - 26163492
Alignment:
| Q |
655 |
ttggcttcatgtttaccatatccagttatgtaaggttcatttgattctggttgtttggcttcatgtttaccatatccagttatgt |
739 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||| |||| || ||||||||||||||||||||| ||||||| ||||||||| |
|
|
| T |
26163408 |
ttggctacatgtttaccatattgagttatgtaaggtccattggaatctggttgtttggcttcatgtctaccataggcagttatgt |
26163492 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 505 - 609
Target Start/End: Original strand, 26163627 - 26163731
Alignment:
| Q |
505 |
gttatgtaaggaccattggattcatggttatgggtcctatacccggtaatgtaattttgttgcttggtttcatgtttaccatattgagttatgtaaggac |
604 |
Q |
| |
|
||||||||||| |||||||||||||| |||||||| | ||||||||| ||||| | | | ||||| ||||||||||| |||||||||||||||||| | |
|
|
| T |
26163627 |
gttatgtaaggttcattggattcatgggtatgggtcttgtacccggtagtgtaacctggattcttggcttcatgtttactatattgagttatgtaaggtc |
26163726 |
T |
 |
| Q |
605 |
cattg |
609 |
Q |
| |
|
||||| |
|
|
| T |
26163727 |
cattg |
26163731 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 366 - 440
Target Start/End: Original strand, 26162957 - 26163031
Alignment:
| Q |
366 |
tttgtacccagtaatgtaat-ttggttgcttggtttcatgtttaccatattgagttatgtaaggaccattggattc |
440 |
Q |
| |
|
||||||||||||| |||||| |||||| ||||| |||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
26162957 |
tttgtacccagtagtgtaatcttggtt-cttggcttcatgtttaccatattgagttatgtaaggtccattggattc |
26163031 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 592 - 739
Target Start/End: Original strand, 26163627 - 26163774
Alignment:
| Q |
592 |
gttatgtaaggaccattggattcatggttatggatcttatagccactaatgtaatttggttgtttggcttcatgtttaccatatccagttatgtaaggtt |
691 |
Q |
| |
|
||||||||||| |||||||||||||| ||||| |||| || || || ||||| ||| | |||||||||||||||| |||| ||||||||||||| |
|
|
| T |
26163627 |
gttatgtaaggttcattggattcatgggtatgggtcttgtacccggtagtgtaacctggattcttggcttcatgtttactatattgagttatgtaaggtc |
26163726 |
T |
 |
| Q |
692 |
catttgattctggttgtttggcttcatgtttaccatatccagttatgt |
739 |
Q |
| |
|
|||| | |||||||||||| ||| |||| ||||||| |||||||||| |
|
|
| T |
26163727 |
cattgaaatctggttgtttgacttgatgtctaccatagccagttatgt |
26163774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 418 - 522
Target Start/End: Original strand, 26163627 - 26163731
Alignment:
| Q |
418 |
gttatgtaaggaccattggattcatggttatgggtcctatacccagtaatgtaattttgttgcttggtttcatgtttaccatattgagttatgtaaggac |
517 |
Q |
| |
|
||||||||||| |||||||||||||| |||||||| | ||||| ||| ||||| | | | ||||| ||||||||||| |||||||||||||||||| | |
|
|
| T |
26163627 |
gttatgtaaggttcattggattcatgggtatgggtcttgtacccggtagtgtaacctggattcttggcttcatgtttactatattgagttatgtaaggtc |
26163726 |
T |
 |
| Q |
518 |
cattg |
522 |
Q |
| |
|
||||| |
|
|
| T |
26163727 |
cattg |
26163731 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 476 - 611
Target Start/End: Original strand, 26163457 - 26163592
Alignment:
| Q |
476 |
gttgcttggtttcatgtttaccatattgagttatgtaaggaccattggattcatggttatgggtcctatacccggtaatgtaattttgttgcttggtttc |
575 |
Q |
| |
|
|||| |||| ||||||| ||||||| |||||||||||| ||||||||||||||| |||||||| | ||||||||| |||||| | | | | ||| ||| |
|
|
| T |
26163457 |
gttgtttggcttcatgtctaccataggcagttatgtaaggtccattggattcatgggtatgggtcttgtacccggtagtgtaatctgggttcctggcttc |
26163556 |
T |
 |
| Q |
576 |
atgtttaccatattgagttatgtaaggaccattgga |
611 |
Q |
| |
|
||||| |||||||||||||||||| ||||||| |
|
|
| T |
26163557 |
gtgtttgaaatattgagttatgtaaggtgcattgga |
26163592 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 367 - 437
Target Start/End: Original strand, 26162817 - 26162887
Alignment:
| Q |
367 |
ttgtacccagtaatgtaatttggttgcttggtttcatgtttaccatattgagttatgtaaggaccattgga |
437 |
Q |
| |
|
|||||||| ||| |||||| ||| | ||||| |||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
26162817 |
ttgtacccggtagtgtaatctgggttcttggcttcatgtttaccatattgagttatgtaaggtccattgga |
26162887 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 650 - 739
Target Start/End: Original strand, 26162698 - 26162787
Alignment:
| Q |
650 |
gttgtttggcttcatgtttaccatatccagttatgtaaggttcatttgattctggttgtttggcttcatgtttaccatatccagttatgt |
739 |
Q |
| |
|
||||||||||||||| |||||||||| ||| ||||||||| |||| | ||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
26162698 |
gttgtttggcttcatatttaccatattgagtaatgtaaggtccattggtttccaattgtttggcttcatgtttaccataggcagttatgt |
26162787 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 524
Target Start/End: Original strand, 26163455 - 26163592
Alignment:
| Q |
387 |
tggttgcttggtttcatgtttaccatattgagttatgtaaggaccattggattcatggttatgggtcctatacccagtaatgtaattttgttgcttggtt |
486 |
Q |
| |
|
|||||| |||| ||||||| ||||||| |||||||||||| ||||||||||||||| |||||||| | ||||| ||| |||||| | | | | ||| | |
|
|
| T |
26163455 |
tggttgtttggcttcatgtctaccataggcagttatgtaaggtccattggattcatgggtatgggtcttgtacccggtagtgtaatctgggttcctggct |
26163554 |
T |
 |
| Q |
487 |
tcatgtttaccatattgagttatgtaaggaccattgga |
524 |
Q |
| |
|
|| ||||| |||||||||||||||||| ||||||| |
|
|
| T |
26163555 |
tcgtgtttgaaatattgagttatgtaaggtgcattgga |
26163592 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 611
Target Start/End: Original strand, 26163175 - 26163310
Alignment:
| Q |
476 |
gttgcttggtttcatgtttaccatattgagttatgtaaggaccattggattcatggttatgggtcctatacccggtaatgtaattttgttgcttggtttc |
575 |
Q |
| |
|
|||| |||| || |||| ||||||| ||||||||||| | |||| |||||||| |||| || | ||||||||| |||||| | | | |||| ||| |
|
|
| T |
26163175 |
gttgtttggcttgatgtctaccatagggagttatgtaacgttcattagattcatgagtatgagtattgtacccggtagtgtaatctgggttcttgtcttc |
26163274 |
T |
 |
| Q |
576 |
atgtttaccatattgagttatgtaaggaccattgga |
611 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| |
|
|
| T |
26163275 |
atgtttaccatattgagttatgtaaggtccattgga |
26163310 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 504 - 611
Target Start/End: Original strand, 26163344 - 26163451
Alignment:
| Q |
504 |
agttatgtaaggaccattggattcatggttatgggtcctatacccggtaatgtaattttgttgcttggtttcatgtttaccatattgagttatgtaagga |
603 |
Q |
| |
|
|||||||||||| |||||||||||||| ||| || | ||||||||| |||||| | | ||||| | |||||||||||||||||||||||||||| |
|
|
| T |
26163344 |
agttatgtaaggtccattggattcatgagtataagttttgtacccggtagtgtaatctgcgtccttggctacatgtttaccatattgagttatgtaaggt |
26163443 |
T |
 |
| Q |
604 |
ccattgga |
611 |
Q |
| |
|
|||||||| |
|
|
| T |
26163444 |
ccattgga |
26163451 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 651 - 701
Target Start/End: Original strand, 26162753 - 26162803
Alignment:
| Q |
651 |
ttgtttggcttcatgtttaccatatccagttatgtaaggttcatttgattc |
701 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
26162753 |
ttgtttggcttcatgtttaccataggcagttatgtaaggttcattggattc |
26162803 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 367 - 437
Target Start/End: Original strand, 26163240 - 26163310
Alignment:
| Q |
367 |
ttgtacccagtaatgtaatttggttgcttggtttcatgtttaccatattgagttatgtaaggaccattgga |
437 |
Q |
| |
|
|||||||| ||| |||||| ||| | |||| |||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
26163240 |
ttgtacccggtagtgtaatctgggttcttgtcttcatgtttaccatattgagttatgtaaggtccattgga |
26163310 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 506 - 611
Target Start/End: Original strand, 26163064 - 26163169
Alignment:
| Q |
506 |
ttatgtaaggaccattggattcatggttatgggtcctatacccggtaatgtaattttgttgcttggtttcatgtttaccatattgagttatgtaaggacc |
605 |
Q |
| |
|
|||||||||| || |||| |||||| |||||||| | |||| |||| |||||| | | | ||||| ||||||| |||||||||||||||||||||| | |
|
|
| T |
26163064 |
ttatgtaaggtcctttggcctcatgggtatgggtcttgtaccgggtagtgtaatctgggttcttggcttcatgtgtaccatattgagttatgtaaggtct |
26163163 |
T |
 |
| Q |
606 |
attgga |
611 |
Q |
| |
|
|||||| |
|
|
| T |
26163164 |
attgga |
26163169 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 524
Target Start/End: Original strand, 26163169 - 26163310
Alignment:
| Q |
383 |
aatttggttgcttggtttcatgtttaccatattgagttatgtaaggaccattggattcatggttatgggtcctatacccagtaatgtaattttgttgctt |
482 |
Q |
| |
|
|||| ||||| |||| || |||| ||||||| ||||||||||| | |||| |||||||| |||| || | ||||| ||| |||||| | | | ||| |
|
|
| T |
26163169 |
aattcggttgtttggcttgatgtctaccatagggagttatgtaacgttcattagattcatgagtatgagtattgtacccggtagtgtaatctgggttctt |
26163268 |
T |
 |
| Q |
483 |
ggtttcatgtttaccatattgagttatgtaaggaccattgga |
524 |
Q |
| |
|
| |||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
26163269 |
gtcttcatgtttaccatattgagttatgtaaggtccattgga |
26163310 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 563 - 728
Target Start/End: Original strand, 26163457 - 26163622
Alignment:
| Q |
563 |
gttgcttggtttcatgtttaccatattgagttatgtaaggaccattggattcatggttatggatcttatagccactaatgtaatttggttgtttggcttc |
662 |
Q |
| |
|
|||| |||| ||||||| ||||||| |||||||||||| ||||||||||||||| ||||| |||| || || || |||||| ||| | ||||||| |
|
|
| T |
26163457 |
gttgtttggcttcatgtctaccataggcagttatgtaaggtccattggattcatgggtatgggtcttgtacccggtagtgtaatctgggttcctggcttc |
26163556 |
T |
 |
| Q |
663 |
atgtttaccatatccagttatgtaaggttcatttgattctggttgtttggcttcatgtttaccata |
728 |
Q |
| |
|
||||| |||| ||||||||||||| |||| || || |||||||| | ||||||| ||||||| |
|
|
| T |
26163557 |
gtgtttgaaatattgagttatgtaaggtgcattggaatccggttgtttagattcatgtctaccata |
26163622 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 417 - 524
Target Start/End: Original strand, 26163344 - 26163451
Alignment:
| Q |
417 |
agttatgtaaggaccattggattcatggttatgggtcctatacccagtaatgtaattttgttgcttggtttcatgtttaccatattgagttatgtaagga |
516 |
Q |
| |
|
|||||||||||| |||||||||||||| ||| || | ||||| ||| |||||| | | ||||| | |||||||||||||||||||||||||||| |
|
|
| T |
26163344 |
agttatgtaaggtccattggattcatgagtataagttttgtacccggtagtgtaatctgcgtccttggctacatgtttaccatattgagttatgtaaggt |
26163443 |
T |
 |
| Q |
517 |
ccattgga |
524 |
Q |
| |
|
|||||||| |
|
|
| T |
26163444 |
ccattgga |
26163451 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 366 - 437
Target Start/End: Original strand, 26163380 - 26163451
Alignment:
| Q |
366 |
tttgtacccagtaatgtaatttggttgcttggtttcatgtttaccatattgagttatgtaaggaccattgga |
437 |
Q |
| |
|
||||||||| ||| |||||| || | ||||| | |||||||||||||||||||||||||||| |||||||| |
|
|
| T |
26163380 |
tttgtacccggtagtgtaatctgcgtccttggctacatgtttaccatattgagttatgtaaggtccattgga |
26163451 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 664 - 729
Target Start/End: Original strand, 26162658 - 26162723
Alignment:
| Q |
664 |
tgtttaccatatccagttatgtaaggttcatttgattctggttgtttggcttcatgtttaccatat |
729 |
Q |
| |
|
||||||||||| || |||||||||| |||| |||||| ||||||||||||||| |||||||||| |
|
|
| T |
26162658 |
tgtttaccataagaagctatgtaaggtccattggattcttgttgtttggcttcatatttaccatat |
26162723 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 419 - 524
Target Start/End: Original strand, 26163064 - 26163169
Alignment:
| Q |
419 |
ttatgtaaggaccattggattcatggttatgggtcctatacccagtaatgtaattttgttgcttggtttcatgtttaccatattgagttatgtaaggacc |
518 |
Q |
| |
|
|||||||||| || |||| |||||| |||||||| | |||| ||| |||||| | | | ||||| ||||||| |||||||||||||||||||||| | |
|
|
| T |
26163064 |
ttatgtaaggtcctttggcctcatgggtatgggtcttgtaccgggtagtgtaatctgggttcttggcttcatgtgtaccatattgagttatgtaaggtct |
26163163 |
T |
 |
| Q |
519 |
attgga |
524 |
Q |
| |
|
|||||| |
|
|
| T |
26163164 |
attgga |
26163169 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 659 - 720
Target Start/End: Original strand, 26163271 - 26163332
Alignment:
| Q |
659 |
cttcatgtttaccatatccagttatgtaaggttcatttgattctggttgtttggcttcatgt |
720 |
Q |
| |
|
||||||||||||||||| ||||||||||||| |||| || ||| ||||||||| ||||||| |
|
|
| T |
26163271 |
cttcatgtttaccatattgagttatgtaaggtccattggaatctagttgtttggtttcatgt |
26163332 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 648 - 701
Target Start/End: Original strand, 26163455 - 26163508
Alignment:
| Q |
648 |
tggttgtttggcttcatgtttaccatatccagttatgtaaggttcatttgattc |
701 |
Q |
| |
|
||||||||||||||||||| ||||||| |||||||||||||| |||| ||||| |
|
|
| T |
26163455 |
tggttgtttggcttcatgtctaccataggcagttatgtaaggtccattggattc |
26163508 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 648 - 701
Target Start/End: Original strand, 26163737 - 26163790
Alignment:
| Q |
648 |
tggttgtttggcttcatgtttaccatatccagttatgtaaggttcatttgattc |
701 |
Q |
| |
|
|||||||||| ||| |||| ||||||| |||||||||||||||||||| ||||| |
|
|
| T |
26163737 |
tggttgtttgacttgatgtctaccatagccagttatgtaaggttcattggattc |
26163790 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 367 - 435
Target Start/End: Original strand, 26163663 - 26163731
Alignment:
| Q |
367 |
ttgtacccagtaatgtaatttggttgcttggtttcatgtttaccatattgagttatgtaaggaccattg |
435 |
Q |
| |
|
|||||||| ||| ||||| ||| | ||||| ||||||||||| |||||||||||||||||| |||||| |
|
|
| T |
26163663 |
ttgtacccggtagtgtaacctggattcttggcttcatgtttactatattgagttatgtaaggtccattg |
26163731 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 367 - 437
Target Start/End: Original strand, 26163099 - 26163169
Alignment:
| Q |
367 |
ttgtacccagtaatgtaatttggttgcttggtttcatgtttaccatattgagttatgtaaggaccattgga |
437 |
Q |
| |
|
||||||| ||| |||||| ||| | ||||| ||||||| |||||||||||||||||||||| | |||||| |
|
|
| T |
26163099 |
ttgtaccgggtagtgtaatctgggttcttggcttcatgtgtaccatattgagttatgtaaggtctattgga |
26163169 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 709 - 739
Target Start/End: Original strand, 26192977 - 26193007
Alignment:
| Q |
709 |
ttggcttcatgtttaccatatccagttatgt |
739 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
26192977 |
ttggcttcatgtttaccatatccagttatgt |
26193007 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 474 - 523
Target Start/End: Original strand, 26162696 - 26162745
Alignment:
| Q |
474 |
ttgttgcttggtttcatgtttaccatattgagttatgtaaggaccattgg |
523 |
Q |
| |
|
|||||| |||| ||||| ||||||||||||||| |||||||| ||||||| |
|
|
| T |
26162696 |
ttgttgtttggcttcatatttaccatattgagtaatgtaaggtccattgg |
26162745 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 561 - 610
Target Start/End: Original strand, 26162696 - 26162745
Alignment:
| Q |
561 |
ttgttgcttggtttcatgtttaccatattgagttatgtaaggaccattgg |
610 |
Q |
| |
|
|||||| |||| ||||| ||||||||||||||| |||||||| ||||||| |
|
|
| T |
26162696 |
ttgttgtttggcttcatatttaccatattgagtaatgtaaggtccattgg |
26162745 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 655 - 728
Target Start/End: Original strand, 26163126 - 26163199
Alignment:
| Q |
655 |
ttggcttcatgtttaccatatccagttatgtaaggttcatttgattctggttgtttggcttcatgtttaccata |
728 |
Q |
| |
|
|||||||||||| |||||||| ||||||||||||| ||| || | ||||||||||||| |||| ||||||| |
|
|
| T |
26163126 |
ttggcttcatgtgtaccatattgagttatgtaaggtctattggaattcggttgtttggcttgatgtctaccata |
26163199 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 73 - 270
Target Start/End: Complemental strand, 32189434 - 32189237
Alignment:
| Q |
73 |
cactcttcaagtgctcctctcatggatttggcttgaggagatgcttcagggattgaaaagagttgaagaatacttgggagttgtgacatcgagaaaggaa |
172 |
Q |
| |
|
|||| |||||||| | |||||| |||||||||| ||||| ||| ||||||||| ||||| || |||| |||| ||||||||| | |||| ||| | |
|
|
| T |
32189434 |
cactgttcaagtgtttttctcatatatttggcttgtggagaatcttgagggattgacaagagatgtagaactcttgtgagttgtgagagtgagagaggca |
32189335 |
T |
 |
| Q |
173 |
tggagtcggcctcnnnnnnngagaggtaaggagaaacttcttggaccggaaattggagggtcattacatttccaatgtgaagatcatccaaactgaaa |
270 |
Q |
| |
|
| ||||||||||| || ||| || ||| || || ||| ||||||||||||||||||||||||||||||| ||||||||| |||| ||||| |
|
|
| T |
32189334 |
ttgagtcggcctccttttttgaaaggaaatgaggaattttttgaaccggaaattggagggtcattacatttccaacacgaagatcattcaaattgaaa |
32189237 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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