View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3010R-Insertion-10 (Length: 282)

Name: NF3010R-Insertion-10
Description: NF3010R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3010R-Insertion-10
NF3010R-Insertion-10
[»] chr4 (40 HSPs)
chr4 (9-164)||(49634150-49634293)
chr4 (167-212)||(49634247-49634292)
chr4 (232-282)||(31852563-31852614)
chr4 (238-282)||(626938-626983)
chr4 (238-282)||(1457974-1458019)
chr4 (238-282)||(47890764-47890809)
chr4 (235-282)||(43978076-43978124)
chr4 (239-281)||(16342017-16342060)
chr4 (232-282)||(25726259-25726310)
chr4 (239-282)||(42081804-42081847)
chr4 (240-281)||(8433581-8433623)
chr4 (232-274)||(49634310-49634352)
chr4 (238-282)||(5304966-5305011)
chr4 (238-282)||(10141052-10141097)
chr4 (238-282)||(12581984-12582029)
chr4 (238-274)||(30057299-30057336)
chr4 (238-282)||(36132298-36132343)
chr4 (238-282)||(40994059-40994104)
chr4 (238-282)||(43147340-43147385)
chr4 (238-282)||(43596964-43597009)
chr4 (238-282)||(46774986-46775031)
chr4 (238-282)||(48569132-48569177)
chr4 (238-282)||(48950853-48950898)
chr4 (238-282)||(49757240-49757285)
chr4 (238-282)||(51791321-51791366)
chr4 (233-274)||(51890874-51890915)
chr4 (232-280)||(52483127-52483176)
chr4 (238-282)||(53572283-53572328)
chr4 (238-282)||(53634207-53634252)
chr4 (238-282)||(55536448-55536493)
chr4 (239-274)||(9761192-9761228)
chr4 (239-282)||(10417178-10417222)
chr4 (239-274)||(12267595-12267631)
chr4 (235-282)||(22230387-22230435)
chr4 (243-282)||(29329784-29329824)
chr4 (238-274)||(29406434-29406470)
chr4 (235-279)||(32293180-32293224)
chr4 (239-282)||(33107425-33107469)
chr4 (239-282)||(47934029-47934073)
chr4 (238-274)||(49264603-49264639)
[»] chr2 (35 HSPs)
chr2 (239-279)||(44666301-44666341)
chr2 (243-277)||(16904847-16904881)
chr2 (240-274)||(40403627-40403661)
chr2 (238-282)||(13773469-13773514)
chr2 (238-282)||(29772234-29772279)
chr2 (238-282)||(36182711-36182756)
chr2 (232-282)||(18278367-18278418)
chr2 (239-281)||(3287014-3287056)
chr2 (237-282)||(11093743-11093789)
chr2 (240-281)||(43936771-43936813)
chr2 (238-282)||(466562-466607)
chr2 (238-282)||(1309082-1309127)
chr2 (238-282)||(4562708-4562753)
chr2 (238-274)||(5112807-5112844)
chr2 (238-274)||(5613031-5613068)
chr2 (238-282)||(6331630-6331675)
chr2 (238-282)||(16384998-16385043)
chr2 (238-282)||(17499018-17499063)
chr2 (238-282)||(18694854-18694899)
chr2 (238-282)||(20296487-20296532)
chr2 (238-282)||(25857251-25857296)
chr2 (238-282)||(27913426-27913471)
chr2 (238-274)||(30390325-30390362)
chr2 (238-282)||(40535405-40535450)
chr2 (238-274)||(40688595-40688632)
chr2 (238-282)||(41509585-41509630)
chr2 (238-282)||(41566831-41566876)
chr2 (239-282)||(3439017-3439061)
chr2 (235-274)||(16040318-16040358)
chr2 (235-282)||(27359693-27359741)
chr2 (235-282)||(33233165-33233213)
chr2 (239-282)||(37486890-37486934)
chr2 (235-274)||(40473503-40473543)
chr2 (238-274)||(43214431-43214467)
chr2 (239-282)||(43398378-43398422)
[»] chr1 (44 HSPs)
chr1 (238-274)||(17058781-17058817)
chr1 (238-282)||(16526133-16526178)
chr1 (238-282)||(32589445-32589490)
chr1 (238-274)||(39670786-39670822)
chr1 (238-274)||(41927053-41927089)
chr1 (238-274)||(47469030-47469066)
chr1 (238-273)||(31401202-31401237)
chr1 (240-282)||(35283570-35283613)
chr1 (239-281)||(36726631-36726674)
chr1 (238-282)||(1570148-1570193)
chr1 (238-282)||(6438020-6438065)
chr1 (238-282)||(7166183-7166228)
chr1 (238-282)||(8984462-8984507)
chr1 (238-282)||(11215070-11215115)
chr1 (238-282)||(12502210-12502255)
chr1 (238-282)||(13773237-13773282)
chr1 (238-282)||(15819557-15819602)
chr1 (238-282)||(18467154-18467199)
chr1 (238-282)||(18534070-18534115)
chr1 (238-282)||(18551589-18551634)
chr1 (238-282)||(22563455-22563500)
chr1 (233-274)||(26824268-26824309)
chr1 (233-274)||(31124590-31124631)
chr1 (238-282)||(32594320-32594365)
chr1 (238-274)||(40375271-40375308)
chr1 (238-282)||(40519499-40519544)
chr1 (238-282)||(45333668-45333713)
chr1 (238-282)||(45517224-45517269)
chr1 (238-282)||(48897073-48897118)
chr1 (238-281)||(2277824-2277868)
chr1 (238-281)||(4482554-4482598)
chr1 (239-274)||(4553503-4553539)
chr1 (238-274)||(7491838-7491874)
chr1 (232-271)||(7961783-7961823)
chr1 (238-281)||(19011425-19011469)
chr1 (238-274)||(23991221-23991257)
chr1 (239-282)||(25999919-25999963)
chr1 (239-282)||(27642684-27642728)
chr1 (238-281)||(32970757-32970801)
chr1 (238-274)||(36666533-36666569)
chr1 (238-274)||(41620456-41620492)
chr1 (235-282)||(42458156-42458204)
chr1 (243-282)||(44019345-44019385)
chr1 (238-274)||(45416135-45416171)
[»] chr8 (46 HSPs)
chr8 (235-274)||(3949035-3949074)
chr8 (240-274)||(20894658-20894692)
chr8 (238-282)||(94467-94512)
chr8 (238-282)||(11875955-11876000)
chr8 (238-282)||(11890962-11891007)
chr8 (238-282)||(14876558-14876603)
chr8 (238-282)||(34413131-34413176)
chr8 (235-274)||(1632393-1632433)
chr8 (238-274)||(15856463-15856499)
chr8 (238-274)||(22274568-22274604)
chr8 (232-282)||(1337065-1337116)
chr8 (241-279)||(38402323-38402361)
chr8 (238-282)||(2787037-2787082)
chr8 (238-282)||(7816472-7816517)
chr8 (238-282)||(8265337-8265382)
chr8 (238-282)||(9187179-9187224)
chr8 (238-282)||(10736830-10736875)
chr8 (238-282)||(11787220-11787265)
chr8 (238-282)||(16449194-16449239)
chr8 (238-282)||(17698591-17698636)
chr8 (238-282)||(23858266-23858311)
chr8 (238-282)||(28909534-28909579)
chr8 (238-282)||(29514695-29514740)
chr8 (242-282)||(29716929-29716970)
chr8 (238-282)||(31450913-31450958)
chr8 (238-282)||(32719564-32719609)
chr8 (238-282)||(33838393-33838438)
chr8 (238-282)||(34266081-34266126)
chr8 (238-282)||(37717432-37717477)
chr8 (238-282)||(38219524-38219569)
chr8 (238-282)||(39587616-39587661)
chr8 (238-282)||(43085179-43085224)
chr8 (238-282)||(43186922-43186967)
chr8 (238-282)||(43856338-43856383)
chr8 (239-282)||(2792848-2792892)
chr8 (239-282)||(5332985-5333029)
chr8 (239-282)||(6942488-6942532)
chr8 (239-282)||(11491866-11491910)
chr8 (239-282)||(13647414-13647458)
chr8 (239-282)||(13747839-13747883)
chr8 (238-274)||(25812166-25812202)
chr8 (239-282)||(34472366-34472410)
chr8 (239-282)||(37535456-37535500)
chr8 (239-282)||(38344118-38344162)
chr8 (239-282)||(43283923-43283967)
chr8 (238-274)||(43847012-43847048)
[»] chr5 (32 HSPs)
chr5 (236-278)||(35796037-35796079)
chr5 (232-272)||(17967568-17967609)
chr5 (235-282)||(6518729-6518777)
chr5 (235-282)||(42320386-42320434)
chr5 (232-274)||(29045946-29045989)
chr5 (240-274)||(33735975-33736009)
chr5 (238-282)||(2301527-2301572)
chr5 (238-282)||(4745832-4745877)
chr5 (238-282)||(8968818-8968863)
chr5 (238-282)||(9835102-9835147)
chr5 (238-282)||(10404196-10404241)
chr5 (238-282)||(11146485-11146530)
chr5 (238-282)||(11795562-11795607)
chr5 (238-282)||(12463825-12463870)
chr5 (238-282)||(21749334-21749379)
chr5 (238-282)||(22569201-22569246)
chr5 (238-282)||(25400323-25400368)
chr5 (238-282)||(25648040-25648085)
chr5 (238-282)||(27765326-27765371)
chr5 (237-281)||(40081948-40081993)
chr5 (235-282)||(988783-988831)
chr5 (239-282)||(11786017-11786061)
chr5 (239-282)||(11897317-11897361)
chr5 (239-282)||(16891415-16891459)
chr5 (239-282)||(18638667-18638711)
chr5 (232-279)||(20719810-20719858)
chr5 (238-274)||(34208451-34208487)
chr5 (239-282)||(36124468-36124512)
chr5 (239-282)||(39886169-39886213)
chr5 (239-282)||(41319408-41319452)
chr5 (239-282)||(42525469-42525513)
chr5 (239-282)||(43580947-43580991)
[»] chr7 (40 HSPs)
chr7 (238-282)||(3766880-3766925)
chr7 (239-282)||(44616671-44616715)
chr7 (239-274)||(12007753-12007788)
chr7 (238-281)||(27424909-27424952)
chr7 (233-274)||(2527338-2527380)
chr7 (237-282)||(30388462-30388508)
chr7 (238-282)||(3062843-3062888)
chr7 (238-282)||(4960853-4960898)
chr7 (233-282)||(7778948-7778997)
chr7 (233-274)||(7836888-7836929)
chr7 (238-282)||(12264123-12264168)
chr7 (238-282)||(12640545-12640590)
chr7 (238-282)||(19331456-19331501)
chr7 (238-282)||(27510213-27510258)
chr7 (238-282)||(28547737-28547782)
chr7 (238-282)||(29617474-29617519)
chr7 (238-282)||(31026288-31026333)
chr7 (238-282)||(31727748-31727793)
chr7 (238-282)||(32619419-32619464)
chr7 (238-282)||(35645668-35645713)
chr7 (238-282)||(35950197-35950242)
chr7 (238-282)||(38889449-38889494)
chr7 (233-274)||(41331031-41331072)
chr7 (238-282)||(42443758-42443803)
chr7 (238-282)||(43633046-43633091)
chr7 (238-282)||(48119539-48119584)
chr7 (238-282)||(48719868-48719913)
chr7 (243-282)||(3524218-3524258)
chr7 (239-282)||(3529849-3529893)
chr7 (238-274)||(4611315-4611351)
chr7 (239-282)||(7401344-7401388)
chr7 (235-274)||(7525521-7525561)
chr7 (239-274)||(12615828-12615864)
chr7 (238-274)||(12935817-12935853)
chr7 (239-282)||(24061286-24061330)
chr7 (238-281)||(24781100-24781144)
chr7 (239-282)||(31077860-31077904)
chr7 (238-282)||(32750085-32750129)
chr7 (238-274)||(47194381-47194417)
chr7 (239-282)||(48269343-48269387)
[»] chr3 (49 HSPs)
chr3 (238-282)||(10349469-10349514)
chr3 (233-282)||(44764789-44764838)
chr3 (235-282)||(52945963-52946011)
chr3 (239-274)||(29531291-29531326)
chr3 (232-282)||(40910130-40910181)
chr3 (233-282)||(31327669-31327719)
chr3 (238-282)||(2007039-2007084)
chr3 (238-282)||(2522995-2523040)
chr3 (238-282)||(4139069-4139114)
chr3 (238-282)||(6488193-6488238)
chr3 (238-282)||(6919919-6919964)
chr3 (238-282)||(7270024-7270069)
chr3 (238-282)||(8964732-8964777)
chr3 (238-282)||(10482809-10482854)
chr3 (238-282)||(15975221-15975266)
chr3 (238-282)||(15975364-15975409)
chr3 (238-282)||(17218557-17218602)
chr3 (241-281)||(17472289-17472330)
chr3 (238-282)||(18194407-18194452)
chr3 (238-282)||(22501887-22501932)
chr3 (233-274)||(24303467-24303508)
chr3 (238-282)||(30555183-30555228)
chr3 (238-274)||(32429824-32429861)
chr3 (238-282)||(33606896-33606941)
chr3 (238-282)||(33706683-33706728)
chr3 (238-282)||(37488416-37488461)
chr3 (238-282)||(37800567-37800612)
chr3 (238-282)||(40548372-40548417)
chr3 (238-282)||(40933787-40933832)
chr3 (238-282)||(44626104-44626149)
chr3 (238-282)||(45551765-45551810)
chr3 (238-282)||(48251641-48251686)
chr3 (238-282)||(50234193-50234238)
chr3 (238-282)||(50496770-50496815)
chr3 (238-282)||(53578024-53578069)
chr3 (239-282)||(3894613-3894657)
chr3 (239-274)||(4860238-4860274)
chr3 (239-274)||(4880246-4880282)
chr3 (238-274)||(5173967-5174003)
chr3 (235-274)||(11436581-11436621)
chr3 (235-282)||(14887299-14887347)
chr3 (239-282)||(17729060-17729104)
chr3 (239-282)||(19030289-19030333)
chr3 (238-281)||(31327457-31327501)
chr3 (235-274)||(32144661-32144701)
chr3 (239-282)||(38819281-38819325)
chr3 (239-274)||(45512952-45512988)
chr3 (238-281)||(45701414-45701458)
chr3 (239-282)||(52410198-52410242)
[»] chr6 (21 HSPs)
chr6 (239-282)||(22574939-22574983)
chr6 (238-282)||(24319082-24319126)
chr6 (238-274)||(216283-216320)
chr6 (238-282)||(3794129-3794174)
chr6 (238-282)||(3795730-3795775)
chr6 (238-282)||(7207913-7207958)
chr6 (238-282)||(7328603-7328648)
chr6 (238-274)||(8297704-8297741)
chr6 (238-282)||(9888481-9888526)
chr6 (238-282)||(10517268-10517313)
chr6 (238-282)||(17441795-17441840)
chr6 (238-282)||(19953784-19953829)
chr6 (238-282)||(27218953-27218998)
chr6 (238-282)||(28148689-28148734)
chr6 (238-282)||(28222931-28222976)
chr6 (238-282)||(32166438-32166483)
chr6 (238-282)||(32611510-32611555)
chr6 (238-282)||(33573886-33573931)
chr6 (239-282)||(3640583-3640627)
chr6 (239-282)||(26347473-26347517)
chr6 (239-282)||(31802122-31802166)
[»] scaffold0079 (1 HSPs)
scaffold0079 (239-281)||(50801-50844)
[»] scaffold0690 (1 HSPs)
scaffold0690 (238-282)||(3735-3780)
[»] scaffold0445 (1 HSPs)
scaffold0445 (238-282)||(3970-4015)
[»] scaffold0179 (1 HSPs)
scaffold0179 (238-282)||(6046-6091)
[»] scaffold0128 (1 HSPs)
scaffold0128 (238-282)||(17689-17734)
[»] scaffold0038 (1 HSPs)
scaffold0038 (238-282)||(23429-23474)
[»] scaffold1185 (1 HSPs)
scaffold1185 (238-281)||(2349-2393)
[»] scaffold0608 (1 HSPs)
scaffold0608 (238-281)||(9036-9080)
[»] scaffold0028 (1 HSPs)
scaffold0028 (238-281)||(112178-112222)
[»] scaffold0024 (1 HSPs)
scaffold0024 (239-282)||(59852-59896)


Alignment Details
Target: chr4 (Bit Score: 107; Significance: 1e-53; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 9 - 164
Target Start/End: Original strand, 49634150 - 49634293
Alignment:
Q  9 caaatattcatatcgtacgtttctaattttaattactaccgtttttaaatgcaatatagttatttctttatgtgaataactataattattttacatgata 108  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  49634150 caaatattcatatcgtacgtttctaattttaatcactaccgtttttaaatgcaatatagttatttctttatgtgaataactataattattttacatg--- 49634246  T
Q  109 tgttattcaataagagcaataattacagtaaatgataaacttaaacaaataatatt 164  Q
             |||||||||||||||| ||||||||||||||||||||||||||||||    
T  49634247 ---------ataagagcaataattaaagtaaatgataaacttaaacaaataatatt 49634293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 49634247 - 49634292
Alignment:
Q  167 ataagagcaataattacagtaaatgatagacttaaacaaataatat 212  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||    
T  49634247 ataagagcaataattaaagtaaatgataaacttaaacaaataatat 49634292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 31852563 - 31852614
Alignment:
Q  232 aaataacctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    |||||||||||||| |||||||||||||||| |||||||||||| |||||||    
T  31852563 aaataacctagtggctagagctcacacaattaaattgtggagaaatggagtg 31852614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 626938 - 626983
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||    
T  626938 cctagtggttagagctcacacaatttaattgtggagaagtggagtg 626983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 1457974 - 1458019
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||    
T  1457974 cctagtggttagagctcacacaatttaattgtggagaagtggagtg 1458019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 47890809 - 47890764
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||    
T  47890809 cctagtggttagagctcacacaatttaattgtggagaagtggagtg 47890764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 282
Target Start/End: Complemental strand, 43978124 - 43978076
Alignment:
Q  235 taacctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    ||||||||||||||||||||| |||||| |||||||||||| |||||||    
T  43978124 taacctagtggttagagctcatacaattaaattgtggagaagtggagtg 43978076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 281
Target Start/End: Complemental strand, 16342060 - 16342017
Alignment:
Q  239 ctagtggttagagctcacacaatt-aattgtggagaattggagt 281  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  16342060 ctagtggttagagctcacacaattaaattgtggagaaatggagt 16342017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 25726259 - 25726310
Alignment:
Q  232 aaataacctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    ||||| ||||||||||||||||| ||||||| |||||||||||| |||||||    
T  25726259 aaatagcctagtggttagagctcgcacaattaaattgtggagaagtggagtg 25726310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 42081847 - 42081804
Alignment:
Q  239 ctagtggttagagctcacacaattaattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||||||| ||||||||| |||||||    
T  42081847 ctagtgggtagagctcacacaattaaatgtggagaagtggagtg 42081804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 281
Target Start/End: Original strand, 8433581 - 8433623
Alignment:
Q  240 tagtggttagagctcacacaatt-aattgtggagaattggagt 281  Q
    |||||| |||||||||||||||| |||||||||||||||||||    
T  8433581 tagtggctagagctcacacaatttaattgtggagaattggagt 8433623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 274
Target Start/End: Original strand, 49634310 - 49634352
Alignment:
Q  232 aaataacctagtggttagagctcacacaattaattgtggagaa 274  Q
    ||||||| |||||| ||||||| ||||||||||||||||||||    
T  49634310 aaataacttagtggctagagcttacacaattaattgtggagaa 49634352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 5304966 - 5305011
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  5304966 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 5305011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 10141097 - 10141052
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  10141097 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 10141052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 12581984 - 12582029
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  12581984 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 12582029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 30057336 - 30057299
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaa 274  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  30057336 cctagtggttagagctcacacaatttaattgtggagaa 30057299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 36132343 - 36132298
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||||||||| ||||||||| |||||||||||||| |||||||    
T  36132343 cctagtggttagacctcacacaatttaattgtggagaagtggagtg 36132298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 40994059 - 40994104
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  40994059 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 40994104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 43147340 - 43147385
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  43147340 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 43147385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 43597009 - 43596964
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  43597009 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 43596964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 46774986 - 46775031
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  46774986 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 46775031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 48569132 - 48569177
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||    
T  48569132 cctagtggctagagctcacacaattaaattgtggagaagtggagtg 48569177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 48950898 - 48950853
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  48950898 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 48950853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 49757240 - 49757285
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  49757240 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 49757285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 51791366 - 51791321
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||||||||||||||||||| ||||||||| |||| |||||||    
T  51791366 cctagtggttagagctcacacaatttaattgtgaagaagtggagtg 51791321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 51890915 - 51890874
Alignment:
Q  233 aataacctagtggttagagctcacacaattaattgtggagaa 274  Q
    |||| |||||||| |||||||||||||||||| |||||||||    
T  51890915 aatagcctagtggctagagctcacacaattaaatgtggagaa 51890874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 52483127 - 52483176
Alignment:
Q  232 aaataacctagtggttagagctcacacaa-ttaattgtggagaattggag 280  Q
    |||||||||||||||||||||||  |||| |||||||||||||| |||||    
T  52483127 aaataacctagtggttagagctcgtacaatttaattgtggagaagtggag 52483176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 53572283 - 53572328
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    |||||||||||| |||||||||||| |||||||||||| |||||||    
T  53572283 cctagtggttagcgctcacacaattaaattgtggagaagtggagtg 53572328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 53634207 - 53634252
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  53634207 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 53634252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 55536493 - 55536448
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  55536493 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 55536448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 274
Target Start/End: Complemental strand, 9761228 - 9761192
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaa 274  Q
    |||||||||||||||||||||| ||||||||||||||    
T  9761228 ctagtggttagagctcacacaatttaattgtggagaa 9761192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Original strand, 10417178 - 10417222
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||    
T  10417178 ctagtggctagagctcacacaatttaattgtggagaagtggagtg 10417222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 274
Target Start/End: Complemental strand, 12267631 - 12267595
Alignment:
Q  239 ctagtggttagagctcacacaatta-attgtggagaa 274  Q
    ||||||||||||||||||||||||| |||||||||||    
T  12267631 ctagtggttagagctcacacaattatattgtggagaa 12267595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 282
Target Start/End: Original strand, 22230387 - 22230435
Alignment:
Q  235 taacctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||||||||| ||||||||||| |||||||| ||||| |||||||    
T  22230387 taacctagtggttaaagctcacacaatttaattgttgagaagtggagtg 22230435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 29329784 - 29329824
Alignment:
Q  243 tggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||||||||||||| |||||||||||||| |||||||    
T  29329784 tggttagagctcacacaatttaattgtggagaagtggagtg 29329824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 29406470 - 29406434
Alignment:
Q  238 cctagtggttagagctcacacaattaattgtggagaa 274  Q
    |||||||||| |||||||||||||||| |||||||||    
T  29406470 cctagtggttggagctcacacaattaaatgtggagaa 29406434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 32293224 - 32293180
Alignment:
Q  235 taacctagtggttagagctcacacaattaattgtggagaattgga 279  Q
    ||||||||||| ||||||||||| |||||| ||||||||| ||||    
T  32293224 taacctagtggctagagctcacataattaaatgtggagaagtgga 32293180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 33107469 - 33107425
Alignment:
Q  239 ctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    |||||||||||||||| ||||||| |||||||||||| |||||||    
T  33107469 ctagtggttagagctcgcacaattaaattgtggagaagtggagtg 33107425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Original strand, 47934029 - 47934073
Alignment:
Q  239 ctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||||| |||||||||||| |||||||    
T  47934029 ctagtggctagagctcacacaattaaattgtggagaagtggagtg 47934073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 49264639 - 49264603
Alignment:
Q  238 cctagtggttagagctcacacaattaattgtggagaa 274  Q
    |||||||| |||||||||||||||||| |||||||||    
T  49264639 cctagtggctagagctcacacaattaaatgtggagaa 49264603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000006; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 239 - 279
Target Start/End: Original strand, 44666301 - 44666341
Alignment:
Q  239 ctagtggttagagctcacacaattaattgtggagaattgga 279  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  44666301 ctagtggttagagctcacacaattaattgtggagaagtgga 44666341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 277
Target Start/End: Complemental strand, 16904881 - 16904847
Alignment:
Q  243 tggttagagctcacacaattaattgtggagaattg 277  Q
    |||||||||||||||||||||||||||||||||||    
T  16904881 tggttagagctcacacaattaattgtggagaattg 16904847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 274
Target Start/End: Complemental strand, 40403661 - 40403627
Alignment:
Q  240 tagtggttagagctcacacaattaattgtggagaa 274  Q
    |||||||||||||||||||||||||||||||||||    
T  40403661 tagtggttagagctcacacaattaattgtggagaa 40403627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 13773514 - 13773469
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||    
T  13773514 cctagtggttagagctcacacaatttaattgtggagaagtggagtg 13773469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 29772234 - 29772279
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||    
T  29772234 cctagtggctagagctcacacaattaaattgtggagaattggagtg 29772279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 36182756 - 36182711
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||    
T  36182756 cctagtggttagagctcacacaatttaattgtggagaagtggagtg 36182711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 18278367 - 18278418
Alignment:
Q  232 aaataacctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||| |||||||| |||||||||||||| |||||||||||||| |||||||    
T  18278367 aaatagcctagtggctagagctcacacaatttaattgtggagaagtggagtg 18278418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 3287014 - 3287056
Alignment:
Q  239 ctagtggttagagctcacacaattaattgtggagaattggagt 281  Q
    ||||||| |||||||||||||||||| ||||||||| ||||||    
T  3287014 ctagtggctagagctcacacaattaaatgtggagaagtggagt 3287056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 237 - 282
Target Start/End: Original strand, 11093743 - 11093789
Alignment:
Q  237 acctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||||    
T  11093743 acctaatggttagagctcacacaatttaattgtggagaagtggagtg 11093789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 281
Target Start/End: Complemental strand, 43936813 - 43936771
Alignment:
Q  240 tagtggttagagctcacacaa-ttaattgtggagaattggagt 281  Q
    ||||||||||||||||||||| |||||||||||||| ||||||    
T  43936813 tagtggttagagctcacacaatttaattgtggagaagtggagt 43936771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 466562 - 466607
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    |||||||| ||||| |||||||||| ||||||||||||||||||||    
T  466562 cctagtggatagagttcacacaatttaattgtggagaattggagtg 466607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 1309082 - 1309127
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  1309082 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 1309127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 4562708 - 4562753
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  4562708 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 4562753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 5112807 - 5112844
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaa 274  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  5112807 cctagtggttagagctcacacaatttaattgtggagaa 5112844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 5613068 - 5613031
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaa 274  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  5613068 cctagtggttagagctcacacaattaaattgtggagaa 5613031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 6331675 - 6331630
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  6331675 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 6331630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 16384998 - 16385043
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  16384998 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 16385043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 17499063 - 17499018
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  17499063 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 17499018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 18694899 - 18694854
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  18694899 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 18694854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 20296532 - 20296487
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  20296532 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 20296487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 25857251 - 25857296
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  25857251 cctagtggctagagctcacacaagttaattgtggagaagtggagtg 25857296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 27913426 - 27913471
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    |||||||||||||||| |||||||| |||||||||||| |||||||    
T  27913426 cctagtggttagagcttacacaattaaattgtggagaagtggagtg 27913471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 30390325 - 30390362
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaa 274  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  30390325 cctagtggttagagctcacacaattaaattgtggagaa 30390362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 40535405 - 40535450
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  40535405 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 40535450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 40688595 - 40688632
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaa 274  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  40688595 cctagtggttagagctcacacaatttaattgtggagaa 40688632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 41509630 - 41509585
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  41509630 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 41509585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 41566876 - 41566831
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||    
T  41566876 cctagtggctagagctcacacaattaaattgtggagaagtggagtg 41566831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 3439061 - 3439017
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||    
T  3439061 ctagtggctagagctcacacaatttaattgtggagaagtggagtg 3439017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 274
Target Start/End: Complemental strand, 16040358 - 16040318
Alignment:
Q  235 taacctagtggttagagctcacacaa-ttaattgtggagaa 274  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  16040358 taacttagtggttagagctcacacaatttaattgtggagaa 16040318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 282
Target Start/End: Complemental strand, 27359741 - 27359693
Alignment:
Q  235 taacctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||||||||| |||||||||||| ||||||||||| || |||||||    
T  27359741 taacctagtggttggagctcacacaatttaattgtggataagtggagtg 27359693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 282
Target Start/End: Original strand, 33233165 - 33233213
Alignment:
Q  235 taacctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||||||| |||| ||||||||| |||||||||||||| |||||||    
T  33233165 taacctagtggctagaactcacacaatttaattgtggagaagtggagtg 33233213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Original strand, 37486890 - 37486934
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||    
T  37486890 ctagtggctagagctcacacaatttaattgtggagaagtggagtg 37486934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 274
Target Start/End: Original strand, 40473503 - 40473543
Alignment:
Q  235 taacctagtggttagagctcacacaa-ttaattgtggagaa 274  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  40473503 taacctagtggctagagctcacacaatttaattgtggagaa 40473543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 43214467 - 43214431
Alignment:
Q  238 cctagtggttagagctcacacaattaattgtggagaa 274  Q
    |||||||||||||||||||||||||||  ||||||||    
T  43214467 cctagtggttagagctcacacaattaaacgtggagaa 43214431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 43398422 - 43398378
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||||||||||||||||| |||||||| ||||| |||||||    
T  43398422 ctagtggttagagctcacacaatttaattgttgagaagtggagtg 43398378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000006; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 17058817 - 17058781
Alignment:
Q  238 cctagtggttagagctcacacaattaattgtggagaa 274  Q
    |||||||||||||||||||||||||||||||||||||    
T  17058817 cctagtggttagagctcacacaattaattgtggagaa 17058781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 16526133 - 16526178
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||    
T  16526133 cctagtggttagagctcacacaatttaattgtggagaagtggagtg 16526178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 32589445 - 32589490
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||    
T  32589445 cctagtggttagagctcacacaatttaattgtggagaagtggagtg 32589490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 39670786 - 39670822
Alignment:
Q  238 cctagtggttagagctcacacaattaattgtggagaa 274  Q
    ||||||||||||||||||||||||||| |||||||||    
T  39670786 cctagtggttagagctcacacaattaaatgtggagaa 39670822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 41927089 - 41927053
Alignment:
Q  238 cctagtggttagagctcacacaattaattgtggagaa 274  Q
    ||||||||||||||||||||||||||| |||||||||    
T  41927089 cctagtggttagagctcacacaattaaatgtggagaa 41927053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 47469030 - 47469066
Alignment:
Q  238 cctagtggttagagctcacacaattaattgtggagaa 274  Q
    ||||||||||||||||||||||||||| |||||||||    
T  47469030 cctagtggttagagctcacacaattaaatgtggagaa 47469066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 238 - 273
Target Start/End: Original strand, 31401202 - 31401237
Alignment:
Q  238 cctagtggttagagctcacacaattaattgtggaga 273  Q
    |||||||||||||||||||||| |||||||||||||    
T  31401202 cctagtggttagagctcacacagttaattgtggaga 31401237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 240 - 282
Target Start/End: Complemental strand, 35283613 - 35283570
Alignment:
Q  240 tagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  35283613 tagtggttagagctcacacaattaaattgtggagaagtggagtg 35283570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 281
Target Start/End: Complemental strand, 36726674 - 36726631
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagt 281  Q
    |||||||||||||||||||||| |||||||||||||| ||||||    
T  36726674 ctagtggttagagctcacacaatttaattgtggagaagtggagt 36726631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 1570148 - 1570193
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  1570148 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 1570193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 6438020 - 6438065
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  6438020 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 6438065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 7166183 - 7166228
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||    
T  7166183 cctagtggctagagctcacacaattaaattgtggagaagtggagtg 7166228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 8984462 - 8984507
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  8984462 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 8984507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 11215115 - 11215070
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||    
T  11215115 cctagtggctagagctcacacaattaaattgtggagaagtggagtg 11215070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 12502210 - 12502255
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  12502210 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 12502255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 13773282 - 13773237
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  13773282 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 13773237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 15819557 - 15819602
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  15819557 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 15819602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 18467154 - 18467199
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||    
T  18467154 cctagtggctagagctcacacaattaaattgtggagaagtggagtg 18467199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 18534115 - 18534070
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  18534115 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 18534070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 18551589 - 18551634
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||||||||||||| ||||| |||||||||||||| |||||||    
T  18551589 cctagtggttagagctcgcacaatttaattgtggagaagtggagtg 18551634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 22563500 - 22563455
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||    
T  22563500 cctagtggctagagctcacacaattaaattgtggagaagtggagtg 22563455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 26824309 - 26824268
Alignment:
Q  233 aataacctagtggttagagctcacacaattaattgtggagaa 274  Q
    |||| |||||||| |||||||||||||||||| |||||||||    
T  26824309 aatagcctagtggctagagctcacacaattaaatgtggagaa 26824268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 31124590 - 31124631
Alignment:
Q  233 aataacctagtggttagagctcacacaattaattgtggagaa 274  Q
    |||| |||||||| |||||||||||||||||| |||||||||    
T  31124590 aatagcctagtggctagagctcacacaattaaatgtggagaa 31124631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 32594365 - 32594320
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  32594365 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 32594320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 40375271 - 40375308
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaa 274  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  40375271 cctagtggttagagctcacacaatttaattgtggagaa 40375308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 40519499 - 40519544
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  40519499 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 40519544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 45333668 - 45333713
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||    
T  45333668 cctagtggctagagctcacacaattaaattgtggagaagtggagtg 45333713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 45517224 - 45517269
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||    
T  45517224 cctagtggctagagctcacacaattaaattgtggagaagtggagtg 45517269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 48897073 - 48897118
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    ||||||||||||||||||||||||| |||| ||||||| |||||||    
T  48897073 cctagtggttagagctcacacaattaaattatggagaagtggagtg 48897118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 281
Target Start/End: Complemental strand, 2277868 - 2277824
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagt 281  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||    
T  2277868 cctagtggctagagctcacacaatttaattgtggagaagtggagt 2277824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 281
Target Start/End: Original strand, 4482554 - 4482598
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagt 281  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||    
T  4482554 cctagtggctagagctcacacaatttaattgtggagaagtggagt 4482598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 274
Target Start/End: Original strand, 4553503 - 4553539
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaa 274  Q
    |||||||||||||||||||||| ||||||||||||||    
T  4553503 ctagtggttagagctcacacaatttaattgtggagaa 4553539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 7491874 - 7491838
Alignment:
Q  238 cctagtggttagagctcacacaattaattgtggagaa 274  Q
    |||||||| |||||||||||||||||| |||||||||    
T  7491874 cctagtggctagagctcacacaattaaatgtggagaa 7491838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 7961823 - 7961783
Alignment:
Q  232 aaataacctagtggttagagctcacacaa-ttaattgtgga 271  Q
    ||||| ||||||||||||||||||||||| |||||||||||    
T  7961823 aaatagcctagtggttagagctcacacaatttaattgtgga 7961783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 281
Target Start/End: Complemental strand, 19011469 - 19011425
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagt 281  Q
    |||||||| |||||||||||||||| |||||||||||| ||||||    
T  19011469 cctagtggctagagctcacacaattaaattgtggagaagtggagt 19011425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 23991221 - 23991257
Alignment:
Q  238 cctagtggttagagctcacacaattaattgtggagaa 274  Q
    |||||||| |||||||||||||||||| |||||||||    
T  23991221 cctagtggctagagctcacacaattaaatgtggagaa 23991257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 25999963 - 25999919
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||    
T  25999963 ctagtggctagagctcacacaatttaattgtggagaagtggagtg 25999919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Original strand, 27642684 - 27642728
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||    
T  27642684 ctagtggctagagctcacacaatttaattgtggagaagtggagtg 27642728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 281
Target Start/End: Original strand, 32970757 - 32970801
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagt 281  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||    
T  32970757 cctagtggctagagctcacacaatttaattgtggagaagtggagt 32970801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 36666533 - 36666569
Alignment:
Q  238 cctagtggttagagctcacacaattaattgtggagaa 274  Q
    |||| ||| ||||||||||||||||||||||||||||    
T  36666533 cctaatggctagagctcacacaattaattgtggagaa 36666569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 41620492 - 41620456
Alignment:
Q  238 cctagtggttagagctcacacaattaattgtggagaa 274  Q
    |||||||| |||||||||||||||||| |||||||||    
T  41620492 cctagtggctagagctcacacaattaaatgtggagaa 41620456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 282
Target Start/End: Original strand, 42458156 - 42458204
Alignment:
Q  235 taacctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    ||||||||||| ||||| |||||||||| |||||||||||| |||||||    
T  42458156 taacctagtggctagagttcacacaattaaattgtggagaagtggagtg 42458204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 282
Target Start/End: Complemental strand, 44019385 - 44019345
Alignment:
Q  243 tggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    |||||||||||||||||||| |||||||||||| |||||||    
T  44019385 tggttagagctcacacaattaaattgtggagaagtggagtg 44019345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 45416135 - 45416171
Alignment:
Q  238 cctagtggttagagctcacacaattaattgtggagaa 274  Q
    |||||||||||||| |||||||||||| |||||||||    
T  45416135 cctagtggttagagttcacacaattaaatgtggagaa 45416171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000003; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 274
Target Start/End: Original strand, 3949035 - 3949074
Alignment:
Q  235 taacctagtggttagagctcacacaattaattgtggagaa 274  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  3949035 taacctagtggctagagctcacacaattaattgtggagaa 3949074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 274
Target Start/End: Original strand, 20894658 - 20894692
Alignment:
Q  240 tagtggttagagctcacacaattaattgtggagaa 274  Q
    |||||||||||||||||||||||||||||||||||    
T  20894658 tagtggttagagctcacacaattaattgtggagaa 20894692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 94467 - 94512
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||    
T  94467 cctagtggttagagctcacacaatttaattgtggagaagtggagtg 94512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 11876000 - 11875955
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||    
T  11876000 cctagtggttagagctcacacaatttaattgtggagaagtggagtg 11875955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 11891007 - 11890962
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||    
T  11891007 cctagtggttagagctcacacaatttaattgtggagaagtggagtg 11890962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 14876558 - 14876603
Alignment:
Q  238 cctagtggttagagctcacacaatta-attgtggagaattggagtg 282  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||    
T  14876558 cctagtggttagagctcacacaattatattgtggagaagtggagtg 14876603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 34413176 - 34413131
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||    
T  34413176 cctagtggttagagctcacacaatttaattgtggagaagtggagtg 34413131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 274
Target Start/End: Original strand, 1632393 - 1632433
Alignment:
Q  235 taacctagtggttagagctcacacaa-ttaattgtggagaa 274  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  1632393 taacctagtggttagagctcacacaatttaattgtggagaa 1632433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 15856463 - 15856499
Alignment:
Q  238 cctagtggttagagctcacacaattaattgtggagaa 274  Q
    ||||||||||||||||||||||||||| |||||||||    
T  15856463 cctagtggttagagctcacacaattaaatgtggagaa 15856499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 22274568 - 22274604
Alignment:
Q  238 cctagtggttagagctcacacaattaattgtggagaa 274  Q
    |||||||| ||||||||||||||||||||||||||||    
T  22274568 cctagtggctagagctcacacaattaattgtggagaa 22274604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 1337065 - 1337116
Alignment:
Q  232 aaataacctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||| |||||||| |||||||||||||| |||||||||||||| |||||||    
T  1337065 aaatagcctagtggctagagctcacacaatttaattgtggagaagtggagtg 1337116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 241 - 279
Target Start/End: Complemental strand, 38402361 - 38402323
Alignment:
Q  241 agtggttagagctcacacaattaattgtggagaattgga 279  Q
    ||||||||||||||||||||||||||||| |||| ||||    
T  38402361 agtggttagagctcacacaattaattgtgaagaagtgga 38402323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 2787037 - 2787082
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  2787037 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 2787082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 7816517 - 7816472
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  7816517 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 7816472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 8265382 - 8265337
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||    
T  8265382 cctagtggctagagctcacacaattaaattgtggagaagtggagtg 8265337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 9187179 - 9187224
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  9187179 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 9187224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 10736830 - 10736875
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  10736830 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 10736875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 11787265 - 11787220
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||||||||||||||| || |||||||||||||| |||||||    
T  11787265 cctagtggttagagctcacataatttaattgtggagaagtggagtg 11787220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 16449239 - 16449194
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||    
T  16449239 cctagtggctagagctcacacaattaaattgtggagaagtggagtg 16449194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 17698636 - 17698591
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  17698636 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 17698591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 23858311 - 23858266
Alignment:
Q  238 cctagtggttagagctcacacaattaa-ttgtggagaattggagtg 282  Q
    |||||||| |||| ||||||||||||| ||||||||||||||||||    
T  23858311 cctagtggctagaactcacacaattaaattgtggagaattggagtg 23858266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 28909579 - 28909534
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  28909579 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 28909534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 29514740 - 29514695
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  29514740 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 29514695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 282
Target Start/End: Complemental strand, 29716970 - 29716929
Alignment:
Q  242 gtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||||||||||||||| |||||||||||||| |||||||    
T  29716970 gtggttagagctcacacaatttaattgtggagaagtggagtg 29716929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 31450913 - 31450958
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  31450913 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 31450958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 32719564 - 32719609
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||||||||||||||||||| ||||||||||| || |||||||    
T  32719564 cctagtggttagagctcacacaatttaattgtggaaaagtggagtg 32719609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 33838438 - 33838393
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  33838438 cctagtggctagagctcacacaatttaattgtggagaaatggagtg 33838393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 34266126 - 34266081
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  34266126 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 34266081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 37717477 - 37717432
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  37717477 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 37717432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 38219524 - 38219569
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  38219524 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 38219569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 39587661 - 39587616
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  39587661 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 39587616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 43085179 - 43085224
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||    
T  43085179 cctagtggttagagcttacacaatttaattgtggagaagtggagtg 43085224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 43186967 - 43186922
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  43186967 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 43186922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 43856338 - 43856383
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    ||||||||||||||||| ||||||| |||||||||||| |||||||    
T  43856338 cctagtggttagagctctcacaattaaattgtggagaagtggagtg 43856383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 2792892 - 2792848
Alignment:
Q  239 ctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    ||||||||| |||||||||||||| |||||||||||| |||||||    
T  2792892 ctagtggttggagctcacacaattaaattgtggagaagtggagtg 2792848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 5333029 - 5332985
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||    
T  5333029 ctagtggctagagctcacacaatttaattgtggagaagtggagtg 5332985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Original strand, 6942488 - 6942532
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||    
T  6942488 ctagtggctagagctcacacaatttaattgtggagaagtggagtg 6942532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 11491910 - 11491866
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||    
T  11491910 ctagtggctagagctcacacaatttaattgtggagaagtggagtg 11491866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Original strand, 13647414 - 13647458
Alignment:
Q  239 ctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||||| |||||||||||| |||||||    
T  13647414 ctagtggctagagctcacacaattaaattgtggagaagtggagtg 13647458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Original strand, 13747839 - 13747883
Alignment:
Q  239 ctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||||| |||||||||||| |||||||    
T  13747839 ctagtggctagagctcacacaattaaattgtggagaagtggagtg 13747883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 25812166 - 25812202
Alignment:
Q  238 cctagtggttagagctcacacaattaattgtggagaa 274  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  25812166 cctagtggttagagctcacacaattaaatgttgagaa 25812202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 34472410 - 34472366
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||||||||||||||||| ||||||||||| || |||||||    
T  34472410 ctagtggttagagctcacacaatttaattgtggaaaagtggagtg 34472366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Original strand, 37535456 - 37535500
Alignment:
Q  239 ctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    ||||||||||||| |||||||||| |||||||||||| |||||||    
T  37535456 ctagtggttagagttcacacaattaaattgtggagaaatggagtg 37535500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 38344162 - 38344118
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||    
T  38344162 ctagtggctagagctcacacaatttaattgtggagaagtggagtg 38344118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Original strand, 43283923 - 43283967
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||    
T  43283923 ctagtggctagagctcacacaatttaattgtggagaaatggagtg 43283967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 43847048 - 43847012
Alignment:
Q  238 cctagtggttagagctcacacaattaattgtggagaa 274  Q
    |||||||| |||||||||||||||||| |||||||||    
T  43847048 cctagtggctagagctcacacaattaaatgtggagaa 43847012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 35796079 - 35796037
Alignment:
Q  236 aacctagtggttagagctcacacaattaattgtggagaattgg 278  Q
    |||||||||||||||||| |||||||||| |||||||||||||    
T  35796079 aacctagtggttagagcttacacaattaaatgtggagaattgg 35796037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 232 - 272
Target Start/End: Original strand, 17967568 - 17967609
Alignment:
Q  232 aaataacctagtggttagagctcacacaa-ttaattgtggag 272  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  17967568 aaataacctagtggttagagctcacacaatttaattgtggag 17967609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 282
Target Start/End: Original strand, 6518729 - 6518777
Alignment:
Q  235 taacctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||||||| |||||||||||||| |||||||||||||| |||||||    
T  6518729 taacctagtggctagagctcacacaatttaattgtggagaagtggagtg 6518777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 282
Target Start/End: Complemental strand, 42320434 - 42320386
Alignment:
Q  235 taacctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||||||| |||||||||||||| |||||||||||||| |||||||    
T  42320434 taacctagtggctagagctcacacaatttaattgtggagaagtggagtg 42320386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 274
Target Start/End: Complemental strand, 29045989 - 29045946
Alignment:
Q  232 aaataacctagtggttagagctcacacaatt-aattgtggagaa 274  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||    
T  29045989 aaatagcctagtggttagagctcacacaattaaattgtggagaa 29045946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 274
Target Start/End: Original strand, 33735975 - 33736009
Alignment:
Q  240 tagtggttagagctcacacaattaattgtggagaa 274  Q
    |||||| ||||||||||||||||||||||||||||    
T  33735975 tagtggctagagctcacacaattaattgtggagaa 33736009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 2301527 - 2301572
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  2301527 cctagtggctagagctcacacaatttaattgtggagaaatggagtg 2301572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 4745832 - 4745877
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  4745832 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 4745877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 8968863 - 8968818
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  8968863 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 8968818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 9835147 - 9835102
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  9835147 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 9835102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 10404241 - 10404196
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  10404241 cctagtggctagagctcacacaatttaattgtggagaaatggagtg 10404196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 11146485 - 11146530
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    ||||||||||||||||||||||||| || ||||||||| |||||||    
T  11146485 cctagtggttagagctcacacaattgaactgtggagaagtggagtg 11146530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 11795607 - 11795562
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  11795607 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 11795562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 12463870 - 12463825
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  12463870 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 12463825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 21749334 - 21749379
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  21749334 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 21749379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 22569201 - 22569246
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||    
T  22569201 cctagtggctagagctcacacaattaaattgtggagaaatggagtg 22569246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 25400323 - 25400368
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  25400323 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 25400368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 25648040 - 25648085
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  25648040 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 25648085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 27765371 - 27765326
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  27765371 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 27765326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 281
Target Start/End: Complemental strand, 40081993 - 40081948
Alignment:
Q  237 acctagtggttagagctcacacaa-ttaattgtggagaattggagt 281  Q
    ||||||||| |||||||||||||| |||||||||||||| ||||||    
T  40081993 acctagtggctagagctcacacaatttaattgtggagaagtggagt 40081948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 282
Target Start/End: Complemental strand, 988831 - 988783
Alignment:
Q  235 taacctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||||||  ||||||||||||| |||||||||||||| |||||||    
T  988831 taacctagtggccagagctcacacaatttaattgtggagaagtggagtg 988783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Original strand, 11786017 - 11786061
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||    
T  11786017 ctagtggctagagctcacacaatttaattgtggagaagtggagtg 11786061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 11897361 - 11897317
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||    
T  11897361 ctagtggctagagctcacacaatttaattgtggagaagtggagtg 11897317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 16891459 - 16891415
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||    
T  16891459 ctagtggctagagctcacacaatttaattgtggagaagtggagtg 16891415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 18638711 - 18638667
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||    
T  18638711 ctagtggctagagctcacacaatttaattgtggagaagtggagtg 18638667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 20719858 - 20719810
Alignment:
Q  232 aaataacctagtggttagagctcacacaa-ttaattgtggagaattgga 279  Q
    ||||| ||||||||||||||||||||||| ||||||| |||||| ||||    
T  20719858 aaatagcctagtggttagagctcacacaatttaattgcggagaagtgga 20719810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 34208487 - 34208451
Alignment:
Q  238 cctagtggttagagctcacacaattaattgtggagaa 274  Q
    |||||||| |||| |||||||||||||||||||||||    
T  34208487 cctagtggctagaactcacacaattaattgtggagaa 34208451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 36124512 - 36124468
Alignment:
Q  239 ctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    ||||||||||||||||||||| || |||||||||||| |||||||    
T  36124512 ctagtggttagagctcacacagttaaattgtggagaagtggagtg 36124468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Original strand, 39886169 - 39886213
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||    
T  39886169 ctagtggctagagctcacacaatttaattgtggagaagtggagtg 39886213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Original strand, 41319408 - 41319452
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||    
T  41319408 ctagtggctagagctcacacaatttaattgtggagaagtggagtg 41319452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 42525513 - 42525469
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||    
T  42525513 ctagtggctagagctcacacaatttaattgtggagaagtggagtg 42525469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 43580991 - 43580947
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||    
T  43580991 ctagtggctagagctcacacaatttaattgtggagaagtggagtg 43580947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000004; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 3766925 - 3766880
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||    
T  3766925 cctagtggttagagctcacacaatttaattgtggagaagtggagtg 3766880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 44616715 - 44616671
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||||||||||||||||| |||||||||||||| |||||||    
T  44616715 ctagtggttagagctcacacaatttaattgtggagaagtggagtg 44616671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 274
Target Start/End: Original strand, 12007753 - 12007788
Alignment:
Q  239 ctagtggttagagctcacacaattaattgtggagaa 274  Q
    ||||||||| ||||||||||||||||||||||||||    
T  12007753 ctagtggttggagctcacacaattaattgtggagaa 12007788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 238 - 281
Target Start/End: Complemental strand, 27424952 - 27424909
Alignment:
Q  238 cctagtggttagagctcacacaattaattgtggagaattggagt 281  Q
    |||||||| |||||||||||||||||| ||||||||| ||||||    
T  27424952 cctagtggctagagctcacacaattaaatgtggagaagtggagt 27424909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 2527380 - 2527338
Alignment:
Q  233 aataacctagtggttagagctcacacaa-ttaattgtggagaa 274  Q
    |||| ||||||||||||||||||||||| ||||||||||||||    
T  2527380 aatagcctagtggttagagctcacacaatttaattgtggagaa 2527338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 237 - 282
Target Start/End: Original strand, 30388462 - 30388508
Alignment:
Q  237 acctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||||| |||||||||||||| |||||||||||||| |||||||    
T  30388462 acctagtggctagagctcacacaatttaattgtggagaagtggagtg 30388508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 3062888 - 3062843
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  3062888 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 3062843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 4960898 - 4960853
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  4960898 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 4960853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 282
Target Start/End: Original strand, 7778948 - 7778997
Alignment:
Q  233 aataacctagtggttagagctcacacaattaattgtggagaattggagtg 282  Q
    |||||| |||||| |||| ||||||||||||| ||||||||| |||||||    
T  7778948 aataacttagtggctagaactcacacaattaaatgtggagaagtggagtg 7778997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 7836888 - 7836929
Alignment:
Q  233 aataacctagtggttagagctcacacaattaattgtggagaa 274  Q
    |||| |||||||| |||||||||||||||||| |||||||||    
T  7836888 aatagcctagtggctagagctcacacaattaaatgtggagaa 7836929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 12264168 - 12264123
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  12264168 cctagtggatagagctcacacaatttaattgtggagaagtggagtg 12264123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 12640545 - 12640590
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  12640545 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 12640590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 19331456 - 19331501
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||    
T  19331456 cctagtggctagagctcacacaattaaattgtggagaagtggagtg 19331501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 27510213 - 27510258
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  27510213 cctagtggctagagctcacacaatttaattgtggagaaatggagtg 27510258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 28547737 - 28547782
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  28547737 cctagtggctagagctcacacaatttaattgtggagaaatggagtg 28547782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 29617519 - 29617474
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  29617519 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 29617474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 31026333 - 31026288
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  31026333 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 31026288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 31727748 - 31727793
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    |||||||||| |||||||||||||| |||||||||||| |||||||    
T  31727748 cctagtggtttgagctcacacaattaaattgtggagaagtggagtg 31727793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 32619464 - 32619419
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  32619464 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 32619419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 35645713 - 35645668
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  35645713 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 35645668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 35950242 - 35950197
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  35950242 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 35950197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 38889449 - 38889494
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||    
T  38889449 cctagtggatagagctcacacaattaaattgtggagaagtggagtg 38889494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 41331031 - 41331072
Alignment:
Q  233 aataacctagtggttagagctcacacaattaattgtggagaa 274  Q
    |||| ||||||||||| ||||||||||||||| |||||||||    
T  41331031 aatagcctagtggttaaagctcacacaattaaatgtggagaa 41331072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 42443803 - 42443758
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  42443803 cctagtggctagagctcacacaacttaattgtggagaagtggagtg 42443758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 43633046 - 43633091
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  43633046 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 43633091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 48119584 - 48119539
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||    
T  48119584 cctagtggctagagctcacacaattaaattgtggagaagtggagtg 48119539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 48719913 - 48719868
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||    
T  48719913 cctagtggctagagctcacacaattaaattgtggagaagtggagtg 48719868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 282
Target Start/End: Complemental strand, 3524258 - 3524218
Alignment:
Q  243 tggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  3524258 tggttagagctcacacaatttaattgtgaagaattggagtg 3524218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 3529893 - 3529849
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||    
T  3529893 ctagtggctagagctcacacaatttaattgtggagaaatggagtg 3529849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 4611351 - 4611315
Alignment:
Q  238 cctagtggttagagctcacacaattaattgtggagaa 274  Q
    |||| ||| ||||||||||||||||||||||||||||    
T  4611351 cctaatggctagagctcacacaattaattgtggagaa 4611315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Original strand, 7401344 - 7401388
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||    
T  7401344 ctagtggctagagctcacacaatttaattgtggagaagtggagtg 7401388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 274
Target Start/End: Complemental strand, 7525561 - 7525521
Alignment:
Q  235 taacctagtggttagagctcacacaa-ttaattgtggagaa 274  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  7525561 taacctagtggctagagctcacacaatttaattgtggagaa 7525521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 274
Target Start/End: Complemental strand, 12615864 - 12615828
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaa 274  Q
    |||||||||||||||||||||| ||||||||||||||    
T  12615864 ctagtggttagagctcacacaatttaattgtggagaa 12615828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 12935853 - 12935817
Alignment:
Q  238 cctagtggttagagctcacacaattaattgtggagaa 274  Q
    |||||||| |||||||||||||||||| |||||||||    
T  12935853 cctagtggctagagctcacacaattaaatgtggagaa 12935817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Original strand, 24061286 - 24061330
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||    
T  24061286 ctagtggctagagctcacacaatttaattgtggagaagtggagtg 24061330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 281
Target Start/End: Complemental strand, 24781144 - 24781100
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagt 281  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||    
T  24781144 cctagtggctagagctcacacaatttaattgtggagaagtggagt 24781100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Original strand, 31077860 - 31077904
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||    
T  31077860 ctagtggctagagctcacacaatttaattgtggagaagtggagtg 31077904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 32750129 - 32750085
Alignment:
Q  238 cctagtggttagagctcacacaattaattgtggagaattggagtg 282  Q
    |||| ||| |||||||||||||||||||| ||||||| |||||||    
T  32750129 cctaatggctagagctcacacaattaattatggagaagtggagtg 32750085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 47194381 - 47194417
Alignment:
Q  238 cctagtggttagagctcacacaattaattgtggagaa 274  Q
    |||||||| |||| |||||||||||||||||||||||    
T  47194381 cctagtggctagaactcacacaattaattgtggagaa 47194417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Original strand, 48269343 - 48269387
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||    
T  48269343 ctagtggctagagctcacacaatttaattgtggagaagtggagtg 48269387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000004; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 10349514 - 10349469
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||    
T  10349514 cctagtggttagagctcacacaatttaattgtggagaagtggagtg 10349469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 282
Target Start/End: Complemental strand, 44764838 - 44764789
Alignment:
Q  233 aataacctagtggttagagctcacacaattaattgtggagaattggagtg 282  Q
    |||| |||||||| |||||||||||||||||| ||||||||| |||||||    
T  44764838 aatagcctagtggctagagctcacacaattaaatgtggagaagtggagtg 44764789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 282
Target Start/End: Complemental strand, 52946011 - 52945963
Alignment:
Q  235 taacctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    ||||||||||||||||||||| |||||| |||||||||||| |||||||    
T  52946011 taacctagtggttagagctcatacaattaaattgtggagaagtggagtg 52945963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 274
Target Start/End: Complemental strand, 29531326 - 29531291
Alignment:
Q  239 ctagtggttagagctcacacaattaattgtggagaa 274  Q
    |||||||||||||||||||||||||| |||||||||    
T  29531326 ctagtggttagagctcacacaattaaatgtggagaa 29531291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 40910130 - 40910181
Alignment:
Q  232 aaataacctagtggttagagctcacacaat-taattgtggagaattggagtg 282  Q
    ||||| |||||||| ||||||||||||||| ||||||||||||| |||||||    
T  40910130 aaatagcctagtggctagagctcacacaatataattgtggagaagtggagtg 40910181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 282
Target Start/End: Original strand, 31327669 - 31327719
Alignment:
Q  233 aataacctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||| |||||| |||||||||||||| |||||||||||||| |||||||    
T  31327669 aataacatagtggctagagctcacacaatttaattgtggagaagtggagtg 31327719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 2007039 - 2007084
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  2007039 cctagtggatagagctcacacaatttaattgtggagaagtggagtg 2007084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 2523040 - 2522995
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  2523040 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 2522995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 4139114 - 4139069
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  4139114 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 4139069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 6488238 - 6488193
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||    
T  6488238 cctagtggctagagctcacacaattaaattgtggagaagtggagtg 6488193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 6919919 - 6919964
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  6919919 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 6919964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 7270069 - 7270024
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  7270069 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 7270024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 8964732 - 8964777
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  8964732 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 8964777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 10482809 - 10482854
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  10482809 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 10482854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 15975266 - 15975221
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||||||||||||||||||| ||||||||| |||| |||||||    
T  15975266 cctagtggttagagctcacacaatttaattgtgaagaagtggagtg 15975221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 15975364 - 15975409
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||||||||||||||||||| |||||| ||||||| |||||||    
T  15975364 cctagtggttagagctcacacaatttaattatggagaagtggagtg 15975409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 17218602 - 17218557
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||    
T  17218602 cctagtggctagagctcacacaattaaattgtggagaagtggagtg 17218557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 281
Target Start/End: Original strand, 17472289 - 17472330
Alignment:
Q  241 agtggttagagctcacacaatt-aattgtggagaattggagt 281  Q
    ||||| |||||||||||||||| |||||||||||||||||||    
T  17472289 agtggctagagctcacacaatttaattgtggagaattggagt 17472330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 18194452 - 18194407
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  18194452 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 18194407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 22501887 - 22501932
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||    
T  22501887 cctagtggctagagctcacacaattaaattgtggagaagtggagtg 22501932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 24303508 - 24303467
Alignment:
Q  233 aataacctagtggttagagctcacacaattaattgtggagaa 274  Q
    |||| |||||||| |||||||||||||||||| |||||||||    
T  24303508 aatagcctagtggctagagctcacacaattaaatgtggagaa 24303467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 30555183 - 30555228
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  30555183 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 30555228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 32429861 - 32429824
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaa 274  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  32429861 cctagtggttagagctcacacaatttaattgtggagaa 32429824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 33606896 - 33606941
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||    
T  33606896 cctagtggctagagctcacacaattaaattgtggagaagtggagtg 33606941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 33706683 - 33706728
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  33706683 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 33706728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 37488416 - 37488461
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  37488416 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 37488461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 37800567 - 37800612
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  37800567 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 37800612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 40548417 - 40548372
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  40548417 cctagtggctagagctcacacaatttaattgtggagaaatggagtg 40548372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 40933787 - 40933832
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  40933787 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 40933832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 44626149 - 44626104
Alignment:
Q  238 cctagtggttagagctcacacaat-taattgtggagaattggagtg 282  Q
    |||||||| ||||||||||||||| ||||||||||||| |||||||    
T  44626149 cctagtggctagagctcacacaatataattgtggagaagtggagtg 44626104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 45551765 - 45551810
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  45551765 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 45551810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 48251686 - 48251641
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  48251686 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 48251641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 50234238 - 50234193
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  50234238 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 50234193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 50496770 - 50496815
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  50496770 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 50496815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 53578069 - 53578024
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  53578069 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 53578024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 3894657 - 3894613
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||    
T  3894657 ctagtggctagagctcacacaatttaattgtggagaagtggagtg 3894613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 274
Target Start/End: Complemental strand, 4860274 - 4860238
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaa 274  Q
    |||||||||||||||||||||| ||||||||||||||    
T  4860274 ctagtggttagagctcacacaatttaattgtggagaa 4860238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 274
Target Start/End: Complemental strand, 4880282 - 4880246
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaa 274  Q
    |||||||||||||||||||||| ||||||||||||||    
T  4880282 ctagtggttagagctcacacaatttaattgtggagaa 4880246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 5173967 - 5174003
Alignment:
Q  238 cctagtggttagagctcacacaattaattgtggagaa 274  Q
    |||||||| |||||||||||||||||| |||||||||    
T  5173967 cctagtggctagagctcacacaattaaatgtggagaa 5174003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 274
Target Start/End: Complemental strand, 11436621 - 11436581
Alignment:
Q  235 taacctagtggttagagctcacacaa-ttaattgtggagaa 274  Q
    |||||||||||||||| ||||||||| ||||||||||||||    
T  11436621 taacctagtggttagaactcacacaatttaattgtggagaa 11436581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 282
Target Start/End: Complemental strand, 14887347 - 14887299
Alignment:
Q  235 taacctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    ||||||||||| ||||||||| |||||| |||||||||||| |||||||    
T  14887347 taacctagtggctagagctcatacaattaaattgtggagaagtggagtg 14887299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 17729104 - 17729060
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||    
T  17729104 ctagtggctagagctcacacaatttaattgtggagaagtggagtg 17729060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 19030333 - 19030289
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||    
T  19030333 ctagtggctagagctcacacaatttaattgtggagaagtggagtg 19030289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 281
Target Start/End: Original strand, 31327457 - 31327501
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagt 281  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||    
T  31327457 cctagtggctagagctcacacaatttaattgtggagaagtggagt 31327501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 274
Target Start/End: Complemental strand, 32144701 - 32144661
Alignment:
Q  235 taacctagtggttagagctcacacaa-ttaattgtggagaa 274  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  32144701 taacctagtggctagagctcacacaatttaattgtggagaa 32144661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Original strand, 38819281 - 38819325
Alignment:
Q  239 ctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||||| |||||||||||| |||||||    
T  38819281 ctagtggctagagctcacacaattaaattgtggagaagtggagtg 38819325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 274
Target Start/End: Original strand, 45512952 - 45512988
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaa 274  Q
    |||||||||||||||||||||| ||||||||||||||    
T  45512952 ctagtggttagagctcacacaatttaattgtggagaa 45512988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 281
Target Start/End: Complemental strand, 45701458 - 45701414
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagt 281  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||    
T  45701458 cctagtggctagagctcacacaatttaattgtggagaagtggagt 45701414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Original strand, 52410198 - 52410242
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||    
T  52410198 ctagtggctagagctcacacaatttaattgtggagaagtggagtg 52410242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 22574983 - 22574939
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||||||||||||||||| |||||||||||||| |||||||    
T  22574983 ctagtggttagagctcacacaatttaattgtggagaagtggagtg 22574939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 24319126 - 24319082
Alignment:
Q  238 cctagtggttagagctcacacaattaattgtggagaattggagtg 282  Q
    |||| ||| |||||||||||||||||||||||||||| |||||||    
T  24319126 cctaatggctagagctcacacaattaattgtggagaagtggagtg 24319082  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 216320 - 216283
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaa 274  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  216320 cctagtggttagagctcacacaatttaattgtggagaa 216283  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 3794129 - 3794174
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  3794129 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 3794174  T

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Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 3795730 - 3795775
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||    
T  3795730 cctagtggctagagctcacacaattaaattgtggagaagtggagtg 3795775  T

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Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 7207958 - 7207913
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  7207958 cctagtggctagagctcacacaatttaattgtggagaaatggagtg 7207913  T

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Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 7328603 - 7328648
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  7328603 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 7328648  T

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Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 8297741 - 8297704
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaa 274  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  8297741 cctagtggttagagctcacacaatttaattgtggagaa 8297704  T

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Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 9888481 - 9888526
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||||||||||||||| || |||||||||||||| |||||||    
T  9888481 cctagtggttagagctcacataatttaattgtggagaagtggagtg 9888526  T

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Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 10517313 - 10517268
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  10517313 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 10517268  T

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Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 17441795 - 17441840
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  17441795 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 17441840  T

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Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 19953784 - 19953829
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  19953784 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 19953829  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 27218998 - 27218953
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  27218998 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 27218953  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 28148689 - 28148734
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  28148689 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 28148734  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 28222976 - 28222931
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||||||||||||||||||| |||||| ||||||| |||||||    
T  28222976 cctagtggttagagctcacacaatttaattatggagaagtggagtg 28222931  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 32166483 - 32166438
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||    
T  32166483 cctagtggctagagctcacacaattaaattgtggagaagtggagtg 32166438  T

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Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 32611510 - 32611555
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  32611510 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 32611555  T

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Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 33573931 - 33573886
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  33573931 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 33573886  T

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Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 3640627 - 3640583
Alignment:
Q  239 ctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||||| |||||||||||| |||||||    
T  3640627 ctagtggctagagctcacacaattaaattgtggagaagtggagtg 3640583  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 26347517 - 26347473
Alignment:
Q  239 ctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||||| |||||||||||| |||||||    
T  26347517 ctagtggctagagctcacacaattaaattgtggagaagtggagtg 26347473  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 31802166 - 31802122
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||    
T  31802166 ctagtggctagagctcacacaatttaattgtggagaagtggagtg 31802122  T

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Target: scaffold0079 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 50801 - 50844
Alignment:
Q  239 ctagtggttagagctcacacaatt-aattgtggagaattggagt 281  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  50801 ctagtggttagagctcacacaattaaattgtggagaaatggagt 50844  T

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Target: scaffold0690 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 3780 - 3735
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  3780 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 3735  T

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Target: scaffold0445 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 3970 - 4015
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||    
T  3970 cctagtggctagagctcacacaattaaattgtggagaagtggagtg 4015  T

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Target: scaffold0179 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 6091 - 6046
Alignment:
Q  238 cctagtggttagagctcacacaatt-aattgtggagaattggagtg 282  Q
    ||||||||||||||||||||||||| ||||||| |||| |||||||    
T  6091 cctagtggttagagctcacacaattaaattgtgaagaagtggagtg 6046  T

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Target: scaffold0128 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 17734 - 17689
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  17734 cctagtggctagagctcacacaatttaattgtggagaagtggagtg 17689  T

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Target: scaffold0038 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 23474 - 23429
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||||||||||||||||||| |||||| ||||||| |||||||    
T  23474 cctagtggttagagctcacacaatttaattatggagaagtggagtg 23429  T

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Target: scaffold1185 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1185
Description:

Target: scaffold1185; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 281
Target Start/End: Original strand, 2349 - 2393
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagt 281  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||    
T  2349 cctagtggctagagctcacacaatttaattgtggagaagtggagt 2393  T

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Target: scaffold0608 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 281
Target Start/End: Complemental strand, 9080 - 9036
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagt 281  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||    
T  9080 cctagtggctagagctcacacaatttaattgtggagaagtggagt 9036  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 281
Target Start/End: Complemental strand, 112222 - 112178
Alignment:
Q  238 cctagtggttagagctcacacaa-ttaattgtggagaattggagt 281  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||    
T  112222 cctagtggctagagctcacacaatttaattgtggagaagtggagt 112178  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 59896 - 59852
Alignment:
Q  239 ctagtggttagagctcacacaa-ttaattgtggagaattggagtg 282  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||    
T  59896 ctagtggctagagctcacacaatttaattgtggagaagtggagtg 59852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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