View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3010_low_9 (Length: 250)
Name: NF3010_low_9
Description: NF3010
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3010_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 26969771 - 26970014
Alignment:
| Q |
1 |
catgttgttcttttgttacactgattt-cttcaacgtgtcttggttgttttgatgccatttgaagaagaagaattaatgtagctttagtttttgttgtgt |
99 |
Q |
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| T |
26969771 |
catgttgttcttttgtta-actgattttcttcaacgtgtcttggttgttttgatcccatttgaagaagaagaattaatgtagctttagtttttgttgtgt |
26969869 |
T |
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| Q |
100 |
ttttcttttctagtaagataagattgaaatgaaatgagcttgtttactaagttttgttgtagagtatagaacctatatataagtgacaacttcccatata |
199 |
Q |
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| T |
26969870 |
gtttcttttctagtaagataagattgaaatgaaatgagcttgtttactaagttttgttgtagagtatagaacctatatataagtgacaacttcccatata |
26969969 |
T |
|
| Q |
200 |
taaatatacgaattgtgctagtgctcaaggttatatattcttcga |
244 |
Q |
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| T |
26969970 |
taaatatacgaattgtgctagtgctcaaggttatatattattcga |
26970014 |
T |
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