View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3011_high_32 (Length: 254)
Name: NF3011_high_32
Description: NF3011
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3011_high_32 |
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Alignment Details
Target: chr2 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 43921145 - 43920906
Alignment:
| Q |
1 |
actagtagtttctttgatctacacagtaagtactctctttcattttacaaatttcatcattttctgcaacttctacaaaatatttttcaacttattagta |
100 |
Q |
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| T |
43921145 |
actagtagtttctttgatctacacagtaagtactctctttcattttacaaatttcatcattttctgcaacttctacaaaatattttgcaacttattagta |
43921046 |
T |
|
| Q |
101 |
tgtcaagaccggggaataagatcattcaagccaagctggtaggtatgtcttaccttattactaaattttgtttttgtgttccagataccagtcannnnnn |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
43921045 |
tgtcaagaccggggaataagatcattcaagccaagctggtaggtatgtcttaccttattactaaattttgtttttttgttccagataccagtcatttttt |
43920946 |
T |
|
| Q |
201 |
natgaatatgtacttgatcttcttctatcaagttattatt |
240 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
43920945 |
tatgaatatgtacttgatcttcttctatcaagttattatt |
43920906 |
T |
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