View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3011_low_14 (Length: 383)
Name: NF3011_low_14
Description: NF3011
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3011_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 17 - 240
Target Start/End: Complemental strand, 4709472 - 4709249
Alignment:
| Q |
17 |
agcaattgatgttgattatatatgtttgtccaattactactgcaagaaaatggcatatgccaacggaggtttatagtgacggattttaaatcgtaggtat |
116 |
Q |
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| T |
4709472 |
agcaattgatgttgattatatatgtttgtccaattactactgcaagaaaatggcatatgccaacggaggtttatagtgacggattttaaatagtaggtat |
4709373 |
T |
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| Q |
117 |
agaaaagctatacctatggagaaaagtattagtcgtaggtatagttaacccaaaaattaaaacaatcaaatacattcgaagtagataaggtcacccagtg |
216 |
Q |
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| T |
4709372 |
agaaaagctatacctatggagaaaagtattagtcgtaggtatagttaacccaaaaattaaaacaatcaaatacatttgaagtatataaggtcgcccagtg |
4709273 |
T |
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| Q |
217 |
aaatgttaacaccgccaaaacaca |
240 |
Q |
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|||||||||||||||||||||||| |
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| T |
4709272 |
aaatgttaacaccgccaaaacaca |
4709249 |
T |
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