View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3013_high_29 (Length: 239)
Name: NF3013_high_29
Description: NF3013
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3013_high_29 |
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Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 19150869 - 19150655
Alignment:
| Q |
4 |
tgaaagtaatgtgttaggttatgtatgttacacgtctatatgataatgataatgagaattgtttgggccattgaggcaccacacaacttgtccccaatag |
103 |
Q |
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| T |
19150869 |
tgaaagtaatgtgttaggttatgtatgttacacgtctatatgataatgataatgagaattgtttgggccattgaggcaccacacaacttgtccccaatag |
19150770 |
T |
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| Q |
104 |
tatgcactttctaaggtaccttgtacatagatttttgggtggaaataatgccaccttacattatatacaattctggaaagttaggtcaaagaaagctatc |
203 |
Q |
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| T |
19150769 |
tatgcactttctaaggtaccttgtacatagatttttgggtggaaataatgccaccttacattatatacaattctggaaagttaggtcaaagaaagctatc |
19150670 |
T |
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| Q |
204 |
ttgaatttactactc |
218 |
Q |
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||||||||||||||| |
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| T |
19150669 |
ttgaatttactactc |
19150655 |
T |
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